Sed0027904 (gene) Chayote v1

Overview
NameSed0027904
Typegene
OrganismSechium edule (Chayote v1)
DescriptionIGR domain-containing protein
LocationLG04: 2992654 .. 3005262 (+)
RNA-Seq ExpressionSed0027904
SyntenySed0027904
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCAAGAGTGCATTGTGGACATACATCGACTTGTCACTACCGTGCTTCGTCATCGCCAAAGCCCTACATGAAAGAGCCTTCAAAGGCCTTGCAAGCTTGAGAAAGTAGACATAGTGAAGGCATTGGGCTCAATATCACTGCTTATCATCTCACAACCAATAACTATGGGCGTCCAGGCAACCGCATCTCATTCAGGCATTTCATCGCGTCTATGGTTACGCCTTTGTCAAAGTATAATTTGATGAGATTTTACGGCTAAAATGGATGGCCCACGTTCCAGTTGGGTTGAGTTTTCAACTAAATTCAGATATTTTTTCAAGTTGGGTTGAATTTTCAAGTTGTGTTAATATTTTTTCCTTTTTAATATTCAATCACAAAAAAGTGTGATTTTATACTTAAACTACATATCTTGTTAATATATTCATAACAAATAAATTAAAAATCTATTTTATTAATTCATTTTACACATATATGATATTATTTTTAGTTTGAATTGAAATTAAATGAGTTAAAAATTGGTCGAGTCAACAACTAACAAACCCAACAAAAAATGATAAAATCATAACTCAATTTAACTGAAAAAAAAAATTATAACTCAATTGAAACTTTATATGTTCCCAAGAAGCAGCCCAACGGTTGAGGTTAAGAACTTGAAGACATGCTTCTTTGAGAGATACCTGGTTTGAGACTGTTGGAAAGCGCTTAAACTAGAATATCGTTCGAAGTATCCCGTGACACCGTCTAGGGACGGACTAGTAGTACTCTGGGTATAGAGGGAGCAAAACTCTAATTTCTTGATTTTAAAAAAAAATTGAACTTGAATAAGGTAGTTTGAGTTGCTCTGATGGTGGATTATTTAGGATTTTGCATATATAACAAAAAAACAAAATATTTCTATCTATAGCACAAAATTAAAATTAATTCATTTTTAATAGAAAAATTCAAATTGAGTTCTATTATTGATTGTATTCTATTAGTGATAGAATTCAATCAATGATAGACTCATTCTATTACTGTTTTACAAATATAATATAACACGTAAATATGTTGTTGATGGTAAATTTTGTGGATTATTTTGTAGACAGTAAATAAATAAAATTAAAAAAAAAACCCTACGTCCGTGCAATCCGTTCTCGTATTGTTTCTCTCCTTCTTCCATCTTTGCCTCTCGCCGGAACGCAGTCCACCGTCTTCTGCTGCAATCTCTCGCTGCCGCGCCATCCACCGTCGTCTACCACAGTCGCTTCAAATCTCATTCGATCGCCGTCGAGGTCTGTTCTTTCTTACGATTCATACATACAACTCCTAAATGCGCTACATTTCTTTCTAATCACTTCAATTTTGAGTTCGTAATCATCCCAATCTCACCTGTTCATGTTCTGAAACTGAAATTTTTTCGTTCTAAGCATGATTTTAAGCCATACTGTAGTGATTCATTGATCCAGCTGATCAGATTGCCTTGCCCTCGCTTCTCATTCTATTTATCAATCGATTTCTCCACTCTATCGTTTATTTATTTATTATTATTATTTAAAATTTTGGATTCCATTGTGGTGTGGTAAGCTCAAGCTGGTTGATATTTTCATCTTTCTCGACTATCAAATTCTACTTTCTGGTGTGGTGTGGTGGTTGATCCTTCCATTATGTGGTTACGGCTACAAATTTTGTTGTGCTTCTTTTGTTTCAACTTAATCACTGTTTTTGTTAATGGTATATTTCCGTGTTGCCAAAAATTACGGTTCCATTTGATAACCATTTGATTTTTTGTTTTTGGTTTTTGAAATTTAAGGCTATTTTAATCCAAATTTCCACAACAAATGTATCCAACTTTCCTTGAGAAAGTAGATGAATGACAACGAAATTTCAAAAACAAAAACAATTTTTTGAAAGATACCTTTTTTTCTCCCCAAAATTTGGTTTGGTTTCTTAAAATATAGATAAGATATAGATATCCAAGTAAGAAAAAACCTATGCTAAAATGGTTGTTGTTGGCTTAAATTTCAAAAACCAATAACTAAAAACAAAATAGTTACCAAACGGGGCTTAAACTACTAATTTGTTCAATTGGGGAAGCATTTGCAGATTTGAGCTGTACTTCTGTCCATTCTGTCACTCATATTTCTGTTGGGAAAAAAAGAGAACGCTGGATTAGAATATTTCAATATTTTGAGCAGAAATGAATAAACAATCGAAAATTGAATGAAAGATTGTTTTTGTACAAAACTCCAGAATCTCAATAACACATATACAATGGTTGATTTGAACAAAAATATTTAAGGGTGGCAAAAAACATTTATGGTTGAATTTTATTTGTGCCTTCTTTTGGGAAATGGTGGTTGGAAAGAAACAATAGAACATTCAATAACTCCCACCTATCCTATTTTGATCTACTAGAAGTCTAGAATTGGTTACTTCTGCTCTATATTGGAGTCGTCGTCTCCCTCATTTCCTGCAGTTAAAATTCTATACTTAATACCTTCCTAGAAAATTTGCAGATGATTTGAGACTCATGGGTTTGTTGTTCACAGCAAAAAGGATGGCGTGGAGGCAGATTATCTCCAACCATAGGTCTATACTGCAACCATACTCGGCTCCTCTATTTGCTAGATTCTTTTCTAAATCTATCCCGTATGTCGGTAAGTGTTTTCTTTACAGTCTTAATTTCTATAAGATCTTATTTTCATCTTGATCCAAGAATTGAGCCTTATGCTCGATTAGGTTTTTGGAATATGGAAAATATAATGACTTAGTTCTGTCAGCCAAAGGAGTGAAGGAATGTATAGTTTACTGAACAGACTCGGAAATGGACCTTATTTTGTATCTCTTCGTTGAAAGAATTTTTTACCCAAACAGAAGCCAGGACGTGATTCACTGTCTATTAAAAGGAAGCGGGTGAAAGTAAACGATCTGAGATTTCAGAAAGTTGAAAATACTACAATTACTTAACTTTCTTTATGCATGCCATTCTTGATCTTCCCACTAGTATTGATATCTTTTTATGCTGCTTGTTTGTCAACATTTGTTTGCTATGATTTCCTGTGAGTCTGTGAACAGTATTAAGTGTCTGAATTTAGAGTCATTAAGATGATTTGTGTGCGCTTGATTTTTTGTCATTTATGTTTTAGTAAAGGTCGGAATACCAGAATTTTTAAATGGTGTTGGGCATGGGGTTGAGTCACATGTGGCTAAACTTGAGTCAGAGATTGGTGACTTCCAGAAGCTGCTTGTTACTCGCACGCTTAAGCTGAAAAAACTTGGAATACCTATCAAACATGTAAGTATTTTTTCAACCTTATTTTTATTTTTATCTTTATTTTTGCAAGGACACCAGTCAAATACTTCGACTTCAACCTTCAATCTGCAAACATATGGTTACATTCATGGATTTCATTATGTAAATGATATGGATTATAGCAAGACTAAGACATGTTTGATCGCCAAAACAACTACCCATATTCTTTCTATTACTGTATTATTACCCACATTTGATACGCTTCCTGGAGGTAACAACTCTAGAGTTTGCAATGCTATCTTTATTTGCTCTGGATCAGCTCTCTAGGTCCTTCTTTTGGTGCTAGCTACTTTTTCTATGGCCAGTCTAGTTATAAATTAAAGGGAAAACTACCTTTTGGTCGCTTAACTCTGGGTTAGATTTCATTTTTTTTTTTGAAACAGGCAACAAGCTTTTCATTAAGAAAATGAAAAGAGGCAAAGCTCTTTAGAAACAATGCATCAAGAGATAATGAAATAAAAAACATCCAAAACAGGGACAAAAACTAGGAAAGGAAAAGAACCACAAGCAGATACATTAAGACAAGTAAAAGAAAAATGAGAGGCTTAAAGCTAGGAAGCCACTAGAGAAACGCTCCCCACAAAATCCTTGGACAGAGCACACCATGAAGAAGCATTTAATCTTGAGATCCCAAATCTGGCAAACCATGGAAGCTGAACATCTTGAAAAATCCTCTGGTTTCTTTCCCACCAAAGTTCATAAACCAAAGCTTTAACAGCATTAACCCAAAGAAGACGACCCTTCCTGGCTAGACGTGGCCCAACAAGAAGACTGAAAATTTACTCTGAAATCATTAGAAAAGACCCAAGCTACATTGAAGAATGCAAACAGCTTGTCCCAACAGGAGGCTGAAAATCTGCATTGAAATAAAAGGTGGCAGGAAAATTCTGATGATGCCCAACAGAGAAGGCAAATAGAGGGCATCAAAAAATTCTTGGGCATCTTTCATTGAAGAACTTCGGATGTGTTGATACAGCCATTAAGAATAATCCACGAAAAGATACTAACTCTCATAGGGCATTTAGATTTCCAAATACTTTTGAAAACATGTGAGGGGATAGCTGCAATCTGATCAGAAGCTTTAACAAGGGATTTCACAGAGAAAACACCACTTTTCTCAAGTGACCAAATTTTCACATCTTTCCTTGTCAAAGAGGGAGACAAAGGAGATAAGGTGAACATTAATCTCTCAAAGTCAGATGTCTCATCATCAAATAATAGCCTCCTGAAAGAGAAGCTCTATGAAGAAAGGGAGGAATCCCAAAAATCTGCAACTGAACCATCTTTGGAAGTATAAACCAAAAACAGCCTAGGAAAAGCTTCCTTTAAAGGAGATTCTAAGGCCCATTTATCCAACCAAAAGGAAATACGACAACCATTTCCCAACTTTAGAACAGAAAAATGTTCAAATTTCTTCCAACACTTAAAAATAGAAAGCCAAGGACTCCGCAAGCTAGAATGAAATTTTCCAGTTGTACACCATCCGAAGGAAGACAAACCATGGATGCTAGACTAGAAATAATCTTGCGCCATAAGGCCTCAGTTCATGATTAGATCTCCAACCCCACTTAGCAAGCAATGCTTCATTTTTTAGCTTTATCGCGCCAATACCAAGACCACCAGACCTTTTATCACAAGTTAAAGATTTCCAATTAACCAAATGATTTAACGAACTACCCTATGTTCCATCCCAGAAAAAATCTCTAAGCAACCTCTCAAATATGAGACAACAAGAGGAGGGCATAATGAATAAGGACATGTAATAAATTGGCAAATTGGACAAAACCGAATTGCACAAAGTTAATCTACCACCACGAGACAGAGAATATTTCTTCCATCTTTCAAGTTTCTTTGACCTTGTCAATAATTGGCTGCCAGAAAGAAATATCTTTAGGATGACCACCTAAAGGAAGACCAAGGTATATGATTGGAAGCTTTTCAATCTTGCAATTGAGTCTTGTAGCTAAACGAGACACTTTATCTTCATCAATATTCAGACCGCATAAAGCTGACTTCTCCCACTTAATCTTTAAGCCAGAGCACCATTCGAAAAGACCAATAATGTTTACCAAGGCATCAATCATATTGTCATCATCTTTACAAAAAATCAAGGTGTCATCAGCAAATTGCAATTTAAACACTTCACCCTGATTTTTAGATCCAAATTGTTGAGTATGAAAACTCAGAGATCCAAATGAAATCAAGGTGAAGTGTTTCATACTCAACAACTTAGTCCCTGAGTTTTGGATTTAATTATATTGATGAGACACCTATGTTTTTTTTAAAAAAATATTTTTCTAAATTTTAGTTGAAATTAAAACACTTCAGCATTCCGTTAGTTATTAACGAAAAATTAGAAATCATGGAGTGACCTAGTGGTCAAGAGGGCATTTTGGGAACTATGAGGTGATGAGTTCAAACTTCAATCTATAGTAGCCACCTACCTAGGAATTAATTTTTTACTAGTTTTCTTGACATCCAAATGTTGTATGGTCAGACGGTATGTCCCGTAACAATAGTTGAGGTGCGCATAAGCTGATCCAATTAGTCACATTACATATATAAAAAAGAAAACCATCCTAGATTTGATGGACCAAAAAGGTATTTTTGTCTTCACGATGCCTTTCATTATTTCTAACAAACTATTGTTGAGTAGGGCCAGGTCTATTATTATTATTATTGTTATTATTATTTTATGATATACTATTAAATGATCGAATCCAAAATATTTTAGCCTTTTTCACGAACTATGAAAATATTGATAACAAAGATGAACTTAAAATTCAACTAGCATTTGAACATAGGTAGTTGTATTAATCCATCTAAGTCCCATAAAGACCAAACCTCACCATTCTTCAAATGCCCACTAAAAACCCACGAAACAAAATTATAAGCCTAAATTTAATAATCTCAAAATATTTTTGTTTTTACCTCATTTTCCTCTTTCCATTCTATTTTTCTTTCTTTCCCTTTTCCATTTTTGTCCATATACCTTCAATGGACATCGTCGTTGACTCCCTCCACCAACACTACCTTGTTGTCGTGCCATTGACCTCTTGAAACAAATAAGTTTCGAATGATGTGTCCGTGAAGTGTCCATGGTGTGTTCGTGAAGTGTCCAAAATTATAAATAATAATAATAAAGGAGCTCCCTCAAAGTCTCAGGTTTGAGACTTGTCTGTAACATTAATTTGTAGACACCTCTTGAGTTTCCATTCCTTCAATGTCTCTCTGTGTCCGTCGTAGGGACGGATGTGGTTACCTTGGGCAGTGTTTTAAAAAGCGCAAGGCGCAAAGACCCTCTGGAGCCTGAGGCGCAAGGCGCACCTTAAGGCGAGAGCTTTTTTACTTAAGGTGCACTATATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATGTGTGTGTGTGTGTGTGGTTTATATGCCCAATAAAAGGAGTTTCATAGCAATAAAAGGTTCAAATTCAAACATATATGATATAATAATATATAAATAACTGAAGTCAAATTTCAATACATGATGCTTTAAGATTCAAAACAACCTAAAAGATGCAACCAAAACTACAAAAGTAAAGCATAAGAATCTAAAGTCCTAAAGATCAAAATCCTCATCTTCATCATCACTAAATATCTCATCACCCTCGACCTCTACATCATTAGATTTATAAGCACTTGCATCTTCTTCTTCATCAGTGTCGGTATCCAAATCATGCAAAGCTAGTGGTATAGGTGCGGGTCGTGCTCGTGGTGGACATGAGACTCGAGATCGTGATATTGGTTGTGTTTGTGTGGATGACGAACAAGGTGTTTTATCCTTGTTTTTCGACGTGGCTCTAGAATAATAAGCAGGTTCTTTTGAACCAGATGCTCTTGAAACATCACCTCATGTTAGTGCGTCATCATCGTCGTTAAATACAAGATCTCTATCATCGTCAGTATCATCATCCAATCTTCCCACCAACCACTCGTTACTCTCATCAATAACCTTTAAAGAGATGGGGTCTGCAACGTCTTTAATATTAAATCGACGTTTCAATGTCTGTTGTATTTTATGAACACCAAATCATTGAGACGACGTTGATCAAGTCTATTCCTCCTTTTGCTATGAAGCTGCAAAATTAAAGAACCATGACAATTCAATATTTTAAACCTTAAACAAGTTACTCTAGGAGTGGTGAATTTAATTAACTATCTAACCTATTAAAAAACACTCCAATTGCGCTCGCATCCAGAAGAACTACAGGTAAGACCTAAAACTCTTATTGCGAACTTTTGCAAGTTGGGACTTGATTTGCCAAAATCATCCCACCATTCCACTACGTAGATTAAGATTAAAAATGATGTTAATAGCTTTCTAACCATAAAATACTTGTATTCAAGTTTAGAATTTACCTGGAGATCTTTTGTTTCTTTGTCTAATAGCCAGCGAGGTTCCAAACGATTCTTCACTTCTCTTATATAGGTTGAGTTCTTCAAGAATTTTATCTTGCATTTCTATAGAAGGAGTCATTCTTTCCAAACAAGAATGAAACCCCTTTGAAATTTCTACACTACTTTCAATCTTAGGATCAGAGTAATAAAATTCCGGATTTAGAAAAATTCCAGCTGCATGTAAGGGTCGATGCAACTGACGATCCCATCTCTTGTCAATGATGGCAAATACTTCTTCGTATTTGTCTTTGTTACTGAAACTCTTTTCTATGGTTTCCTTAGCCCTATCCATTGCTTCATAAATATATCCCATGGCCGGCTTTTTTTCGTTATCAACCAACCAGAGAACTTTAACCAGAGGACATGAGACTTTAAGAGCAAATGTGACAGTGTTCCAAAAGCTTGCCATCAAGATTGTTTGAACAACTCTTTTCCCCTGTTGTTCTTTACTCCATTTGCTATTTTTCCAATCTTCTGATGTAAACATCGTCCTCAAATTAAGTTTAACCCTCACGTAAACTCAAAACGTAATACAAGTACATTTGCAAAGCGAGTCTTGGCCGGTCTTATCAACTCTTGTCCATTAGTGTATCGCCTCATCATGTTCAACAACCCAGGACGACCATAAATAAAATTGCTAACCTCTATTGCTCTTTTTAGTGTTCTTCGGATATTCGAGATCTTGAAGATATCTTCCAACATCAAATCCAAGCAATGAGCAGCACATGGTGACCAAAACAAGTGCGGTCGTTTTGCTTCTAATAATCTCCCTAATAGATAATAAACAAAGCACATGTTTATAAAATTGAAAAATATTAAATATATTAATCAACTTTCAAGAAGAGAAGAGTACGTTAGTCAAATTCTTGTTAGTCAAATTCTTACCTGCCATCACATTTGCAGAGGCACTGTCTGTAACAACTTGTATTACATATTCTTCTCCAATCTGTTCAACAAAATCATCTAACAATTGAAACATTTTCAACCCATCCTTTACATACGAAGATGCATCAATGGATTCAACGAACATTGTTCCTTTAGGACTATTAACTAAAAAGTTTAGCAAAGTCCTATTTCTTCGATCGCATCCATCCATCCGTCATGATGGTACATCCAACTTTCTTCCATTCTTCCTTATGATCTTTCATCAAATCATTTGTTATTTTCAACTCCTTTTTCAAGCACTGAACTCGTAATTCATGATATGTAGGCGGCTTCAATCCAGACCAAATTGGCCTATTGCTTCAATCATAGGTCCGAAACTACTACTATTACAAGCATTCAATGGTATTCCGTAATCATAAAACCATCTAGCAATTTTTGGATGGCTTTCTCCTCATTTCCTTGTTGTAAGCGGCATTTAATGTTGTTTGCTTTCTGTTTCATCCTTTTGAATCACAATTTTTGGATTTCTTAAAAAAAGAATCCATCGGACCCTTTTGTTTCACCTTCTTTACGGCGGTTGAATTTGTTGATGACGCCGACGATCTCTTGTTTGCAGAAGAACAATAAATACTATCTTCATCTTCTTCATCTTCTTCTTCTTCAAGTGTATAATCGCTTTCAGGAATGATCAAATTTTTTTGTTCTTTCAACTCCTTTCTATTTGATATATATGCTTGAAGTTCTTTCTTTACATGTTCTGGGCATTTTCTACATGCCGTTACATTTCTATGACCCCCGACTAGGTGTTGTTTCATTCTATACACTCCTCCTTTTGTTACTTTATCACAAAAACTACATATGAAAGTATTTAGGTCTTCGGGCTTTACCAAACGAGAATACTTCCAAGCCGGATCTTTTCTCTGACTTCGTTCCTCAGCCATAAAACAAAATCTGACTAGAAATATAAAATCAGCCACAAACCTCACATTTTCATTACTAAATGCTAATGAGAATATGAGATTAAAAAAAAATAAAAGAGGAAAGAAAAATTTTGAACTTGTAGGAACAGGAATGGACACGGAATCAACACTCAATGAGCAAAGAAAAAGAGGAAAACAAACATTTTGAACTTATTTTCAACAATCCAACATTCCAACCTCAACAATAAGGCTCACTGTAAATGAAAGAAAAAAAAATCATATAATCAACTAGCTTCACTGTTACTTACCCGCCTAGATTCGAATGGCAAGAGAAATCAGCAACAAACTTCGGAATTGTGCGAGCGAATGAATGCCGAGCGGAAAATTGATACAATCACAACAAGTTTTGAGAAGAAAATCGAAGGAATGCGTGCGATTTTGGTCGTGAGGAAGAGAGGAGAAGAAATCGTGAGGAAGAGGGGCAGAGAGAAGAAGAAATCGTCTGGAGAAGAGAGGAGAAGAATTTTAGGGTTTTTTTAATGTATTTTTAATATTCGAAATTAAAAAAAAAAAAACAAAACGACGTCGTTTTGAGTAAGAATAACGAAATAAAAAAAAAATTTAAGCCCCAGGGGCGCGCGCCTTTCTGCGCCCAGGGCTTTCATGTAAGGCGCCCGCATGGGCGCGACTTTTAAAACACTGACCTTGGGTATAGTGTTCTATGCCTGTCCTAGGGACGCACATGGTTGCCCTAGGTATAGTTGAGCGAAGTTCCAATTTCTCGATTTTAAAAATCAAAATAATAAAGGAGGACACAGAGTTTCGAGTGTCGGACATGTGTCTGGAAGTATCATTGTCGGATCCATGTTCAACACGGATACTTTGTCAAAATAGAAGGGTCCGTGCTTCCTAGCTTATGGTGAGTTCTTAAGAGAAGGTTTGGTTGTTGGGTTCAATTTCTAGGAGTTTTATTCTTAACCTCTAGGGCGTGTTTGGGGGCGCCATTTATGTAATTGGTGTTGAGTTATCATAACCCAACTGCCCATCGATTATAATAACGGGTGGGTTGGTACAAACCTAATTCGTTGTTTTACATAACTCATGCCTTTGTTTGAGATAAACCATTTTTCTCTGCTCTGTTATTACAACTTGCACTCCAAACATCGTTCATTATAACCTATGTTATAATAATCTGCACCGATATTGAGATAAAATGGCATCTACCCTCCGTCAAAGCTGGATCAGTTGCAGCCCCATTGGGCAAAGAGATGCCTATTATAAAATTATTCGATACTCTCTAGATATGCATTTGGTTGCATCAAAATGCTTTCTTACTTGCATGTCTCATTTAATATTCGGAAGTGCACTAGCTTTTTTTTTTTTGATAGGAAACAAAAATACATGTATGTACTAGCTTCGTGGGAAATTTGAGAGTTTCCCATCTCTCTTAACTTATAGCTTATCATTCAAAAACACAATTGTCCTCCTCTATATCAGTTATCTTATACAGTTACTAGATTTGCACCTCTTTCCCGCCTACAAGTTTTCTGTGCAAAAATGGTCCCACACTTGCATCACACCTGTTTCGTGCTAGTCCTTCGGTCGCTCATTTATGCTAAATACATTATTAATAGTGTGACTATCACACACCTCACATCTGGCTTTAAATCTCAGTCATGATTATTGAGGAATACAAGTTTTGACAAGAACAAAGTTTTATAGATACCTTGTATTTGATTTAGAACAATAGTGGTTTGATTGATGTCTTCACAACACAATGATGCTGTTGGCCTAAATTTTTCTCTGCTGTCTGTGGCAGAGGAAGCTGATATTGAAGTACACTCACAAGTACAGGCTTGGACTATGGAGGCCCCGAGCTGATCTTGTGAAGGCCTGATGGTTTTTCCTAGGTTTACGAGGTGAATGGAATCGTTTACTGATCCTGGACCTTAGTTTGTAAAACTTTCGAGGATAGTTTTCGTTTACTAAATCTAAAGCATATCCTCATTTTACTGCTTTTTAATTGTTTCTATTCATTCACCAACTATATACTTATTCAGTTCATTTAAGACCTTGCATGAAGCTCAAATTTAATCAAAGTGCAAGTTCCAATTTATATCATGCTGCATGACAGGACACAAAGGATTCTGGTAAGTAGGGGTCTGCTCTCTCCAGAAATAATGCTTTATAGATTCAGTCAAAACCATAACACCAAGCCTTTCTGTAGGAGTTACATATTCAGAGAACTAGAAGCAATGGGCCTATAATAGATAAAGTTTGTGAACCCATTAAAAAACTCAACCTAGGACCAGTCACTTTTTTTGATATCTCTAGTGTCTAGGCTTGCTTACGGGCACATCAATTATTCTCAAGGGATAAATTGACCAACCCTACAATTTTTTTTCTTCTTCTAAAACCGGGTAATTAAAGTTTCGCTCCATTATACCTGAGGTAATTGGCTAGGCACCGACAGACATTGAAGGAATGGAAACATGGGAGGTGTCTAAAAATTAATGTGACAACTAAGTCTCGAACTTGAGACCTTTAGAAGAGCACACCTTCAAAACTCAAGTCTTCGATCACTGAGCCACCCTTTGAGAACAACCGACCCTACAATATTTGTCTGTAAGTAAATTTGTAAAAGAAATTAATTCTTAGTAAGATGAGTACTATGGATTAGACCCATAACCTTAAGCACATCGGTTTAAGAATCTTTTGCTCGTATATGAAACAGTGAAAAAGAAGAAGGGCCTACTATTGATAGTGGTCATTTTCCTTGTCACAGCAAAGCCACGTGTGAGGCAATGA

mRNA sequence

ATGCCCAAGAGTGCATTGTGGACATACATCGACTTGTCACTACCGTGCTTCGTCATCGCCAAAGCCCTACATGAAAGAGCCTTCAAAGGCCTTGCAAGCTTGAGAAATCCACCGTCTTCTGCTGCAATCTCTCGCTGCCGCGCCATCCACCGTCGTCTACCACAGTCGCTTCAAATCTCATTCGATCGCCGTCGAGATGATTTGAGACTCATGGGTTTGTTGTTCACAGCAAAAAGGATGGCGTGGAGGCAGATTATCTCCAACCATAGGTCTATACTGCAACCATACTCGGCTCCTCTATTTGCTAGATTCTTTTCTAAATCTATCCCGTATGTCGTAAAGGTCGGAATACCAGAATTTTTAAATGGTGTTGGGCATGGGGTTGAGTCACATGTGGCTAAACTTGAGTCAGAGATTGGTGACTTCCAGAAGCTGCTTGTTACTCGCACGCTTAAGCTGAAAAAACTTGGAATACCTATCAAACATAGGAAGCTGATATTGAAGTACACTCACAAGTACAGGCTTGGACTATGGAGGCCCCGAGCTGATCTTGTGAAGGCCTGATGGTTTTTCCTAGGTTTACGAGGTGAATGGAATCGTTTACTGATCCTGGACCTTAGTTTGTAAAACTTTCGAGGATAGTTTTCGTTTACTAAATCTAAAGCATATCCTCATTTTACTGCTTTTTAATTGTTTCTATTCATTCACCAACTATATACTTATTCAGTTCATTTAAGACCTTGCATGAAGCTCAAATTTAATCAAAGTGCAAGTTCCAATTTATATCATGCTGCATGACAGGACACAAAGGATTCTGGTAAGTAGGGGTCTGCTCTCTCCAGAAATAATGCTTTATAGATTCAGTCAAAACCATAACACCAAGCCTTTCTGTAGGAGTTACATATTCAGAGAACTAGAAGCAATGGGCCTATAATAGATAAAGTTTGTGAACCCATTAAAAAACTCAACCTAGGACCAGTCACTTTTTTTGATATCTCTAGTGTCTAGGCTTGCTTACGGGCACATCAATTATTCTCAAGGGATAAATTGACCAACCCTACAATTTTTTTTCTTCTTCTAAAACCGGGTAATTAAAGTTTCGCTCCATTATACCTGAGGTAATTGGCTAGGCACCGACAGACATTGAAGGAATGGAAACATGGGAGGTGTCTAAAAATTAATGTGACAACTAAGTCTCGAACTTGAGACCTTTAGAAGAGCACACCTTCAAAACTCAAGTCTTCGATCACTGAGCCACCCTTTGAGAACAACCGACCCTACAATATTTGTCTGTAAGTAAATTTGTAAAAGAAATTAATTCTTAGTAAGATGAGTACTATGGATTAGACCCATAACCTTAAGCACATCGGTTTAAGAATCTTTTGCTCGTATATGAAACAGTGAAAAAGAAGAAGGGCCTACTATTGATAGTGGTCATTTTCCTTGTCACAGCAAAGCCACGTGTGAGGCAATGA

Coding sequence (CDS)

ATGCCCAAGAGTGCATTGTGGACATACATCGACTTGTCACTACCGTGCTTCGTCATCGCCAAAGCCCTACATGAAAGAGCCTTCAAAGGCCTTGCAAGCTTGAGAAATCCACCGTCTTCTGCTGCAATCTCTCGCTGCCGCGCCATCCACCGTCGTCTACCACAGTCGCTTCAAATCTCATTCGATCGCCGTCGAGATGATTTGAGACTCATGGGTTTGTTGTTCACAGCAAAAAGGATGGCGTGGAGGCAGATTATCTCCAACCATAGGTCTATACTGCAACCATACTCGGCTCCTCTATTTGCTAGATTCTTTTCTAAATCTATCCCGTATGTCGTAAAGGTCGGAATACCAGAATTTTTAAATGGTGTTGGGCATGGGGTTGAGTCACATGTGGCTAAACTTGAGTCAGAGATTGGTGACTTCCAGAAGCTGCTTGTTACTCGCACGCTTAAGCTGAAAAAACTTGGAATACCTATCAAACATAGGAAGCTGATATTGAAGTACACTCACAAGTACAGGCTTGGACTATGGAGGCCCCGAGCTGATCTTGTGAAGGCCTGA

Protein sequence

MPKSALWTYIDLSLPCFVIAKALHERAFKGLASLRNPPSSAAISRCRAIHRRLPQSLQISFDRRRDDLRLMGLLFTAKRMAWRQIISNHRSILQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPIKHRKLILKYTHKYRLGLWRPRADLVKA
Homology
BLAST of Sed0027904 vs. NCBI nr
Match: KAG6590496.1 (hypothetical protein SDJN03_15919, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 214.9 bits (546), Expect = 5.8e-52
Identity = 107/121 (88.43%), Postives = 113/121 (93.39%), Query Frame = 0

Query: 70  LMGLLFT---AKRMAWRQIISNHRSILQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGH 129
           ++ LLF+   A+RMAWRQI SNHRSILQPYS PLFARFFSKSIPYVVKVGIPEFLNGVGH
Sbjct: 9   MIDLLFSHRRARRMAWRQIFSNHRSILQPYSTPLFARFFSKSIPYVVKVGIPEFLNGVGH 68

Query: 130 GVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPIKHRKLILKYTHKYRLGLWRPRADLVK 188
           GVESHVAKLESEIGDFQKLLVTRTLKLKKLGIP KHRKLILKYTHKYRLGLWRPR+D +K
Sbjct: 69  GVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRSDALK 128

BLAST of Sed0027904 vs. NCBI nr
Match: XP_023516779.1 (uncharacterized protein LOC111780577 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 212.6 bits (540), Expect = 2.9e-51
Identity = 104/108 (96.30%), Postives = 106/108 (98.15%), Query Frame = 0

Query: 80  MAWRQIISNHRSILQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEI 139
           MAWRQIISNHRSILQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEI
Sbjct: 1   MAWRQIISNHRSILQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEI 60

Query: 140 GDFQKLLVTRTLKLKKLGIPIKHRKLILKYTHKYRLGLWRPRADLVKA 188
           GDFQKLLVTRTLKLKKLGIP KHRKLILKYTHKYRLGLWRPR+D +KA
Sbjct: 61  GDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRSDALKA 108

BLAST of Sed0027904 vs. NCBI nr
Match: XP_022961412.1 (uncharacterized protein LOC111461991 [Cucurbita moschata])

HSP 1 Score: 209.9 bits (533), Expect = 1.9e-50
Identity = 103/108 (95.37%), Postives = 105/108 (97.22%), Query Frame = 0

Query: 80  MAWRQIISNHRSILQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEI 139
           MAWRQIISNHRS LQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEI
Sbjct: 1   MAWRQIISNHRSKLQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEI 60

