Sed0027995 (gene) Chayote v1

Overview


Name	Sed0027995
Type	gene
Organism	Sechium edule (Chayote v1)
Description	RNA-binding KH domain-containing protein
Location	LG03: 44769608 .. 44775068 (-)
RNA-Seq Expression	Sed0027995
Synteny	Sed0027995

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACCAACACAGCTACCGAGAATGGCTCCACTGAACCTTCCATTCTCGCCTCCGCAATCGCTCCGGAATCGGCGTTTACGGACGCCGGCGGCTCCGAATTCGACCTAGATCCCTCCAACCTCGAGGACTACCTGTCGGCTCCGCCTTCGGATTCCGCTGCTCACGCCAAGTGGCCTGGCTGGCCCGGAGACTGCGTCTTTCGCCTTATCGTGCCGGTCGTTAAAGTCGGCAGCATCATTGGGCGCAAGGGCGATATTATCAGGAAGCTCTGCGAGGAAACTAGGGCTAGGATTCGCGTTCTTGATGGCGCGGTTGGCACTCCTGATCGCGTTGTGAGTGATTTCTTTCTTTCTGGCTTGTTTCGATTTGTTCATTTTAATTTCTTTTCTTTTTCGTGCCCATTCTACCATTTTGGCTGGTTCCTTCGATTTTAAACTTCAGCCATAATGGAATTTTTAGCTACTTCATTAGGAGAAACAGCTTGGAGCCTGTTCCATGGTGGTATTAGGATCTTATAACTTGAATTGAATTAAGACTTTGGGAGTTCCCAAGGGGTGGTGCAGTGGTTGAAGACTTGGGCTTCGAGGGTATGCTTCCCTCAAGGTCCTAGGTTCGAGACTCACCTGTGACACTACTCTTTCGAAGGGTTGCTGTATGATTATACTTTTTGTTAGGCTAAACTATTGTTTAATGATAATCCAAATTAATACTATGATCATAGTTTCGATCCCAAAAAATCGATTTATTTCAGATTTATAGTCTCTCCCTTCATTTTTACTTAAGAAAAGTTTCTTATGAATTTTATTTTAAAAAGATTACTCCTTTATTTATATACATACATTCTAAAATTGTATTTACATTGTATAACCATAATTATTAGGATCTTATAACTTGAATTAAATTAAGACTTAGGGGAAAAAGGGTTGCTGTATGATTGTATTTTTTGTTAGGCTAAACTATTCTGGATTGGAATGGAATCCTTTTTTTTTCTTTACATAGTTAGTCTAGGTTTTATTTGGGCTCCTTCCTTTGTTGGGTTGTCTTTTAACATGCTATGTATTCTTTCCATTTTCTCAACGAAAGCCTGGTTTTCCATTGAAAAGAATGAAGGCTTGATGTTGATGCTAAATTTCAATGTTTTGGTTGGCCATTAACTTCCTTAAATGATAAATCTTGTGTTTGTGTATAGCCATAGGATGTTTTTTTTTATTTACTTTATTTTGTTTCTGAGCAGTCTCTTTCTTATTGTCGTTTAATTTTAGAAAGGGTGATATATATACTTAGTTTGTTTTGATTGTGAACTTTATACTTGGATGCATTTGTGTACCATTTCAATTTCTTTTAAGTTTGAGAACTTGTTGAAACTTGTTCGTTTAGTTTTTAATGTTGAATGTTTGCCTTTTCAGGTGCTAATCTCAGGAAAAGAAGAGCAAGAGTCTGCCCTTTCTCCTGCAATGGATGCAGTTATAAGAGTCTTCAAACGTGTATCTGGATTTTCTGAGAATGAAGAAGAGGCTAAAGCTTCATTTTGTTCAATCCGTTTACTGGCGGCGTCTACTCAAGCAATCAGTCTTATTGGAAAGCAGGGTTCGTTAATCAAATCAATACAGGAGGGTACAGGAGCTTCTGTGAGAGTACTATCAGGAGGTATGCTTTGCTTTCATTCATTGTATTTTACTTGTCAGGATGTTCTGAACTTCTGCTTCTGCTAATTGGTTTTAGGCCTAGTCTTATATTATTTTCAAAGATCATGAAATCTACCAACAGCTAAATTGCAAAGTATTCGACTGGAGAGGTGATTTGGTTCGGAAGAATTGATTTTTGTTCCCCAAGTTTGACCACTTTAAGACACTTTTTTTTTAAAAAAACAAACCTCTTCTTTTACAATAACCCTATCTTACTGTCTTCTGGTTTAGCTTCCTTAATGGTAAATGCTTACCTTTTCCTTTCCGAAAGGAGAAGGGCCCTTGAGGTCAAAACTCTTTTTATTCATTAGCCCGTTGAGAAGAGTTGAGAAAAAGCTTCTCTTGTGCTATTTTGACACTTTTGTTTTAAAGGATTAGACTTGGTAATTAAAGAGAATAATGATTTTTTTTTTCTCCATGATTTATCATAGGTGTTTTATTTGTTGAAATTAAACAATTAATAAAAATCCTATGGTTCGGTCCTTTTGTAATTTTATACATATTTTGATAGGAATGGATACTTTCATTGATAAGTGAGAAATTATAATGAAGTCCCATTGGAACAAGTTATAAAAATCATCTCTGTGAGATAGATCATAATCACAAAAAGGGTGTAATCTATGACACCAAAAAAGAGTTAGGTAGTTGGTAGATTAGATAATAGTATCAATAGATTGCTCCTTGTGCTTGATGATACGACTATTTCTTTCCATCCATATATCCAAATTCCAAACGAAAGCTTGAATGAAGAATTCCAGAAGGATTTTTTTACTCATTCTTGAAGGGACAACCATCAAGAGAGAAATCAATAAGGTAGTGAAAGTTTCCAGGCCTTGCCCTCATCTTCACATAAAAGATGAAAGGACTTTGTTCCAAAATGTCGTTGGAAGAGGACACTGGCTGAAAAGATGAATCTTGGTTTCATCGTTCCTTTTGCAACAAGGACAGCAGCTAGGTGAAAGAGATATCAATGGAGATTTTTTCTGGAAGAATCCTGGTATTTATCGCTGCATGACTTAGCTCCCATATGAAGAACTCAATTTTCGTTGGATGTGGTTCCTTCACAGATGAGCATGTATCCCTTTTTTTTCCCCTTGAATGGTCGGTCATTGGCTTCTATTTTAGCAAGATATTTGGCCAGAGAACCAGATGAGAAATTTCCATCATTTTCTAATCTCCAAATCCATTTCTTCACTAACAGAGGGTGCAGCCGCCGAAATAATAGAGGATAGACAAGGCCATTCATTAGATTCAGCCTCTGTGAGATGCCTTCTCATATGTAAATCCCATGTCTTGGCTTCAGGGGACCATAAGTCAGCAACAGTAGCTGTGAAATTATTTATTATACTTATATAAAAACAATTAATCAAAATCAGTTGGGTAGAAACTACCGGGTTAAAATGATAGTTCGTCGAAGCTATTGCTAACTCTCTATAGATGACACCGTCACCCTCATCTAGTGTGAAATCATTTTAGGTTCGGCTAACTTTGATCACAACATCTATAATCAAATTTTCTCATCGTTTATTGAGAACAAATTGTGAATCCATTCTAATAACTGCTAATGAGCTTGAAAAATAGGCTAATAGCTGAGTTCCTTTCAACCCAAGGAATGTTTTGTGTGGTGAATTGTGTGGTGAATTGCTTGAAAAATAGGCTGATAACTGCTAATGAGCTTGATAAATAGGCTAATAGCTTGAAAAAAAAAAGAGAAAAAAGTCTGAATCTAGAAATATGATTTTGTGTGGTGAATTGCAACCAAGGTTCATAAAATTGTGGGGTTTTAGGTTTTAGCATTAGGAATTTTTTTTATGTCTGAGACCTTTTATTTAACTGGACCTCATTGCTAGCTATATGTTTTTTAAATTAGTTTATCTTTTTTCATTTCCAATGGGCAATGGGTGATCTTTCTTGTAATCACCCGTAGGTGTACAAACTATTTTTCAATCATTTCATTCATCAATGAAATTGTTTCTTATTCCATAATTAAATAAAATATATTCAAAAGTGGCAATAAATCATCTCTTCATAATTGGAGGATGCAGTCTTGGTTCTTTCTCGAGTTTTATGGTCATCTTAAAGAAGCATACTTAATCTGATTTATTAACATCTTTCTCTTGCTGATACATGGTATAAAGGTGACCTTAAAGGCTTAAACTAAAAGTTCATGACAATAACTATTTTTTTACCTCAATTTTATTGCAATAAATCAAGTGACCAAGCATGATGACTTGTAACTTCAAGCCTTGAGCTTCGGTCAGCAGGTGCAAGCAACTAATAATATCCTGAGATAATAATAATACATTTCCTGCTATAGTCAATTATTTATGAGTATTGAGTACTCTTTGAACATTCTCCTACTTATCTTATCTTCTACATTGGATGCTTGCAGATGAGATGCCATTCTATGCTGGTGCAGACGAGAGAATCGTGGAATTGCAGGGAGAATCCTTAAAGGTTCTCATGGCTCTAGAGGGAGTGATAGGCCACCTTAGAAAGTTTCTTGTTGATCGTAGTGTTCTTCCTCTGTTTGAAAAGAGTGTACGTGTTTTCTTCTTCTGTTTATGTTCGACCTATTCTTTTACGATATTTTAGGTCTGCTAATGAGTTGTTACTACGTTTTTTTTAGTTCAATGCGACTGCCACACAAGATCGTCAAACGGAAACCTGGGCTGATAAGTCGTCACTTCTTACTGCGTCTCAAAGTGTAATCTCCACGGAGTATCCTCCCTCAATTAAAAGAGAATCTATCTTTCTTGAACGAGACACTCATCTTGATTCTCATATTCCATCCTCTGGTATTTCTCTCTATGGACAACACGATAGAGTACTTCCTTCAATTCGATCATCAGGTGTTGCTCGCTCTGGTGTGCCTTTCGTAACTCAGGTTGGTATATGTAGTTATTGATAGAAGGAAATGGTCCCTGTTGATTTAGGCCTTAGCAAGGTAGCTTACTATCCCATTTACGGACCTTCATAATGAAACAAGAGAAAACCAATCTAGCATTGCATGTCCATTATTGCATTTAAGGTGTTTTTTTTTTCATCTTCAGGTCCAGGCAAGCTAGAAGCTTGCCAGCTTTACATGTTCATCGTGTCTTGAAAACAACACTTAGTCCATCCATAATGTTTCGCATATCGCATATAAGTATGATTTAGCATAACGCTGAATGGAAGCTGTGGGGCCTGACACTAGTTACAGAGTTTGTGTTAGTTATCTCATCACTGATCAAATCAACTCTTTGTGGTTCCTGTCAGGTTACTCAGACTATGCAGATCCCATTATCGTATGCCGAGGACATCATTGGAGTTGGAGGAGCAAATATTGCATTCATCCGTCGCAACAGTGGTGCCATCTTAACCATACAAGAGAGCAGGGGCTTACCGGACGAGATCACTGTGGAAATAAAAGGCACTTCATCACAAGTTCAGATGGCTCAACAATTAATTCAGGTAATATTTAAACAAGGCAGGCATGTGTCGATATTAGCTAATGTCGCACATATTCATGATTTAATTTTGTTTGTATACCCTACTGCACTTGTAGGAAGCAGTAAGTGCCCCAAAGGAACCCGTACCGAGCAGCAGCTATGGCAGGCTAGACATGGCAGGCCTTAGGTCATCCTACTCCCAGTTGGCTGCTCCAGGCTCTTCATCCTACTCCCAGTTGGCTGCTACAGGTTCATCCTACACTTCATCCTCTTTATCATCACAATCTTATGGTGGATATGGGTCTTCTGGTTTAGGAGGCTACAATACCTTTAGGCTCTGA

