Sed0027955 (gene) Chayote v1

Overview


Name	Sed0027955
Type	gene
Organism	Sechium edule (Chayote v1)
Description	S-protein homolog
Location	LG01: 12476291 .. 12477598 (-)
RNA-Seq Expression	Sed0027955
Synteny	Sed0027955

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTTGTTTGATCGTGTTGCTTGCTTTTGTATCAAACATGAATATCAAGACATGTTTTGCACATTCCCGATCCAAATTTCAAAAGCCATTGTCCCCATGGGAAGTGAGCATTTTGAATCAGATGAAGGATTCGACATTGGTCGTTCATTCCAAATAAATTGATGACTTCAGAAACAAAAAATATTAAACACTCAACCACTTGTTAGATAATACGATATTAAAACAAAAAATTATAGTTTTGTTAGATATTTTTTAAAAAGTCCAAAACTTAATATACAATTTTTAGTAGTTTAAAGACTTAACTAGACAAAGTTTGAAGTTTCTTACTAAACTTATTTATCCCACAATCAAATTTGAAAGTTGGACTAAATTTATAATTTAACACCCTAATTTATTTTAAATTGGATAGTAAATTAAATATTTATTTAATTTTACATCTTTAATTAAAAGGAAATTTTTGCTACCAAAGTTAGTTTTGATATATCAAATATGTTAACTACAAGGTCTTTAGTTCAATCCACCAACCTTTTAATGTACGAAAAAAAAAAACAAAAAGAAAAAGAAATTTTGTGCAATCAGCAAGGCTCTCAATGAATTTGAATGGAAAAAAATGGCCAGCAAGAATAATTAAGATATTTCCAAAAATACCAACTTTTCATTTAAACAAATAAGTAAAATGGGTTGTGTTGCGTGCAAAAAGTTAGTAACGGCTAATTCCCATTTTTCCTTTATCACACATACCATGTATTTATATTTGGAATATTTCCATAAAGAAATTCAATTTGGGTTATATATATATATATGAGACCAAAACCAAAATGCTTTGTGTGCAAAAGTGACCAAACTCAAGTCCAAGAAAATGAAGGTTCTAAGTCTTATAACCATGTTTTATTTGGTTCTATTGCTTGCTTTTGAACCAAATCTTATCAAGGCATGTTTTGCAGCATCCAAGATACAACCTCCATTATCCAAATGGCAAGTGACCATTATCAATGACATGGTTACATCAACTCTCGCGGTACATTGCAAGTCGAAAGACGATGATTTAGGCGAACACGTACTCGCCACGGCCGAGCAATATAGCTGGAGGTTTAAAGAAAATCTTTGGCAATCCACATTGTATTGGTGCACTTTTAGTAGTAAATATGGAAAAACTTCTGGTAATGTTTTTTTCCCGGAGGAAGGGCGTTGGCTTAGTGATAAATGTAAAAATCATAATTGTATTTGGATGAGTACAATGGAAGGAATCAAATTGAAACTTGGTTCAGTTGAAGCCTATGATTTAAGGTACCCTCGGAGCATATGA

mRNA sequence

ATGTTTTGTTTGATCGTGTTGCTTGCTTTTGTATCAAACATGAATATCAAGACATCATCCAAGATACAACCTCCATTATCCAAATGGCAAGTGACCATTATCAATGACATGGTTACATCAACTCTCGCGGTACATTGCAAGTCGAAAGACGATGATTTAGGCGAACACGTACTCGCCACGGCCGAGCAATATAGCTGGAGGTTTAAAGAAAATCTTTGGCAATCCACATTGTATTGGTGCACTTTTAGTAGTAAATATGGAAAAACTTCTGGTAATGTTTTTTTCCCGGAGGAAGGGCGTTGGCTTAGTGATAAATGTAAAAATCATAATTGTATTTGGATGAGTACAATGGAAGGAATCAAATTGAAACTTGGTTCAGTTGAAGCCTATGATTTAAGGTACCCTCGGAGCATATGA

Coding sequence (CDS)