Query: 140 GDFQKLLVTRTLKLKKLGIPIKHRKLILKYTHKYRLGLWRPRADLVKA 188
           GDFQKLLVTRTLKLKKLGIP KHRKLILKYTHKYRLGLWRPR+D +KA
Sbjct: 61  GDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRSDALKA 108

BLAST of Sed0027904 vs. NCBI nr
Match: KAG7024029.1 (hypothetical protein SDJN02_15058 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 209.5 bits (532), Expect = 2.4e-50
Identity = 102/108 (94.44%), Postives = 104/108 (96.30%), Query Frame = 0

Query: 80  MAWRQIISNHRSILQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEI 139
           MAWRQI SNHRSILQPYS PLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEI
Sbjct: 1   MAWRQIFSNHRSILQPYSTPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEI 60

Query: 140 GDFQKLLVTRTLKLKKLGIPIKHRKLILKYTHKYRLGLWRPRADLVKA 188
           GDFQKLLVTRTLKLKKLGIP KHRKLILKYTHKYRLGLWRPR+D +KA
Sbjct: 61  GDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRSDALKA 108

BLAST of Sed0027904 vs. NCBI nr
Match: XP_022968823.1 (uncharacterized protein LOC111467943 [Cucurbita maxima])

HSP 1 Score: 209.1 bits (531), Expect = 3.2e-50
Identity = 102/107 (95.33%), Postives = 104/107 (97.20%), Query Frame = 0

Query: 80  MAWRQIISNHRSILQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEI 139
           MAWRQIISNHRSILQPYSAPLFARFFSKS PYVVKVGIPEFLNGVGHGVESHVAKLESEI
Sbjct: 1   MAWRQIISNHRSILQPYSAPLFARFFSKSAPYVVKVGIPEFLNGVGHGVESHVAKLESEI 60

Query: 140 GDFQKLLVTRTLKLKKLGIPIKHRKLILKYTHKYRLGLWRPRADLVK 187
           GDFQKLLVTRTLKLKKLGIP KHRKLILKYTHKYRLGLWRPR+D +K
Sbjct: 61  GDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRSDALK 107

BLAST of Sed0027904 vs. ExPASy TrEMBL
Match: A0A6J1HA49 (uncharacterized protein LOC111461991 OS=Cucurbita moschata OX=3662 GN=LOC111461991 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 9.0e-51
Identity = 103/108 (95.37%), Postives = 105/108 (97.22%), Query Frame = 0

Query: 80  MAWRQIISNHRSILQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEI 139
           MAWRQIISNHRS LQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEI
Sbjct: 1   MAWRQIISNHRSKLQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEI 60

Query: 140 GDFQKLLVTRTLKLKKLGIPIKHRKLILKYTHKYRLGLWRPRADLVKA 188
           GDFQKLLVTRTLKLKKLGIP KHRKLILKYTHKYRLGLWRPR+D +KA
Sbjct: 61  GDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRSDALKA 108

BLAST of Sed0027904 vs. ExPASy TrEMBL
Match: A0A6J1HZ75 (uncharacterized protein LOC111467943 OS=Cucurbita maxima OX=3661 GN=LOC111467943 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 1.5e-50
Identity = 102/107 (95.33%), Postives = 104/107 (97.20%), Query Frame = 0

Query: 80  MAWRQIISNHRSILQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEI 139
           MAWRQIISNHRSILQPYSAPLFARFFSKS PYVVKVGIPEFLNGVGHGVESHVAKLESEI
Sbjct: 1   MAWRQIISNHRSILQPYSAPLFARFFSKSAPYVVKVGIPEFLNGVGHGVESHVAKLESEI 60

Query: 140 GDFQKLLVTRTLKLKKLGIPIKHRKLILKYTHKYRLGLWRPRADLVK 187
           GDFQKLLVTRTLKLKKLGIP KHRKLILKYTHKYRLGLWRPR+D +K
Sbjct: 61  GDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRSDALK 107

BLAST of Sed0027904 vs. ExPASy TrEMBL
Match: A0A0A0M1A4 (IGR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G555610 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 8.5e-49
Identity = 98/108 (90.74%), Postives = 102/108 (94.44%), Query Frame = 0

Query: 80  MAWRQIISNHRSILQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEI 139
           MAWR I+SNHRSILQPYSAPLFARFFSKS PY+VKVGIPEFL G+GHGVESHVAKLESEI
Sbjct: 2   MAWRNIVSNHRSILQPYSAPLFARFFSKSSPYIVKVGIPEFLTGIGHGVESHVAKLESEI 61

Query: 140 GDFQKLLVTRTLKLKKLGIPIKHRKLILKYTHKYRLGLWRPRADLVKA 188
           GDFQKLLVTRTLKLKKLGIP KHRKLILKYTHKYRLGLWRPR D +KA
Sbjct: 62  GDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRFDSLKA 109

BLAST of Sed0027904 vs. ExPASy TrEMBL
Match: A0A6J1DML5 (uncharacterized protein LOC111021823 OS=Momordica charantia OX=3673 GN=LOC111021823 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 1.1e-48
Identity = 100/108 (92.59%), Postives = 102/108 (94.44%), Query Frame = 0

Query: 80  MAWRQIISNHRSILQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEI 139
           MAWRQI SN+RSILQPYSAPLFARFFSKS PYVVKVGIPEFLNGVGHGVESHV KLESEI
Sbjct: 1   MAWRQIFSNNRSILQPYSAPLFARFFSKSTPYVVKVGIPEFLNGVGHGVESHVPKLESEI 60