mRNA sequence

ATGGCGACCAACACAGCTACCGAGAATGGCTCCACTGAACCTTCCATTCTCGCCTCCGCAATCGCTCCGGAATCGGCGTTTACGGACGCCGGCGGCTCCGAATTCGACCTAGATCCCTCCAACCTCGAGGACTACCTGTCGGCTCCGCCTTCGGATTCCGCTGCTCACGCCAAGTGGCCTGGCTGGCCCGGAGACTGCGTCTTTCGCCTTATCGTGCCGGTCGTTAAAGTCGGCAGCATCATTGGGCGCAAGGGCGATATTATCAGGAAGCTCTGCGAGGAAACTAGGGCTAGGATTCGCGTTCTTGATGGCGCGGTTGGCACTCCTGATCGCGTTGTGCTAATCTCAGGAAAAGAAGAGCAAGAGTCTGCCCTTTCTCCTGCAATGGATGCAGTTATAAGAGTCTTCAAACGTGTATCTGGATTTTCTGAGAATGAAGAAGAGGCTAAAGCTTCATTTTGTTCAATCCGTTTACTGGCGGCGTCTACTCAAGCAATCAGTCTTATTGGAAAGCAGGGTTCGTTAATCAAATCAATACAGGAGGGTACAGGAGCTTCTGTGAGAGTACTATCAGGAGATGAGATGCCATTCTATGCTGGTGCAGACGAGAGAATCGTGGAATTGCAGGGAGAATCCTTAAAGGTTCTCATGGCTCTAGAGGGAGTGATAGGCCACCTTAGAAAGTTTCTTGTTGATCGTAGTGTTCTTCCTCTGTTTGAAAAGAGTTTCAATGCGACTGCCACACAAGATCGTCAAACGGAAACCTGGGCTGATAAGTCGTCACTTCTTACTGCGTCTCAAAGTGTAATCTCCACGGAGTATCCTCCCTCAATTAAAAGAGAATCTATCTTTCTTGAACGAGACACTCATCTTGATTCTCATATTCCATCCTCTGGTATTTCTCTCTATGGACAACACGATAGAGTACTTCCTTCAATTCGATCATCAGGTGTTGCTCGCTCTGGTGTGCCTTTCGTAACTCAGGTTACTCAGACTATGCAGATCCCATTATCGTATGCCGAGGACATCATTGGAGTTGGAGGAGCAAATATTGCATTCATCCGTCGCAACAGTGGTGCCATCTTAACCATACAAGAGAGCAGGGGCTTACCGGACGAGATCACTGTGGAAATAAAAGGCACTTCATCACAAGTTCAGATGGCTCAACAATTAATTCAGGAAGCAGTAAGTGCCCCAAAGGAACCCGTACCGAGCAGCAGCTATGGCAGGCTAGACATGGCAGGCCTTAGGTCATCCTACTCCCAGTTGGCTGCTCCAGGCTCTTCATCCTACTCCCAGTTGGCTGCTACAGGTTCATCCTACACTTCATCCTCTTTATCATCACAATCTTATGGTGGATATGGGTCTTCTGGTTTAGGAGGCTACAATACCTTTAGGCTCTGA

Coding sequence (CDS)

ATGGCGACCAACACAGCTACCGAGAATGGCTCCACTGAACCTTCCATTCTCGCCTCCGCAATCGCTCCGGAATCGGCGTTTACGGACGCCGGCGGCTCCGAATTCGACCTAGATCCCTCCAACCTCGAGGACTACCTGTCGGCTCCGCCTTCGGATTCCGCTGCTCACGCCAAGTGGCCTGGCTGGCCCGGAGACTGCGTCTTTCGCCTTATCGTGCCGGTCGTTAAAGTCGGCAGCATCATTGGGCGCAAGGGCGATATTATCAGGAAGCTCTGCGAGGAAACTAGGGCTAGGATTCGCGTTCTTGATGGCGCGGTTGGCACTCCTGATCGCGTTGTGCTAATCTCAGGAAAAGAAGAGCAAGAGTCTGCCCTTTCTCCTGCAATGGATGCAGTTATAAGAGTCTTCAAACGTGTATCTGGATTTTCTGAGAATGAAGAAGAGGCTAAAGCTTCATTTTGTTCAATCCGTTTACTGGCGGCGTCTACTCAAGCAATCAGTCTTATTGGAAAGCAGGGTTCGTTAATCAAATCAATACAGGAGGGTACAGGAGCTTCTGTGAGAGTACTATCAGGAGATGAGATGCCATTCTATGCTGGTGCAGACGAGAGAATCGTGGAATTGCAGGGAGAATCCTTAAAGGTTCTCATGGCTCTAGAGGGAGTGATAGGCCACCTTAGAAAGTTTCTTGTTGATCGTAGTGTTCTTCCTCTGTTTGAAAAGAGTTTCAATGCGACTGCCACACAAGATCGTCAAACGGAAACCTGGGCTGATAAGTCGTCACTTCTTACTGCGTCTCAAAGTGTAATCTCCACGGAGTATCCTCCCTCAATTAAAAGAGAATCTATCTTTCTTGAACGAGACACTCATCTTGATTCTCATATTCCATCCTCTGGTATTTCTCTCTATGGACAACACGATAGAGTACTTCCTTCAATTCGATCATCAGGTGTTGCTCGCTCTGGTGTGCCTTTCGTAACTCAGGTTACTCAGACTATGCAGATCCCATTATCGTATGCCGAGGACATCATTGGAGTTGGAGGAGCAAATATTGCATTCATCCGTCGCAACAGTGGTGCCATCTTAACCATACAAGAGAGCAGGGGCTTACCGGACGAGATCACTGTGGAAATAAAAGGCACTTCATCACAAGTTCAGATGGCTCAACAATTAATTCAGGAAGCAGTAAGTGCCCCAAAGGAACCCGTACCGAGCAGCAGCTATGGCAGGCTAGACATGGCAGGCCTTAGGTCATCCTACTCCCAGTTGGCTGCTCCAGGCTCTTCATCCTACTCCCAGTTGGCTGCTACAGGTTCATCCTACACTTCATCCTCTTTATCATCACAATCTTATGGTGGATATGGGTCTTCTGGTTTAGGAGGCTACAATACCTTTAGGCTCTGA

Protein sequence

MATNTATENGSTEPSILASAIAPESAFTDAGGSEFDLDPSNLEDYLSAPPSDSAAHAKWPGWPGDCVFRLIVPVVKVGSIIGRKGDIIRKLCEETRARIRVLDGAVGTPDRVVLISGKEEQESALSPAMDAVIRVFKRVSGFSENEEEAKASFCSIRLLAASTQAISLIGKQGSLIKSIQEGTGASVRVLSGDEMPFYAGADERIVELQGESLKVLMALEGVIGHLRKFLVDRSVLPLFEKSFNATATQDRQTETWADKSSLLTASQSVISTEYPPSIKRESIFLERDTHLDSHIPSSGISLYGQHDRVLPSIRSSGVARSGVPFVTQVTQTMQIPLSYAEDIIGVGGANIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEPVPSSSYGRLDMAGLRSSYSQLAAPGSSSYSQLAATGSSYTSSSLSSQSYGGYGSSGLGGYNTFRL

Homology

[Close]

BLAST of Sed0027995 vs. NCBI nr
Match: XP_038890982.1 (RNA-binding KH domain-containing protein PEPPER-like [Benincasa hispida])

HSP 1 Score: 724.5 bits (1869), Expect = 5.6e-205
Identity = 398/486 (81.89%), Postives = 422/486 (86.83%), Query Frame = 0


Query: 1   MATNTATENGST---------EPSILASAIAPESAFTDAGGSEFDLDPSNLEDYLSAPPS 60
           MAT T TENGST         + S L+S  A E   T+AGG+E D+DPSN EDYLS P S
Sbjct: 1   MATTTTTENGSTDANALNSNPQSSTLSSLAAAEPDSTEAGGTESDIDPSN-EDYLSVPAS 60

Query: 61  DSAAH----------AKWPGWPGDCVFRLIVPVVKVGSIIGRKGDIIRKLCEETRARIRV 120
           DSAA+           KWPGWPGDCVFRLIVPVVKVGSIIGRKGD+I+K+CEETRARIRV
Sbjct: 61  DSAAYEGPNHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRV 120

