Sed0027984 (gene) Chayote v1

Overview


Name	Sed0027984
Type	gene
Organism	Sechium edule (Chayote v1)
Description	rRNA-processing protein EFG1
Location	LG02: 49939375 .. 49944419 (+)
RNA-Seq Expression	Sed0027984
Synteny	Sed0027984

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAGAAAAGAGCATTTTTATTTATTTCACTTCATCAAAGAAATAAATAAATAAAAATTGCCAAAAAAAAAAAGAAAAGTAATTTTGAAAATGAAGAAGAATTAGGTTTTTTGTGAAGGAAAGAAATTAAGAAGATCGTGTGGAAAATTAAAAAAAGAAAAAGAAAACAAAAATGTTGGGAGACCGAAACAAAACCTCTCTGGTGTGGTGAATTTGGCGGTGTGGTGCTGAGAGTGTGTAAAGAACCTTGTCCCTTCTCTCCGATCTGCGTGGCTACGGCAGGGAAACCATGGCCCACGGCGGCTACGGCAACCGCAGGGTGAACCCGCCGCCGCGCCGATCCAAGGCCTTGGCGGTCGACAAGAAGAAGCCCAAGTCCGTCTCCCTCAAGAACCAGATTCGATCCGCTGAGCGCATGCTTCTTCGCAAGGTTTTCTTCGATTCTTAACTTCTTCATCTTTCAACTCTCTTCTAGATCGTTTTAGGGCTTGAGGTTTGTTTAGCTGATTTAGGGCGGTTGGACAACTAACTAGTTCCTTGATGGTTTTTCTCTTCGGAGCTACTACGGTTTGGTAACACTTGATTCTGAGGCGTCTTGTTTCTGTGTGTGGAACTAGATTCCTTGCAATCTATGGAGTTCAATATCGGAATGCTTTTTAGCTATCATGGTGGCCGCCACATAGCTAAGAATTAATTTTCTATGGTTTCTTTGACACTCCAGTATTGTACACTAGAGTTGGGTGTTTGTCTCGTGATAATAGTCGATATGTGCGCCAGCTAGTCTGAACAATCGTTGATATATAAAAAAATATGGAAATTCTCGCTTAAGATAAGCGTGCACTTATTATGAAGTCACTCAAATATGGAGGCGCAGAACGTGCTGCAAGATTTTGTGTAGCTAATAAGTTCTAAAGTGAAAACAATCATGGAGTGACCTAGTGGTTATGAGGGATTTGGGGAATTAGGAGGTGAAGAATTCAATTCAAGGTGGTATCTAGCTAGGAATTAATTTCCTACGGGTTTCCTTGGCATTTAAATGTTGTAAAGTCAAGTTGTATGTCTGTGATAGTAGTTGAGGTACGTGCAAGCTGACCTGGACAGTAAGGATATAAAAAAAGAAAAAGAAAAAGAAGAGCTAAATCTAGGTTTTGGTTTTATTTTCTGTGTTAGAGGTTTTTCAAGAGGTTGCTAAGTGTTTATCGAGTTTAATGTAATACCCTGTAGTTTATGGGGTGTGGTTGCTGCTCATTTTTACTCTATGGCACTGTTGTGCATTATTATTACTTTTCATTGACCGTTTTTCCCCTCCAGAATTTACCTGCTGAAATTAGGGAGGCTCAAGAAAAGAAGTTGGAAGGACTCAAAAAACAGCAAGAAATTCATTCTCGTCTGGCCGTAGAGCGCAAAATATTCTTGCGGGACAGGAAGATTAAATTTTTTGGTAATAGTTTTTCTGTCATTTGATGGGGTTTGTATTTCATGCAAGTGTCAATTTTTGTTGATTGTTCATTTTCTTTTAAAACTTTGTCCTTGGTTCAGAGAGGAGAAAAATTGAAAGAAGACTTAGACGGCTTGAAAAACTGCAACGTGCACCATCTGGCCAGTTGCAAGATTCAGATGTTGCAGATCAATTATCCAAGTTGAAAGAGGATCTTGAATATGTCAGGGTATGTCATAAAGCTTTTTTCCTAAAATTTGCATATATGTACATATGCATGTGTGTATGCATACTATGTATGGATGCCTGTAATTATGCACGTGTTTAATGGTTAGTAGAGATACAGGAGTTCATCTAACTTTTCTTGTAGCTATGTCATAGTCTTCACGATCATTGCGTTCTAACTTCTAAAATGGCATCGTTGCATATATTTAATATTTTTCATTTTTCTAATGCTATAAATATTCTCAGACAATCCCAAATTCTTAATTTGTTGATTGACTTGTCTTTTACAAATTTTTTCCCATTATTGATTGTCTTTCACACTTTAGAGGAGGTAGAATTTGTACATTTAGCTCTGTTTGGCCATGTGCTTTGTTCTTTCCCTCTTTCCCCCTCGGATAAAGGATCAACAACAGTTGTAATGCAATAATTAATATAATATCCGGTCTTTCATTATCACTCTATAATTGCAGATGTGAAAGCTTTTCATTTGAATGCAGTTCTTTCCCAAAACAGAAAAATATGTAGCTTTATTTACCGGAGGCGATGAATCAGACATGGTTGATAAGAGAAATAAGTTGCGCAAGCAGATTAAAGCCAATCTGATAGCTGCTGCAGCCAGTGGGAAGGATTTAGAAGGTGGTTCCTTTACCATATCTTCAATTGGTTTTTTTCAAAATTTTGTTATTATATTTTTCTGCCAAGTAATTAGTTTCCTTTATAGAATATAGGTTTATGGGCGAACTTCCACATGCGCATTATGTGTTCTTAGAAATATCCGACCAAGTGGCTAACCATTGTTCTATGGCATCCATTTACAATTTTAAAGTTAGATTTATTTAGGAAAATGCTTGAATATAGTGTTTATTGAAACCGTTGGCTTGACAGATGCACTAGAACTTCATCAACAAATGGAAGCCTTGTGAGAATTCTTTTATTTAGTTTTAGTGACTACTATGTTTACTCTCAACATTTATGAGTTGTAGTTTGTATATTACTTTAGCCACTTGAACATTTTGTAATCCCGATTGGTTTAGGGCTTGCTTTCCTCCATTTTTGTAAACTTGAGCATTTATTAATTTTCATCTTTAATTTTCACTCATTCAATGAAAACTTGTTTCCTTTCTATATATATATATATATATATATATATGGCCCAATCTTTCGTATTTGGTGTTTATATTTTCTATAAAAATTGTTTTGTTAGAAAAAATTGTTCTGTTAAGATTATATAAGTATTTTTAATGATGTGGAATTGTCTCAAACAGAGACCGGTAGTGAGGATGACGGGTTACTAGACATGAGTGAGGATGATTTCTTCGTATCTGGTAGCTCAAGTGATGAAGCAGATGCAGATGATGAATGTACAGATAAAAGTTCAAGGTATGGAGAGCTTTTGGGGTTTCTTTCTATTTTTGTTTGATCATCTTCTTGGAAGTATTTGGGTATATTGAAGGTTTATTCTATGCTTTGGCAGGGAACAGGCTTCCAGTGCTTCTGGCAAAGCTGCATCAGGCATGTCTAGTGATGAAAAAAATCATCAGGTTTAGTTATGATTGCTGTTAATTTCTAATAGGATGTAATCTTTGTAGCTTATGTCCCAACATCCTTTTTTCCATCTCTCTTATTTGGCTAGCGTTTCATGTAGAGACAGATCTCTGCCAGAGCCTTAATGCCACCTCCTCGTCCAACCAAATCGTTTTCAAGTTCAGCTCAAGCTCGGTCAAAACCAGGATCTTCCTTGAGAAAATTTTCAACAAATCACAGGGCTGAGGGTTCTACATCCAACAACAGATCAAGTAGCAGAAGTGGATCTTCTTTTAGAGCTAGGGGGTCCTCAAACTCGCATACAAGTCACAGCAGTAACATAAGTTCCAATTCTGATGCTCACAAACCCCGAAGAAAGAGGAGGCCAAAAAAGAAAAAGCCACAGGTACGCGTTAAATTATAAATTTAGTTAAAATTTAGTCCCTATACTTCTAAAAATAGAATTTACTCGTCCGTGAATCATAAAAAAGTCCTTATGAACACCTCATCCTATTACTATCTAACCATCTAACTTGAATCCAACTATACCAACCCATTTTTTTTAATTATCCCGAACAATTAGTTTTCACATCATCGACAAATGGATGATCATCGGCCAAATATGCAACTCACATGGACTCTAGTTTTTGTATCATCAAACAATAGGGGGAAGGTAATAAACTCTACTTAAAATGTTTAATTCAAGCGATTTTAAGTTTGTATACTTGTGTATTTTTGAAACATGGGTAACCACGTCCGTCCCTAGGCCAGGCACCGGAGACATCGAAGGAGTAATATCATAGGTGAGTCTCAAACCTGGGACTTTGAGGAAGCATACCCTCAAAGCCTAAGGCTTCAACCTCTGTGCCAACCCTTGGGGACAGTTTGTATACTTGTGTTAGGATACCACCAATAAGAATTATGAACTTGGAATCAGATATCCTAACTTAATACCTAAAACTTTGATCTTTTATTAACCTATTAATACTAATGTACCTTTTAACTAACCACTATGCGATCACCAACTGGCCTTACCAAGGTCAAGGAGGGTCTTGGAAATCTAAGAGGTTATGGATTCAATCGATAGTGACCGCATATCTAGGGAACAATTTTGTATGGGTTTCCATGACATCTATAGTAGGTTCATCGTGAGAATAGTTAGTCATGATACTCGTAAGCTGGTTTGGACATTCACACATACGTATATATTCCCTTCAACTACTACCTTACAACTTGAGTTAATGAATGCGGGACAACGAGTAATTGCATGCTTCTTGGTCTCAATTCCATTCTCAGTTTTCTTTTGGCTTTTAAGCCCTCTCGTACACATAAATGATTGATTTCCGTTGTGATTGTTGGGGAAGTAATTTCTACTTGTTGGCCAAACCCCCTTTTTCAGGCATGATAGATTGGCCTCGGCTCCCTGTAACCTTCACTTCAACTGCACAGCTTGAAGCCTGAACCTGACTCGTAAAGCGGTTTCTGAAATTTTTAGCCAACCATGACTGTATGTATTCTGCTCTCGACCATTTTGGAGGTTTGCTGCATTGTATACTACTAGGTGGGTTTGAGAAATCATTTGCTTTAGTTCTGAAATGGATATGTGGTCTTTTATTATGGTTTTTGTTTTCTTTCATCATCAGGTTTTGGGTTATTTCTTTCTTTTCTATACTGTTGAAACTTGTAATGTGACTTGAATCTTATAGCCTATCATGCTTCTGGCTTGGCCTTTGTCAAAAATTATTATTATTTGTTCTCCATGCGATGGCAATTCGGAAATGCTGTATTTGCTTTCTTCCTATGATCCCAACGGCTGAGTCGATAATCTTCTTTAATAACTCTTAACTCTTCACAGAC

