Sed0028001 (gene) Chayote v1

Overview


Name	Sed0028001
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Elongation factor Tu
Location	LG12: 34379571 .. 34381616 (-)
RNA-Seq Expression	Sed0028001
Synteny	Sed0028001

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGATTTGAAAAATGATTAGTAAACTCCAACCATACACAAACGTAGCCCTAATTTTTGAAGCAGCAGCACAGAGAGTCCATGATACCATAGGTAACGAAAACTAGTGATGGCAAAGAACTATGGCGCTGACAGAAATGGATAGAACAGCCATTTGAGGTCCAATTTTATCTTCCCATTTCTACAAGATAACGCTCCATTTCTCCCTCAAAATCCATCCCTTCTTCCCCAAATTCCTCTCCCAAATCCCTCTTCAATGGCCGCCATTTCCTTAGCTTCCACTTCCTCTAAGCTCAATTTCCCACACCCCTCTTCTTCTTCCTTCGCAAAACCCTCTTCTGTTACAAATCTCTCTTCCCCTTTCTTAAACCCTTCCTCCATCCGCCCTTTAACCTTCTCCTCTTCCAATTCCGCCACTGTAACCCGTCCTCGTTCCTTCACAGTCCGCGCCGCTCGTGGGAAATTCGAAAGGAAGAAACCCCATGTCAACATCGGCACCATTGGCCATGTCGACCATGGCAAAACCACGCTTACAGCAGCATTAACCATGGCCTTGAGCAAAGCCCCGAAGAAATACGACGAAATCGACGCCGCCCCCGAAGAGCGGGCTCGGGGTATCACCATTAACACCGCCACGGTCGAGTACGAGACCGAGACCCGGCATTACGCCCATGTGGATTGCCCTGGCCATGCTGATTATGTCAAGAACATGATTACGGGTGCTGCTCAAATGGACGGTGCGATTCTGGTCGTTTCGGGTGCGGATGGCCCAATGCCGCAGACTAAGGAGCATATTTTGTTGGCTAAGCAAGTGGGTGTTCCTAATATGGTGGTGTTTCTCAACAAGAAGGATCAAGTGGATGATAATGAGCTTTTGGAGCTTGTGGAATTGGAGATGAGGGAGTTGCTTTCTTCTTATGAATTCCCAGGTGATGATGTTCCTATTACTGCTGGTTCTGCTTTGTTAGCTTTAGAAGCTTTAATGGCTAACCCCAATATAGGTAGAGGTGAAAATGAATGGGTGGATAAGATTTTTGAACTTATGGATTCTGTTGATAGTTATATACCTATACCTGAAAGACAAACAGATCTTCCATTTTTGCTTGCTGTTGAAGATGTGTTCTCGATTACTGGTCGTGGTACGGTCGCTACCGGGCGTGTCGAAAGGGGTACGGTTCGAGTTGGAGAGACGGTGGATATTGTGGGATTGAAGGAAACTAGGAACACAACCGTCACAGGGGTGGAGATGTTTCAGAAAATTCTTGATGAGGCTTTGGCTGGAGATAATGTTGGATTGTTGCTTAGAGGTGTTCAAAAGACTGATATTCAAAGAGGGATGGTTTTGTCCAAGCCTGGCAGCATTACCCCACACACCAAGTTTTCTGCTGTTGTGTATGTGTTGAAGAAGGAAGAGGGTGGTAGGCATTCACCCTTTTTTTCCGGTTACAGACCGCAATTTTATATGAGGACTACCGATGTCACTGGTACGGTGACTTCGATCATGAATGACAAGGATGAAGAGTCGAAAATGGTTATGCCGGGTGACCGTGTGAAAATGGTTGTGCAACTGATTATGCCAGTGGCTTGTGAACAAGGAATGAGGTTTGCCATCAGAGAAGGTGGGAAGACTGTTGGAGCTGGTGTGATTCAGGCTATTATCGAGTGAGTGATAGGAAGACACAACCTTAATTGCGGAAACCAACTTTGTTACTCCATTAAGCTAGGCTAAATCTGAACCAACATCAATGATTTATTTTTTTCATTTTGTGCAACTTTTTGGATTCAACGTCATATATTTGTAGTTTTGTTATCTTGTTGGTTGGATCAGACACGTCCAGCGTGGCTGGATAATGTTTTTGTTCTTTTTTATGATGGTGTATTTGCAGATACCTTTCTTCTCCTCTGGATGCTTAGTTTGTGTAGTTTTTTCATTGAAGAATCTGCAATTATTCATTCTATTATTCCAAATCACTACTAATCTGTATTCTATATTGAGATAATTTCTTCAGTTCAAGCTGCATTCACTTCGGGACAGTCTCCGAATTCAC

mRNA sequence

TTGATTTGAAAAATGATTAGTAAACTCCAACCATACACAAACGTAGCCCTAATTTTTGAAGCAGCAGCACAGAGAGTCCATGATACCATAGGTAACGAAAACTAGTGATGGCAAAGAACTATGGCGCTGACAGAAATGGATAGAACAGCCATTTGAGGTCCAATTTTATCTTCCCATTTCTACAAGATAACGCTCCATTTCTCCCTCAAAATCCATCCCTTCTTCCCCAAATTCCTCTCCCAAATCCCTCTTCAATGGCCGCCATTTCCTTAGCTTCCACTTCCTCTAAGCTCAATTTCCCACACCCCTCTTCTTCTTCCTTCGCAAAACCCTCTTCTGTTACAAATCTCTCTTCCCCTTTCTTAAACCCTTCCTCCATCCGCCCTTTAACCTTCTCCTCTTCCAATTCCGCCACTGTAACCCGTCCTCGTTCCTTCACAGTCCGCGCCGCTCGTGGGAAATTCGAAAGGAAGAAACCCCATGTCAACATCGGCACCATTGGCCATGTCGACCATGGCAAAACCACGCTTACAGCAGCATTAACCATGGCCTTGAGCAAAGCCCCGAAGAAATACGACGAAATCGACGCCGCCCCCGAAGAGCGGGCTCGGGGTATCACCATTAACACCGCCACGGTCGAGTACGAGACCGAGACCCGGCATTACGCCCATGTGGATTGCCCTGGCCATGCTGATTATGTCAAGAACATGATTACGGGTGCTGCTCAAATGGACGGTGCGATTCTGGTCGTTTCGGGTGCGGATGGCCCAATGCCGCAGACTAAGGAGCATATTTTGTTGGCTAAGCAAGTGGGTGTTCCTAATATGGTGGTGTTTCTCAACAAGAAGGATCAAGTGGATGATAATGAGCTTTTGGAGCTTGTGGAATTGGAGATGAGGGAGTTGCTTTCTTCTTATGAATTCCCAGGTGATGATGTTCCTATTACTGCTGGTTCTGCTTTGTTAGCTTTAGAAGCTTTAATGGCTAACCCCAATATAGGTAGAGGTGAAAATGAATGGGTGGATAAGATTTTTGAACTTATGGATTCTGTTGATAGTTATATACCTATACCTGAAAGACAAACAGATCTTCCATTTTTGCTTGCTGTTGAAGATGTGTTCTCGATTACTGGTCGTGGTACGGTCGCTACCGGGCGTGTCGAAAGGGGTACGGTTCGAGTTGGAGAGACGGTGGATATTGTGGGATTGAAGGAAACTAGGAACACAACCGTCACAGGGGTGGAGATGTTTCAGAAAATTCTTGATGAGGCTTTGGCTGGAGATAATGTTGGATTGTTGCTTAGAGGTGTTCAAAAGACTGATATTCAAAGAGGGATGGTTTTGTCCAAGCCTGGCAGCATTACCCCACACACCAAGTTTTCTGCTGTTGTGTATGTGTTGAAGAAGGAAGAGGGTGGTAGGCATTCACCCTTTTTTTCCGGTTACAGACCGCAATTTTATATGAGGACTACCGATGTCACTGGTACGGTGACTTCGATCATGAATGACAAGGATGAAGAGTCGAAAATGGTTATGCCGGGTGACCGTGTGAAAATGGTTGTGCAACTGATTATGCCAGTGGCTTGTGAACAAGGAATGAGGTTTGCCATCAGAGAAGGTGGGAAGACTGTTGGAGCTGGTGTGATTCAGGCTATTATCGAGTGAGTGATAGGAAGACACAACCTTAATTGCGGAAACCAACTTTGTTACTCCATTAAGCTAGGCTAAATCTGAACCAACATCAATGATTTATTTTTTTCATTTTGTGCAACTTTTTGGATTCAACGTCATATATTTGTAGTTTTGTTATCTTGTTGGTTGGATCAGACACGTCCAGCGTGGCTGGATAATGTTTTTGTTCTTTTTTATGATGGTGTATTTGCAGATACCTTTCTTCTCCTCTGGATGCTTAGTTTGTGTAGTTTTTTCATTGAAGAATCTGCAATTATTCATTCTATTATTCCAAATCACTACTAATCTGTATTCTATATTGAGATAATTTCTTCAGTTCAAGCTGCATTCACTTCGGGACAGTCTCCGAATTCAC

Coding sequence (CDS)