Query: 121 LDGAVGTPDRVVLISGKEEQESALSPAMDAVIRVFKRVSGFSENEEEAKASFCSIRLLAA 180
           LDGAVGTPDRVVLISGKEE ++ LSPAMDAVIRVFKRVSG SENE+EAKASFCSIRLL A
Sbjct: 121 LDGAVGTPDRVVLISGKEELDAPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVA 180

Query: 181 STQAISLIGKQGSLIKSIQEGTGASVRVLSGDEMPFYAGADERIVELQGESLKVLMALEG 240
           STQAI+LIGKQGSLIKSIQE TGASVRVLSGDEMPFYAGADER+VELQGESLKVL ALEG
Sbjct: 181 STQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEG 240

Query: 241 VIGHLRKFLVDRSVLPLFEKSFNATATQDRQTETWADKSSLLTASQSVISTEYPPSIKRE 300
           V+GHLRKFLVD SVLPLFEKSFN  A+QDRQ +TWADKSSLLTASQS+ISTEYPPS KRE
Sbjct: 241 VVGHLRKFLVDHSVLPLFEKSFNTPASQDRQMDTWADKSSLLTASQSIISTEYPPSTKRE 300

Query: 301 SIFLERDTHLDSHIPSSGISLYGQHDRVLPSIRSSGVARSGVPFVTQVTQTMQIPLSYAE 360
           S+FL+R+THLDSHIPSSGISLYGQ DRVLP+IRSSGV RSG P VTQVTQTMQIPLSYAE
Sbjct: 301 SLFLDRETHLDSHIPSSGISLYGQ-DRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAE 360

Query: 361 DIIGVGGANIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKE 420
           DIIGVGG NIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKE
Sbjct: 361 DIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKE 420

Query: 421 PVPSSSYGRLDMAGLRSSYSQLAAPGSSSYSQLAATGSSYTSSSLSSQSYGGYGSSGLGG 468
           PV SSSYGRLD  GLR           SSYSQLAA+GSSYTSSSLSSQSYGGYGSSGLGG
Sbjct: 421 PVTSSSYGRLDATGLR-----------SSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGG 473

[Close]

BLAST of Sed0027995 vs. NCBI nr
Match: TYK03085.1 (RNA-binding KH domain-containing protein PEPPER [Cucumis melo var. makuwa])

HSP 1 Score: 716.8 bits (1849), Expect = 1.2e-202
Identity = 394/483 (81.57%), Postives = 417/483 (86.34%), Query Frame = 0


Query: 1   MATNTATENGST------EPSILASAIAPESAFTDAGGSEFDLDPSNLEDYLSAPPSDSA 60
           MATNT T+NGST      + S L S  A E+  T+ G  + D+DPSN +DY S PPSDSA
Sbjct: 1   MATNTTTDNGSTDAIANPQSSTLPSLAAAEADSTEVGDDDSDIDPSN-QDYSSLPPSDSA 60

Query: 61  AH----------AKWPGWPGDCVFRLIVPVVKVGSIIGRKGDIIRKLCEETRARIRVLDG 120
           AH           KWPGWPGDCVFRLIVPVVKVGSIIGRKGD+I+K+CEETRARIRVLDG
Sbjct: 61  AHEPSSHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDG 120

Query: 121 AVGTPDRVVLISGKEEQESALSPAMDAVIRVFKRVSGFSENEEEAKASFCSIRLLAASTQ 180
           AVGTPDRVVLISGKEE +S LSPAMDAVIRVFKRVSG SENE+EAKASF SIRLL ASTQ
Sbjct: 121 AVGTPDRVVLISGKEELDSPLSPAMDAVIRVFKRVSGLSENEDEAKASFSSIRLLVASTQ 180

Query: 181 AISLIGKQGSLIKSIQEGTGASVRVLSGDEMPFYAGADERIVELQGESLKVLMALEGVIG 240
           AI+LIGKQGSLIKSIQE TGASVRVLSGDEMPFYAGADER+VELQGESLKVL ALEGV+G
Sbjct: 181 AINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVG 240

Query: 241 HLRKFLVDRSVLPLFEKSFNATATQDRQTETWADKSSLLTASQSVISTEYPPSIKRESIF 300
           HLRKFLVD SVLPLFEKSFN  A+QDRQTETWADKSSLLTASQS+IS EYPPS KRES+F
Sbjct: 241 HLRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYPPSTKRESLF 300

Query: 301 LERDTHLDSHIPSSGISLYGQHDRVLPSIRSSGVARSGVPFVTQVTQTMQIPLSYAEDII 360
           L+R+THLDSHI SSGISLYGQ DRVLP+IRSSGV RSG P VTQVTQTMQIPLSYAEDII
Sbjct: 301 LDRETHLDSHISSSGISLYGQ-DRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDII 360

Query: 361 GVGGANIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEPVP 420
           GVGG NIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAV+APKEPV 
Sbjct: 361 GVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEPVT 420

Query: 421 SSSYGRLDMAGLRSSYSQLAAPGSSSYSQLAATGSSYTSSSLSSQSYGGYGSSGLGGYNT 468
           SSSYGRLD  GLR           SSYSQLAA+GSSYTSSSLSSQSYGGYGSSGLGGY T
Sbjct: 421 SSSYGRLDTTGLR-----------SSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYTT 470

[Close]

BLAST of Sed0027995 vs. NCBI nr
Match: XP_004149510.2 (RNA-binding KH domain-containing protein PEPPER isoform X1 [Cucumis sativus] >KGN61176.1 hypothetical protein Csa_021288 [Cucumis sativus])

HSP 1 Score: 714.5 bits (1843), Expect = 5.8e-202
Identity = 394/483 (81.57%), Postives = 414/483 (85.71%), Query Frame = 0


Query: 1   MATNTATENGSTE------PSILASAIAPESAFTDAGGSEFDLDPSNLEDYLSAPPSDSA 60
           MATNT TENGST+       S L S  A E   T+AG  + D DPSN +DY S PPSDSA
Sbjct: 1   MATNTTTENGSTDAIPNPLSSTLPSLAAAEPDSTEAGDDDSDSDPSN-QDYSSVPPSDSA 60

Query: 61  AH----------AKWPGWPGDCVFRLIVPVVKVGSIIGRKGDIIRKLCEETRARIRVLDG 120
           AH           KWPGWPGDCVFRLIVPVVKVGSIIGRKGD+I+K+CEETRARIRVLDG
Sbjct: 61  AHEPSNHTGPSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDG 120

Query: 121 AVGTPDRVVLISGKEEQESALSPAMDAVIRVFKRVSGFSENEEEAKASFCSIRLLAASTQ 180
           AVGTPDRVVLISGKEE ES LSPAMDAVIRVFKRVSG SENE+EAKASFCSIRLL ASTQ
Sbjct: 121 AVGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQ 180

Query: 181 AISLIGKQGSLIKSIQEGTGASVRVLSGDEMPFYAGADERIVELQGESLKVLMALEGVIG 240
           AI+LIGKQGSLIKSIQE TGASVRVLSGDEMPFYAGADER+VELQGESLKVL ALEGV+G
Sbjct: 181 AINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVG 240

Query: 241 HLRKFLVDRSVLPLFEKSFNATATQDRQTETWADKSSLLTASQSVISTEYPPSIKRESIF 300
           HLRKFLVD SVLPLFEKSFN  A+QDRQTETWADKSSLLTASQS+IS EY PS KRES+F
Sbjct: 241 HLRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYAPSTKRESLF 300

Query: 301 LERDTHLDSHIPSSGISLYGQHDRVLPSIRSSGVARSGVPFVTQVTQTMQIPLSYAEDII 360
           L+R+ H DSHI SSGISLYGQ DRVLP+IRSSGV RSG P VTQVTQTMQIPLSYAEDII
Sbjct: 301 LDREAHFDSHISSSGISLYGQ-DRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDII 360

Query: 361 GVGGANIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEPVP 420
           GVGG NIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAV+APKEPV 
Sbjct: 361 GVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEPVT 420

Query: 421 SSSYGRLDMAGLRSSYSQLAAPGSSSYSQLAATGSSYTSSSLSSQSYGGYGSSGLGGYNT 468
           SSSYGRLD  GLR           SSYSQLAA+GSS+TSSSLSSQSYGGYGSSGLGGY T
Sbjct: 421 SSSYGRLDTTGLR-----------SSYSQLAASGSSFTSSSLSSQSYGGYGSSGLGGYTT 470

[Close]

BLAST of Sed0027995 vs. NCBI nr
Match: XP_022938096.1 (RNA-binding KH domain-containing protein PEPPER-like [Cucurbita moschata])

HSP 1 Score: 710.3 bits (1832), Expect = 1.1e-200
Identity = 387/483 (80.12%), Postives = 416/483 (86.13%), Query Frame = 0


Query: 1   MATNTATENGSTEPSILASA------IAPESAFTDAGGSEFDLDPSNLEDYLSAPPSDSA 60
           MATNT TENGST+   L S+       APE   T+A G+E  +DPSN +DYLSAP SDS 
Sbjct: 1   MATNTTTENGSTDADALNSSAQLAFEAAPEPDSTEASGAESGIDPSN-QDYLSAPASDSL 60

Query: 61  AH----------AKWPGWPGDCVFRLIVPVVKVGSIIGRKGDIIRKLCEETRARIRVLDG 120
            H           KWPGWPGDCVFRLIVPVVKVGSIIGR+GD+I+K+CEETRARIRVLDG
Sbjct: 61  PHESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDG 120

Query: 121 AVGTPDRVVLISGKEEQESALSPAMDAVIRVFKRVSGFSENEEEAKASFCSIRLLAASTQ 180
           AVGTPDRVVLISGKEE E+  SPAMDAV+RVFKRVSGFSENE+EAKASFCS+RLL ASTQ
Sbjct: 121 AVGTPDRVVLISGKEEPEAPFSPAMDAVLRVFKRVSGFSENEDEAKASFCSVRLLVASTQ 180