mRNA sequence

AAAAAGAAAAGAGCATTTTTATTTATTTCACTTCATCAAAGAAATAAATAAATAAAAATTGCCAAAAAAAAAAAGAAAAGTAATTTTGAAAATGAAGAAGAATTAGGTTTTTTGTGAAGGAAAGAAATTAAGAAGATCGTGTGGAAAATTAAAAAAAGAAAAAGAAAACAAAAATGTTGGGAGACCGAAACAAAACCTCTCTGGTGTGGTGAATTTGGCGGTGTGGTGCTGAGAGTGTGTAAAGAACCTTGTCCCTTCTCTCCGATCTGCGTGGCTACGGCAGGGAAACCATGGCCCACGGCGGCTACGGCAACCGCAGGGTGAACCCGCCGCCGCGCCGATCCAAGGCCTTGGCGGTCGACAAGAAGAAGCCCAAGTCCGTCTCCCTCAAGAACCAGATTCGATCCGCTGAGCGCATGCTTCTTCGCAAGAATTTACCTGCTGAAATTAGGGAGGCTCAAGAAAAGAAGTTGGAAGGACTCAAAAAACAGCAAGAAATTCATTCTCGTCTGGCCGTAGAGCGCAAAATATTCTTGCGGGACAGGAAGATTAAATTTTTTGAGAGGAGAAAAATTGAAAGAAGACTTAGACGGCTTGAAAAACTGCAACGTGCACCATCTGGCCAGTTGCAAGATTCAGATGTTGCAGATCAATTATCCAAGTTGAAAGAGGATCTTGAATATGTCAGGTTCTTTCCCAAAACAGAAAAATATGTAGCTTTATTTACCGGAGGCGATGAATCAGACATGGTTGATAAGAGAAATAAGTTGCGCAAGCAGATTAAAGCCAATCTGATAGCTGCTGCAGCCAGTGGGAAGGATTTAGAAGAGACCGGTAGTGAGGATGACGGGTTACTAGACATGAGTGAGGATGATTTCTTCGTATCTGGTAGCTCAAGTGATGAAGCAGATGCAGATGATGAATGTACAGATAAAAGTTCAAGGGAACAGGCTTCCAGTGCTTCTGGCAAAGCTGCATCAGGCATGTCTAGTGATGAAAAAAATCATCAGATCTCTGCCAGAGCCTTAATGCCACCTCCTCGTCCAACCAAATCGTTTTCAAGTTCAGCTCAAGCTCGGTCAAAACCAGGATCTTCCTTGAGAAAATTTTCAACAAATCACAGGGCTGAGGGTTCTACATCCAACAACAGATCAAGTAGCAGAAGTGGATCTTCTTTTAGAGCTAGGGGGTCCTCAAACTCGCATACAAGTCACAGCAGTAACATAAGTTCCAATTCTGATGCTCACAAACCCCGAAGAAAGAGGAGGCCAAAAAAGAAAAAGCCACAGGCATGATAGATTGGCCTCGGCTCCCTGTAACCTTCACTTCAACTGCACAGCTTGAAGCCTGAACCTGACTCGTAAAGCGGTTTCTGAAATTTTTAGCCAACCATGACTGTATGTATTCTGCTCTCGACCATTTTGGAGGTTTGCTGCATTGTATACTACTAGGTGGGTTTGAGAAATCATTTGCTTTAGTTCTGAAATGGATATGTGGTCTTTTATTATGGTTTTTGTTTTCTTTCATCATCAGGTTTTGGGTTATTTCTTTCTTTTCTATACTGTTGAAACTTGTAATGTGACTTGAATCTTATAGCCTATCATGCTTCTGGCTTGGCCTTTGTCAAAAATTATTATTATTTGTTCTCCATGCGATGGCAATTCGGAAATGCTGTATTTGCTTTCTTCCTATGATCCCAACGGCTGAGTCGATAATCTTCTTTAATAACTCTTAACTCTTCACAGAC

Coding sequence (CDS)