ATGTTTTGTTTGATCGTGTTGCTTGCTTTTGTATCAAACATGAATATCAAGACATCATCCAAGATACAACCTCCATTATCCAAATGGCAAGTGACCATTATCAATGACATGGTTACATCAACTCTCGCGGTACATTGCAAGTCGAAAGACGATGATTTAGGCGAACACGTACTCGCCACGGCCGAGCAATATAGCTGGAGGTTTAAAGAAAATCTTTGGCAATCCACATTGTATTGGTGCACTTTTAGTAGTAAATATGGAAAAACTTCTGGTAATGTTTTTTTCCCGGAGGAAGGGCGTTGGCTTAGTGATAAATGTAAAAATCATAATTGTATTTGGATGAGTACAATGGAAGGAATCAAATTGAAACTTGGTTCAGTTGAAGCCTATGATTTAAGGTACCCTCGGAGCATATGA

Protein sequence

MFCLIVLLAFVSNMNIKTSSKIQPPLSKWQVTIINDMVTSTLAVHCKSKDDDLGEHVLATAEQYSWRFKENLWQSTLYWCTFSSKYGKTSGNVFFPEEGRWLSDKCKNHNCIWMSTMEGIKLKLGSVEAYDLRYPRSI

Homology

[Close]

BLAST of Sed0027955 vs. NCBI nr
Match: XP_023001658.1 (S-protein homolog 74-like [Cucurbita maxima])

HSP 1 Score: 163.3 bits (412), Expect = 1.5e-36
Identity = 75/139 (53.96%), Postives = 97/139 (69.78%), Query Frame = 0


Query: 3   CLIVLLAFVSNMNIK------TSSKIQPPLSKWQVTIINDMVTSTLAVHCKSKDDDLGEH 62
           C I+LL   SNM +K      T SK+Q P S+WQVTI N M+ STL VHCKSKD+DLG H
Sbjct: 8   CFILLLGLGSNMLMKPCFAQPTESKVQLPFSRWQVTIYNHMIDSTLMVHCKSKDNDLGRH 67

Query: 63  VLATAEQYSWRFKENLWQSTLYWCTFSSKYGKTSGNVFFPEEGRWLSDKCKNHNCIWMST 122
            +   + Y  +FKEN+WQ+T +WC FSSKYG+ +G+VF+PEEG  LSD+C +HNC+W + 
Sbjct: 68  EIKQGDNYFLKFKENIWQTTQFWCHFSSKYGQVTGDVFWPEEGSRLSDECNDHNCVWSAQ 127

Query: 123 MEGIKLKLGSVEAYDLRYP 136
             GI L  GS+ +Y L YP
Sbjct: 128 DGGIFLLRGSINSYQLAYP 146

[Close]

BLAST of Sed0027955 vs. NCBI nr
Match: XP_022954425.1 (S-protein homolog 74-like [Cucurbita moschata])

HSP 1 Score: 151.8 bits (382), Expect = 4.5e-33
Identity = 62/119 (52.10%), Postives = 86/119 (72.27%), Query Frame = 0


Query: 17  KTSSKIQPPLSKWQVTIINDMVTSTLAVHCKSKDDDLGEHVLATAEQYSWRFKENLWQST 76
           ++ S +    S W+V I+ND+  STL VHCKSKDDDLGEHV+   ++Y W+F EN+ Q+T
Sbjct: 9   QSDSSLIDQFSNWEVDIVNDLKDSTLVVHCKSKDDDLGEHVIKAGDKYFWKFHENVLQTT 68

Query: 77  LYWCTFSSKYGKTSGNVFFPEEGRWLSDKCKNHNCIWMSTMEGIKLKLGSVEAYDLRYP 136
           LYWC FSSK G+ SG VF+PE+  WLSD+C  + CIW++  +GI ++LG+   Y+L YP
Sbjct: 69  LYWCNFSSKRGQASGQVFWPEKSHWLSDRCNRNTCIWVAKDDGISIRLGAFGLYELVYP 127

[Close]

BLAST of Sed0027955 vs. NCBI nr
Match: XP_023542206.1 (S-protein homolog 74-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 149.1 bits (375), Expect = 2.9e-32
Identity = 59/109 (54.13%), Postives = 80/109 (73.39%), Query Frame = 0


Query: 27  SKWQVTIINDMVTSTLAVHCKSKDDDLGEHVLATAEQYSWRFKENLWQSTLYWCTFSSKY 86
           S W+V I+ND+  STL  HCKSK DDLGEHV+   ++Y W+F EN+WQ+TLYWC FSSK 
Sbjct: 51  SNWEVDIVNDLKDSTLVAHCKSKSDDLGEHVIKPGDKYYWKFHENVWQTTLYWCNFSSKR 110