Query: 181 AISLIGKQGSLIKSIQEGTGASVRVLSGDEMPFYAGADERIVELQGESLKVLMALEGVIG 240
           AI+LIGKQGSLIKSIQE TGASVRVLSGDEMPFYAG DER+VELQGE+LKVL ALE V+G
Sbjct: 181 AINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELQGETLKVLKALEAVVG 240

Query: 241 HLRKFLVDRSVLPLFEKSFNATATQDRQTETWADKSSLLTASQSVISTEYPPSIKRESIF 300
           HLRKFLVD SVLPLFEKSFN  A+QDRQT++WADKSSLL+ASQSVISTEYPPS KRES+F
Sbjct: 241 HLRKFLVDHSVLPLFEKSFNTPASQDRQTDSWADKSSLLSASQSVISTEYPPSSKRESLF 300

Query: 301 LERDTHLDSHIPSSGISLYGQHDRVLPSIRSSGVARSGVPFVTQVTQTMQIPLSYAEDII 360
           L+R+THLDSHI SSGISLYG  DRVLP+IRSSGV RSGVP VTQVTQTMQIPLSYAEDII
Sbjct: 301 LDRETHLDSHISSSGISLYGP-DRVLPAIRSSGVGRSGVPIVTQVTQTMQIPLSYAEDII 360

Query: 361 GVGGANIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEPVP 420
           GVGGANIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEA+S PKEPV 
Sbjct: 361 GVGGANIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAISGPKEPVT 420

Query: 421 SSSYGRLDMAGLRSSYSQLAAPGSSSYSQLAATGSSYTSSSLSSQSYGGYGSSGLGGYNT 468
           SSSYGRLD  GLR           SSYSQL A+GSSYT SSLSSQSYGGYGSSGLGGY+T
Sbjct: 421 SSSYGRLDTTGLR-----------SSYSQLGASGSSYTPSSLSSQSYGGYGSSGLGGYST 470

[Close]

BLAST of Sed0027995 vs. NCBI nr
Match: XP_023538336.1 (RNA-binding KH domain-containing protein PEPPER-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 704.9 bits (1818), Expect = 4.6e-199
Identity = 383/483 (79.30%), Postives = 413/483 (85.51%), Query Frame = 0


Query: 1   MATNTATENGSTEPSILASA------IAPESAFTDAGGSEFDLDPSNLEDYLSAPPSDSA 60
           MATN  TENGST+   L S+       A E   T+AGG+E D+DPSN +DYLSAP SD  
Sbjct: 1   MATNATTENGSTDADALNSSPQLACEAAAEPDSTEAGGAESDIDPSN-QDYLSAPASDYV 60

Query: 61  AH----------AKWPGWPGDCVFRLIVPVVKVGSIIGRKGDIIRKLCEETRARIRVLDG 120
            H           KWPGWPGDCVFR+IVPVVKVGSIIGR+GD+I+K+CEETRARIRVLDG
Sbjct: 61  PHESPNHAGASDKKWPGWPGDCVFRIIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDG 120

Query: 121 AVGTPDRVVLISGKEEQESALSPAMDAVIRVFKRVSGFSENEEEAKASFCSIRLLAASTQ 180
           AVGTPDRVVLISGKEE E+ LSPAMDAV+R+FKRVSGFSENE+EAKASFCS+RLL ASTQ
Sbjct: 121 AVGTPDRVVLISGKEEPEAPLSPAMDAVLRIFKRVSGFSENEDEAKASFCSVRLLVASTQ 180

Query: 181 AISLIGKQGSLIKSIQEGTGASVRVLSGDEMPFYAGADERIVELQGESLKVLMALEGVIG 240
           AI+LIGKQGSLIKSIQE TGASVRVLSGDEMPFYAG DER+VELQGE+LKVL ALE V+G
Sbjct: 181 AINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELQGETLKVLKALEAVVG 240

Query: 241 HLRKFLVDRSVLPLFEKSFNATATQDRQTETWADKSSLLTASQSVISTEYPPSIKRESIF 300
           HLRKFLVD SVLPLFEKSFN  A+QDRQT+ WADKSSLL+ASQSVIS EYPPS KRES+F
Sbjct: 241 HLRKFLVDHSVLPLFEKSFNTPASQDRQTDAWADKSSLLSASQSVISNEYPPSSKRESLF 300

Query: 301 LERDTHLDSHIPSSGISLYGQHDRVLPSIRSSGVARSGVPFVTQVTQTMQIPLSYAEDII 360
            +R+THLDSHI SSGISLYG  DRVLP+IRSSGV RSGVP VTQVTQTMQIPLSYAEDII
Sbjct: 301 FDRETHLDSHISSSGISLYGP-DRVLPAIRSSGVGRSGVPIVTQVTQTMQIPLSYAEDII 360

Query: 361 GVGGANIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEPVP 420
           GVGGANIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEA+S PKEPV 
Sbjct: 361 GVGGANIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAISGPKEPVT 420

Query: 421 SSSYGRLDMAGLRSSYSQLAAPGSSSYSQLAATGSSYTSSSLSSQSYGGYGSSGLGGYNT 468
           SSSYGRLD  GLR           SSYSQL A+GSSYT SSLSSQSYGGYGSSGLGGY+T
Sbjct: 421 SSSYGRLDTTGLR-----------SSYSQLGASGSSYTPSSLSSQSYGGYGSSGLGGYST 470

[Close]

BLAST of Sed0027995 vs. ExPASy Swiss-Prot
Match: Q9SZH4 (RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 GN=PEP PE=1 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 2.6e-120
Identity = 250/443 (56.43%), Postives = 323/443 (72.91%), Query Frame = 0


Query: 49  PPSDSAAHAKWPGWPGDCVFRLIVPVVKVGSIIGRKGDIIRKLCEETRARIRVLDGAVGT 108
           P ++ +A  +WPGWPGDCVFR+IVPV KVG+IIGRKGD I+K+CEETRARI+VLDG V T
Sbjct: 57  PDTNDSAEERWPGWPGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNT 116

Query: 109 PDRVVLISGKEEQESALSPAMDAVIRVFKRVSGFSENEEE----AKASFCSIRLLAASTQ 168
           PDR+VLISGKEE E+ +SPAMDAV+RVF+RVSG  +N+++    A + F S+RLL ASTQ
Sbjct: 117 PDRIVLISGKEEPEAYMSPAMDAVLRVFRRVSGLPDNDDDDVQNAGSVFSSVRLLVASTQ 176

Query: 169 AISLIGKQGSLIKSIQEGTGASVRVLSGDEMPFYAGADERIVELQGESLKVLMALEGVIG 228
           AI+LIGKQGSLIKSI E +GASVR+LS +E PFYA  DERIV+LQGE+LK+L ALE ++G
Sbjct: 177 AINLIGKQGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVG 236

Query: 229 HLRKFLVDRSVLPLFEKSFNATATQDRQTETWAD-KSSLLTASQSVISTEYPPSIKRESI 288
           HLR+FLVD +V+PLFEK + A  +Q RQ E  A+ KSSL T S +++  ++    +RE +
Sbjct: 237 HLRRFLVDHTVVPLFEKQYLARVSQTRQEEPLAESKSSLHTISSNLMEPDFSLLARREPL 296

Query: 289 FLERDTHLDSHIPSSGISLYGQHDRVLPSIRSSGVARSGVPFVTQVTQTMQIPLSYAEDI 348
           FLERD+ +DS +  SG+S+Y Q D VL +  S G+AR    FVTQV+QTMQIP SYAEDI
Sbjct: 297 FLERDSRVDSRVQPSGVSIYSQ-DPVLSARHSPGLARVSSAFVTQVSQTMQIPFSYAEDI 356

Query: 349 IGVGGANIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEPV 408
           IGV GANIA+IRR SGA +TI+ES   PD+ITVEIKGT+SQVQ A+QLIQE +   KEPV
Sbjct: 357 IGVEGANIAYIRRRSGATITIKESPH-PDQITVEIKGTTSQVQTAEQLIQEFIINHKEPV 416

Query: 409 P-SSSYGRLDMAGLRSSYSQLA-----APGS-----------SSYSQLAATGSSYTSSSL 468
             S  Y R+D   + +   QL+      P +           ++YSQL   G S  + +L
Sbjct: 417 SVSGGYARIDSGYVPAYPPQLSNRQEPLPSTYMGTEPVQYRPTAYSQLG--GPSTYTPTL 476

[Close]

BLAST of Sed0027995 vs. ExPASy Swiss-Prot
Match: Q9SR13 (Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 5.3e-73
Identity = 181/448 (40.40%), Postives = 245/448 (54.69%), Query Frame = 0


Query: 39  PSNLEDYLSAPPSDSAA----HAKWPGWPGDCVFRLIVPVVKVGSIIGRKGDIIRKLCEE 98
           P +LE    + P + A       +WPGWPG+ VFR++VP  KVGSIIGRKGD+I+K+ EE
Sbjct: 156 PEHLESLQKSEPEEDATVGGEEKRWPGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIVEE 215

Query: 99  TRARIRVLDGAVGTPDRVVLISGKEEQESALSPAMDAVIRVFKR-VSGF-SENEEEAKAS 158
           TRARI++LDG  GT +R V++SGKEE ES+L P+MD ++RV  R V G   E  +    S
Sbjct: 216 TRARIKILDGPPGTTERAVMVSGKEEPESSLPPSMDGLLRVHMRIVDGLDGEASQAPPPS 275

Query: 159 FCSIRLLAASTQAISLIGKQGSLIKSIQEGTGASVRVLSGDEMPFYAGADERIVELQGES 218
             S RLL  ++QA SLIGKQG  +K+IQE +   VRVL  +++P +A  D+R+VE+ GE 
Sbjct: 276 KVSTRLLVPASQAGSLIGKQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEP 335

Query: 219 LKVLMALEGVIGHLRKFLVDRSVLPLFEKSFNATATQ----DRQTETWADKSSLLTASQS 278
             V  ALE +  HLRKFLVDRS++P FE        Q        ++W        +   
Sbjct: 336 TSVHRALELIASHLRKFLVDRSIIPFFENQMQKPTRQMDHMPPPHQSWGPPQGHAPSVGG 395