ATGGCCGCCATTTCCTTAGCTTCCACTTCCTCTAAGCTCAATTTCCCACACCCCTCTTCTTCTTCCTTCGCAAAACCCTCTTCTGTTACAAATCTCTCTTCCCCTTTCTTAAACCCTTCCTCCATCCGCCCTTTAACCTTCTCCTCTTCCAATTCCGCCACTGTAACCCGTCCTCGTTCCTTCACAGTCCGCGCCGCTCGTGGGAAATTCGAAAGGAAGAAACCCCATGTCAACATCGGCACCATTGGCCATGTCGACCATGGCAAAACCACGCTTACAGCAGCATTAACCATGGCCTTGAGCAAAGCCCCGAAGAAATACGACGAAATCGACGCCGCCCCCGAAGAGCGGGCTCGGGGTATCACCATTAACACCGCCACGGTCGAGTACGAGACCGAGACCCGGCATTACGCCCATGTGGATTGCCCTGGCCATGCTGATTATGTCAAGAACATGATTACGGGTGCTGCTCAAATGGACGGTGCGATTCTGGTCGTTTCGGGTGCGGATGGCCCAATGCCGCAGACTAAGGAGCATATTTTGTTGGCTAAGCAAGTGGGTGTTCCTAATATGGTGGTGTTTCTCAACAAGAAGGATCAAGTGGATGATAATGAGCTTTTGGAGCTTGTGGAATTGGAGATGAGGGAGTTGCTTTCTTCTTATGAATTCCCAGGTGATGATGTTCCTATTACTGCTGGTTCTGCTTTGTTAGCTTTAGAAGCTTTAATGGCTAACCCCAATATAGGTAGAGGTGAAAATGAATGGGTGGATAAGATTTTTGAACTTATGGATTCTGTTGATAGTTATATACCTATACCTGAAAGACAAACAGATCTTCCATTTTTGCTTGCTGTTGAAGATGTGTTCTCGATTACTGGTCGTGGTACGGTCGCTACCGGGCGTGTCGAAAGGGGTACGGTTCGAGTTGGAGAGACGGTGGATATTGTGGGATTGAAGGAAACTAGGAACACAACCGTCACAGGGGTGGAGATGTTTCAGAAAATTCTTGATGAGGCTTTGGCTGGAGATAATGTTGGATTGTTGCTTAGAGGTGTTCAAAAGACTGATATTCAAAGAGGGATGGTTTTGTCCAAGCCTGGCAGCATTACCCCACACACCAAGTTTTCTGCTGTTGTGTATGTGTTGAAGAAGGAAGAGGGTGGTAGGCATTCACCCTTTTTTTCCGGTTACAGACCGCAATTTTATATGAGGACTACCGATGTCACTGGTACGGTGACTTCGATCATGAATGACAAGGATGAAGAGTCGAAAATGGTTATGCCGGGTGACCGTGTGAAAATGGTTGTGCAACTGATTATGCCAGTGGCTTGTGAACAAGGAATGAGGTTTGCCATCAGAGAAGGTGGGAAGACTGTTGGAGCTGGTGTGATTCAGGCTATTATCGAGTGA

Protein sequence

MAAISLASTSSKLNFPHPSSSSFAKPSSVTNLSSPFLNPSSIRPLTFSSSNSATVTRPRSFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDEIDAAPEERARGITINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDNELLELVELEMRELLSSYEFPGDDVPITAGSALLALEALMANPNIGRGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVEDVFSITGRGTVATGRVERGTVRVGETVDIVGLKETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQKTDIQRGMVLSKPGSITPHTKFSAVVYVLKKEEGGRHSPFFSGYRPQFYMRTTDVTGTVTSIMNDKDEESKMVMPGDRVKMVVQLIMPVACEQGMRFAIREGGKTVGAGVIQAIIE

Homology

[Close]

BLAST of Sed0028001 vs. NCBI nr
Match: XP_022933691.1 (elongation factor Tu, chloroplastic-like [Cucurbita moschata] >KAG7021422.1 Elongation factor Tu, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 852.8 bits (2202), Expect = 1.4e-243
Identity = 443/474 (93.46%), Postives = 456/474 (96.20%), Query Frame = 0


Query: 1   MAAISLA----STSSKLNFPHPSSSSF-AKPSSVTNLSSPFLNPSSIRPLTFSSSNSATV 60
           MAAISLA    STSSKL FPHPS S F +KPSS+TNLSS FLNPSS+RPLTF+SS+SATV
Sbjct: 1   MAAISLASASTSTSSKLAFPHPSPSPFSSKPSSITNLSSSFLNPSSLRPLTFTSSSSATV 60

Query: 61  TRPRSFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDEIDAAPE 120
            R  SFT+RAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDEIDAAPE
Sbjct: 61  KRSPSFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDEIDAAPE 120

Query: 121 ERARGITINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQ 180
           ERARGITINTATVEYETE+RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQ
Sbjct: 121 ERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQ 180

Query: 181 TKEHILLAKQVGVPNMVVFLNKKDQVDDNELLELVELEMRELLSSYEFPGDDVPITAGSA 240
           TKEHILLAKQVGVPNMVVFLNKKDQVDD ELLELVELEMRELLSSYEFPGDDVPI AGSA
Sbjct: 181 TKEHILLAKQVGVPNMVVFLNKKDQVDDEELLELVELEMRELLSSYEFPGDDVPIVAGSA 240

Query: 241 LLALEALMANPNIGRGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVEDVFSITGRG 300
           LLALEALMANPNI RGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVEDVFSITGRG
Sbjct: 241 LLALEALMANPNIVRGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVEDVFSITGRG 300

Query: 301 TVATGRVERGTVRVGETVDIVGLKETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQKT 360
           TVATGRVERGTVRVGETVDIVGL+ETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQK 
Sbjct: 301 TVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQKA 360

Query: 361 DIQRGMVLSKPGSITPHTKFSAVVYVLKKEEGGRHSPFFSGYRPQFYMRTTDVTGTVTSI 420
           DIQRGMVL+KPG+ITPHTKF AVVYVLKKEEGGRHSPFF+GYRPQFYMRTTDVTG VTSI
Sbjct: 361 DIQRGMVLAKPGTITPHTKFVAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTSI 420

Query: 421 MNDKDEESKMVMPGDRVKMVVQLIMPVACEQGMRFAIREGGKTVGAGVIQAIIE 470
           MNDKDEESKMVMPGDRVKMVV+LIMPVACEQGMRFAIREGGKTVGAGVIQ+IIE
Sbjct: 421 MNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 474

[Close]

BLAST of Sed0028001 vs. NCBI nr
Match: KAG6587440.1 (Elongation factor Tu, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 852.4 bits (2201), Expect = 1.8e-243
Identity = 443/474 (93.46%), Postives = 456/474 (96.20%), Query Frame = 0


Query: 1   MAAISLA----STSSKLNFPHPSSSSF-AKPSSVTNLSSPFLNPSSIRPLTFSSSNSATV 60
           MAAISLA    STSSKL FPHPS S F +KPSS+TNLSS FLNPSS+RPLTF+SS+SATV
Sbjct: 1   MAAISLASASTSTSSKLVFPHPSPSPFSSKPSSITNLSSSFLNPSSLRPLTFTSSSSATV 60

Query: 61  TRPRSFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDEIDAAPE 120
            R  SFT+RAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDEIDAAPE
Sbjct: 61  KRSPSFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDEIDAAPE 120

Query: 121 ERARGITINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQ 180
           ERARGITINTATVEYETE+RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQ
Sbjct: 121 ERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQ 180

Query: 181 TKEHILLAKQVGVPNMVVFLNKKDQVDDNELLELVELEMRELLSSYEFPGDDVPITAGSA 240
           TKEHILLAKQVGVPNMVVFLNKKDQVDD ELLELVELEMRELLSSYEFPGDDVPI AGSA
Sbjct: 181 TKEHILLAKQVGVPNMVVFLNKKDQVDDEELLELVELEMRELLSSYEFPGDDVPIVAGSA 240

Query: 241 LLALEALMANPNIGRGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVEDVFSITGRG 300
           LLALEALMANPNI RGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVEDVFSITGRG
Sbjct: 241 LLALEALMANPNIVRGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVEDVFSITGRG 300

Query: 301 TVATGRVERGTVRVGETVDIVGLKETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQKT 360
           TVATGRVERGTVRVGETVDIVGL+ETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQK 
Sbjct: 301 TVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQKA 360

Query: 361 DIQRGMVLSKPGSITPHTKFSAVVYVLKKEEGGRHSPFFSGYRPQFYMRTTDVTGTVTSI 420
           DIQRGMVL+KPG+ITPHTKF AVVYVLKKEEGGRHSPFF+GYRPQFYMRTTDVTG VTSI
Sbjct: 361 DIQRGMVLAKPGTITPHTKFVAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTSI 420

Query: 421 MNDKDEESKMVMPGDRVKMVVQLIMPVACEQGMRFAIREGGKTVGAGVIQAIIE 470
           MNDKDEESKMVMPGDRVKMVV+LIMPVACEQGMRFAIREGGKTVGAGVIQ+IIE
Sbjct: 421 MNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 474

[Close]

BLAST of Sed0028001 vs. NCBI nr
Match: XP_023530750.1 (elongation factor Tu, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 849.0 bits (2192), Expect = 2.0e-242
Identity = 441/474 (93.04%), Postives = 455/474 (95.99%), Query Frame = 0


Query: 1   MAAISLA----STSSKLNFPHPSSSSF-AKPSSVTNLSSPFLNPSSIRPLTFSSSNSATV 60
           MAAISLA    STSSKL FPHPS S F +KPSS+T LSS FLNPSS+RPLTF+SS+SATV
Sbjct: 1   MAAISLASAPTSTSSKLAFPHPSPSPFSSKPSSITKLSSSFLNPSSLRPLTFTSSSSATV 60

Query: 61  TRPRSFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDEIDAAPE 120
            R  SFT+RAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDEIDAAPE
Sbjct: 61  KRSPSFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDEIDAAPE 120

