
Sed0027949 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAACTCTCCTCGCCGGCGACGACGACCTCTCATCTTCTCCGACGATCTCACTGGGAGCTTTAATTTTCGGCAAAGGCCCCCGTCGCCGTCTTTCAGTCTCTTCGCCTGAGATCCCACCGACCAAAGCTTCTTGCTTCTTCTCCAGCAGATTGGAGACGGAATCCGCCGTCCAACGCCGACTACCACCGCCCAGCCCCTCTCCACTCTACAAGCAGCTCTCCTGGTCGCCGGACATCGACCGTGAGGAGGCCTGGCTCCGCCGCAAAACCAAAAACAAGATCCGCCGGAGCAAGAGCGTCACCGACGACGACCTTGAATTGGGTTTTGGGCTCAACTTGCCGGAGGTTGACCCATGACTTTGTGAAACTTTTTTCCGGCGTTGGGATTTTACCACGCCGTCAATAACCACTATAATTGCTCTCTTTCGGCCTCGTCGGCGTCTCTCTGTTCTTCCCCTGTTTCCGGCTCTGTTTCTAACAGCCCCTCCGCTATAATTAGCCACGGTAGGATACTGGATTGTTAAAATTGTAGGAATCTTATTGGGTTTTCTGATGGAAATTTTGAACTGGGTTTTGCAGGGGAGAATACGGAGACGGTGAAAGCAAGGCTGAAACAATGGTCGCAAGCGGTTGCTTGTTCAGTACGGCAGTATTGA ATGAACTCTCCTCGCCGGCGACGACGACCTCTCATCTTCTCCGACGATCTCACTGGGAGCTTTAATTTTCGGCAAAGGCCCCCGTCGCCGTCTTTCAATTGGAGACGGAATCCGCCGTCCAACGCCGACTACCACCGCCCAGCCCCTCTCCACTCTACAAGCAGCTCTCCTGGTCGCCGGACATCGACCGTGAGGAGGCCTGGCTCCGCCGCAAAACCAAAAACAAGATCCGCCGGAGCAAGAGCGTCACCGACGACGACCTTGAATTGGGTTTTGGGCTCAACTTGCCGGAGCCCCTCCGCTATAATTAGCCACGGGGAGAATACGGAGACGGTGAAAGCAAGGCTGAAACAATGGTCGCAAGCGGTTGCTTGTTCAGTACGGCAGTATTGA ATGAACTCTCCTCGCCGGCGACGACGACCTCTCATCTTCTCCGACGATCTCACTGGGAGCTTTAATTTTCGGCAAAGGCCCCCGTCGCCGTCTTTCAATTGGAGACGGAATCCGCCGTCCAACGCCGACTACCACCGCCCAGCCCCTCTCCACTCTACAAGCAGCTCTCCTGGTCGCCGGACATCGACCGTGAGGAGGCCTGGCTCCGCCGCAAAACCAAAAACAAGATCCGCCGGAGCAAGAGCGTCACCGACGACGACCTTGAATTGGGTTTTGGGCTCAACTTGCCGGAGCCCCTCCGCTATAATTAGCCACGGGGAGAATACGGAGACGGTGAAAGCAAGGCTGAAACAATGGTCGCAAGCGGTTGCTTGTTCAGTACGGCAGTATTGA MNSPRRRRRPLIFSDDLTGSFNFRQRPPSPSFNWRRNPPSNADYHRPAPLHSTSSSPGRRTSTVRRPGSAAKPKTRSAGARASPTTTLNWVLGSTCRSPSAIISHGENTETVKARLKQWSQAVACSVRQY Homology
BLAST of Sed0027949 vs. NCBI nr
Match: XP_022962884.1 (uncharacterized protein LOC111463251 [Cucurbita moschata] >KAG6595037.1 hypothetical protein SDJN03_11590, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 62.4 bits (150), Expect = 3.3e-06 Identity = 28/33 (84.85%), Postives = 31/33 (93.94%), Query Frame = 0
BLAST of Sed0027949 vs. NCBI nr
Match: XP_022133086.1 (uncharacterized protein LOC111005768 [Momordica charantia]) HSP 1 Score: 62.4 bits (150), Expect = 3.3e-06 Identity = 28/33 (84.85%), Postives = 31/33 (93.94%), Query Frame = 0
BLAST of Sed0027949 vs. NCBI nr
Match: XP_023518715.1 (uncharacterized protein LOC111782145 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 62.4 bits (150), Expect = 3.3e-06 Identity = 28/33 (84.85%), Postives = 31/33 (93.94%), Query Frame = 0
BLAST of Sed0027949 vs. NCBI nr
Match: XP_023003217.1 (uncharacterized protein LOC111496895 [Cucurbita maxima]) HSP 1 Score: 62.4 bits (150), Expect = 3.3e-06 Identity = 28/33 (84.85%), Postives = 31/33 (93.94%), Query Frame = 0
BLAST of Sed0027949 vs. NCBI nr
Match: XP_038881139.1 (uncharacterized protein LOC120072737 [Benincasa hispida]) HSP 1 Score: 60.1 bits (144), Expect = 1.7e-05 Identity = 33/54 (61.11%), Postives = 41/54 (75.93%), Query Frame = 0
BLAST of Sed0027949 vs. ExPASy TrEMBL
Match: A0A6J1KLU9 (uncharacterized protein LOC111496895 OS=Cucurbita maxima OX=3661 GN=LOC111496895 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 1.6e-06 Identity = 28/33 (84.85%), Postives = 31/33 (93.94%), Query Frame = 0
BLAST of Sed0027949 vs. ExPASy TrEMBL
Match: A0A6J1BU15 (uncharacterized protein LOC111005768 OS=Momordica charantia OX=3673 GN=LOC111005768 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 1.6e-06 Identity = 28/33 (84.85%), Postives = 31/33 (93.94%), Query Frame = 0
BLAST of Sed0027949 vs. ExPASy TrEMBL
Match: A0A6J1HIC1 (uncharacterized protein LOC111463251 OS=Cucurbita moschata OX=3662 GN=LOC111463251 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 1.6e-06 Identity = 28/33 (84.85%), Postives = 31/33 (93.94%), Query Frame = 0
BLAST of Sed0027949 vs. ExPASy TrEMBL
Match: A0A6J1IVC7 (uncharacterized protein LOC111478729 OS=Cucurbita maxima OX=3661 GN=LOC111478729 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 3.1e-05 Identity = 27/33 (81.82%), Postives = 30/33 (90.91%), Query Frame = 0
BLAST of Sed0027949 vs. ExPASy TrEMBL
Match: A0A5D3CRC3 (Membrane insertase YidC OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G004830 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 3.1e-05 Identity = 33/54 (61.11%), Postives = 39/54 (72.22%), Query Frame = 0
BLAST of Sed0027949 vs. TAIR 10
Match: AT4G33985.1 (Protein of unknown function (DUF1685) ) HSP 1 Score: 47.4 bits (111), Expect = 1.0e-05 Identity = 23/53 (43.40%), Postives = 36/53 (67.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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