Query: 279 VISTEYPPSIKRESIFLERDTHLDSHI-------------PSSGISLYGQHDRVLPSIRS 338
                 PP       +++     DS+              P  GIS YG+   +   + S
Sbjct: 396 GGYGHNPPP------YMQPPPRHDSYYPPPEMRQPPMEKQPHQGISAYGREPPMNVHVSS 455

Query: 339 SGVARSGVPFVT-QVTQTMQIPLSYAEDIIGVGGANIAFIRRNSGAILTIQESRGLPDEI 398
           +       P V  QVTQ MQIPLSYA+ +IG  G+NI++ RR SGA +TIQE+RG+P E+
Sbjct: 456 A------PPMVAQQVTQQMQIPLSYADAVIGTSGSNISYTRRLSGATVTIQETRGVPGEM 515

Query: 399 TVEIKGTSSQVQMAQQLIQEAVSAPKEPVPSSSYGRLDMAGLRSSYSQLAAPGSSSYSQL 458
           TVE+ GT SQVQ A QLIQ  ++    P P+                Q  AP    Y+  
Sbjct: 516 TVEVSGTGSQVQTAVQLIQNFMAEAGAPAPAQ--------------PQTVAPEQQGYNPY 575

Query: 459 AATGSSYTSSSLSSQSYGGYGSSGLGGY 463
           A  GS Y ++  +    GGY +    GY
Sbjct: 576 ATHGSVYAAAPTNPP--GGYATDYSSGY 575

[Close]

BLAST of Sed0027995 vs. ExPASy Swiss-Prot
Match: F4KDN0 (KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.6e-16
Identity = 56/180 (31.11%), Postives = 97/180 (53.89%), Query Frame = 0


Query: 64  GDCVFRLIVPVVKVGSIIGRKGDIIRKLCEETRARIRVLDGAVGTPDRVVLI-------- 123
           G   FRL+ P+  VG++IG+ G++I++L + T A+IRV +   G+PDRV+ I        
Sbjct: 45  GHAAFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKS 104

Query: 124 -------------SGKEEQESALSPAMDAVIRVFKRVSGFSENEEEAKASFCSIRLLAAS 183
                          K+E+E  +S A  A+I+VF+ ++       EA +     RLL  S
Sbjct: 105 RVKLGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAA------EADSDTVVCRLLTES 164

Query: 184 TQAISLIGKQGSLIKSIQEGTGASVRVLSGDEMPFYAGADERIVELQGESLKVLMALEGV 223
           + A ++IGK G ++ SI++ TG  + +   + +P  A  D+ +VE++G ++ V  AL  +
Sbjct: 165 SHAGAVIGKGGQMVGSIRKETGCKISIRI-ENLPICADTDDEMVEVEGNAIAVKKALVSI 217

[Close]

BLAST of Sed0027995 vs. ExPASy Swiss-Prot
Match: P91277 (Heterogeneous nuclear ribonucleoprotein K homolog OS=Caenorhabditis elegans OX=6239 GN=hrpk-1 PE=1 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 2.7e-16
Identity = 96/354 (27.12%), Postives = 158/354 (44.63%), Query Frame = 0


Query: 69  RLIVPVVKVGSIIGRKGDIIRKLCEETRARIRVLDGAVGTPDRVVLISGKEEQESALSPA 128
           RL+V     G+IIG+ G+ I++L  E  A ++V D    TP+RV  ++   ++++ L+  
Sbjct: 53  RLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQVPDS--NTPERVCTVTA--DEKTVLNIL 112

Query: 129 MDAVIRVFKRVSGFSENEEEAKASFCSIRLLAASTQAISLIGKQGSLIKSIQEGTGASVR 188
            D + R+      FSE +       C +R+L   + A +LIG+ GS IK ++E   A ++
Sbjct: 113 KDVLPRL---EDNFSERDP------CEVRMLVHQSHAGALIGRNGSKIKELREKCSARLK 172

Query: 189 VLSGDEMPFYAGADERIVELQGESLKVLMALEGVIGHLRKFLVDRSVLPLFEKSFNATAT 248
           + +G       G+ +R++   GE   VL  +E V+  L++  +  S  P +  +FN   +
Sbjct: 173 IFTG----CAPGSTDRVLITSGEQKNVLGIIEEVMKELKEIPIKGSATP-YLPAFNYDPS 232

Query: 249 Q-------DRQTETWADKSSLLTASQSVISTEYPPSIKR---------------ESIFLE 308
                             ++   A Q     + PP   R               E+   +
Sbjct: 233 NISDYGGFPGNMPAGGPPNNRGPAPQR--GGQGPPGGPRSYGGAITQGGGQRSFEAGDFQ 292

Query: 309 RDTHLDSHIPSSGISLYG----QHDRVLPSIRSSGVARSGVPFVTQVTQTMQIPLSYAED 368
           +       +P   +S  G    Q     P+    G    G   VT  T  + IP      
Sbjct: 293 QFRGGPGPVPGYAMSAPGYPPQQGQFGAPNNAGYGYGPGGGGPVT--TAQVTIPSDLGGT 352

Query: 369 IIGVGGANIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAV 397
           IIG GG  IA IR+ SGA +T+++S G P+ I + IKGT  Q+  AQ L+Q+ V
Sbjct: 353 IIGRGGERIARIRQESGAQITLEQSNGQPERI-ITIKGTEQQIHSAQYLLQQCV 383

[Close]

BLAST of Sed0027995 vs. ExPASy Swiss-Prot
Match: P57721 (Poly(rC)-binding protein 3 OS=Homo sapiens OX=9606 GN=PCBP3 PE=1 SV=2)

HSP 1 Score: 84.3 bits (207), Expect = 3.9e-15
Identity = 94/341 (27.57%), Postives = 155/341 (45.45%), Query Frame = 0


Query: 69  RLIVPVVKVGSIIGRKGDIIRKLCEETRARIRVLDGAVGTPDRVVLISGKEEQESALSPA 128
           RL++   +VGSIIG+KG+ ++K+ EE+ ARI + +G    P+R+V I+G  +   A+  A
Sbjct: 49  RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTD---AIFKA 108

Query: 129 MDAVIRVFKR--VSGFSENEEEAKASFCSIRLLAASTQAISLIGKQGSLIKSIQEGTGAS 188
              +   F+   ++  S +   +K    ++RL+  ++Q  SLIGK GS IK I+E TGA 
Sbjct: 109 FAMIAYKFEEDIINSMSNSPATSKPP-VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQ 168

Query: 189 VRVLSGDEMPFYAGADERIVELQGESLKVLMALEGVI---------GHLRKFLVDRSVLP 248
           V+V +GD +P    + ER V + G    ++  ++ +          G    +    +  P
Sbjct: 169 VQV-AGDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTP 228

Query: 249 LFEKSFNATATQDRQTETWADKSSLLTASQSVISTEYPPSIKRESIFLERDTHLDSHIPS 308
           +      A   Q +      D+ + L    ++  T +PP  +    F      L  H   
Sbjct: 229 VIFAGGQAYTIQGQYAIPHPDQLTKL-HQLAMQQTPFPPLGQTNPAF--PGEKLPLHSSE 288

Query: 309 SGISLYGQHDRVLPSIRSSGVARSGVPFVTQVTQTMQIPLSYAEDIIGVGGANIAFIRRN 368
              +L GQ         SSG+  S        T  + IP      IIG  G  I  IR+ 
Sbjct: 289 EAQNLMGQ---------SSGLDAS----PPASTHELTIPNDLIGCIIGRQGTKINEIRQM 348

Query: 369 SGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSA 399
           SGA + I  +     E  + I GT + + +AQ LI   +++
Sbjct: 349 SGAQIKIANATEGSSERQITITGTPANISLAQYLINARLTS 363

[Close]

BLAST of Sed0027995 vs. ExPASy TrEMBL
Match: A0A5D3BVI2 (RNA-binding KH domain-containing protein PEPPER OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G001920 PE=4 SV=1)

HSP 1 Score: 716.8 bits (1849), Expect = 5.7e-203
Identity = 394/483 (81.57%), Postives = 417/483 (86.34%), Query Frame = 0


Query: 1   MATNTATENGST------EPSILASAIAPESAFTDAGGSEFDLDPSNLEDYLSAPPSDSA 60
           MATNT T+NGST      + S L S  A E+  T+ G  + D+DPSN +DY S PPSDSA
Sbjct: 1   MATNTTTDNGSTDAIANPQSSTLPSLAAAEADSTEVGDDDSDIDPSN-QDYSSLPPSDSA 60

Query: 61  AH----------AKWPGWPGDCVFRLIVPVVKVGSIIGRKGDIIRKLCEETRARIRVLDG 120
           AH           KWPGWPGDCVFRLIVPVVKVGSIIGRKGD+I+K+CEETRARIRVLDG
Sbjct: 61  AHEPSSHTGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDG 120

Query: 121 AVGTPDRVVLISGKEEQESALSPAMDAVIRVFKRVSGFSENEEEAKASFCSIRLLAASTQ 180
           AVGTPDRVVLISGKEE +S LSPAMDAVIRVFKRVSG SENE+EAKASF SIRLL ASTQ
Sbjct: 121 AVGTPDRVVLISGKEELDSPLSPAMDAVIRVFKRVSGLSENEDEAKASFSSIRLLVASTQ 180

Query: 181 AISLIGKQGSLIKSIQEGTGASVRVLSGDEMPFYAGADERIVELQGESLKVLMALEGVIG 240
           AI+LIGKQGSLIKSIQE TGASVRVLSGDEMPFYAGADER+VELQGESLKVL ALEGV+G
Sbjct: 181 AINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVG 240

Query: 241 HLRKFLVDRSVLPLFEKSFNATATQDRQTETWADKSSLLTASQSVISTEYPPSIKRESIF 300
           HLRKFLVD SVLPLFEKSFN  A+QDRQTETWADKSSLLTASQS+IS EYPPS KRES+F
Sbjct: 241 HLRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYPPSTKRESLF 300