Query: 87  GKTSGNVFFPEEGRWLSDKCKNHNCIWMSTMEGIKLKLGSVEAYDLRYP 136
           G+ SG VF+PE+  WLSD+C  + CIW++  +GI +++G    Y+L YP
Sbjct: 111 GQASGQVFWPEKSHWLSDRCNRNTCIWVAKDDGISIRIGVFGLYELVYP 159

[Close]

BLAST of Sed0027955 vs. NCBI nr
Match: XP_022954429.1 (S-protein homolog 74-like [Cucurbita moschata])

HSP 1 Score: 148.7 bits (374), Expect = 3.8e-32
Identity = 61/119 (51.26%), Postives = 84/119 (70.59%), Query Frame = 0


Query: 17  KTSSKIQPPLSKWQVTIINDMVTSTLAVHCKSKDDDLGEHVLATAEQYSWRFKENLWQST 76
           ++ S +    S W+V I+ND+  STL  HCKSKDDDLGEHV+   ++Y W+F EN+ Q+T
Sbjct: 9   QSDSSLIDQFSNWEVDIVNDLKDSTLVAHCKSKDDDLGEHVIKPGDKYFWKFHENVLQTT 68

Query: 77  LYWCTFSSKYGKTSGNVFFPEEGRWLSDKCKNHNCIWMSTMEGIKLKLGSVEAYDLRYP 136
           LYWC FSSK G+ SG VF+PE+  WLSD+C  + CIW++  +GI ++LG    Y+L YP
Sbjct: 69  LYWCNFSSKRGQASGQVFWPEKSHWLSDRCNRNTCIWVAKDDGISIRLGVFGLYELVYP 127

[Close]

BLAST of Sed0027955 vs. NCBI nr
Match: XP_022954427.1 (S-protein homolog 74-like [Cucurbita moschata])

HSP 1 Score: 146.0 bits (367), Expect = 2.4e-31
Identity = 60/119 (50.42%), Postives = 83/119 (69.75%), Query Frame = 0


Query: 17  KTSSKIQPPLSKWQVTIINDMVTSTLAVHCKSKDDDLGEHVLATAEQYSWRFKENLWQST 76
           ++ S +    S W+V I+ND+  STL  HCKSKDDDLGEHV+   ++Y W+F EN+ Q+T
Sbjct: 9   QSDSSLIDQFSNWEVDIVNDLKDSTLVAHCKSKDDDLGEHVIKPGDKYFWKFHENVLQTT 68

Query: 77  LYWCTFSSKYGKTSGNVFFPEEGRWLSDKCKNHNCIWMSTMEGIKLKLGSVEAYDLRYP 136
           LYWC FSSK G+  G VF+PE+  WLSD+C  + CIW++  +GI ++LG    Y+L YP
Sbjct: 69  LYWCNFSSKGGQAFGQVFWPEKSHWLSDRCNRNTCIWVAKDDGISIRLGVFGLYELVYP 127

[Close]

BLAST of Sed0027955 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 2.7e-17
Identity = 44/106 (41.51%), Postives = 63/106 (59.43%), Query Frame = 0


Query: 18  TSSKIQPPLSKWQVTIINDMVT-STLAVHCKSKDDDLGEHVLATAEQYSWRFKENLWQST 77
           T   I P +S+WQVT++N + T  TL +HCKSK+DDLGE  L    ++SW F EN+  ST
Sbjct: 30  TRDIIVPKISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHST 89

Query: 78  LYWCTFSSKYGKTSGNVFFPEEGRWLSDKCKNHNCIWMSTMEGIKL 123
            +WC  +   G  + NVF+ +    L  +C   NCIW +  +G+ L
Sbjct: 90  FFWCYMNKDNGHMNVNVFWDDV--ILFHRCGWKNCIWTAKTDGLYL 133

[Close]

BLAST of Sed0027955 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 6.7e-16
Identity = 41/106 (38.68%), Postives = 63/106 (59.43%), Query Frame = 0