Query: 140 GDFQKLLVTRTLKLKKLGIPIKHRKLILKYTHKYRLGLWRPRADLVKA 188
           GDFQKLLVTRTLKLKKLGIP KHRKLILKY HKYRLGLWRPRAD +KA
Sbjct: 61  GDFQKLLVTRTLKLKKLGIPCKHRKLILKYIHKYRLGLWRPRADSMKA 108

BLAST of Sed0027904 vs. ExPASy TrEMBL
Match: A0A1S3BPD9 (uncharacterized protein LOC103492108 OS=Cucumis melo OX=3656 GN=LOC103492108 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 5.5e-48
Identity = 97/108 (89.81%), Postives = 102/108 (94.44%), Query Frame = 0

Query: 80  MAWRQIISNHRSILQPYSAPLFARFFSKSIPYVVKVGIPEFLNGVGHGVESHVAKLESEI 139
           MAW+ IISNHRSILQPYSA LFARFFSKS PY+VKVGIPEFLNG+GHGVESHVAKLESEI
Sbjct: 1   MAWKNIISNHRSILQPYSASLFARFFSKSSPYIVKVGIPEFLNGIGHGVESHVAKLESEI 60

Query: 140 GDFQKLLVTRTLKLKKLGIPIKHRKLILKYTHKYRLGLWRPRADLVKA 188
           GDFQKLLVTRTLKLKKLGIP KHRKLILKYTHKYRLGLWRPR D +K+
Sbjct: 61  GDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRFDSLKS 108

BLAST of Sed0027904 vs. TAIR 10
Match: AT5G26800.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: IGR protein motif (InterPro:IPR019083); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 150.2 bits (378), Expect = 1.6e-36
Identity = 77/112 (68.75%), Postives = 93/112 (83.04%), Query Frame = 0

Query: 80  MAWRQIISNHRSIL--QPYSAPL-FARFFSKS-IPYVVKVGIPEFLNGVGHGVESHVAKL 139
           MAW ++I + RS+L   P S+ L F RF+SKS  PY VKVGIPEFL+G+G GVE+H+AKL
Sbjct: 1   MAWMRLIQSARSVLTTAPASSTLNFHRFYSKSAAPYHVKVGIPEFLSGIGGGVETHIAKL 60

Query: 140 ESEIGDFQKLLVTRTLKLKKLGIPIKHRKLILKYTHKYRLGLWRPRADLVKA 188
           E+E+GD  KLLVTRTL+LKK GIP KHRKLILKY+HKYRLGLW+PRAD +KA
Sbjct: 61  ETELGDLPKLLVTRTLRLKKFGIPCKHRKLILKYSHKYRLGLWKPRADAIKA 112

BLAST of Sed0027904 vs. TAIR 10
Match: AT3G05810.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: IGR protein motif (InterPro:IPR019083); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26800.1); Has 62 Blast hits to 62 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 135.6 bits (340), Expect = 4.2e-32
Identity = 71/112 (63.39%), Postives = 83/112 (74.11%), Query Frame = 0

Query: 80  MAWRQIISNHRSIL---QPYSAPLFARFF-SKSIPYVVKVGIPEFLNGVGHGVESHVAKL 139
           MAW ++I + R+ L   Q  S     RF  SK   Y VKVGIPEFL G+G G E+H+AK+
Sbjct: 1   MAWTRLIQSARAALGTAQSCSTLGLPRFHSSKPATYFVKVGIPEFLGGIGRGAETHIAKI 60

Query: 140 ESEIGDFQKLLVTRTLKLKKLGIPIKHRKLILKYTHKYRLGLWRPRADLVKA 188
           E+EIGD  KLLVTRTL+LKKLGIP KHRKLILKY  KYRLGLW+PRAD +KA
Sbjct: 61  ETEIGDLHKLLVTRTLRLKKLGIPCKHRKLILKYGQKYRLGLWKPRADAIKA 112

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG6590496.15.8e-5288.43hypothetical protein SDJN03_15919, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023516779.12.9e-5196.30uncharacterized protein LOC111780577 [Cucurbita pepo subsp. pepo][more]
XP_022961412.11.9e-5095.37uncharacterized protein LOC111461991 [Cucurbita moschata][more]
KAG7024029.12.4e-5094.44hypothetical protein SDJN02_15058 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022968823.13.2e-5095.33uncharacterized protein LOC111467943 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1HA499.0e-5195.37uncharacterized protein LOC111461991 OS=Cucurbita moschata OX=3662 GN=LOC1114619... [more]
A0A6J1HZ751.5e-5095.33uncharacterized protein LOC111467943 OS=Cucurbita maxima OX=3661 GN=LOC111467943... [more]
A0A0A0M1A48.5e-4990.74IGR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G555610 PE=4 SV... [more]
A0A6J1DML51.1e-4892.59uncharacterized protein LOC111021823 OS=Momordica charantia OX=3673 GN=LOC111021... [more]
A0A1S3BPD95.5e-4889.81uncharacterized protein LOC103492108 OS=Cucumis melo OX=3656 GN=LOC103492108 PE=... [more]
Match NameE-valueIdentityDescription
AT5G26800.11.6e-3668.75FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
AT3G05810.14.2e-3263.39FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019083IGR protein motifSMARTSM01238IGR_2coord: 117..176
e-value: 3.4E-22
score: 89.7
IPR019083IGR protein motifPFAMPF09597IGRcoord: 119..176
e-value: 1.1E-16
score: 60.6
NoneNo IPR availablePANTHERPTHR34955IGR MOTIF PROTEINcoord: 80..187
NoneNo IPR availablePANTHERPTHR34955:SF2IGR MOTIF PROTEINcoord: 80..187

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0027904.1Sed0027904.1mRNA
Sed0027904.2Sed0027904.2mRNA