Query: 301 LERDTHLDSHIPSSGISLYGQHDRVLPSIRSSGVARSGVPFVTQVTQTMQIPLSYAEDII 360
           L+R+THLDSHI SSGISLYGQ DRVLP+IRSSGV RSG P VTQVTQTMQIPLSYAEDII
Sbjct: 301 LDRETHLDSHISSSGISLYGQ-DRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDII 360

Query: 361 GVGGANIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEPVP 420
           GVGG NIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAV+APKEPV 
Sbjct: 361 GVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEPVT 420

Query: 421 SSSYGRLDMAGLRSSYSQLAAPGSSSYSQLAATGSSYTSSSLSSQSYGGYGSSGLGGYNT 468
           SSSYGRLD  GLR           SSYSQLAA+GSSYTSSSLSSQSYGGYGSSGLGGY T
Sbjct: 421 SSSYGRLDTTGLR-----------SSYSQLAASGSSYTSSSLSSQSYGGYGSSGLGGYTT 470

[Close]

BLAST of Sed0027995 vs. ExPASy TrEMBL
Match: A0A0A0LMH4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G061550 PE=4 SV=1)

HSP 1 Score: 714.5 bits (1843), Expect = 2.8e-202
Identity = 394/483 (81.57%), Postives = 414/483 (85.71%), Query Frame = 0


Query: 1   MATNTATENGSTE------PSILASAIAPESAFTDAGGSEFDLDPSNLEDYLSAPPSDSA 60
           MATNT TENGST+       S L S  A E   T+AG  + D DPSN +DY S PPSDSA
Sbjct: 1   MATNTTTENGSTDAIPNPLSSTLPSLAAAEPDSTEAGDDDSDSDPSN-QDYSSVPPSDSA 60

Query: 61  AH----------AKWPGWPGDCVFRLIVPVVKVGSIIGRKGDIIRKLCEETRARIRVLDG 120
           AH           KWPGWPGDCVFRLIVPVVKVGSIIGRKGD+I+K+CEETRARIRVLDG
Sbjct: 61  AHEPSNHTGPSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDG 120

Query: 121 AVGTPDRVVLISGKEEQESALSPAMDAVIRVFKRVSGFSENEEEAKASFCSIRLLAASTQ 180
           AVGTPDRVVLISGKEE ES LSPAMDAVIRVFKRVSG SENE+EAKASFCSIRLL ASTQ
Sbjct: 121 AVGTPDRVVLISGKEELESPLSPAMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQ 180

Query: 181 AISLIGKQGSLIKSIQEGTGASVRVLSGDEMPFYAGADERIVELQGESLKVLMALEGVIG 240
           AI+LIGKQGSLIKSIQE TGASVRVLSGDEMPFYAGADER+VELQGESLKVL ALEGV+G
Sbjct: 181 AINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVG 240

Query: 241 HLRKFLVDRSVLPLFEKSFNATATQDRQTETWADKSSLLTASQSVISTEYPPSIKRESIF 300
           HLRKFLVD SVLPLFEKSFN  A+QDRQTETWADKSSLLTASQS+IS EY PS KRES+F
Sbjct: 241 HLRKFLVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSIISAEYAPSTKRESLF 300

Query: 301 LERDTHLDSHIPSSGISLYGQHDRVLPSIRSSGVARSGVPFVTQVTQTMQIPLSYAEDII 360
           L+R+ H DSHI SSGISLYGQ DRVLP+IRSSGV RSG P VTQVTQTMQIPLSYAEDII
Sbjct: 301 LDREAHFDSHISSSGISLYGQ-DRVLPTIRSSGVGRSGGPIVTQVTQTMQIPLSYAEDII 360

Query: 361 GVGGANIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEPVP 420
           GVGG NIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAV+APKEPV 
Sbjct: 361 GVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVNAPKEPVT 420

Query: 421 SSSYGRLDMAGLRSSYSQLAAPGSSSYSQLAATGSSYTSSSLSSQSYGGYGSSGLGGYNT 468
           SSSYGRLD  GLR           SSYSQLAA+GSS+TSSSLSSQSYGGYGSSGLGGY T
Sbjct: 421 SSSYGRLDTTGLR-----------SSYSQLAASGSSFTSSSLSSQSYGGYGSSGLGGYTT 470

[Close]

BLAST of Sed0027995 vs. ExPASy TrEMBL
Match: A0A6J1FC72 (RNA-binding KH domain-containing protein PEPPER-like OS=Cucurbita moschata OX=3662 GN=LOC111444285 PE=4 SV=1)

HSP 1 Score: 710.3 bits (1832), Expect = 5.3e-201
Identity = 387/483 (80.12%), Postives = 416/483 (86.13%), Query Frame = 0


Query: 1   MATNTATENGSTEPSILASA------IAPESAFTDAGGSEFDLDPSNLEDYLSAPPSDSA 60
           MATNT TENGST+   L S+       APE   T+A G+E  +DPSN +DYLSAP SDS 
Sbjct: 1   MATNTTTENGSTDADALNSSAQLAFEAAPEPDSTEASGAESGIDPSN-QDYLSAPASDSL 60

Query: 61  AH----------AKWPGWPGDCVFRLIVPVVKVGSIIGRKGDIIRKLCEETRARIRVLDG 120
            H           KWPGWPGDCVFRLIVPVVKVGSIIGR+GD+I+K+CEETRARIRVLDG
Sbjct: 61  PHESPNHAGASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDG 120

Query: 121 AVGTPDRVVLISGKEEQESALSPAMDAVIRVFKRVSGFSENEEEAKASFCSIRLLAASTQ 180
           AVGTPDRVVLISGKEE E+  SPAMDAV+RVFKRVSGFSENE+EAKASFCS+RLL ASTQ
Sbjct: 121 AVGTPDRVVLISGKEEPEAPFSPAMDAVLRVFKRVSGFSENEDEAKASFCSVRLLVASTQ 180

Query: 181 AISLIGKQGSLIKSIQEGTGASVRVLSGDEMPFYAGADERIVELQGESLKVLMALEGVIG 240
           AI+LIGKQGSLIKSIQE TGASVRVLSGDEMPFYAG DER+VELQGE+LKVL ALE V+G
Sbjct: 181 AINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMVELQGETLKVLKALEAVVG 240

Query: 241 HLRKFLVDRSVLPLFEKSFNATATQDRQTETWADKSSLLTASQSVISTEYPPSIKRESIF 300
           HLRKFLVD SVLPLFEKSFN  A+QDRQT++WADKSSLL+ASQSVISTEYPPS KRES+F
Sbjct: 241 HLRKFLVDHSVLPLFEKSFNTPASQDRQTDSWADKSSLLSASQSVISTEYPPSSKRESLF 300

Query: 301 LERDTHLDSHIPSSGISLYGQHDRVLPSIRSSGVARSGVPFVTQVTQTMQIPLSYAEDII 360
           L+R+THLDSHI SSGISLYG  DRVLP+IRSSGV RSGVP VTQVTQTMQIPLSYAEDII
Sbjct: 301 LDRETHLDSHISSSGISLYGP-DRVLPAIRSSGVGRSGVPIVTQVTQTMQIPLSYAEDII 360

Query: 361 GVGGANIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEPVP 420
           GVGGANIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEA+S PKEPV 
Sbjct: 361 GVGGANIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAISGPKEPVT 420

Query: 421 SSSYGRLDMAGLRSSYSQLAAPGSSSYSQLAATGSSYTSSSLSSQSYGGYGSSGLGGYNT 468
           SSSYGRLD  GLR           SSYSQL A+GSSYT SSLSSQSYGGYGSSGLGGY+T
Sbjct: 421 SSSYGRLDTTGLR-----------SSYSQLGASGSSYTPSSLSSQSYGGYGSSGLGGYST 470

[Close]

BLAST of Sed0027995 vs. ExPASy TrEMBL
Match: A0A6J1D9V1 (RNA-binding KH domain-containing protein PEPPER OS=Momordica charantia OX=3673 GN=LOC111018213 PE=4 SV=1)

HSP 1 Score: 704.9 bits (1818), Expect = 2.2e-199
Identity = 392/486 (80.66%), Postives = 417/486 (85.80%), Query Frame = 0


Query: 1   MATNTATENGST---------EPSILASAIAPESAFTDAGGSEFDLDPSNLEDYLSAPPS 60
           MATN   ENGST         + S L S  A E   T+AGG+E DLDPSN  DYLS P S
Sbjct: 1   MATNKIAENGSTDASAINSNPQSSTLDSVAAAELDSTEAGGAESDLDPSN-SDYLSVPAS 60

Query: 61  DSAAH----------AKWPGWPGDCVFRLIVPVVKVGSIIGRKGDIIRKLCEETRARIRV 120
           DS A            KWPGWPGDCVFRLIVPVVKVGSIIGRKGD+I+K+CEET+ARIRV
Sbjct: 61  DSGAQEASNHTGSSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETKARIRV 120

Query: 121 LDGAVGTPDRVVLISGKEEQESALSPAMDAVIRVFKRVSGFSENEEEAKASFCSIRLLAA 180
           LDGAVGTPDRVVLISGKEE E+ LSPAMDAVIRVFKRVSGFSENE++ KASFCSIRLL A
Sbjct: 121 LDGAVGTPDRVVLISGKEEPEAPLSPAMDAVIRVFKRVSGFSENEDDTKASFCSIRLLVA 180

Query: 181 STQAISLIGKQGSLIKSIQEGTGASVRVLSGDEMPFYAGADERIVELQGESLKVLMALEG 240
           STQAI+LIGKQGSLIKSIQE TGASVRVLSGDEMPFYAGADER+VELQGESLKVL ALE 
Sbjct: 181 STQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEA 240

Query: 241 VIGHLRKFLVDRSVLPLFEKSFNATATQDRQTETWADKSSLLTASQSVISTEYPPSIKRE 300
           V+GHLRKFLVD SVLPLFEKSFN TA+QDRQT+TWADKSSL TASQSVISTEYPP+ KRE
Sbjct: 241 VVGHLRKFLVDHSVLPLFEKSFNTTASQDRQTDTWADKSSLHTASQSVISTEYPPATKRE 300