Query: 18  TSSKIQPPLSKWQVTIINDMVT-STLAVHCKSKDDDLGEHVLATAEQYSWRFKENLWQST 77
           T   + P +S+WQVT+ N + T  TL +HCKSK++DLG+  L   +++SW F EN+  ST
Sbjct: 30  TRDIVVPKISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHST 89

Query: 78  LYWCTFSSKYGKTSGNVFFPEEGRWLSDKCKNHNCIWMSTMEGIKL 123
           L+WC  S   G  +  VF+ +    L  +C   NC+W +  +G+ L
Sbjct: 90  LFWCYMSKDDGHMNVKVFWDDV--ILFHRCDWKNCVWTAKNDGLYL 133

[Close]

BLAST of Sed0027955 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.7e-11
Identity = 39/112 (34.82%), Postives = 54/112 (48.21%), Query Frame = 0


Query: 25  PLSKWQVTIINDMVTS-TLAVHCKSKDDDLGEHVLATAEQYSWRFKENLWQSTLYWCTFS 84
           P SK  V I ND+    TL  HCKSKDDDLG   L   E +S+ F    +  TLY+C+FS
Sbjct: 44  PTSKRTVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFS 103

Query: 85  SKYGKTSGNVFFPEEGRWLSDKCKNHNCIWMSTMEGIKLKLGSVEAYDLRYP 136
                 S +++         +KC++  C+W     G        + +DL YP
Sbjct: 104 WPNESHSFDIYKDHRDSGGDNKCESDRCVWKIRRNGPCRFNDETKQFDLCYP 155

[Close]

BLAST of Sed0027955 vs. ExPASy Swiss-Prot
Match: P0DN92 (S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 8.5e-11
Identity = 40/91 (43.96%), Postives = 51/91 (56.04%), Query Frame = 0


Query: 30  QVTIINDMVTSTLAVHCKSKDDDLGEHVLATAEQYSWRFKENLWQSTLYWCTFSSKYGKT 89
           +VTI ND     L +HCKS+DDDLG H+LA  E + W+F  N   STLY+C FS   G+ 
Sbjct: 47  RVTIQNDN-DYLLGIHCKSRDDDLGFHILAKGELFGWKFHVNFCYSTLYFCGFSQ--GQM 106

Query: 90  SGNVFFPEEGRWLSDKCKNHNCIWMSTMEGI 121
              VF  E  R   D  +  NC W +  +GI
Sbjct: 107 KKGVF--EIYRANRDFYRCANCTWKAEKDGI 132

[Close]

BLAST of Sed0027955 vs. ExPASy Swiss-Prot
Match: Q9FI84 (S-protein homolog 27 OS=Arabidopsis thaliana OX=3702 GN=SPH27 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 9.4e-10
Identity = 41/124 (33.06%), Postives = 62/124 (50.00%), Query Frame = 0


Query: 1   MFCLIVLLAFVSNMNIKTSS----KIQPPLSKWQVTIINDMVTSTLAVHCKSKDDDLGEH 60
           MF + +++ FV+             I+ PL++  V   ND +   L +HCKSKDDDLG H
Sbjct: 17  MFTICIVMIFVTCYETFQQDGEPFPIRGPLTRITVKNNNDYL---LGIHCKSKDDDLGFH 76

Query: 61  VLATAEQYSWRFKENLWQSTLYWCTFSSKYGKTSGNVFFPEEGRWLSDKCKNHNCIWMST 120
           +    E Y W+F  N   STLY+C FS   G+ +  VF  +       +C+  NC W + 
Sbjct: 77  IHKEGELYGWKFHVNFQNSTLYFCGFSQ--GQDNKGVFDIDRAERDFYRCR--NCTWNAK 133

[Close]

BLAST of Sed0027955 vs. ExPASy TrEMBL
Match: A0A6J1KR58 (S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111495733 PE=3 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 7.2e-37
Identity = 75/139 (53.96%), Postives = 97/139 (69.78%), Query Frame = 0


Query: 3   CLIVLLAFVSNMNIK------TSSKIQPPLSKWQVTIINDMVTSTLAVHCKSKDDDLGEH 62
           C I+LL   SNM +K      T SK+Q P S+WQVTI N M+ STL VHCKSKD+DLG H
Sbjct: 8   CFILLLGLGSNMLMKPCFAQPTESKVQLPFSRWQVTIYNHMIDSTLMVHCKSKDNDLGRH 67