Query: 121 ERARGITINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQ 180
           ERARGITINTATVEYETE+RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQ
Sbjct: 121 ERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQ 180

Query: 181 TKEHILLAKQVGVPNMVVFLNKKDQVDDNELLELVELEMRELLSSYEFPGDDVPITAGSA 240
           TKEHILLAKQVGVPNMVVFLNKKDQVDD ELLELVELEMRELLSSYEFPGDDVPI AGSA
Sbjct: 181 TKEHILLAKQVGVPNMVVFLNKKDQVDDEELLELVELEMRELLSSYEFPGDDVPIIAGSA 240

Query: 241 LLALEALMANPNIGRGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVEDVFSITGRG 300
           LLALEALMANPNI RGENEWVDKIFELMD+VDSYIPIPERQTDLPFLLAVEDVFSITGRG
Sbjct: 241 LLALEALMANPNIVRGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDVFSITGRG 300

Query: 301 TVATGRVERGTVRVGETVDIVGLKETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQKT 360
           TVATGRVERGTVRVGETVDIVGL+ETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQK 
Sbjct: 301 TVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQKA 360

Query: 361 DIQRGMVLSKPGSITPHTKFSAVVYVLKKEEGGRHSPFFSGYRPQFYMRTTDVTGTVTSI 420
           DIQRGMVL+KPG+ITPHTKF AVVYVLKKEEGGRHSPFF+GYRPQFYMRTTDVTG VTSI
Sbjct: 361 DIQRGMVLAKPGTITPHTKFVAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTSI 420

Query: 421 MNDKDEESKMVMPGDRVKMVVQLIMPVACEQGMRFAIREGGKTVGAGVIQAIIE 470
           MNDKDEESKMVMPGDRVKMVV+LIMPVACEQGMRFAIREGGKTVGAGVIQ+IIE
Sbjct: 421 MNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 474

[Close]

BLAST of Sed0028001 vs. NCBI nr
Match: XP_023004504.1 (elongation factor Tu, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 849.0 bits (2192), Expect = 2.0e-242
Identity = 440/474 (92.83%), Postives = 455/474 (95.99%), Query Frame = 0


Query: 1   MAAISLA----STSSKLNFPHPSSSSF-AKPSSVTNLSSPFLNPSSIRPLTFSSSNSATV 60
           MAAISLA    STSSKL FPHPS S F +KPSS+T LSS FLNPSS+RPLTF+SS+S+TV
Sbjct: 1   MAAISLASASTSTSSKLAFPHPSPSPFSSKPSSITKLSSSFLNPSSLRPLTFTSSSSSTV 60

Query: 61  TRPRSFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDEIDAAPE 120
            R  SFT+RAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDEIDAAPE
Sbjct: 61  KRSPSFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDEIDAAPE 120

Query: 121 ERARGITINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQ 180
           ERARGITINTATVEYETE+RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQ
Sbjct: 121 ERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQ 180

Query: 181 TKEHILLAKQVGVPNMVVFLNKKDQVDDNELLELVELEMRELLSSYEFPGDDVPITAGSA 240
           TKEHILLAKQVGVPNMVVFLNKKDQVDD ELLELVELEMRELLSSYEFPGDDVPI AGSA
Sbjct: 181 TKEHILLAKQVGVPNMVVFLNKKDQVDDEELLELVELEMRELLSSYEFPGDDVPIVAGSA 240

Query: 241 LLALEALMANPNIGRGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVEDVFSITGRG 300
           LLALEALMANPNI RGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVEDVFSITGRG
Sbjct: 241 LLALEALMANPNIVRGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVEDVFSITGRG 300

Query: 301 TVATGRVERGTVRVGETVDIVGLKETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQKT 360
           TVATGRVERGTVRVGETVDIVGL+ETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQK 
Sbjct: 301 TVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQKA 360

Query: 361 DIQRGMVLSKPGSITPHTKFSAVVYVLKKEEGGRHSPFFSGYRPQFYMRTTDVTGTVTSI 420
           DIQRGMVL+KPG+ITPHTKF AVVYVLKKEEGGRHSPFF+GYRPQFYMRTTDVTG VTSI
Sbjct: 361 DIQRGMVLAKPGTITPHTKFLAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTSI 420

Query: 421 MNDKDEESKMVMPGDRVKMVVQLIMPVACEQGMRFAIREGGKTVGAGVIQAIIE 470
           MNDKDEESKMVMPGDRVKM+V+LIMPVACEQGMRFAIREGGKTVGAGVIQ+IIE
Sbjct: 421 MNDKDEESKMVMPGDRVKMIVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 474

[Close]

BLAST of Sed0028001 vs. NCBI nr
Match: XP_022135255.1 (elongation factor Tu, chloroplastic [Momordica charantia])

HSP 1 Score: 844.3 bits (2180), Expect = 4.9e-241
Identity = 438/478 (91.63%), Postives = 454/478 (94.98%), Query Frame = 0


Query: 1   MAAISL--ASTSSKLNFPH-------PSSSSFAKPSSVTNLSSPFLNPSSIRPLTFSSSN 60
           MAAISL  ASTS+KL FPH       P +S FAKPSS+  LSS FLNPSSIRPLTFSS +
Sbjct: 1   MAAISLASASTSTKLVFPHASPSPSSPPASLFAKPSSIPKLSSSFLNPSSIRPLTFSSGS 60

Query: 61  SATVTRPRSFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDEID 120
           SATV RPRSFT+RAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDEID
Sbjct: 61  SATVARPRSFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDEID 120

Query: 121 AAPEERARGITINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADG 180
           AAPEERARGITINTATVEYETE+RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADG
Sbjct: 121 AAPEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADG 180

Query: 181 PMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDNELLELVELEMRELLSSYEFPGDDVPIT 240
           PMPQTKEHILLAKQVGVPNMVVFLNKKDQVDD ELL+LVELEMRELLSSYEFPGDDVPI 
Sbjct: 181 PMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLQLVELEMRELLSSYEFPGDDVPII 240

Query: 241 AGSALLALEALMANPNIGRGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVEDVFSI 300
           AGSALLALEALMAN +I RGENEWVDKIFELMD+VDSYIPIPERQTDLPFLLAVEDVFSI
Sbjct: 241 AGSALLALEALMANQSIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDVFSI 300

Query: 301 TGRGTVATGRVERGTVRVGETVDIVGLKETRNTTVTGVEMFQKILDEALAGDNVGLLLRG 360
           TGRGTVATGRVERGT+RVG+TVDIVGL+ETRNTTVTGVEMFQKILDEALAGDNVGLLLRG
Sbjct: 301 TGRGTVATGRVERGTIRVGDTVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRG 360

Query: 361 VQKTDIQRGMVLSKPGSITPHTKFSAVVYVLKKEEGGRHSPFFSGYRPQFYMRTTDVTGT 420
           VQK DIQRGMVLSKPG+ITPHTKF AVVYVLKKEEGGRHSPFF+GYRPQFYMRTTDVTG 
Sbjct: 361 VQKADIQRGMVLSKPGTITPHTKFLAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGK 420

Query: 421 VTSIMNDKDEESKMVMPGDRVKMVVQLIMPVACEQGMRFAIREGGKTVGAGVIQAIIE 470
           VTSIMNDKDEESKMVMPGDRVKMVV+LIMPVACEQGMRFAIREGGKTVGAGVIQ+IIE
Sbjct: 421 VTSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 478

[Close]

BLAST of Sed0028001 vs. ExPASy Swiss-Prot
Match: Q43467 (Elongation factor Tu, chloroplastic OS=Glycine max OX=3847 GN=TUFA PE=3 SV=1)

HSP 1 Score: 768.5 bits (1983), Expect = 4.5e-221
Identity = 404/482 (83.82%), Postives = 435/482 (90.25%), Query Frame = 0


Query: 3   AISLASTSSKL-NFPHPSSSSFAKP----SSVTN------LSSPFLNPSSIRPLTFSSSN 62
           A+S A+ SSKL   PH SSSS        SS TN      LSS FL+P+++   T SS  
Sbjct: 2   AVSSATASSKLILLPHASSSSSLNSTPFRSSTTNTHKLTPLSSSFLHPTTVLRRTPSS-- 61

Query: 63  SATVTRPRSFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMAL----SKAPKKY 122
             T T  R+FTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMAL    + APKKY
Sbjct: 62  --TTTPRRTFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALAALGNSAPKKY 121

Query: 123 DEIDAAPEERARGITINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVS 182
           DEIDAAPEERARGITINTATVEYETE RHYAHVDCPGHADYVKNMITGAAQMDGAILVVS
Sbjct: 122 DEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVS 181

Query: 183 GADGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDNELLELVELEMRELLSSYEFPGDD 242
           GADGPMPQTKEHI+LAKQVGVPNMVVFLNK+DQVDD ELL+LVE+E+R+LLSSYEFPGDD
Sbjct: 182 GADGPMPQTKEHIILAKQVGVPNMVVFLNKQDQVDDEELLQLVEIEVRDLLSSYEFPGDD 241

Query: 243 VPITAGSALLALEALMANPNIGRGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVED 302
            PI +GSALLALEALMANP I RG+NEWVDKIF+LMD VD+YIPIP+RQTDLPFLLAVED
Sbjct: 242 TPIVSGSALLALEALMANPAIKRGDNEWVDKIFQLMDEVDNYIPIPQRQTDLPFLLAVED 301

Query: 303 VFSITGRGTVATGRVERGTVRVGETVDIVGLKETRNTTVTGVEMFQKILDEALAGDNVGL 362
           VFSITGRGTVATGRVERGT++VGETVD+VGL+ETRNTTVTGVEMFQKILDEALAGDNVGL
Sbjct: 302 VFSITGRGTVATGRVERGTIKVGETVDLVGLRETRNTTVTGVEMFQKILDEALAGDNVGL 361

Query: 363 LLRGVQKTDIQRGMVLSKPGSITPHTKFSAVVYVLKKEEGGRHSPFFSGYRPQFYMRTTD 422
           LLRGVQKTDIQRGMVL+KPG+ITPHTKFSA+VYVLKKEEGGRHSPFF+GYRPQFYMRTTD
Sbjct: 362 LLRGVQKTDIQRGMVLAKPGTITPHTKFSAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTD 421

Query: 423 VTGTVTSIMNDKDEESKMVMPGDRVKMVVQLIMPVACEQGMRFAIREGGKTVGAGVIQAI 470
           VTG VTSIMNDKDEES MV+PGDRVKMVV+LI+PVACEQGMRFAIREGGKTVGAGVIQ+I
Sbjct: 422 VTGKVTSIMNDKDEESTMVLPGDRVKMVVELIVPVACEQGMRFAIREGGKTVGAGVIQSI 479

[Close]

BLAST of Sed0028001 vs. ExPASy Swiss-Prot
Match: P46280 (Elongation factor Tu, chloroplastic OS=Glycine max OX=3847 GN=TUFB1 PE=3 SV=1)

HSP 1 Score: 767.7 bits (1981), Expect = 7.6e-221
Identity = 402/483 (83.23%), Postives = 440/483 (91.10%), Query Frame = 0


Query: 1   MAAISLASTSSKLNFP-----HPSSSS---FAK--PSSVTNLSSPFLNPSSIRPLTFSSS 60
           MA    A+T+SKL +P      PS SS   F K    S T+LSS F++P++I  L  +++
Sbjct: 1   MAISWAAATTSKLAYPPHVHFSPSPSSNYLFLKTHKPSATHLSSSFIHPTTI--LHLAAA 60

Query: 61  NSATVTRPRSFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMAL----SKAPKK 120
           N  T TR RSFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMAL    + APKK
Sbjct: 61  N--TTTRRRSFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASLGNSAPKK 120

Query: 121 YDEIDAAPEERARGITINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVV 180
           YDEIDAAPEERARGITINTATVEYETE RHYAHVDCPGHADYVKNMITGAAQMDGAILVV
Sbjct: 121 YDEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVV 180

Query: 181 SGADGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDNELLELVELEMRELLSSYEFPGD 240
           SGADGPMPQTKEHILLAKQVGVPN+VVFLNK+DQVDD ELL+LVELE+RELLS YEFPGD
Sbjct: 181 SGADGPMPQTKEHILLAKQVGVPNIVVFLNKQDQVDDEELLQLVELEVRELLSKYEFPGD 240

Query: 241 DVPITAGSALLALEALMANPNIGRGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVE 300
           DVPI +GSALL+LEALMANP+I RGEN+WVDKI+ELM++VD YIPIP+RQT+LPFLLA+E
Sbjct: 241 DVPIISGSALLSLEALMANPSIKRGENQWVDKIYELMEAVDDYIPIPQRQTELPFLLAIE 300

Query: 301 DVFSITGRGTVATGRVERGTVRVGETVDIVGLKETRNTTVTGVEMFQKILDEALAGDNVG 360
           DVF+ITGRGTVATGRVERGT+RVGETVDIVG+K+TRNTTVTGVEMFQKILDEALAGDNVG
Sbjct: 301 DVFTITGRGTVATGRVERGTIRVGETVDIVGVKDTRNTTVTGVEMFQKILDEALAGDNVG 360

Query: 361 LLLRGVQKTDIQRGMVLSKPGSITPHTKFSAVVYVLKKEEGGRHSPFFSGYRPQFYMRTT 420
           LLLRG+QKTDIQRGMVL+KPG+ITPHTKFSA+VYVLKKEEGGRHSPFFSGYRPQFYMRTT
Sbjct: 361 LLLRGIQKTDIQRGMVLAKPGTITPHTKFSAIVYVLKKEEGGRHSPFFSGYRPQFYMRTT 420

Query: 421 DVTGTVTSIMNDKDEESKMVMPGDRVKMVVQLIMPVACEQGMRFAIREGGKTVGAGVIQA 470
           DVTG VT IMNDKDEESKMVMPGDRVK+VV+LI+PVACEQGMRFAIREGGKTVGAGVIQ+
Sbjct: 421 DVTGKVTEIMNDKDEESKMVMPGDRVKLVVELIVPVACEQGMRFAIREGGKTVGAGVIQS 479

[Close]

BLAST of Sed0028001 vs. ExPASy Swiss-Prot
Match: Q43364 (Elongation factor TuB, chloroplastic OS=Nicotiana sylvestris OX=4096 GN=TUFB PE=2 SV=1)

HSP 1 Score: 753.4 bits (1944), Expect = 1.5e-216
Identity = 393/481 (81.70%), Postives = 428/481 (88.98%), Query Frame = 0


Query: 2   AAISLASTSSKLNFPH-PSSSS--------FAKPSSVTNLSSPFLNPSSIRPLTFSSSNS 61
           AA + A+ S+KL +P+ PSSSS        F   SS   LSS F  P+       S + +
Sbjct: 6   AASATATASTKLAYPYSPSSSSSSSNTAAVFPSNSSKLILSSSF-TPTPSTLFLHSPTTT 65

Query: 62  ATVTRPRSFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMAL----SKAPKKYD 121
            + T PR FTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMAL    + APKKYD
Sbjct: 66  PSTTHPRRFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASMGNSAPKKYD 125

Query: 122 EIDAAPEERARGITINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSG 181
           EIDAAPEERARGITINTATVEYETE RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSG
Sbjct: 126 EIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSG 185

Query: 182 ADGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDNELLELVELEMRELLSSYEFPGDDV 241
           ADGPMPQTKEHILLAKQVGVPNMVVFLNK+DQVDD ELLELVELE+RELLSSYEFPGD++
Sbjct: 186 ADGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLELVELEVRELLSSYEFPGDEI 245

Query: 242 PITAGSALLALEALMANPNIGRGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVEDV 301
           PI +GSALLALEALMANP+I RGEN+WVDKI++LMD+VD YIPIP+RQT+LPFL+A+EDV
Sbjct: 246 PIISGSALLALEALMANPSIKRGENQWVDKIYQLMDNVDEYIPIPQRQTELPFLMAIEDV 305

Query: 302 FSITGRGTVATGRVERGTVRVGETVDIVGLKETRNTTVTGVEMFQKILDEALAGDNVGLL 361
           FSITGRGTVATGRVERGTV+VGE VDIVGLK+TRNTTVTGVEMFQKILDEA+AGDNVGLL
Sbjct: 306 FSITGRGTVATGRVERGTVKVGEIVDIVGLKDTRNTTVTGVEMFQKILDEAMAGDNVGLL 365

Query: 362 LRGVQKTDIQRGMVLSKPGSITPHTKFSAVVYVLKKEEGGRHSPFFSGYRPQFYMRTTDV 421
           LRG+QK DIQRGMVL+KPG+ITPHTKF A+VYVLKKEEGGRHSPFF+GYRPQFYMRTTDV
Sbjct: 366 LRGIQKIDIQRGMVLAKPGTITPHTKFEALVYVLKKEEGGRHSPFFAGYRPQFYMRTTDV 425

Query: 422 TGTVTSIMNDKDEESKMVMPGDRVKMVVQLIMPVACEQGMRFAIREGGKTVGAGVIQAII 470
           TG VT IM+DK EESKMVMPGDRV MVV+LIMPVACEQGMRFAIREGGKTVGAGVIQ I+
Sbjct: 426 TGKVTVIMSDKGEESKMVMPGDRVNMVVELIMPVACEQGMRFAIREGGKTVGAGVIQKIL 485

[Close]

BLAST of Sed0028001 vs. ExPASy Swiss-Prot
Match: O24310 (Elongation factor Tu, chloroplastic OS=Pisum sativum OX=3888 GN=tufA PE=2 SV=1)

HSP 1 Score: 748.0 bits (1930), Expect = 6.3e-215
Identity = 387/483 (80.12%), Postives = 427/483 (88.41%), Query Frame = 0


Query: 7   ASTSSKLNFPHP----------------SSSSFAKPSSVTNLSSPFLNPSSIRPLTFSSS 66
           A+TSSKL   +P                +S+SF    ++T LSS FLNPS+I  LT S  
Sbjct: 8   ATTSSKLKLSNPPSLSHTFTASASASVSNSTSFRPKLTLTRLSSSFLNPSTILHLTPSQR 67

Query: 67  NSATVTRPRSFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMAL----SKAPKK 126
            +   + P  FTVRAARGKFERKKPH+NIGTIGHVDHGKTTLTAALTMAL    + APKK
Sbjct: 68  TNRPSSSP--FTVRAARGKFERKKPHLNIGTIGHVDHGKTTLTAALTMALACLGNSAPKK 127

Query: 127 YDEIDAAPEERARGITINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVV 186
           YDEIDAAPEERARGITINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVV
Sbjct: 128 YDEIDAAPEERARGITINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVV 187

Query: 187 SGADGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDNELLELVELEMRELLSSYEFPGD 246
           SGADGPMPQTKEHILLAKQVGVP++VVFLNK+DQVDD ELLELVELE+RELLSSYEFPGD
Sbjct: 188 SGADGPMPQTKEHILLAKQVGVPSVVVFLNKQDQVDDEELLELVELEVRELLSSYEFPGD 247

Query: 247 DVPITAGSALLALEALMANPNIGRGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVE 306
           D+PI +GSALLALEALMANP + RG N+WVDKI++LMD VD YIPIP+RQT+LPFLLA+E
Sbjct: 248 DIPIVSGSALLALEALMANPTLKRGNNQWVDKIYQLMDEVDKYIPIPQRQTELPFLLAIE 307

Query: 307 DVFSITGRGTVATGRVERGTVRVGETVDIVGLKETRNTTVTGVEMFQKILDEALAGDNVG 366
           DVFSIT RGTVATGR+ERG V+VG+ VD+VGL+ETRNTTVTGVEMFQKILD+A+AGDNVG
Sbjct: 308 DVFSITXRGTVATGRIERGLVKVGDVVDLVGLRETRNTTVTGVEMFQKILDDAMAGDNVG 367

Query: 367 LLLRGVQKTDIQRGMVLSKPGSITPHTKFSAVVYVLKKEEGGRHSPFFSGYRPQFYMRTT 426
           LLLRG+QK DIQRGMVL+KPG+ITPH+KFSA+VYVLKKEEGGRHSPFF+GYRPQFYMRTT
Sbjct: 368 LLLRGIQKIDIQRGMVLAKPGTITPHSKFSAIVYVLKKEEGGRHSPFFAGYRPQFYMRTT 427

Query: 427 DVTGTVTSIMNDKDEESKMVMPGDRVKMVVQLIMPVACEQGMRFAIREGGKTVGAGVIQA 470
           DVTG VTSIMNDKDEESKMVMPGDRVK+VV+LI+PVA EQGMRFAIREGGKTVGAGVI A
Sbjct: 428 DVTGKVTSIMNDKDEESKMVMPGDRVKIVVELIVPVAIEQGMRFAIREGGKTVGAGVIGA 487

[Close]

BLAST of Sed0028001 vs. ExPASy Swiss-Prot
Match: Q40450 (Elongation factor TuA, chloroplastic OS=Nicotiana sylvestris OX=4096 GN=TUFA PE=2 SV=2)

HSP 1 Score: 747.7 bits (1929), Expect = 8.2e-215
Identity = 395/479 (82.46%), Postives = 428/479 (89.35%), Query Frame = 0


Query: 1   MAAIS--LASTSSKL---NFPHPSSSSFAKPSSVTNLSSPFLNPSSIRPLTFSSSNSATV 60
           MA+IS   A++S+KL   N  +P   S  KPS +  LSS F    S   L   ++ S+T 
Sbjct: 1   MASISAATATSSTKLVSSNSTNPLLPSSTKPSKLI-LSSSFTPNCSTLFLHSPATPSSTA 60

Query: 61  T-RPRSFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMAL----SKAPKKYDEI 120
           T R R FTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMAL    + APKKYDEI
Sbjct: 61  THRHRRFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASMGNSAPKKYDEI 120

Query: 121 DAAPEERARGITINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGAD 180
           DAAPEERARGITINTATVEYETE RHYAHVDCPGHADYVKNMITGAAQMDGAILV SGAD
Sbjct: 121 DAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSGAD 180

Query: 181 GPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDNELLELVELEMRELLSSYEFPGDDVPI 240
           GPMPQTKEHILLAKQVGVPNMVVFLNK+DQVDD ELL+LVELE+RELLSSYEFPGDD+PI
Sbjct: 181 GPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVELEVRELLSSYEFPGDDIPI 240

Query: 241 TAGSALLALEALMANPNIGRGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVEDVFS 300
            +GSALLALEALMANP+I RGEN+WVDKI+ELMD+VDSYIPIP RQT+LPFL+A+EDVFS
Sbjct: 241 ISGSALLALEALMANPSIKRGENQWVDKIYELMDAVDSYIPIPVRQTELPFLMAIEDVFS 300

Query: 301 ITGRGTVATGRVERGTVRVGETVDIVGLKETRNTTVTGVEMFQKILDEALAGDNVGLLLR 360
           ITGRGTVATGRVERGTVR+G+TVDIVGLK+TR+TTVTGVEMFQKILDEA+AGDNVGLLLR
Sbjct: 301 ITGRGTVATGRVERGTVRIGDTVDIVGLKDTRSTTVTGVEMFQKILDEAMAGDNVGLLLR 360

Query: 361 GVQKTDIQRGMVLSKPGSITPHTKFSAVVYVLKKEEGGRHSPFFSGYRPQFYMRTTDVTG 420
           G+QK DIQRGMVL+KPG+ITPHTKF A+VYVLKKEEGGRHSPFFSGYRPQFYMRTTDVTG
Sbjct: 361 GIQKIDIQRGMVLAKPGTITPHTKFEAIVYVLKKEEGGRHSPFFSGYRPQFYMRTTDVTG 420

Query: 421 TVTSIMNDKDEESKMVMPGDRVKMVVQLIMPVACEQGMRFAIREGGKTVGAGVIQAIIE 470
            VTSI  DK EESKMVMPGDRV +VV+LIMPVACEQGMRFAIREGGKTVGAGVIQ IIE
Sbjct: 421 KVTSITTDKGEESKMVMPGDRVNLVVELIMPVACEQGMRFAIREGGKTVGAGVIQKIIE 478

[Close]

BLAST of Sed0028001 vs. ExPASy TrEMBL
Match: A0A6J1EZS3 (Elongation factor Tu OS=Cucurbita moschata OX=3662 GN=LOC111441027 PE=3 SV=1)

HSP 1 Score: 852.8 bits (2202), Expect = 6.7e-244
Identity = 443/474 (93.46%), Postives = 456/474 (96.20%), Query Frame = 0


Query: 1   MAAISLA----STSSKLNFPHPSSSSF-AKPSSVTNLSSPFLNPSSIRPLTFSSSNSATV 60
           MAAISLA    STSSKL FPHPS S F +KPSS+TNLSS FLNPSS+RPLTF+SS+SATV
Sbjct: 1   MAAISLASASTSTSSKLAFPHPSPSPFSSKPSSITNLSSSFLNPSSLRPLTFTSSSSATV 60

Query: 61  TRPRSFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDEIDAAPE 120
            R  SFT+RAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDEIDAAPE
Sbjct: 61  KRSPSFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDEIDAAPE 120

Query: 121 ERARGITINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQ 180
           ERARGITINTATVEYETE+RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQ
Sbjct: 121 ERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQ 180

Query: 181 TKEHILLAKQVGVPNMVVFLNKKDQVDDNELLELVELEMRELLSSYEFPGDDVPITAGSA 240
           TKEHILLAKQVGVPNMVVFLNKKDQVDD ELLELVELEMRELLSSYEFPGDDVPI AGSA
Sbjct: 181 TKEHILLAKQVGVPNMVVFLNKKDQVDDEELLELVELEMRELLSSYEFPGDDVPIVAGSA 240

Query: 241 LLALEALMANPNIGRGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVEDVFSITGRG 300
           LLALEALMANPNI RGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVEDVFSITGRG
Sbjct: 241 LLALEALMANPNIVRGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVEDVFSITGRG 300

Query: 301 TVATGRVERGTVRVGETVDIVGLKETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQKT 360
           TVATGRVERGTVRVGETVDIVGL+ETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQK 
Sbjct: 301 TVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQKA 360

Query: 361 DIQRGMVLSKPGSITPHTKFSAVVYVLKKEEGGRHSPFFSGYRPQFYMRTTDVTGTVTSI 420
           DIQRGMVL+KPG+ITPHTKF AVVYVLKKEEGGRHSPFF+GYRPQFYMRTTDVTG VTSI
Sbjct: 361 DIQRGMVLAKPGTITPHTKFVAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTSI 420

Query: 421 MNDKDEESKMVMPGDRVKMVVQLIMPVACEQGMRFAIREGGKTVGAGVIQAIIE 470
           MNDKDEESKMVMPGDRVKMVV+LIMPVACEQGMRFAIREGGKTVGAGVIQ+IIE
Sbjct: 421 MNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 474

[Close]

BLAST of Sed0028001 vs. ExPASy TrEMBL
Match: A0A6J1KWG0 (Elongation factor Tu OS=Cucurbita maxima OX=3661 GN=LOC111497788 PE=3 SV=1)

HSP 1 Score: 849.0 bits (2192), Expect = 9.6e-243
Identity = 440/474 (92.83%), Postives = 455/474 (95.99%), Query Frame = 0


Query: 1   MAAISLA----STSSKLNFPHPSSSSF-AKPSSVTNLSSPFLNPSSIRPLTFSSSNSATV 60
           MAAISLA    STSSKL FPHPS S F +KPSS+T LSS FLNPSS+RPLTF+SS+S+TV
Sbjct: 1   MAAISLASASTSTSSKLAFPHPSPSPFSSKPSSITKLSSSFLNPSSLRPLTFTSSSSSTV 60

Query: 61  TRPRSFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDEIDAAPE 120
            R  SFT+RAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDEIDAAPE
Sbjct: 61  KRSPSFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDEIDAAPE 120

Query: 121 ERARGITINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQ 180
           ERARGITINTATVEYETE+RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQ
Sbjct: 121 ERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQ 180

Query: 181 TKEHILLAKQVGVPNMVVFLNKKDQVDDNELLELVELEMRELLSSYEFPGDDVPITAGSA 240
           TKEHILLAKQVGVPNMVVFLNKKDQVDD ELLELVELEMRELLSSYEFPGDDVPI AGSA
Sbjct: 181 TKEHILLAKQVGVPNMVVFLNKKDQVDDEELLELVELEMRELLSSYEFPGDDVPIVAGSA 240

Query: 241 LLALEALMANPNIGRGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVEDVFSITGRG 300
           LLALEALMANPNI RGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVEDVFSITGRG
Sbjct: 241 LLALEALMANPNIVRGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVEDVFSITGRG 300

Query: 301 TVATGRVERGTVRVGETVDIVGLKETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQKT 360
           TVATGRVERGTVRVGETVDIVGL+ETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQK 
Sbjct: 301 TVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQKA 360

Query: 361 DIQRGMVLSKPGSITPHTKFSAVVYVLKKEEGGRHSPFFSGYRPQFYMRTTDVTGTVTSI 420
           DIQRGMVL+KPG+ITPHTKF AVVYVLKKEEGGRHSPFF+GYRPQFYMRTTDVTG VTSI
Sbjct: 361 DIQRGMVLAKPGTITPHTKFLAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTSI 420

Query: 421 MNDKDEESKMVMPGDRVKMVVQLIMPVACEQGMRFAIREGGKTVGAGVIQAIIE 470
           MNDKDEESKMVMPGDRVKM+V+LIMPVACEQGMRFAIREGGKTVGAGVIQ+IIE
Sbjct: 421 MNDKDEESKMVMPGDRVKMIVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 474

[Close]

BLAST of Sed0028001 vs. ExPASy TrEMBL
Match: A0A6J1C0N2 (Elongation factor Tu OS=Momordica charantia OX=3673 GN=LOC111007263 PE=3 SV=1)

HSP 1 Score: 844.3 bits (2180), Expect = 2.4e-241
Identity = 438/478 (91.63%), Postives = 454/478 (94.98%), Query Frame = 0


Query: 1   MAAISL--ASTSSKLNFPH-------PSSSSFAKPSSVTNLSSPFLNPSSIRPLTFSSSN 60
           MAAISL  ASTS+KL FPH       P +S FAKPSS+  LSS FLNPSSIRPLTFSS +
Sbjct: 1   MAAISLASASTSTKLVFPHASPSPSSPPASLFAKPSSIPKLSSSFLNPSSIRPLTFSSGS 60

Query: 61  SATVTRPRSFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDEID 120
           SATV RPRSFT+RAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDEID
Sbjct: 61  SATVARPRSFTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDEID 120

Query: 121 AAPEERARGITINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADG 180
           AAPEERARGITINTATVEYETE+RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADG
Sbjct: 121 AAPEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADG 180

Query: 181 PMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDNELLELVELEMRELLSSYEFPGDDVPIT 240
           PMPQTKEHILLAKQVGVPNMVVFLNKKDQVDD ELL+LVELEMRELLSSYEFPGDDVPI 
Sbjct: 181 PMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLQLVELEMRELLSSYEFPGDDVPII 240

Query: 241 AGSALLALEALMANPNIGRGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVEDVFSI 300
           AGSALLALEALMAN +I RGENEWVDKIFELMD+VDSYIPIPERQTDLPFLLAVEDVFSI
Sbjct: 241 AGSALLALEALMANQSIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDVFSI 300

Query: 301 TGRGTVATGRVERGTVRVGETVDIVGLKETRNTTVTGVEMFQKILDEALAGDNVGLLLRG 360
           TGRGTVATGRVERGT+RVG+TVDIVGL+ETRNTTVTGVEMFQKILDEALAGDNVGLLLRG
Sbjct: 301 TGRGTVATGRVERGTIRVGDTVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRG 360

Query: 361 VQKTDIQRGMVLSKPGSITPHTKFSAVVYVLKKEEGGRHSPFFSGYRPQFYMRTTDVTGT 420
           VQK DIQRGMVLSKPG+ITPHTKF AVVYVLKKEEGGRHSPFF+GYRPQFYMRTTDVTG 
Sbjct: 361 VQKADIQRGMVLSKPGTITPHTKFLAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGK 420

Query: 421 VTSIMNDKDEESKMVMPGDRVKMVVQLIMPVACEQGMRFAIREGGKTVGAGVIQAIIE 470
           VTSIMNDKDEESKMVMPGDRVKMVV+LIMPVACEQGMRFAIREGGKTVGAGVIQ+IIE
Sbjct: 421 VTSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 478

[Close]

BLAST of Sed0028001 vs. ExPASy TrEMBL
Match: A0A5A7URR7 (Elongation factor Tu OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001070 PE=3 SV=1)

HSP 1 Score: 826.6 bits (2134), Expect = 5.1e-236
Identity = 437/485 (90.10%), Postives = 450/485 (92.78%), Query Frame = 0


Query: 1   MAAISLA--STSSKLNFPHPSSSS--------------FAKPSSVTNLSSPFLNPSSIRP 60
           MAAISLA  STSSKL FPHPSSS               F+KPSS  NLSS FLN SSIRP
Sbjct: 1   MAAISLASVSTSSKLVFPHPSSSPSPSPSSSSSPSSSLFSKPSS--NLSSSFLNSSSIRP 60

Query: 61  LTFSSSNSATVTRPRSFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAP 120
            +FS   S +V RPRS T+RAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAP
Sbjct: 61  FSFS---SPSVNRPRSLTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAP 120

Query: 121 KKYDEIDAAPEERARGITINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAIL 180
           KKYDEIDAAPEERARGITINTATVEYETE+RHYAHVDCPGHADYVKNMITGAAQMDGAIL
Sbjct: 121 KKYDEIDAAPEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAIL 180

Query: 181 VVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDNELLELVELEMRELLSSYEFP 240
           VVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDD ELLELVELEMRELLSSYEFP
Sbjct: 181 VVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLELVELEMRELLSSYEFP 240

Query: 241 GDDVPITAGSALLALEALMANPNIGRGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLA 300
           GDDVPI AGSALLALEALMAN NI RGENEWVDKIFELMD+VDSYIPIPERQTDLPFLLA
Sbjct: 241 GDDVPIIAGSALLALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLA 300

Query: 301 VEDVFSITGRGTVATGRVERGTVRVGETVDIVGLKETRNTTVTGVEMFQKILDEALAGDN 360
           VEDVFSITGRGTVATGRVERGTVRVGETVDIVGL+ETRNTTVTGVEMFQKILDEALAGDN
Sbjct: 301 VEDVFSITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDN 360

Query: 361 VGLLLRGVQKTDIQRGMVLSKPGSITPHTKFSAVVYVLKKEEGGRHSPFFSGYRPQFYMR 420
           VGLLLRGVQK DIQRGMVL+KPG+ITPHTKFSAVVYVLKKEEGGRHSPFF+GYRPQFYMR
Sbjct: 361 VGLLLRGVQKADIQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMR 420

Query: 421 TTDVTGTVTSIMNDKDEESKMVMPGDRVKMVVQLIMPVACEQGMRFAIREGGKTVGAGVI 470
           TTDVTG V+SIMNDKDEESKMVMPGDRVKMVV+LIMPVACEQGMRFAIREGGKTVGAGVI
Sbjct: 421 TTDVTGKVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVI 480

[Close]

BLAST of Sed0028001 vs. ExPASy TrEMBL
Match: A0A1S3CLM5 (Elongation factor Tu OS=Cucumis melo OX=3656 GN=LOC103502373 PE=3 SV=1)

HSP 1 Score: 826.6 bits (2134), Expect = 5.1e-236
Identity = 437/485 (90.10%), Postives = 450/485 (92.78%), Query Frame = 0


Query: 1   MAAISLA--STSSKLNFPHPSSSS--------------FAKPSSVTNLSSPFLNPSSIRP 60
           MAAISLA  STSSKL FPHPSSS               F+KPSS  NLSS FLN SSIRP
Sbjct: 1   MAAISLASVSTSSKLVFPHPSSSPSPSPSSSSSPSSSLFSKPSS--NLSSSFLNSSSIRP 60

Query: 61  LTFSSSNSATVTRPRSFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAP 120
            +FS   S +V RPRS T+RAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAP
Sbjct: 61  FSFS---SPSVNRPRSLTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAP 120

Query: 121 KKYDEIDAAPEERARGITINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAIL 180
           KKYDEIDAAPEERARGITINTATVEYETE+RHYAHVDCPGHADYVKNMITGAAQMDGAIL
Sbjct: 121 KKYDEIDAAPEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAIL 180

Query: 181 VVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDNELLELVELEMRELLSSYEFP 240
           VVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDD ELLELVELEMRELLSSYEFP
Sbjct: 181 VVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLELVELEMRELLSSYEFP 240

Query: 241 GDDVPITAGSALLALEALMANPNIGRGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLA 300
           GDDVPI AGSALLALEALMAN NI RGENEWVDKIFELMD+VDSYIPIPERQTDLPFLLA
Sbjct: 241 GDDVPIIAGSALLALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLA 300

Query: 301 VEDVFSITGRGTVATGRVERGTVRVGETVDIVGLKETRNTTVTGVEMFQKILDEALAGDN 360
           VEDVFSITGRGTVATGRVERGTVRVGETVDIVGL+ETRNTTVTGVEMFQKILDEALAGDN
Sbjct: 301 VEDVFSITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDN 360

Query: 361 VGLLLRGVQKTDIQRGMVLSKPGSITPHTKFSAVVYVLKKEEGGRHSPFFSGYRPQFYMR 420
           VGLLLRGVQK DIQRGMVL+KPG+ITPHTKFSAVVYVLKKEEGGRHSPFF+GYRPQFYMR
Sbjct: 361 VGLLLRGVQKADIQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMR 420

Query: 421 TTDVTGTVTSIMNDKDEESKMVMPGDRVKMVVQLIMPVACEQGMRFAIREGGKTVGAGVI 470
           TTDVTG V+SIMNDKDEESKMVMPGDRVKMVV+LIMPVACEQGMRFAIREGGKTVGAGVI
Sbjct: 421 TTDVTGKVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVI 480

[Close]

BLAST of Sed0028001 vs. TAIR 10
Match: AT4G20360.1 (RAB GTPase homolog E1B )

HSP 1 Score: 729.6 bits (1882), Expect = 1.6e-210
Identity = 378/475 (79.58%), Postives = 423/475 (89.05%), Query Frame = 0


Query: 1   MAAISLASTSSKL--NFPHPSSSSFAKPSSVTNLSSPFLNPSSIRPLTFSSSNSATVTRP 60
           ++A +  S+SS++  ++  PS S     S+   L +  L+ S +   + ++++++  TR 
Sbjct: 3   ISAPAACSSSSRILCSYSSPSPSLCPAISTSGKLKTLTLSSSFLPSYSLTTTSASQSTR- 62

Query: 61  RSFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMAL----SKAPKKYDEIDAAP 120
           RSFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMAL    S   KKYDEIDAAP
Sbjct: 63  RSFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDEIDAAP 122

Query: 121 EERARGITINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP 180
           EERARGITINTATVEYETE RHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP
Sbjct: 123 EERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP 182

Query: 181 QTKEHILLAKQVGVPNMVVFLNKKDQVDDNELLELVELEMRELLSSYEFPGDDVPITAGS 240
           QTKEHILLAKQVGVP+MVVFLNK+DQVDD ELLELVELE+RELLSSYEF GDD+PI +GS
Sbjct: 183 QTKEHILLAKQVGVPDMVVFLNKEDQVDDAELLELVELEVRELLSSYEFNGDDIPIISGS 242

Query: 241 ALLALEALMANPNIGRGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVEDVFSITGR 300
           ALLA+E L  NP + RG+N+WVDKI+ELMD+VD YIPIP+RQT+LPFLLAVEDVFSITGR
Sbjct: 243 ALLAVETLTENPKVKRGDNKWVDKIYELMDAVDDYIPIPQRQTELPFLLAVEDVFSITGR 302

Query: 301 GTVATGRVERGTVRVGETVDIVGLKETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQK 360
           GTVATGRVERGTV+VGETVD+VGL+ETR+ TVTGVEMFQKILDEALAGDNVGLLLRG+QK
Sbjct: 303 GTVATGRVERGTVKVGETVDLVGLRETRSYTVTGVEMFQKILDEALAGDNVGLLLRGIQK 362

Query: 361 TDIQRGMVLSKPGSITPHTKFSAVVYVLKKEEGGRHSPFFSGYRPQFYMRTTDVTGTVTS 420
            DIQRGMVL+KPGSITPHTKF A++YVLKKEEGGRHSPFF+GYRPQFYMRTTDVTG VT 
Sbjct: 363 ADIQRGMVLAKPGSITPHTKFEAIIYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTK 422

Query: 421 IMNDKDEESKMVMPGDRVKMVVQLIMPVACEQGMRFAIREGGKTVGAGVIQAIIE 470
           IMNDKDEESKMVMPGDRVK+VV+LI+PVACEQGMRFAIREGGKTVGAGVI  I+E
Sbjct: 423 IMNDKDEESKMVMPGDRVKIVVELIVPVACEQGMRFAIREGGKTVGAGVIGTILE 476

[Close]

BLAST of Sed0028001 vs. TAIR 10
Match: AT4G02930.1 (GTP binding Elongation factor Tu family protein )

HSP 1 Score: 516.2 bits (1328), Expect = 2.8e-146
Identity = 289/475 (60.84%), Postives = 340/475 (71.58%), Query Frame = 0


Query: 1   MAAISLASTSSKLNFPHPSSSSFAKPSSVTNLSSPFLNPSSIRPLTFSSSNSATVTRPRS 60
           MA++ L + SSK   P  S       +SVT   S +    SI     SSS   T +  RS
Sbjct: 1   MASVVLRNPSSKRLVPFSSQIYSRCGASVT---SSYSISHSIGGDDLSSSTFGTSSFWRS 60

Query: 61  FTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPK----KYDEIDAAPEE 120
                    F R KPHVN+GTIGHVDHGKTTLTAA+T  L++  K     +DEID APEE
Sbjct: 61  MAT------FTRNKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEE 120

Query: 121 RARGITINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQT 180
           + RGITI TA VEYET  RHYAHVDCPGHADYVKNMITGAAQMDG ILVVSG DGPMPQT
Sbjct: 121 KKRGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMPQT 180

Query: 181 KEHILLAKQVGVPNMVVFLNKKDQVDDNELLELVELEMRELLSSYEFPGDDVPITAGSAL 240
           KEHILLA+QVGVP++V FLNK D VDD ELLELVE+E+RELLS Y+FPGDD+PI  GSAL
Sbjct: 181 KEHILLARQVGVPSLVCFLNKVDVVDDPELLELVEMELRELLSFYKFPGDDIPIIRGSAL 240

Query: 241 LALEALMANPNIGRGENEWVDKIFELMDSVDSYIPIPERQTDLPFLLAVEDVFSITGRGT 300
            AL+    N  IGR        I +LMD+VD YIP P R  D PFL+ +EDVFSI GRGT
Sbjct: 241 SALQG--TNDEIGR------QAILKLMDAVDEYIPDPVRVLDKPFLMPIEDVFSIQGRGT 300

Query: 301 VATGRVERGTVRVGETVDIVGLKE---TRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQ 360
           VATGR+E+G ++VGE V+I+GL+E      +TVTGVEMF+KILD   AGDNVGLLLRG++
Sbjct: 301 VATGRIEQGVIKVGEEVEILGLREGGVPLKSTVTGVEMFKKILDNGQAGDNVGLLLRGLK 360

Query: 361 KTDIQRGMVLSKPGSITPHTKFSAVVYVLKKEEGGRHSPFFSGYRPQFYMRTTDVTGTVT 420
           + DIQRGMV++KPGS   + KF A +YVL K+EGGRH+ FFS YRPQFY+RT D+TG V 
Sbjct: 361 REDIQRGMVIAKPGSCKTYKKFEAEIYVLTKDEGGRHTAFFSNYRPQFYLRTADITGKV- 420

Query: 421 SIMNDKDEESKMVMPGDRVKMVVQLIMPVACEQGMRFAIREGGKTVGAGVIQAII 469
               +  E  KMVMPGD V  V +LIMPV  E G RFA+REGG+TVGAGV+  ++
Sbjct: 421 ----ELPENVKMVMPGDNVTAVFELIMPVPLETGQRFALREGGRTVGAGVVSKVM 453

[Close]

BLAST of Sed0028001 vs. TAIR 10
Match: AT1G07920.1 (GTP binding Elongation factor Tu family protein )

HSP 1 Score: 158.7 bits (400), Expect = 1.2e-38
Identity = 130/443 (29.35%), Postives = 195/443 (44.02%), Query Frame = 0


Query: 72  RKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDE-------------------IDA 131
           ++K H+NI  IGHVD GK+T T  L   L    K+  E                   +D 
Sbjct: 3   KEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDK 62

Query: 132 APEERARGITINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGP 191
              ER RGITI+ A  ++ET   +   +D PGH D++KNMITG +Q D A+L++    G 
Sbjct: 63  LKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGG 122

Query: 192 MP-------QTKEHILLAKQVGVPNMVVFLNKKDQVD---DNELLELVELEMRELLSSYE 251
                    QT+EH LLA  +GV  M+   NK D           + +  E+   L    
Sbjct: 123 FEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVG 182

Query: 252 FPGDDVPITAGSALLALEALMANPNIGRGENEWV--DKIFELMDSVDSYIPIPERQTDLP 311
           +  D +P    S       +  + N+     +W     + E +D ++     P+R +D P
Sbjct: 183 YNPDKIPFVPISGFEGDNMIERSTNL-----DWYKGPTLLEALDQINE----PKRPSDKP 242

Query: 312 FLLAVEDVFSITGRGTVATGRVERGTVRVGETVDIVGLKETRNTTVTGVEMFQKILDEAL 371
             L ++DV+ I G GTV  GRVE G ++ G  V       T  T V  VEM  + L EAL
Sbjct: 243 LRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLT--TEVKSVEMHHESLLEAL 302

Query: 372 AGDNVGLLLRGVQKTDIQRGMVL--SKPGSITPHTKFSAVVYVLKKEEGGRHSPFFSGYR 431
            GDNVG  ++ V   D++RG V   SK         F++ V ++            +GY 
Sbjct: 303 PGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIM-----NHPGQIGNGYA 362

Query: 432 PQFYMRTTDVTGTVTSIMNDKD--------EESKMVMPGDRVKMVVQLIMPVACEQGM-- 468
           P     T+ +    + I+   D        +E K +  GD   + +    P+  E     
Sbjct: 363 PVLDCHTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEY 422

[Close]

BLAST of Sed0028001 vs. TAIR 10
Match: AT1G07930.1 (GTP binding Elongation factor Tu family protein )

HSP 1 Score: 158.7 bits (400), Expect = 1.2e-38
Identity = 130/443 (29.35%), Postives = 195/443 (44.02%), Query Frame = 0


Query: 72  RKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDE-------------------IDA 131
           ++K H+NI  IGHVD GK+T T  L   L    K+  E                   +D 
Sbjct: 3   KEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDK 62

Query: 132 APEERARGITINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGP 191
              ER RGITI+ A  ++ET   +   +D PGH D++KNMITG +Q D A+L++    G 
Sbjct: 63  LKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGG 122

Query: 192 MP-------QTKEHILLAKQVGVPNMVVFLNKKDQVD---DNELLELVELEMRELLSSYE 251
                    QT+EH LLA  +GV  M+   NK D           + +  E+   L    
Sbjct: 123 FEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVG 182

Query: 252 FPGDDVPITAGSALLALEALMANPNIGRGENEWV--DKIFELMDSVDSYIPIPERQTDLP 311
           +  D +P    S       +  + N+     +W     + E +D ++     P+R +D P
Sbjct: 183 YNPDKIPFVPISGFEGDNMIERSTNL-----DWYKGPTLLEALDQINE----PKRPSDKP 242

Query: 312 FLLAVEDVFSITGRGTVATGRVERGTVRVGETVDIVGLKETRNTTVTGVEMFQKILDEAL 371
             L ++DV+ I G GTV  GRVE G ++ G  V       T  T V  VEM  + L EAL
Sbjct: 243 LRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLT--TEVKSVEMHHESLLEAL 302

Query: 372 AGDNVGLLLRGVQKTDIQRGMVL--SKPGSITPHTKFSAVVYVLKKEEGGRHSPFFSGYR 431
            GDNVG  ++ V   D++RG V   SK         F++ V ++            +GY 
Sbjct: 303 PGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIM-----NHPGQIGNGYA 362

Query: 432 PQFYMRTTDVTGTVTSIMNDKD--------EESKMVMPGDRVKMVVQLIMPVACEQGM-- 468
           P     T+ +    + I+   D        +E K +  GD   + +    P+  E     
Sbjct: 363 PVLDCHTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEY 422

[Close]

BLAST of Sed0028001 vs. TAIR 10
Match: AT1G07940.1 (GTP binding Elongation factor Tu family protein )

HSP 1 Score: 158.7 bits (400), Expect = 1.2e-38
Identity = 130/443 (29.35%), Postives = 195/443 (44.02%), Query Frame = 0


Query: 72  RKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDE-------------------IDA 131
           ++K H+NI  IGHVD GK+T T  L   L    K+  E                   +D 
Sbjct: 3   KEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDK 62

Query: 132 APEERARGITINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGP 191
              ER RGITI+ A  ++ET   +   +D PGH D++KNMITG +Q D A+L++    G 
Sbjct: 63  LKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGG 122

Query: 192 MP-------QTKEHILLAKQVGVPNMVVFLNKKDQVD---DNELLELVELEMRELLSSYE 251
                    QT+EH LLA  +GV  M+   NK D           + +  E+   L    
Sbjct: 123 FEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVG 182

Query: 252 FPGDDVPITAGSALLALEALMANPNIGRGENEWV--DKIFELMDSVDSYIPIPERQTDLP 311
           +  D +P    S       +  + N+     +W     + E +D ++     P+R +D P
Sbjct: 183 YNPDKIPFVPISGFEGDNMIERSTNL-----DWYKGPTLLEALDQINE----PKRPSDKP 242

Query: 312 FLLAVEDVFSITGRGTVATGRVERGTVRVGETVDIVGLKETRNTTVTGVEMFQKILDEAL 371
             L ++DV+ I G GTV  GRVE G ++ G  V       T  T V  VEM  + L EAL
Sbjct: 243 LRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGLT--TEVKSVEMHHESLLEAL 302

Query: 372 AGDNVGLLLRGVQKTDIQRGMVL--SKPGSITPHTKFSAVVYVLKKEEGGRHSPFFSGYR 431
            GDNVG  ++ V   D++RG V   SK         F++ V ++            +GY 
Sbjct: 303 PGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIM-----NHPGQIGNGYA 362

Query: 432 PQFYMRTTDVTGTVTSIMNDKD--------EESKMVMPGDRVKMVVQLIMPVACEQGM-- 468
           P     T+ +    + I+   D        +E K +  GD   + +    P+  E     
Sbjct: 363 PVLDCHTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEY 422

The following BLAST results are available for this feature:

BLAST of Sed0028001 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022933691.1	1.4e-243	93.46	elongation factor Tu, chloroplastic-like [Cucurbita moschata] >KAG7021422.1 Elon...	[more]
KAG6587440.1	1.8e-243	93.46	Elongation factor Tu, chloroplastic, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_023530750.1	2.0e-242	93.04	elongation factor Tu, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
XP_023004504.1	2.0e-242	92.83	elongation factor Tu, chloroplastic-like [Cucurbita maxima]	[more]
XP_022135255.1	4.9e-241	91.63	elongation factor Tu, chloroplastic [Momordica charantia]	[more]

BLAST of Sed0028001 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q43467	4.5e-221	83.82	Elongation factor Tu, chloroplastic OS=Glycine max OX=3847 GN=TUFA PE=3 SV=1	[more]
P46280	7.6e-221	83.23	Elongation factor Tu, chloroplastic OS=Glycine max OX=3847 GN=TUFB1 PE=3 SV=1	[more]
Q43364	1.5e-216	81.70	Elongation factor TuB, chloroplastic OS=Nicotiana sylvestris OX=4096 GN=TUFB PE=...	[more]
O24310	6.3e-215	80.12	Elongation factor Tu, chloroplastic OS=Pisum sativum OX=3888 GN=tufA PE=2 SV=1	[more]
Q40450	8.2e-215	82.46	Elongation factor TuA, chloroplastic OS=Nicotiana sylvestris OX=4096 GN=TUFA PE=...	[more]

BLAST of Sed0028001 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EZS3	6.7e-244	93.46	Elongation factor Tu OS=Cucurbita moschata OX=3662 GN=LOC111441027 PE=3 SV=1	[more]
A0A6J1KWG0	9.6e-243	92.83	Elongation factor Tu OS=Cucurbita maxima OX=3661 GN=LOC111497788 PE=3 SV=1	[more]
A0A6J1C0N2	2.4e-241	91.63	Elongation factor Tu OS=Momordica charantia OX=3673 GN=LOC111007263 PE=3 SV=1	[more]
A0A5A7URR7	5.1e-236	90.10	Elongation factor Tu OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350...	[more]
A0A1S3CLM5	5.1e-236	90.10	Elongation factor Tu OS=Cucumis melo OX=3656 GN=LOC103502373 PE=3 SV=1	[more]

BLAST of Sed0028001 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G20360.1	1.6e-210	79.58	RAB GTPase homolog E1B	[more]
AT4G02930.1	2.8e-146	60.84	GTP binding Elongation factor Tu family protein	[more]
AT1G07920.1	1.2e-38	29.35	GTP binding Elongation factor Tu family protein	[more]
AT1G07930.1	1.2e-38	29.35	GTP binding Elongation factor Tu family protein	[more]
AT1G07940.1	1.2e-38	29.35	GTP binding Elongation factor Tu family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000795	Translational (tr)-type GTP-binding domain	PRINTS	PR00315	ELONGATNFCT	coord: 138..148 score: 63.79 coord: 191..200 score: 51.85 coord: 78..91 score: 76.82 coord: 154..165 score: 66.17 coord: 118..126 score: 70.58
IPR000795	Translational (tr)-type GTP-binding domain	PFAM	PF00009	GTP_EFTU	coord: 74..271 e-value: 8.1E-54 score: 182.1
IPR000795	Translational (tr)-type GTP-binding domain	PROSITE	PS51722	G_TR_2	coord: 74..274 score: 58.598885
IPR004541	Translation elongation factor EFTu/EF1A, bacterial/organelle	TIGRFAM	TIGR00485	TIGR00485	coord: 66..469 e-value: 6.2E-222 score: 734.3
IPR004541	Translation elongation factor EFTu/EF1A, bacterial/organelle	HAMAP	MF_00118_B	EF_Tu_B	coord: 65..469 score: 58.703056
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 77..208 e-value: 7.1E-16 score: 56.4
None	No IPR available	GENE3D	2.40.30.10	Translation factors	coord: 276..404 e-value: 1.4E-53 score: 182.2
None	No IPR available	GENE3D	2.40.30.10	Translation factors	coord: 408..468 e-value: 7.9E-23 score: 82.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	PANTHER	PTHR43721:SF21	ELONGATION FACTOR TU	coord: 31..469
None	No IPR available	PANTHER	PTHR43721	ELONGATION FACTOR TU-RELATED	coord: 31..469
None	No IPR available	CDD	cd03707	EFTU_III	coord: 370..464 e-value: 4.36759E-55 score: 176.548
IPR004160	Translation elongation factor EFTu/EF1A, C-terminal	PFAM	PF03143	GTP_EFTU_D3	coord: 368..467 e-value: 1.9E-39 score: 134.2
IPR004161	Translation elongation factor EFTu-like, domain 2	PFAM	PF03144	GTP_EFTU_D2	coord: 295..363 e-value: 1.2E-17 score: 64.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 66..273 e-value: 3.2E-70 score: 237.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 69..289
IPR031157	Tr-type G domain, conserved site	PROSITE	PS00301	G_TR_1	coord: 111..126
IPR041709	Elongation factor Tu (EF-Tu), GTP-binding domain	CDD	cd01884	EF_Tu	coord: 75..273 e-value: 3.30296E-118 score: 342.641
IPR033720	Elongation factor Tu, domain 2	CDD	cd03697	EFTU_II	coord: 281..367 e-value: 3.18145E-51 score: 166.54
IPR009001	Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal	SUPERFAMILY	50465	EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain	coord: 368..468
IPR009000	Translation protein, beta-barrel domain superfamily	SUPERFAMILY	50447	Translation proteins	coord: 275..371

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0028001.1	Sed0028001.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070125	mitochondrial translational elongation
biological_process	GO:0006414	translational elongation
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0003746	translation elongation factor activity