Query: 301 SIFLERDTHLDSHIPSSGISLYGQHDRVLPSIRSSGVARSGVPFVTQVTQTMQIPLSYAE 360
           S+F +R++HLDSH+ SSGISLYGQ DR+LP IRSSGVARSG P VTQVTQTMQIPLSYAE
Sbjct: 301 SLFHDRESHLDSHMASSGISLYGQ-DRILPGIRSSGVARSGAPIVTQVTQTMQIPLSYAE 360

Query: 361 DIIGVGGANIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKE 420
           DIIGVGG NIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVS PKE
Sbjct: 361 DIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSGPKE 420

Query: 421 PVPSSSYGRLDMAGLRSSYSQLAAPGSSSYSQLAATGSSYTSSSLSSQSYGGYGSSGLGG 468
           PV SSSYGRLD AGLRSSYSQLA  G SSY+      SS+TSSSLSSQSYGGYGSSGLGG
Sbjct: 421 PVTSSSYGRLD-AGLRSSYSQLAGSG-SSYT------SSFTSSSLSSQSYGGYGSSGLGG 476

[Close]

BLAST of Sed0027995 vs. ExPASy TrEMBL
Match: A0A6J1HR76 (RNA-binding KH domain-containing protein PEPPER-like OS=Cucurbita maxima OX=3661 GN=LOC111465395 PE=4 SV=1)

HSP 1 Score: 703.7 bits (1815), Expect = 5.0e-199
Identity = 384/483 (79.50%), Postives = 416/483 (86.13%), Query Frame = 0


Query: 1   MATNTATENGSTEPSILASA------IAPESAFTDAGGSEFDLDPSNLEDYLSAPPSDSA 60
           MATNT TENGST+   L S+       APE   T+AGG+E D+DPSN + YLSAP SDS 
Sbjct: 1   MATNTTTENGSTDADALNSSPQLAFEAAPEPDSTEAGGAESDIDPSN-QVYLSAPASDSV 60

Query: 61  AH----------AKWPGWPGDCVFRLIVPVVKVGSIIGRKGDIIRKLCEETRARIRVLDG 120
            H           KWPGWPGDCVFRLIVPVVKVGSIIGR+GD+I+K+CEETRARIRVLDG
Sbjct: 61  PHESPNHAVASDKKWPGWPGDCVFRLIVPVVKVGSIIGRRGDLIKKICEETRARIRVLDG 120

Query: 121 AVGTPDRVVLISGKEEQESALSPAMDAVIRVFKRVSGFSENEEEAKASFCSIRLLAASTQ 180
           AVGTPDRVVLISGKEE E+ LSPAMDAV+RVFKRVSGFSENE+EAKASFCS+RLL ASTQ
Sbjct: 121 AVGTPDRVVLISGKEEPEAPLSPAMDAVLRVFKRVSGFSENEDEAKASFCSVRLLVASTQ 180

Query: 181 AISLIGKQGSLIKSIQEGTGASVRVLSGDEMPFYAGADERIVELQGESLKVLMALEGVIG 240
           AI+LIGKQGSLIKSIQE TGASVRVLSGDEMPFYAG DER++ELQGE+LKVL ALE V+G
Sbjct: 181 AINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGPDERMLELQGETLKVLKALEAVVG 240

Query: 241 HLRKFLVDRSVLPLFEKSFNATATQDRQTETWADKSSLLTASQSVISTEYPPSIKRESIF 300
           HLRKFLVD SVLPLFEKSFN  A+QD QT+ WADKSSLL+AS+SVIS EYPPS KRES+F
Sbjct: 241 HLRKFLVDHSVLPLFEKSFNTPASQDCQTDAWADKSSLLSASRSVISNEYPPSSKRESLF 300

Query: 301 LERDTHLDSHIPSSGISLYGQHDRVLPSIRSSGVARSGVPFVTQVTQTMQIPLSYAEDII 360
           ++R+THLDSHI SSGISLYG  DRVLP+IRSSGV RSGVP VTQVTQTMQIPLSYAEDII
Sbjct: 301 IDRETHLDSHISSSGISLYGP-DRVLPAIRSSGVGRSGVPIVTQVTQTMQIPLSYAEDII 360

Query: 361 GVGGANIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEPVP 420
           GVGGANIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEA+S PKEPV 
Sbjct: 361 GVGGANIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAISGPKEPVT 420

Query: 421 SSSYGRLDMAGLRSSYSQLAAPGSSSYSQLAATGSSYTSSSLSSQSYGGYGSSGLGGYNT 468
           +SSYGRLD AGLR           SSYSQL A+GSSYTSSSLSSQSYGGY SSGLGGY+T
Sbjct: 421 TSSYGRLDTAGLR-----------SSYSQLGASGSSYTSSSLSSQSYGGYVSSGLGGYST 470

[Close]

BLAST of Sed0027995 vs. TAIR 10
Match: AT4G26000.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 433.7 bits (1114), Expect = 1.9e-121
Identity = 250/443 (56.43%), Postives = 323/443 (72.91%), Query Frame = 0


Query: 49  PPSDSAAHAKWPGWPGDCVFRLIVPVVKVGSIIGRKGDIIRKLCEETRARIRVLDGAVGT 108
           P ++ +A  +WPGWPGDCVFR+IVPV KVG+IIGRKGD I+K+CEETRARI+VLDG V T
Sbjct: 57  PDTNDSAEERWPGWPGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNT 116

Query: 109 PDRVVLISGKEEQESALSPAMDAVIRVFKRVSGFSENEEE----AKASFCSIRLLAASTQ 168
           PDR+VLISGKEE E+ +SPAMDAV+RVF+RVSG  +N+++    A + F S+RLL ASTQ
Sbjct: 117 PDRIVLISGKEEPEAYMSPAMDAVLRVFRRVSGLPDNDDDDVQNAGSVFSSVRLLVASTQ 176

Query: 169 AISLIGKQGSLIKSIQEGTGASVRVLSGDEMPFYAGADERIVELQGESLKVLMALEGVIG 228
           AI+LIGKQGSLIKSI E +GASVR+LS +E PFYA  DERIV+LQGE+LK+L ALE ++G
Sbjct: 177 AINLIGKQGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVG 236

Query: 229 HLRKFLVDRSVLPLFEKSFNATATQDRQTETWAD-KSSLLTASQSVISTEYPPSIKRESI 288
           HLR+FLVD +V+PLFEK + A  +Q RQ E  A+ KSSL T S +++  ++    +RE +
Sbjct: 237 HLRRFLVDHTVVPLFEKQYLARVSQTRQEEPLAESKSSLHTISSNLMEPDFSLLARREPL 296

Query: 289 FLERDTHLDSHIPSSGISLYGQHDRVLPSIRSSGVARSGVPFVTQVTQTMQIPLSYAEDI 348
           FLERD+ +DS +  SG+S+Y Q D VL +  S G+AR    FVTQV+QTMQIP SYAEDI
Sbjct: 297 FLERDSRVDSRVQPSGVSIYSQ-DPVLSARHSPGLARVSSAFVTQVSQTMQIPFSYAEDI 356

Query: 349 IGVGGANIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQEAVSAPKEPV 408
           IGV GANIA+IRR SGA +TI+ES   PD+ITVEIKGT+SQVQ A+QLIQE +   KEPV
Sbjct: 357 IGVEGANIAYIRRRSGATITIKESPH-PDQITVEIKGTTSQVQTAEQLIQEFIINHKEPV 416

Query: 409 P-SSSYGRLDMAGLRSSYSQLA-----APGS-----------SSYSQLAATGSSYTSSSL 468
             S  Y R+D   + +   QL+      P +           ++YSQL   G S  + +L
Sbjct: 417 SVSGGYARIDSGYVPAYPPQLSNRQEPLPSTYMGTEPVQYRPTAYSQLG--GPSTYTPTL 476

[Close]

BLAST of Sed0027995 vs. TAIR 10
Match: AT3G04610.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 276.6 bits (706), Expect = 3.8e-74
Identity = 181/448 (40.40%), Postives = 245/448 (54.69%), Query Frame = 0


Query: 39  PSNLEDYLSAPPSDSAA----HAKWPGWPGDCVFRLIVPVVKVGSIIGRKGDIIRKLCEE 98
           P +LE    + P + A       +WPGWPG+ VFR++VP  KVGSIIGRKGD+I+K+ EE
Sbjct: 156 PEHLESLQKSEPEEDATVGGEEKRWPGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIVEE 215

Query: 99  TRARIRVLDGAVGTPDRVVLISGKEEQESALSPAMDAVIRVFKR-VSGF-SENEEEAKAS 158
           TRARI++LDG  GT +R V++SGKEE ES+L P+MD ++RV  R V G   E  +    S
Sbjct: 216 TRARIKILDGPPGTTERAVMVSGKEEPESSLPPSMDGLLRVHMRIVDGLDGEASQAPPPS 275

Query: 159 FCSIRLLAASTQAISLIGKQGSLIKSIQEGTGASVRVLSGDEMPFYAGADERIVELQGES 218
             S RLL  ++QA SLIGKQG  +K+IQE +   VRVL  +++P +A  D+R+VE+ GE 
Sbjct: 276 KVSTRLLVPASQAGSLIGKQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEP 335

Query: 219 LKVLMALEGVIGHLRKFLVDRSVLPLFEKSFNATATQ----DRQTETWADKSSLLTASQS 278
             V  ALE +  HLRKFLVDRS++P FE        Q        ++W        +   
Sbjct: 336 TSVHRALELIASHLRKFLVDRSIIPFFENQMQKPTRQMDHMPPPHQSWGPPQGHAPSVGG 395

Query: 279 VISTEYPPSIKRESIFLERDTHLDSHI-------------PSSGISLYGQHDRVLPSIRS 338
                 PP       +++     DS+              P  GIS YG+   +   + S
Sbjct: 396 GGYGHNPPP------YMQPPPRHDSYYPPPEMRQPPMEKQPHQGISAYGREPPMNVHVSS 455

Query: 339 SGVARSGVPFVT-QVTQTMQIPLSYAEDIIGVGGANIAFIRRNSGAILTIQESRGLPDEI 398
           +       P V  QVTQ MQIPLSYA+ +IG  G+NI++ RR SGA +TIQE+RG+P E+
Sbjct: 456 A------PPMVAQQVTQQMQIPLSYADAVIGTSGSNISYTRRLSGATVTIQETRGVPGEM 515