ATGGCCCACGGCGGCTACGGCAACCGCAGGGTGAACCCGCCGCCGCGCCGATCCAAGGCCTTGGCGGTCGACAAGAAGAAGCCCAAGTCCGTCTCCCTCAAGAACCAGATTCGATCCGCTGAGCGCATGCTTCTTCGCAAGAATTTACCTGCTGAAATTAGGGAGGCTCAAGAAAAGAAGTTGGAAGGACTCAAAAAACAGCAAGAAATTCATTCTCGTCTGGCCGTAGAGCGCAAAATATTCTTGCGGGACAGGAAGATTAAATTTTTTGAGAGGAGAAAAATTGAAAGAAGACTTAGACGGCTTGAAAAACTGCAACGTGCACCATCTGGCCAGTTGCAAGATTCAGATGTTGCAGATCAATTATCCAAGTTGAAAGAGGATCTTGAATATGTCAGGTTCTTTCCCAAAACAGAAAAATATGTAGCTTTATTTACCGGAGGCGATGAATCAGACATGGTTGATAAGAGAAATAAGTTGCGCAAGCAGATTAAAGCCAATCTGATAGCTGCTGCAGCCAGTGGGAAGGATTTAGAAGAGACCGGTAGTGAGGATGACGGGTTACTAGACATGAGTGAGGATGATTTCTTCGTATCTGGTAGCTCAAGTGATGAAGCAGATGCAGATGATGAATGTACAGATAAAAGTTCAAGGGAACAGGCTTCCAGTGCTTCTGGCAAAGCTGCATCAGGCATGTCTAGTGATGAAAAAAATCATCAGATCTCTGCCAGAGCCTTAATGCCACCTCCTCGTCCAACCAAATCGTTTTCAAGTTCAGCTCAAGCTCGGTCAAAACCAGGATCTTCCTTGAGAAAATTTTCAACAAATCACAGGGCTGAGGGTTCTACATCCAACAACAGATCAAGTAGCAGAAGTGGATCTTCTTTTAGAGCTAGGGGGTCCTCAAACTCGCATACAAGTCACAGCAGTAACATAAGTTCCAATTCTGATGCTCACAAACCCCGAAGAAAGAGGAGGCCAAAAAAGAAAAAGCCACAGGCATGA

Protein sequence

MAHGGYGNRRVNPPPRRSKALAVDKKKPKSVSLKNQIRSAERMLLRKNLPAEIREAQEKKLEGLKKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRLRRLEKLQRAPSGQLQDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGGDESDMVDKRNKLRKQIKANLIAAAASGKDLEETGSEDDGLLDMSEDDFFVSGSSSDEADADDECTDKSSREQASSASGKAASGMSSDEKNHQISARALMPPPRPTKSFSSSAQARSKPGSSLRKFSTNHRAEGSTSNNRSSSRSGSSFRARGSSNSHTSHSSNISSNSDAHKPRRKRRPKKKKPQA

Homology

[Close]

BLAST of Sed0027984 vs. NCBI nr
Match: XP_038877105.1 (rRNA-processing protein efg1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 523.5 bits (1347), Expect = 1.4e-144
Identity = 303/333 (90.99%), Postives = 315/333 (94.59%), Query Frame = 0


Query: 1   MAHGGYGNRRVNPPPRRSKALAVDKKKPKSVSLKNQIRSAERMLLRKNLPAEIREAQEKK 60
           MAHGGYG RRVNPP RRSK LAV+ KKPKSVSLKNQIRSAERM LRKNLPAE+REAQEKK
Sbjct: 87  MAHGGYGKRRVNPPARRSKGLAVE-KKPKSVSLKNQIRSAERM-LRKNLPAEVREAQEKK 146

Query: 61  LEGLKKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRLRRLEKLQRAPSGQLQDSDVAD 120
           LEGL+KQQEIHSRLAVERKIFLRDRKIKFFERRKIERR+RRLEKLQRAPSGQLQDSDVAD
Sbjct: 147 LEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQLQDSDVAD 206

Query: 121 QLSKLKEDLEYVRFFPKTEKYVALFTGGDESDMVDKRNKLRKQIKANLIAAAASGKDLEE 180
           QLSKLKEDLEYVRFFPKTEKYVALFTGGD+SDMVD+RNKLR+QIKANLIAAAASGKDLEE
Sbjct: 207 QLSKLKEDLEYVRFFPKTEKYVALFTGGDDSDMVDRRNKLREQIKANLIAAAASGKDLEE 266

Query: 181 TGSEDDGLLDMSEDDFFVSGSSSDEADADDECTDKSSREQASSASGKAASGMSSDEKNHQ 240
           TGSEDDGLLDMSEDDFF+ GSSSDEADADDE TDKS+REQASS SGKAASGMSSDE+NHQ
Sbjct: 267 TGSEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDERNHQ 326

Query: 241 ISARALMPPPRPTKSFSSSAQARSKPGSSLRKFSTNHRAEGSTSNNRSSSRSGSSFRARG 300
           ISAR LMPPPRPTKSFSSSAQARSK GSSLRK STNHRAE STS+N S SRSGSSF+ RG
Sbjct: 327 ISARVLMPPPRPTKSFSSSAQARSKAGSSLRKSSTNHRAEFSTSSNTSGSRSGSSFKVRG 386

Query: 301 SSNSHTSHSSNISSNSDAHKPRRKRRPKKKKPQ 334
           SSNSHT  SSNISSNSDAHKPRRKRRPKKKK Q
Sbjct: 387 SSNSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ 417

[Close]

BLAST of Sed0027984 vs. NCBI nr
Match: XP_022946524.1 (rRNA-processing protein EFG1 isoform X4 [Cucurbita moschata])

HSP 1 Score: 523.5 bits (1347), Expect = 1.4e-144
Identity = 303/334 (90.72%), Postives = 316/334 (94.61%), Query Frame = 0


Query: 1   MAHGGYGNRRVNPPPRRSKALAVDKKKPKSVSLKNQIRSAERMLLRKNLPAEIREAQEKK 60
           MAHGGYG RRVNP  RRSKALAV+ KKPKSVSLKNQIRSAERM LRKNLPAE+RE QEKK
Sbjct: 1   MAHGGYGKRRVNPAARRSKALAVE-KKPKSVSLKNQIRSAERM-LRKNLPAEVREVQEKK 60

Query: 61  LEGLKKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRLRRLEKLQRAPSGQLQDSDVAD 120
           LEGL+KQQEIHSRLAVERKIFLRDRKIKFFERRKIERR+RRLEKLQRAPSGQ QDSD+AD
Sbjct: 61  LEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQSQDSDIAD 120

Query: 121 QLSKLKEDLEYVRFFPKTEKYVALFTGGDESDMVDKRNKLRKQIKANLIAAAASGKDLEE 180
           QLSKLKEDLEYVRFFPKTEKY+ALFTG D+SD VD+RNKLRKQIKANLIAAAASGKDLEE
Sbjct: 121 QLSKLKEDLEYVRFFPKTEKYLALFTGSDDSDTVDRRNKLRKQIKANLIAAAASGKDLEE 180

Query: 181 TGSEDDGLLDMSEDDFFVSGSSSDEADADDECTDKSSREQASSASGKAASGMSSDEKNHQ 240
           TGSEDDGLLDMSEDDFFVSGSSSDEADADDE TDKS+RE ASS SGKAASGMSSDE+NHQ
Sbjct: 181 TGSEDDGLLDMSEDDFFVSGSSSDEADADDEWTDKSAREHASSTSGKAASGMSSDERNHQ 240

Query: 241 ISARALMPPPRPTKSFSSSAQARSKPGSSLRKFSTNHRAEGSTSNNRSSSRSGSSFRARG 300
           ISARALMPPPRPTKSF SSAQARSKPGSSLRKFSTN RAE S+S+N SSSRSGSSF+ARG
Sbjct: 241 ISARALMPPPRPTKSFPSSAQARSKPGSSLRKFSTNRRAEVSSSSNTSSSRSGSSFKARG 300

Query: 301 SSNSHTSHSSNISSNSDAHKPRRKRRPKKKKPQA 335
           SSNSHT HSSNISSNSDAHKPRRKRRPKKKK QA
Sbjct: 301 SSNSHTGHSSNISSNSDAHKPRRKRRPKKKKQQA 332

[Close]

BLAST of Sed0027984 vs. NCBI nr
Match: XP_022974419.1 (rRNA-processing protein EFG1 isoform X4 [Cucurbita maxima])

HSP 1 Score: 518.8 bits (1335), Expect = 3.4e-143
Identity = 301/334 (90.12%), Postives = 314/334 (94.01%), Query Frame = 0


Query: 1   MAHGGYGNRRVNPPPRRSKALAVDKKKPKSVSLKNQIRSAERMLLRKNLPAEIREAQEKK 60
           MAHGGYG RRVNP  RRSKALAV+ KKPKSVSLKNQIRSAERM LRKNLPAE+RE QEKK
Sbjct: 1   MAHGGYGKRRVNPAARRSKALAVE-KKPKSVSLKNQIRSAERM-LRKNLPAEVREVQEKK 60

Query: 61  LEGLKKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRLRRLEKLQRAPSGQLQDSDVAD 120
           LEGL+KQQEIHSRLAVERKIFLRDRKIKFFERRKIERR+RRLEKLQRAPSGQ QDSD+AD
Sbjct: 61  LEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQSQDSDIAD 120

Query: 121 QLSKLKEDLEYVRFFPKTEKYVALFTGGDESDMVDKRNKLRKQIKANLIAAAASGKDLEE 180
           QLSKLKEDLEYVRFFPKTEKY+ALFTG D+SD VD+RNKLRKQIKANLIAAAASGKDLEE
Sbjct: 121 QLSKLKEDLEYVRFFPKTEKYLALFTGSDDSDTVDRRNKLRKQIKANLIAAAASGKDLEE 180

Query: 181 TGSEDDGLLDMSEDDFFVSGSSSDEADADDECTDKSSREQASSASGKAASGMSSDEKNHQ 240
           TGSEDDGLLDMSEDDFFVSGSSSDEADADDE TDKS+RE ASS SGKAASGMSSDE+NHQ
Sbjct: 181 TGSEDDGLLDMSEDDFFVSGSSSDEADADDEWTDKSAREHASSTSGKAASGMSSDERNHQ 240

Query: 241 ISARALMPPPRPTKSFSSSAQARSKPGSSLRKFSTNHRAEGSTSNNRSSSRSGSSFRARG 300
           ISARALMPPPRPTKSF SSAQARSKPGSSLRKFSTN RAE S+S+N SSSRSGSSF+ RG
Sbjct: 241 ISARALMPPPRPTKSFPSSAQARSKPGSSLRKFSTNRRAEVSSSSNTSSSRSGSSFKVRG 300

Query: 301 SSNSHTSHSSNISSNSDAHKPRRKRRPKKKKPQA 335
           SSNS T HSSNISSNSDAHKPRRKRRPKKKK QA
Sbjct: 301 SSNSQTGHSSNISSNSDAHKPRRKRRPKKKKQQA 332

[Close]

BLAST of Sed0027984 vs. NCBI nr
Match: XP_022946509.1 (rRNA-processing protein EFG1 isoform X2 [Cucurbita moschata])

HSP 1 Score: 518.8 bits (1335), Expect = 3.4e-143
Identity = 303/335 (90.45%), Postives = 316/335 (94.33%), Query Frame = 0


Query: 1   MAHGGYGNRRVNPPPRRSKALAVDKKKPKSVSLKNQIRSAERMLLRKNLPAEIREAQEKK 60
           MAHGGYG RRVNP  RRSKALAV+ KKPKSVSLKNQIRSAERM LRKNLPAE+RE QEKK
Sbjct: 1   MAHGGYGKRRVNPAARRSKALAVE-KKPKSVSLKNQIRSAERM-LRKNLPAEVREVQEKK 60

Query: 61  LEGLKKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRLRRLEKLQRAPSGQLQDSDVAD 120
           LEGL+KQQEIHSRLAVERKIFLRDRKIKFFERRKIERR+RRLEKLQRAPSGQ QDSD+AD
Sbjct: 61  LEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQSQDSDIAD 120

Query: 121 QLSKLKEDLEYVRFFPKTEKYVALFTGGDESDMVDKRNKLRKQIKANLIAAAASGKDLEE 180
           QLSKLKEDLEYVRFFPKTEKY+ALFTG D+SD VD+RNKLRKQIKANLIAAAASGKDLEE
Sbjct: 121 QLSKLKEDLEYVRFFPKTEKYLALFTGSDDSDTVDRRNKLRKQIKANLIAAAASGKDLEE 180

Query: 181 TGSEDDGLLDMSEDDFFVSGSSSDEADADDECTDKSSREQASSASGKAASGMSSDEKNH- 240
           TGSEDDGLLDMSEDDFFVSGSSSDEADADDE TDKS+RE ASS SGKAASGMSSDE+NH 
Sbjct: 181 TGSEDDGLLDMSEDDFFVSGSSSDEADADDEWTDKSAREHASSTSGKAASGMSSDERNHQ 240

Query: 241 QISARALMPPPRPTKSFSSSAQARSKPGSSLRKFSTNHRAEGSTSNNRSSSRSGSSFRAR 300
           QISARALMPPPRPTKSF SSAQARSKPGSSLRKFSTN RAE S+S+N SSSRSGSSF+AR
Sbjct: 241 QISARALMPPPRPTKSFPSSAQARSKPGSSLRKFSTNRRAEVSSSSNTSSSRSGSSFKAR 300

Query: 301 GSSNSHTSHSSNISSNSDAHKPRRKRRPKKKKPQA 335
           GSSNSHT HSSNISSNSDAHKPRRKRRPKKKK QA
Sbjct: 301 GSSNSHTGHSSNISSNSDAHKPRRKRRPKKKKQQA 333

[Close]

BLAST of Sed0027984 vs. NCBI nr
Match: XP_038877104.1 (rRNA-processing protein efg1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 518.5 bits (1334), Expect = 4.4e-143
Identity = 303/335 (90.45%), Postives = 315/335 (94.03%), Query Frame = 0


Query: 1   MAHGGYGNRRVNPPPRRSKALAVDKKKPKSVSLKNQIRSAERMLLRKNLPAEIREAQEKK 60
           MAHGGYG RRVNPP RRSK LAV+ KKPKSVSLKNQIRSAERM LRKNLPAE+REAQEKK
Sbjct: 87  MAHGGYGKRRVNPPARRSKGLAVE-KKPKSVSLKNQIRSAERM-LRKNLPAEVREAQEKK 146

Query: 61  LEGLKKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRLRRLEKLQRAPSGQLQDSDVAD 120
           LEGL+KQQEIHSRLAVERKIFLRDRKIKFFERRKIERR+RRLEKLQRAPSGQLQDSDVAD
Sbjct: 147 LEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQLQDSDVAD 206

Query: 121 QLSKLKEDLEYVRFFPKTEKYVALFTGGDESDMVDKRNKLRKQIKANLIAAAASGKDLEE 180
           QLSKLKEDLEYVRFFPKTEKYVALFTGGD+SDMVD+RNKLR+QIKANLIAAAASGKDLEE
Sbjct: 207 QLSKLKEDLEYVRFFPKTEKYVALFTGGDDSDMVDRRNKLREQIKANLIAAAASGKDLEE 266

Query: 181 TGSEDDGLLDMSEDDFFVSGSSSDEADADDECTDKSSREQASSASGKAASGMSSDEKNH- 240
           TGSEDDGLLDMSEDDFF+ GSSSDEADADDE TDKS+REQASS SGKAASGMSSDE+NH 
Sbjct: 267 TGSEDDGLLDMSEDDFFLCGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDERNHQ 326

Query: 241 -QISARALMPPPRPTKSFSSSAQARSKPGSSLRKFSTNHRAEGSTSNNRSSSRSGSSFRA 300
            QISAR LMPPPRPTKSFSSSAQARSK GSSLRK STNHRAE STS+N S SRSGSSF+ 
Sbjct: 327 RQISARVLMPPPRPTKSFSSSAQARSKAGSSLRKSSTNHRAEFSTSSNTSGSRSGSSFKV 386

Query: 301 RGSSNSHTSHSSNISSNSDAHKPRRKRRPKKKKPQ 334
           RGSSNSHT  SSNISSNSDAHKPRRKRRPKKKK Q
Sbjct: 387 RGSSNSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ 419

[Close]

BLAST of Sed0027984 vs. ExPASy Swiss-Prot
Match: Q09867 (rRNA-processing protein efg1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=efg1 PE=3 SV=2)

HSP 1 Score: 72.8 bits (177), Expect = 8.3e-12
Identity = 49/136 (36.03%), Postives = 78/136 (57.35%), Query Frame = 0


Query: 26  KKPKSVSLKNQIRSAERMLLRKNLPAEIREAQEKKLEGLKKQQEIHSRLAVERKIFLRDR 85
           K P    LK +IR  ER+L ++NLPA IR   E+ L GL++Q  +      ++KIF R +
Sbjct: 5   KGPGLSVLKKKIRDNERLLKKENLPANIRVEHERALLGLQEQLSMAQLEHKKQKIFERYK 64

Query: 86  KIKFFERRKIERRLRRLEK-LQRAPSGQLQDSDVADQLSKLKEDLEYVRFFPKTEKYVAL 145
           K++FFER+K ERR+++LEK L+       +       + K + DL Y++ +P   KYV+L
Sbjct: 65  KVRFFERKKAERRIKQLEKSLKDETMDDEKRKQCEKSMRKCQIDLMYIKEYPPLTKYVSL 124

Query: 146 FTGGDESDMVDKRNKL 161
           +  G      + RN++
Sbjct: 125 YAEGTSEQTEETRNRI 140

[Close]

BLAST of Sed0027984 vs. ExPASy Swiss-Prot
Match: A8N5J5 (rRNA-processing protein EFG1 OS=Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) OX=240176 GN=EFG1 PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.5e-08
Identity = 46/161 (28.57%), Postives = 90/161 (55.90%), Query Frame = 0


Query: 14  PPRRSKALAVDKKKPKSVSLKNQIRSAERMLLRKNLPAEIREAQEKKLEGLKKQQEIHSR 73
           P  + KA A+    P    +K+ +R   R+L ++NL A+ R   E++L+ L+ + +   +
Sbjct: 28  PNHQPKASAL----PGKQKIKSSLRQVRRLLAKENLAADKRVEAERRLKALEAELQQVEQ 87

Query: 74  LAVERKIFLRDRKIKFFERRKIERRLRRLEKLQRAPSGQLQDSDVADQLSKLKEDLEYVR 133
              ER + +R  K+KFFER+K+ R+L ++++   +  G  +   +  QL + + +L Y+ 
Sbjct: 88  AHKERALAIRYHKVKFFERQKVTRKLNQVKRRLDSADGS-EKEQLEAQLLEERVNLNYIL 147

Query: 134 FFPKTEKYVALF---------TGGDESDMVDKRNKLRKQIK 166
            +PKT+KY++LF         T   ++D  +K N+ R++I+
Sbjct: 148 HYPKTKKYISLFPPEVRKGEVTEASKTD-AEKTNREREEIR 182

[Close]

BLAST of Sed0027984 vs. ExPASy Swiss-Prot
Match: A3LNR4 (rRNA-processing protein EFG1 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) OX=322104 GN=EFG1 PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.8e-06
Identity = 47/170 (27.65%), Postives = 83/170 (48.82%), Query Frame = 0


Query: 14  PPRRSKALAVDKKKPKSVS-------------LKNQIRSAERMLLRKNLPAEIREAQEKK 73
           PP+ +K     K++P   S             LK +IR  ER+L +  LPA++R   E+ 
Sbjct: 2   PPKAAKG----KRRPNGASIEVAGVLGGGASRLKKKIRDIERLLKKDKLPADVRTENERA 61

Query: 74  LEGLKKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRLRRLEKLQRAPSGQLQDSDVAD 133
           ++ LK + +        +++  +   ++FFE++K  R+L++  K        +  +DV  
Sbjct: 62  VKALKVELQNTQFNLKAKQVAKKYHMVRFFEKKKAVRKLKQANKNLE----DISKTDVRK 121

Query: 134 QLSKLKE-------DLEYVRFFPKTEKYVALFTGGDESDMVDKRNKLRKQ 164
            + K ++       DL YV  FPK+EKY++L+    E+D VD  N   K+
Sbjct: 122 DIKKARKQVKHCEIDLAYVIMFPKSEKYISLYPNPKENDEVDVSNPKAKK 163

[Close]

BLAST of Sed0027984 vs. ExPASy Swiss-Prot
Match: P0CN35 (rRNA-processing protein EFG1 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=EFG1 PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.4e-06
Identity = 39/119 (32.77%), Postives = 67/119 (56.30%), Query Frame = 0


Query: 28  PKSVSLKNQIRSAERMLLRKNLPAEIREAQEKKLEGLKKQQEIHSRLAVERKIFLRDRKI 87
           P    LK+ IR  +R+L ++NL   +R + +++L  L+       R  VERK   +  K+
Sbjct: 51  PGLSKLKSSIRQTKRLLAKENLEPGLRVSTQRRLTSLEADLAAAERREVERKNGAKYHKV 110

Query: 88  KFFERRKIERRLRRLE-KLQRAPSGQLQDSDVADQLSKLKEDLEYVRFFPKTEKYVALF 146
           KFFER+K+ R ++R + KL  + +   + S   ++L   +  L YV  +P T+KY++LF
Sbjct: 111 KFFERQKLVRLIKRFKRKLLDSETSSKKRSKHEEELLDARIMLNYVLHYPNTQKYISLF 169

[Close]

BLAST of Sed0027984 vs. ExPASy Swiss-Prot
Match: P0CN34 (rRNA-processing protein EFG1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=EFG1 PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.4e-06
Identity = 39/119 (32.77%), Postives = 67/119 (56.30%), Query Frame = 0


Query: 28  PKSVSLKNQIRSAERMLLRKNLPAEIREAQEKKLEGLKKQQEIHSRLAVERKIFLRDRKI 87
           P    LK+ IR  +R+L ++NL   +R + +++L  L+       R  VERK   +  K+
Sbjct: 51  PGLSKLKSSIRQTKRLLAKENLEPGLRVSTQRRLTSLEADLAAAERREVERKNGAKYHKV 110

Query: 88  KFFERRKIERRLRRLE-KLQRAPSGQLQDSDVADQLSKLKEDLEYVRFFPKTEKYVALF 146
           KFFER+K+ R ++R + KL  + +   + S   ++L   +  L YV  +P T+KY++LF
Sbjct: 111 KFFERQKLVRLIKRFKRKLLDSETSSKKRSKHEEELLDARIMLNYVLHYPNTQKYISLF 169

[Close]

BLAST of Sed0027984 vs. ExPASy TrEMBL
Match: A0A6J1G428 (rRNA-processing protein EFG1 OS=Cucurbita moschata OX=3662 GN=LOC111450540 PE=3 SV=1)

HSP 1 Score: 523.5 bits (1347), Expect = 6.6e-145
Identity = 303/334 (90.72%), Postives = 316/334 (94.61%), Query Frame = 0


Query: 1   MAHGGYGNRRVNPPPRRSKALAVDKKKPKSVSLKNQIRSAERMLLRKNLPAEIREAQEKK 60
           MAHGGYG RRVNP  RRSKALAV+ KKPKSVSLKNQIRSAERM LRKNLPAE+RE QEKK
Sbjct: 1   MAHGGYGKRRVNPAARRSKALAVE-KKPKSVSLKNQIRSAERM-LRKNLPAEVREVQEKK 60

Query: 61  LEGLKKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRLRRLEKLQRAPSGQLQDSDVAD 120
           LEGL+KQQEIHSRLAVERKIFLRDRKIKFFERRKIERR+RRLEKLQRAPSGQ QDSD+AD
Sbjct: 61  LEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQSQDSDIAD 120

Query: 121 QLSKLKEDLEYVRFFPKTEKYVALFTGGDESDMVDKRNKLRKQIKANLIAAAASGKDLEE 180
           QLSKLKEDLEYVRFFPKTEKY+ALFTG D+SD VD+RNKLRKQIKANLIAAAASGKDLEE
Sbjct: 121 QLSKLKEDLEYVRFFPKTEKYLALFTGSDDSDTVDRRNKLRKQIKANLIAAAASGKDLEE 180

Query: 181 TGSEDDGLLDMSEDDFFVSGSSSDEADADDECTDKSSREQASSASGKAASGMSSDEKNHQ 240
           TGSEDDGLLDMSEDDFFVSGSSSDEADADDE TDKS+RE ASS SGKAASGMSSDE+NHQ
Sbjct: 181 TGSEDDGLLDMSEDDFFVSGSSSDEADADDEWTDKSAREHASSTSGKAASGMSSDERNHQ 240

Query: 241 ISARALMPPPRPTKSFSSSAQARSKPGSSLRKFSTNHRAEGSTSNNRSSSRSGSSFRARG 300
           ISARALMPPPRPTKSF SSAQARSKPGSSLRKFSTN RAE S+S+N SSSRSGSSF+ARG
Sbjct: 241 ISARALMPPPRPTKSFPSSAQARSKPGSSLRKFSTNRRAEVSSSSNTSSSRSGSSFKARG 300

Query: 301 SSNSHTSHSSNISSNSDAHKPRRKRRPKKKKPQA 335
           SSNSHT HSSNISSNSDAHKPRRKRRPKKKK QA
Sbjct: 301 SSNSHTGHSSNISSNSDAHKPRRKRRPKKKKQQA 332

[Close]

BLAST of Sed0027984 vs. ExPASy TrEMBL
Match: A0A6J1IHJ8 (rRNA-processing protein EFG1 OS=Cucurbita maxima OX=3661 GN=LOC111473089 PE=3 SV=1)

HSP 1 Score: 518.8 bits (1335), Expect = 1.6e-143
Identity = 301/334 (90.12%), Postives = 314/334 (94.01%), Query Frame = 0


Query: 1   MAHGGYGNRRVNPPPRRSKALAVDKKKPKSVSLKNQIRSAERMLLRKNLPAEIREAQEKK 60
           MAHGGYG RRVNP  RRSKALAV+ KKPKSVSLKNQIRSAERM LRKNLPAE+RE QEKK
Sbjct: 1   MAHGGYGKRRVNPAARRSKALAVE-KKPKSVSLKNQIRSAERM-LRKNLPAEVREVQEKK 60

Query: 61  LEGLKKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRLRRLEKLQRAPSGQLQDSDVAD 120
           LEGL+KQQEIHSRLAVERKIFLRDRKIKFFERRKIERR+RRLEKLQRAPSGQ QDSD+AD
Sbjct: 61  LEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQSQDSDIAD 120

Query: 121 QLSKLKEDLEYVRFFPKTEKYVALFTGGDESDMVDKRNKLRKQIKANLIAAAASGKDLEE 180
           QLSKLKEDLEYVRFFPKTEKY+ALFTG D+SD VD+RNKLRKQIKANLIAAAASGKDLEE
Sbjct: 121 QLSKLKEDLEYVRFFPKTEKYLALFTGSDDSDTVDRRNKLRKQIKANLIAAAASGKDLEE 180

Query: 181 TGSEDDGLLDMSEDDFFVSGSSSDEADADDECTDKSSREQASSASGKAASGMSSDEKNHQ 240
           TGSEDDGLLDMSEDDFFVSGSSSDEADADDE TDKS+RE ASS SGKAASGMSSDE+NHQ
Sbjct: 181 TGSEDDGLLDMSEDDFFVSGSSSDEADADDEWTDKSAREHASSTSGKAASGMSSDERNHQ 240

Query: 241 ISARALMPPPRPTKSFSSSAQARSKPGSSLRKFSTNHRAEGSTSNNRSSSRSGSSFRARG 300
           ISARALMPPPRPTKSF SSAQARSKPGSSLRKFSTN RAE S+S+N SSSRSGSSF+ RG
Sbjct: 241 ISARALMPPPRPTKSFPSSAQARSKPGSSLRKFSTNRRAEVSSSSNTSSSRSGSSFKVRG 300

Query: 301 SSNSHTSHSSNISSNSDAHKPRRKRRPKKKKPQA 335
           SSNS T HSSNISSNSDAHKPRRKRRPKKKK QA
Sbjct: 301 SSNSQTGHSSNISSNSDAHKPRRKRRPKKKKQQA 332

[Close]

BLAST of Sed0027984 vs. ExPASy TrEMBL
Match: A0A6J1G412 (rRNA-processing protein EFG1 OS=Cucurbita moschata OX=3662 GN=LOC111450540 PE=3 SV=1)

HSP 1 Score: 518.8 bits (1335), Expect = 1.6e-143
Identity = 303/335 (90.45%), Postives = 316/335 (94.33%), Query Frame = 0


Query: 1   MAHGGYGNRRVNPPPRRSKALAVDKKKPKSVSLKNQIRSAERMLLRKNLPAEIREAQEKK 60
           MAHGGYG RRVNP  RRSKALAV+ KKPKSVSLKNQIRSAERM LRKNLPAE+RE QEKK
Sbjct: 1   MAHGGYGKRRVNPAARRSKALAVE-KKPKSVSLKNQIRSAERM-LRKNLPAEVREVQEKK 60

Query: 61  LEGLKKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRLRRLEKLQRAPSGQLQDSDVAD 120
           LEGL+KQQEIHSRLAVERKIFLRDRKIKFFERRKIERR+RRLEKLQRAPSGQ QDSD+AD
Sbjct: 61  LEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQSQDSDIAD 120

Query: 121 QLSKLKEDLEYVRFFPKTEKYVALFTGGDESDMVDKRNKLRKQIKANLIAAAASGKDLEE 180
           QLSKLKEDLEYVRFFPKTEKY+ALFTG D+SD VD+RNKLRKQIKANLIAAAASGKDLEE
Sbjct: 121 QLSKLKEDLEYVRFFPKTEKYLALFTGSDDSDTVDRRNKLRKQIKANLIAAAASGKDLEE 180

Query: 181 TGSEDDGLLDMSEDDFFVSGSSSDEADADDECTDKSSREQASSASGKAASGMSSDEKNH- 240
           TGSEDDGLLDMSEDDFFVSGSSSDEADADDE TDKS+RE ASS SGKAASGMSSDE+NH 
Sbjct: 181 TGSEDDGLLDMSEDDFFVSGSSSDEADADDEWTDKSAREHASSTSGKAASGMSSDERNHQ 240

Query: 241 QISARALMPPPRPTKSFSSSAQARSKPGSSLRKFSTNHRAEGSTSNNRSSSRSGSSFRAR 300
           QISARALMPPPRPTKSF SSAQARSKPGSSLRKFSTN RAE S+S+N SSSRSGSSF+AR
Sbjct: 241 QISARALMPPPRPTKSFPSSAQARSKPGSSLRKFSTNRRAEVSSSSNTSSSRSGSSFKAR 300

Query: 301 GSSNSHTSHSSNISSNSDAHKPRRKRRPKKKKPQA 335
           GSSNSHT HSSNISSNSDAHKPRRKRRPKKKK QA
Sbjct: 301 GSSNSHTGHSSNISSNSDAHKPRRKRRPKKKKQQA 333

[Close]

BLAST of Sed0027984 vs. ExPASy TrEMBL
Match: A0A6J1G415 (rRNA-processing protein EFG1 OS=Cucurbita moschata OX=3662 GN=LOC111450540 PE=3 SV=1)

HSP 1 Score: 518.1 bits (1333), Expect = 2.8e-143
Identity = 303/337 (89.91%), Postives = 316/337 (93.77%), Query Frame = 0


Query: 1   MAHGGYGNRRVNPPPRRSKALAVDKKKPKSVSLKNQIRSAERMLLRKNLPAEIREAQEKK 60
           MAHGGYG RRVNP  RRSKALAV+ KKPKSVSLKNQIRSAERM LRKNLPAE+RE QEKK
Sbjct: 1   MAHGGYGKRRVNPAARRSKALAVE-KKPKSVSLKNQIRSAERM-LRKNLPAEVREVQEKK 60

Query: 61  LEGLKKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRLRRLEKLQRAPSGQLQDSDVAD 120
           LEGL+KQQEIHSRLAVERKIFLRDRKIKFFERRKIERR+RRLEKLQRAPSGQ QDSD+AD
Sbjct: 61  LEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQSQDSDIAD 120

Query: 121 QLSKLKEDLEYVRFFPKTEKYVALFTGGDESDMVDKRNKLRKQIKANLIAAAASGKDLEE 180
           QLSKLKEDLEYVRFFPKTEKY+ALFTG D+SD VD+RNKLRKQIKANLIAAAASGKDLEE
Sbjct: 121 QLSKLKEDLEYVRFFPKTEKYLALFTGSDDSDTVDRRNKLRKQIKANLIAAAASGKDLEE 180

Query: 181 TGSEDDGLLDMSEDDFFVSGSSSDEADADDECTDKSSREQASSASGKAASGMSSDEKNH- 240
           TGSEDDGLLDMSEDDFFVSGSSSDEADADDE TDKS+RE ASS SGKAASGMSSDE+NH 
Sbjct: 181 TGSEDDGLLDMSEDDFFVSGSSSDEADADDEWTDKSAREHASSTSGKAASGMSSDERNHQ 240

Query: 241 --QISARALMPPPRPTKSFSSSAQARSKPGSSLRKFSTNHRAEGSTSNNRSSSRSGSSFR 300
             QISARALMPPPRPTKSF SSAQARSKPGSSLRKFSTN RAE S+S+N SSSRSGSSF+
Sbjct: 241 RQQISARALMPPPRPTKSFPSSAQARSKPGSSLRKFSTNRRAEVSSSSNTSSSRSGSSFK 300

Query: 301 ARGSSNSHTSHSSNISSNSDAHKPRRKRRPKKKKPQA 335
           ARGSSNSHT HSSNISSNSDAHKPRRKRRPKKKK QA
Sbjct: 301 ARGSSNSHTGHSSNISSNSDAHKPRRKRRPKKKKQQA 335

[Close]

BLAST of Sed0027984 vs. ExPASy TrEMBL
Match: A0A6J1IA73 (rRNA-processing protein EFG1 OS=Cucurbita maxima OX=3661 GN=LOC111473089 PE=3 SV=1)

HSP 1 Score: 514.2 bits (1323), Expect = 4.0e-142
Identity = 301/335 (89.85%), Postives = 314/335 (93.73%), Query Frame = 0


Query: 1   MAHGGYGNRRVNPPPRRSKALAVDKKKPKSVSLKNQIRSAERMLLRKNLPAEIREAQEKK 60
           MAHGGYG RRVNP  RRSKALAV+ KKPKSVSLKNQIRSAERM LRKNLPAE+RE QEKK
Sbjct: 1   MAHGGYGKRRVNPAARRSKALAVE-KKPKSVSLKNQIRSAERM-LRKNLPAEVREVQEKK 60

Query: 61  LEGLKKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRLRRLEKLQRAPSGQLQDSDVAD 120
           LEGL+KQQEIHSRLAVERKIFLRDRKIKFFERRKIERR+RRLEKLQRAPSGQ QDSD+AD
Sbjct: 61  LEGLRKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQSQDSDIAD 120

Query: 121 QLSKLKEDLEYVRFFPKTEKYVALFTGGDESDMVDKRNKLRKQIKANLIAAAASGKDLEE 180
           QLSKLKEDLEYVRFFPKTEKY+ALFTG D+SD VD+RNKLRKQIKANLIAAAASGKDLEE
Sbjct: 121 QLSKLKEDLEYVRFFPKTEKYLALFTGSDDSDTVDRRNKLRKQIKANLIAAAASGKDLEE 180

Query: 181 TGSEDDGLLDMSEDDFFVSGSSSDEADADDECTDKSSREQASSASGKAASGMSSDEKNH- 240
           TGSEDDGLLDMSEDDFFVSGSSSDEADADDE TDKS+RE ASS SGKAASGMSSDE+NH 
Sbjct: 181 TGSEDDGLLDMSEDDFFVSGSSSDEADADDEWTDKSAREHASSTSGKAASGMSSDERNHQ 240

Query: 241 QISARALMPPPRPTKSFSSSAQARSKPGSSLRKFSTNHRAEGSTSNNRSSSRSGSSFRAR 300
           QISARALMPPPRPTKSF SSAQARSKPGSSLRKFSTN RAE S+S+N SSSRSGSSF+ R
Sbjct: 241 QISARALMPPPRPTKSFPSSAQARSKPGSSLRKFSTNRRAEVSSSSNTSSSRSGSSFKVR 300

Query: 301 GSSNSHTSHSSNISSNSDAHKPRRKRRPKKKKPQA 335
           GSSNS T HSSNISSNSDAHKPRRKRRPKKKK QA
Sbjct: 301 GSSNSQTGHSSNISSNSDAHKPRRKRRPKKKKQQA 333

[Close]

BLAST of Sed0027984 vs. TAIR 10
Match: AT5G43720.1 (Protein of unknown function (DUF2361) )

HSP 1 Score: 349.7 bits (896), Expect = 2.5e-96
Identity = 221/341 (64.81%), Postives = 265/341 (77.71%), Query Frame = 0


Query: 1   MAHGGYGNRRVNPP------PRRSKALAVDKKKPKSVSLKNQIRSAERMLLRKNLPAEIR 60
           MAHGGY  RR + P       RRSK L V+ KKPK+VS+KNQ+RS ER  LRK+LP E+R
Sbjct: 1   MAHGGYAKRRDSEPKQTAGSSRRSKVLRVE-KKPKTVSIKNQMRSVER-FLRKDLPPEVR 60

Query: 61  EAQEKKLEGLKKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRLRRLEKLQRAPSGQLQ 120
           E+  +KLE LKKQQ+ H+RLAVERKIF R+RKIKFFERRKIER +RRLEKLQR  S  + 
Sbjct: 61  ESLVEKLEDLKKQQDAHARLAVERKIFFRNRKIKFFERRKIERSIRRLEKLQRTSSAHVG 120

Query: 121 DSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGGDESDMVDKRNKLRKQIKANLIAAAAS 180
           D D+A+QLSKLKEDLEYVRFFPK EKYV+LFTG ++S++++KR K+R+QIKAN+I AAAS
Sbjct: 121 DVDIAEQLSKLKEDLEYVRFFPKNEKYVSLFTGAEDSEVIEKRGKMRQQIKANIIVAAAS 180

Query: 181 GKDLEETGSEDDGLLDMSEDDFFVSGSSSDEADADDECTDKSSREQASSASGKAASGMSS 240
           GK+LEETGSEDDGLLD+S+DDFF  GSSSDEADADDE TDKS++E ASSASG+A SGMSS
Sbjct: 181 GKELEETGSEDDGLLDLSDDDFFDKGSSSDEADADDELTDKSAKEAASSASGRATSGMSS 240

Query: 241 DEKNH-QISARALMPPPRPTKSFSSSAQARSKPGSSLRKFSTNHRAEGSTSNNRSSSRSG 300
           DE+N  Q S RALMPPP          QAR +  S    +   +    S+ NN S+ RS 
Sbjct: 241 DERNQKQNSDRALMPPP----------QARFESNSRKNLYVQRNEMPSSSRNNTSNRRSE 300

Query: 301 SSFRARGS-SNSHTSHSSNISSNSDAHKPRRKRRPKKKKPQ 334
           SS+ AR S +NS++S SSN+SSNSDAHKP+RKRRPKKKK Q
Sbjct: 301 SSYNARASAANSYSSQSSNLSSNSDAHKPKRKRRPKKKKQQ 329

[Close]

BLAST of Sed0027984 vs. TAIR 10
Match: AT1G04230.1 (Protein of unknown function (DUF2361) )

HSP 1 Score: 332.8 bits (852), Expect = 3.2e-91
Identity = 217/342 (63.45%), Postives = 263/342 (76.90%), Query Frame = 0


Query: 1   MAHGGYGNRRVNP------PPRRSKALAVDKKKPKSVSLKNQIRSAERMLLRKNLPAEIR 60
           MAHGGY  RRV          RRSK L V+ KKPK+ SLKNQIRS  RM +RK+LP E+R
Sbjct: 1   MAHGGYARRRVAERKTTAGTSRRSKGLRVE-KKPKNSSLKNQIRSIGRM-IRKDLPPEVR 60

Query: 61  EAQEKKLEGLKKQQEIHSRLAVERKIFLRDRKIKFFERRKIERRLRRLEKLQRAPS-GQL 120
           EA EKKL+ LKKQQ+IH RLA ERKIFLR+RK++FFERRKIER +RRLEKL R+ S G +
Sbjct: 61  EALEKKLDDLKKQQDIHFRLAFERKIFLRNRKVRFFERRKIERSIRRLEKLHRSTSGGYV 120

Query: 121 QDSDVADQLSKLKEDLEYVRFFPKTEKYVALFTGGDESDMVDKRNKLRKQIKANLIAAAA 180
           QD+++  QL++LKEDLEYVRFFPK EKYV+LF+G D+  + ++R+KLRKQIKAN+I AAA
Sbjct: 121 QDAEIGGQLNRLKEDLEYVRFFPKNEKYVSLFSGSDDLQVSERRSKLRKQIKANIIFAAA 180

Query: 181 SGKDLEETGSEDDGLLDMSEDDFFVSGSSSDEADADDECTDKSSREQASSASGKAASGMS 240
           SGK+LEETGSEDD LLD+S+DDFFV+GSSSDEADADDE TDKS++E  SSASG+A S MS
Sbjct: 181 SGKELEETGSEDDALLDLSDDDFFVNGSSSDEADADDEWTDKSTKEPVSSASGRATSSMS 240

Query: 241 SDEKNHQ-ISARALMPPPRPTKSFSSSAQARSKPGSSLRKFSTNHRAEGSTSNNRSSSRS 300
           SDE+N +  S R LMPPP            RS+  S+ R++S+  R E  +S+N S  RS
Sbjct: 241 SDERNQKPYSTRVLMPPP------------RSRFASTSRQYSSVKRNEIPSSSNTSHRRS 300

Query: 301 GSSFRARGSSNSHTSHSSNISSNSDAHKPRRKRRPKKKKPQA 335
            SS  A   ++SHTS SSN+SSNSDAHKP+RKRRPKKKK QA
Sbjct: 301 QSSHAA---TSSHTSQSSNLSSNSDAHKPKRKRRPKKKKLQA 325

The following BLAST results are available for this feature:

BLAST of Sed0027984 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877105.1	1.4e-144	90.99	rRNA-processing protein efg1-like isoform X2 [Benincasa hispida]	[more]
XP_022946524.1	1.4e-144	90.72	rRNA-processing protein EFG1 isoform X4 [Cucurbita moschata]	[more]
XP_022974419.1	3.4e-143	90.12	rRNA-processing protein EFG1 isoform X4 [Cucurbita maxima]	[more]
XP_022946509.1	3.4e-143	90.45	rRNA-processing protein EFG1 isoform X2 [Cucurbita moschata]	[more]
XP_038877104.1	4.4e-143	90.45	rRNA-processing protein efg1-like isoform X1 [Benincasa hispida]	[more]

BLAST of Sed0027984 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q09867	8.3e-12	36.03	rRNA-processing protein efg1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
A8N5J5	2.5e-08	28.57	rRNA-processing protein EFG1 OS=Coprinopsis cinerea (strain Okayama-7 / 130 / AT...	[more]
A3LNR4	1.8e-06	27.65	rRNA-processing protein EFG1 OS=Scheffersomyces stipitis (strain ATCC 58785 / CB...	[more]
P0CN35	2.4e-06	32.77	rRNA-processing protein EFG1 OS=Cryptococcus neoformans var. neoformans serotype...	[more]
P0CN34	2.4e-06	32.77	rRNA-processing protein EFG1 OS=Cryptococcus neoformans var. neoformans serotype...	[more]

BLAST of Sed0027984 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G428	6.6e-145	90.72	rRNA-processing protein EFG1 OS=Cucurbita moschata OX=3662 GN=LOC111450540 PE=3 ...	[more]
A0A6J1IHJ8	1.6e-143	90.12	rRNA-processing protein EFG1 OS=Cucurbita maxima OX=3661 GN=LOC111473089 PE=3 SV...	[more]
A0A6J1G412	1.6e-143	90.45	rRNA-processing protein EFG1 OS=Cucurbita moschata OX=3662 GN=LOC111450540 PE=3 ...	[more]
A0A6J1G415	2.8e-143	89.91	rRNA-processing protein EFG1 OS=Cucurbita moschata OX=3662 GN=LOC111450540 PE=3 ...	[more]
A0A6J1IA73	4.0e-142	89.85	rRNA-processing protein EFG1 OS=Cucurbita maxima OX=3661 GN=LOC111473089 PE=3 SV...	[more]

BLAST of Sed0027984 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43720.1	2.5e-96	64.81	Protein of unknown function (DUF2361)	[more]
AT1G04230.1	3.2e-91	63.45	Protein of unknown function (DUF2361)	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019310	rRNA-processing protein Efg1	PFAM	PF10153	Efg1	coord: 33..145 e-value: 1.7E-29 score: 102.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 252..316
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 218..240
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 319..334
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 175..347
None	No IPR available	PANTHER	PTHR33911:SF2	SUBFAMILY NOT NAMED	coord: 1..342
None	No IPR available	PANTHER	PTHR33911	RRNA-PROCESSING PROTEIN EFG1	coord: 1..342

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0027984.1	Sed0027984.1	mRNA
Sed0027984.2	Sed0027984.2	mRNA
Sed0027984.3	Sed0027984.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0030688	preribosome, small subunit precursor