Query: 63  VLATAEQYSWRFKENLWQSTLYWCTFSSKYGKTSGNVFFPEEGRWLSDKCKNHNCIWMST 122
            +   + Y  +FKEN+WQ+T +WC FSSKYG+ +G+VF+PEEG  LSD+C +HNC+W + 
Sbjct: 68  EIKQGDNYFLKFKENIWQTTQFWCHFSSKYGQVTGDVFWPEEGSRLSDECNDHNCVWSAQ 127

Query: 123 MEGIKLKLGSVEAYDLRYP 136
             GI L  GS+ +Y L YP
Sbjct: 128 DGGIFLLRGSINSYQLAYP 146

[Close]

BLAST of Sed0027955 vs. ExPASy TrEMBL
Match: A0A6J1GSD6 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111456683 PE=3 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 2.2e-33
Identity = 62/119 (52.10%), Postives = 86/119 (72.27%), Query Frame = 0


Query: 17  KTSSKIQPPLSKWQVTIINDMVTSTLAVHCKSKDDDLGEHVLATAEQYSWRFKENLWQST 76
           ++ S +    S W+V I+ND+  STL VHCKSKDDDLGEHV+   ++Y W+F EN+ Q+T
Sbjct: 9   QSDSSLIDQFSNWEVDIVNDLKDSTLVVHCKSKDDDLGEHVIKAGDKYFWKFHENVLQTT 68

Query: 77  LYWCTFSSKYGKTSGNVFFPEEGRWLSDKCKNHNCIWMSTMEGIKLKLGSVEAYDLRYP 136
           LYWC FSSK G+ SG VF+PE+  WLSD+C  + CIW++  +GI ++LG+   Y+L YP
Sbjct: 69  LYWCNFSSKRGQASGQVFWPEKSHWLSDRCNRNTCIWVAKDDGISIRLGAFGLYELVYP 127

[Close]

BLAST of Sed0027955 vs. ExPASy TrEMBL
Match: A0A6J1GSZ3 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111456688 PE=3 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.8e-32
Identity = 61/119 (51.26%), Postives = 84/119 (70.59%), Query Frame = 0


Query: 17  KTSSKIQPPLSKWQVTIINDMVTSTLAVHCKSKDDDLGEHVLATAEQYSWRFKENLWQST 76
           ++ S +    S W+V I+ND+  STL  HCKSKDDDLGEHV+   ++Y W+F EN+ Q+T
Sbjct: 9   QSDSSLIDQFSNWEVDIVNDLKDSTLVAHCKSKDDDLGEHVIKPGDKYFWKFHENVLQTT 68

Query: 77  LYWCTFSSKYGKTSGNVFFPEEGRWLSDKCKNHNCIWMSTMEGIKLKLGSVEAYDLRYP 136
           LYWC FSSK G+ SG VF+PE+  WLSD+C  + CIW++  +GI ++LG    Y+L YP
Sbjct: 69  LYWCNFSSKRGQASGQVFWPEKSHWLSDRCNRNTCIWVAKDDGISIRLGVFGLYELVYP 127

[Close]

BLAST of Sed0027955 vs. ExPASy TrEMBL
Match: A0A6J1GQZ0 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111456686 PE=3 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 1.2e-31
Identity = 60/119 (50.42%), Postives = 83/119 (69.75%), Query Frame = 0


Query: 17  KTSSKIQPPLSKWQVTIINDMVTSTLAVHCKSKDDDLGEHVLATAEQYSWRFKENLWQST 76
           ++ S +    S W+V I+ND+  STL  HCKSKDDDLGEHV+   ++Y W+F EN+ Q+T
Sbjct: 9   QSDSSLIDQFSNWEVDIVNDLKDSTLVAHCKSKDDDLGEHVIKPGDKYFWKFHENVLQTT 68

Query: 77  LYWCTFSSKYGKTSGNVFFPEEGRWLSDKCKNHNCIWMSTMEGIKLKLGSVEAYDLRYP 136
           LYWC FSSK G+  G VF+PE+  WLSD+C  + CIW++  +GI ++LG    Y+L YP
Sbjct: 69  LYWCNFSSKGGQAFGQVFWPEKSHWLSDRCNRNTCIWVAKDDGISIRLGVFGLYELVYP 127

[Close]

BLAST of Sed0027955 vs. ExPASy TrEMBL
Match: A0A1S3C8Z6 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103498000 PE=3 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.9e-29
Identity = 66/136 (48.53%), Postives = 88/136 (64.71%), Query Frame = 0


Query: 4   LIVLLAF---VSNMNIKTSSKIQPPLSKWQVTIINDMVTSTLAVHCKSKDDDLGEHVLAT 63
           LI++LAF   V        SK Q PL+ WQVTIIN  + ++L VHCKSKDDDLG HV+  
Sbjct: 10  LILVLAFAWKVDQCYCGGDSKYQLPLTDWQVTIINYQINASLEVHCKSKDDDLGVHVIQN 69

Query: 64  -AEQYSWRFKENLWQSTLYWCTFSSKYGKTSGNVFFPEEGRWLSDKCKNHNCIWMSTMEG 123
             E+YSW FKEN  Q+T +WC F S+ G  S  VF+PE G WLSD+C N NC+W+++ +G
Sbjct: 70  EGERYSWGFKENWLQTTKFWCNFQSRLGHASFEVFWPETGTWLSDRCSNSNCVWVASNDG 129

Query: 124 IKLKLGSVEAYDLRYP 136
             L  G  +  + ++P
Sbjct: 130 FSLLNGPAKTLEFQHP 145

[Close]

BLAST of Sed0027955 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 )

HSP 1 Score: 89.7 bits (221), Expect = 1.9e-18
Identity = 44/106 (41.51%), Postives = 63/106 (59.43%), Query Frame = 0


Query: 18  TSSKIQPPLSKWQVTIINDMVT-STLAVHCKSKDDDLGEHVLATAEQYSWRFKENLWQST 77
           T   I P +S+WQVT++N + T  TL +HCKSK+DDLGE  L    ++SW F EN+  ST
Sbjct: 30  TRDIIVPKISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHST 89

Query: 78  LYWCTFSSKYGKTSGNVFFPEEGRWLSDKCKNHNCIWMSTMEGIKL 123
            +WC  +   G  + NVF+ +    L  +C   NCIW +  +G+ L
Sbjct: 90  FFWCYMNKDNGHMNVNVFWDDV--ILFHRCGWKNCIWTAKTDGLYL 133

[Close]

BLAST of Sed0027955 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 85.1 bits (209), Expect = 4.8e-17
Identity = 41/106 (38.68%), Postives = 63/106 (59.43%), Query Frame = 0


Query: 18  TSSKIQPPLSKWQVTIINDMVT-STLAVHCKSKDDDLGEHVLATAEQYSWRFKENLWQST 77
           T   + P +S+WQVT+ N + T  TL +HCKSK++DLG+  L   +++SW F EN+  ST
Sbjct: 30  TRDIVVPKISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHST 89

Query: 78  LYWCTFSSKYGKTSGNVFFPEEGRWLSDKCKNHNCIWMSTMEGIKL 123
           L+WC  S   G  +  VF+ +    L  +C   NC+W +  +G+ L
Sbjct: 90  LFWCYMSKDDGHMNVKVFWDDV--ILFHRCDWKNCVWTAKNDGLYL 133

[Close]

BLAST of Sed0027955 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 70.5 bits (171), Expect = 1.2e-12
Identity = 39/112 (34.82%), Postives = 54/112 (48.21%), Query Frame = 0


Query: 25  PLSKWQVTIINDMVTS-TLAVHCKSKDDDLGEHVLATAEQYSWRFKENLWQSTLYWCTFS 84
           P SK  V I ND+    TL  HCKSKDDDLG   L   E +S+ F    +  TLY+C+FS
Sbjct: 44  PTSKRTVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFS 103

Query: 85  SKYGKTSGNVFFPEEGRWLSDKCKNHNCIWMSTMEGIKLKLGSVEAYDLRYP 136
                 S +++         +KC++  C+W     G        + +DL YP
Sbjct: 104 WPNESHSFDIYKDHRDSGGDNKCESDRCVWKIRRNGPCRFNDETKQFDLCYP 155

[Close]

BLAST of Sed0027955 vs. TAIR 10
Match: AT5G06020.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 64.7 bits (156), Expect = 6.7e-11
Identity = 41/124 (33.06%), Postives = 62/124 (50.00%), Query Frame = 0


Query: 1   MFCLIVLLAFVSNMNIKTSS----KIQPPLSKWQVTIINDMVTSTLAVHCKSKDDDLGEH 60
           MF + +++ FV+             I+ PL++  V   ND +   L +HCKSKDDDLG H
Sbjct: 17  MFTICIVMIFVTCYETFQQDGEPFPIRGPLTRITVKNNNDYL---LGIHCKSKDDDLGFH 76

Query: 61  VLATAEQYSWRFKENLWQSTLYWCTFSSKYGKTSGNVFFPEEGRWLSDKCKNHNCIWMST 120
           +    E Y W+F  N   STLY+C FS   G+ +  VF  +       +C+  NC W + 
Sbjct: 77  IHKEGELYGWKFHVNFQNSTLYFCGFSQ--GQDNKGVFDIDRAERDFYRCR--NCTWNAK 133

[Close]

BLAST of Sed0027955 vs. TAIR 10
Match: AT1G04645.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 63.9 bits (154), Expect = 1.1e-10
Identity = 30/87 (34.48%), Postives = 52/87 (59.77%), Query Frame = 0


Query: 24  PPLSKWQVTII---NDMVTSTLAVHCKSKDDDLGEHVLATAEQYSWRFKENLWQSTLYWC 83
           PP   W+ T++   N +    L +HCKSK DDLG HV+   ++Y ++F+ NLW+STL++C
Sbjct: 23  PPF--WRATVVTMTNLIGGPPLTIHCKSKQDDLGIHVVPFKQEYHFKFQPNLWKSTLFFC 82

Query: 84  TFSSKYGKTSGNVFFPEEGRWLSDKCK 108
           +F       S +++  +  + + D C+
Sbjct: 83  SFQWDSQFKSFDIYDAQRDQGICDDCQ 107

The following BLAST results are available for this feature:

BLAST of Sed0027955 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023001658.1	1.5e-36	53.96	S-protein homolog 74-like [Cucurbita maxima]	[more]
XP_022954425.1	4.5e-33	52.10	S-protein homolog 74-like [Cucurbita moschata]	[more]
XP_023542206.1	2.9e-32	54.13	S-protein homolog 74-like [Cucurbita pepo subsp. pepo]	[more]
XP_022954429.1	3.8e-32	51.26	S-protein homolog 74-like [Cucurbita moschata]	[more]
XP_022954427.1	2.4e-31	50.42	S-protein homolog 74-like [Cucurbita moschata]	[more]

BLAST of Sed0027955 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JLS0	2.7e-17	41.51	S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1	[more]
Q2HQ46	6.7e-16	38.68	S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1	[more]
F4JLQ5	1.7e-11	34.82	S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1	[more]
P0DN92	8.5e-11	43.96	S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1	[more]
Q9FI84	9.4e-10	33.06	S-protein homolog 27 OS=Arabidopsis thaliana OX=3702 GN=SPH27 PE=2 SV=1	[more]

BLAST of Sed0027955 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KR58	7.2e-37	53.96	S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111495733 PE=3 SV=1	[more]
A0A6J1GSD6	2.2e-33	52.10	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111456683 PE=3 SV=1	[more]
A0A6J1GSZ3	1.8e-32	51.26	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111456688 PE=3 SV=1	[more]
A0A6J1GQZ0	1.2e-31	50.42	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111456686 PE=3 SV=1	[more]
A0A1S3C8Z6	1.9e-29	48.53	S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103498000 PE=3 SV=1	[more]

BLAST of Sed0027955 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16295.1	1.9e-18	41.51	S-protein homologue 1	[more]
AT4G29035.1	4.8e-17	38.68	Plant self-incompatibility protein S1 family	[more]
AT4G16195.1	1.2e-12	34.82	Plant self-incompatibility protein S1 family	[more]
AT5G06020.1	6.7e-11	33.06	Plant self-incompatibility protein S1 family	[more]
AT1G04645.1	1.1e-10	34.48	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 30..121 e-value: 6.3E-21 score: 74.9
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 19..122
None	No IPR available	PANTHER	PTHR31232:SF34	PUTATIVE-RELATED	coord: 19..122

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0027955.1	Sed0027955.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process