Query: 399 TVEIKGTSSQVQMAQQLIQEAVSAPKEPVPSSSYGRLDMAGLRSSYSQLAAPGSSSYSQL 458
           TVE+ GT SQVQ A QLIQ  ++    P P+                Q  AP    Y+  
Sbjct: 516 TVEVSGTGSQVQTAVQLIQNFMAEAGAPAPAQ--------------PQTVAPEQQGYNPY 575

Query: 459 AATGSSYTSSSLSSQSYGGYGSSGLGGY 463
           A  GS Y ++  +    GGY +    GY
Sbjct: 576 ATHGSVYAAAPTNPP--GGYATDYSSGY 575

[Close]

BLAST of Sed0027995 vs. TAIR 10
Match: AT1G51580.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 96.7 bits (239), Expect = 5.4e-20
Identity = 93/344 (27.03%), Postives = 146/344 (42.44%), Query Frame = 0


Query: 65  DCVFRLIVPVVKVGSIIGRKGDIIRKLCEETRARIRVLDGAVGTPDRVVLISGKEEQESA 124
           +  FRL+ P  KVGS+IG+ G ++R L  E+ A I+V D    + +R+++IS +E  E  
Sbjct: 275 EVAFRLLCPADKVGSLIGKGGAVVRALQNESGASIKVSDPTHDSEERIIVISARENLERR 334

Query: 125 LSPAMDAVIRVFKRVSGFSENEEEAKASFCSIRLLAASTQAISLIGKQGSLIKSIQEGTG 184
            S A D V+RV  R+         A  +    RLL  S     L+GK G LI  ++  TG
Sbjct: 335 HSLAQDGVMRVHNRIVEIGFEPSAAVVA----RLLVHSPYIGRLLGKGGHLISEMRRATG 394

Query: 185 ASVRVLSGDEMPFYAGADERIVELQGESLKVLMALEGVIGHLRKFLVDRSV--------L 244
           AS+RV + D+   Y    + IV++ G    V  AL  ++  LR+ +    +         
Sbjct: 395 ASIRVFAKDQATKYESQHDEIVQVIGNLKTVQDALFQILCRLREAMFPGRLPFQGMGGPP 454

Query: 245 PLFEKSFNATATQ--DRQTETWADKSSLLTASQSVISTEYPPSIKRESIFLERDTHLDSH 304
           P F   +         RQ     D+               P   +      +R     S 
Sbjct: 455 PPFMGPYPEPPPPFGPRQYPASPDRYHSPVGPFHERHCHGPGFDRPPGPGFDRPPSPMSW 514

Query: 305 IPSSGISLYGQHDRVLPSIRSSGVA------RSGVPFVTQVTQTMQIPLSYAEDIIGVGG 364
            P  GI   G    ++P   + G A       S  P +T     + IP +Y   + G   
Sbjct: 515 TPQPGID--GHPGGMVPPDVNHGFALRNEPIGSENPVMTSANVEIVIPQAYLGHVYGENC 574

Query: 365 ANIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLI 393
           +N+ +I++ SGA + + + +    E  V + GTS Q   AQ L+
Sbjct: 575 SNLNYIKQVSGANVVVHDPKAGTTEGLVVVSGTSDQAHFAQSLL 612

[Close]

BLAST of Sed0027995 vs. TAIR 10
Match: AT5G64390.2 (RNA-binding KH domain-containing protein )

HSP 1 Score: 89.0 bits (219), Expect = 1.1e-17
Identity = 56/180 (31.11%), Postives = 97/180 (53.89%), Query Frame = 0


Query: 64  GDCVFRLIVPVVKVGSIIGRKGDIIRKLCEETRARIRVLDGAVGTPDRVVLI-------- 123
           G   FRL+ P+  VG++IG+ G++I++L + T A+IRV +   G+PDRV+ I        
Sbjct: 45  GHAAFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKS 104

Query: 124 -------------SGKEEQESALSPAMDAVIRVFKRVSGFSENEEEAKASFCSIRLLAAS 183
                          K+E+E  +S A  A+I+VF+ ++       EA +     RLL  S
Sbjct: 105 RVKLGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAA------EADSDTVVCRLLTES 164

Query: 184 TQAISLIGKQGSLIKSIQEGTGASVRVLSGDEMPFYAGADERIVELQGESLKVLMALEGV 223
           + A ++IGK G ++ SI++ TG  + +   + +P  A  D+ +VE++G ++ V  AL  +
Sbjct: 165 SHAGAVIGKGGQMVGSIRKETGCKISIRI-ENLPICADTDDEMVEVEGNAIAVKKALVSI 217

[Close]

BLAST of Sed0027995 vs. TAIR 10
Match: AT5G64390.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 89.0 bits (219), Expect = 1.1e-17
Identity = 56/180 (31.11%), Postives = 97/180 (53.89%), Query Frame = 0


Query: 64  GDCVFRLIVPVVKVGSIIGRKGDIIRKLCEETRARIRVLDGAVGTPDRVVLI-------- 123
           G   FRL+ P+  VG++IG+ G++I++L + T A+IRV +   G+PDRV+ I        
Sbjct: 45  GHAAFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKS 104

Query: 124 -------------SGKEEQESALSPAMDAVIRVFKRVSGFSENEEEAKASFCSIRLLAAS 183
                          K+E+E  +S A  A+I+VF+ ++       EA +     RLL  S
Sbjct: 105 RVKLGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAA------EADSDTVVCRLLTES 164

Query: 184 TQAISLIGKQGSLIKSIQEGTGASVRVLSGDEMPFYAGADERIVELQGESLKVLMALEGV 223
           + A ++IGK G ++ SI++ TG  + +   + +P  A  D+ +VE++G ++ V  AL  +
Sbjct: 165 SHAGAVIGKGGQMVGSIRKETGCKISIRI-ENLPICADTDDEMVEVEGNAIAVKKALVSI 217

The following BLAST results are available for this feature:

BLAST of Sed0027995 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890982.1	5.6e-205	81.89	RNA-binding KH domain-containing protein PEPPER-like [Benincasa hispida]	[more]
TYK03085.1	1.2e-202	81.57	RNA-binding KH domain-containing protein PEPPER [Cucumis melo var. makuwa]	[more]
XP_004149510.2	5.8e-202	81.57	RNA-binding KH domain-containing protein PEPPER isoform X1 [Cucumis sativus] >KG...	[more]
XP_022938096.1	1.1e-200	80.12	RNA-binding KH domain-containing protein PEPPER-like [Cucurbita moschata]	[more]
XP_023538336.1	4.6e-199	79.30	RNA-binding KH domain-containing protein PEPPER-like [Cucurbita pepo subsp. pepo...	[more]

BLAST of Sed0027995 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZH4	2.6e-120	56.43	RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SR13	5.3e-73	40.40	Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV...	[more]
F4KDN0	1.6e-16	31.11	KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 S...	[more]
P91277	2.7e-16	27.12	Heterogeneous nuclear ribonucleoprotein K homolog OS=Caenorhabditis elegans OX=6...	[more]
P57721	3.9e-15	27.57	Poly(rC)-binding protein 3 OS=Homo sapiens OX=9606 GN=PCBP3 PE=1 SV=2	[more]

BLAST of Sed0027995 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BVI2	5.7e-203	81.57	RNA-binding KH domain-containing protein PEPPER OS=Cucumis melo var. makuwa OX=1...	[more]
A0A0A0LMH4	2.8e-202	81.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G061550 PE=4 SV=1	[more]
A0A6J1FC72	5.3e-201	80.12	RNA-binding KH domain-containing protein PEPPER-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1D9V1	2.2e-199	80.66	RNA-binding KH domain-containing protein PEPPER OS=Momordica charantia OX=3673 G...	[more]
A0A6J1HR76	5.0e-199	79.50	RNA-binding KH domain-containing protein PEPPER-like OS=Cucurbita maxima OX=3661...	[more]

BLAST of Sed0027995 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G26000.1	1.9e-121	56.43	RNA-binding KH domain-containing protein	[more]
AT3G04610.1	3.8e-74	40.40	RNA-binding KH domain-containing protein	[more]
AT1G51580.1	5.4e-20	27.03	RNA-binding KH domain-containing protein	[more]
AT5G64390.2	1.1e-17	31.11	RNA-binding KH domain-containing protein	[more]
AT5G64390.1	1.1e-17	31.11	RNA-binding KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 327..397 e-value: 2.6E-11 score: 53.6 coord: 64..137 e-value: 1.2E-9 score: 48.0 coord: 152..227 e-value: 1.4E-7 score: 41.2
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 158..220 e-value: 7.2E-9 score: 35.3 coord: 330..394 e-value: 7.7E-12 score: 44.9 coord: 68..121 e-value: 4.6E-12 score: 45.6
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 322..398 e-value: 1.3E-14 score: 55.6
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 323..397
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 59..141
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 149..234
None	No IPR available	GENE3D	3.30.310.210		coord: 65..229 e-value: 6.7E-30 score: 105.9
None	No IPR available	PANTHER	PTHR10288:SF277	RNA-BINDING KH DOMAIN-CONTAINING PROTEIN PEPPER	coord: 53..434
None	No IPR available	PANTHER	PTHR10288	KH DOMAIN CONTAINING RNA BINDING PROTEIN	coord: 53..434
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 153..222 score: 12.160326
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 65..132 score: 14.67591
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 328..392 score: 14.424352
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 155..220 e-value: 3.08523E-14 score: 65.1903
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 67..136 e-value: 6.59913E-19 score: 78.6723
None	No IPR available	CDD	cd00105	KH-I	coord: 330..393 e-value: 6.00621E-12 score: 58.7255

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0027995.1	Sed0027995.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048467	gynoecium development
biological_process	GO:0009299	mRNA transcription
biological_process	GO:0048579	negative regulation of long-day photoperiodism, flowering
biological_process	GO:0048577	negative regulation of short-day photoperiodism, flowering
biological_process	GO:0010468	regulation of gene expression
biological_process	GO:0006396	RNA processing
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding