Sed0027860 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTTTTCATTAAAAAAAAAAAAAGTCCAAATGTAAGTAGGCAAAGGGCATTCAATTTCAGTCCTATCGGCTAGAAGGACGAGAGATGGAAATTATACTGAGAAAATATATTTTCTTTTTATTTAATTCACCCGCCGCCACTACCAAAGGGAACGGCTTCCGCTATGTTGCCATATTCTTTTCTCTTCTTCCAATCTTCGAATTTCACCACTTTCCCTTCATTTTATTCATCTGCATAAGAATTTTTCTCATGGGTTATCACCAATTTTCTTCAAATTTAATGGGCTTTGTATGGTGAAGTTGGGTGCCTAATTTTGGTTTCTCTTTGGTCGGACATGTCTGTTAAATTTGCTTTTTTTTCCTCCTCGGTTCCTTCAATATCTTCACCCTTTGCCCGCCGGAGAAGCTTACAGGTGCTTTTTGCTCTTATTCGTTTTTTCCTATGTTGGTATTTGTTTTCGAAATTTATGTGTTCTATAAATTGATGTTTGAATCTTGAGCTCGGTCGTGTGAGTTTGATTCCCAAATGGGGTCGTTAAATTTGTTAGAACCTTGCCGATGAATTGGCTCATTCGTTGTTACCTGGATTTTTTTCCCATAAATTGATGTTTGAACATTGCTGGGTTTTTTTCTTTTTTGATATCTGTGACGGTCTGGGTGAGCTTCGTGGACCTCGATTATTGTATTGTCACCAGACATAGAGTTTAACTGTATAAAATATTTGGATGTCAAGAAAATTTTAGGAAATTAATTCTTACTTAGGTTATCACCATGAATTGAACCCACCCCGTTTCTGTTTTTTTAATGTTGTTTTGAACTTTTGATCACTAGACTATCAATATTCAATGGTGGTTTAACATTTCTCTTGTTGATAAGTAGCTTGCTTTCTTTCTTATAAATGGGTGTGTTTGTGTGCTTTCATATGTTAGTGTCCTCTTTCTTTCTCTCATATAGGTGGATTGAGAAAACTGGTTGGTGCTGTGGGTTAAAATGTAATTTGAAGCAAACACAACTAGGATTAGATAGGCTTTGGATTTTGCACAGGTGCTCTTTTTTGTTAATTCTTATGGAGAATTAAACGTATTGAGTGTCTGTCTACAATGGCTAATCATACTGATATCTTTATTGAGAGTCTTGCTTGCTATCTCAAATTTTTTGACTTGACATTCACTGACTAGTTGGAGGATTCTAGTATGATAGTACTTTTGACATTGTTGTTGTCGTCGTCGTTGTCATTTTGTGCTATATGATCTGAAATTGATTTAATGGGCTCTGTGTTTTTATTTTGATTTCCAGTTGAGCTTTTCTCAAGGATTATATGGCGTTGGCAGCCAGCAACCAAATTTCCAGAGACTAACATTTGCTAAATGTAGGGTTTTCTTTTACTTTTTTTATTAGGCATGATTCTTTTTTTAAAAAAAATTATTTTTATTGTGTGTAAAATGGCTATGAAATGGGTCATCTGGTTTCTATTTTCTTGACTTCTCATAGCAACCATATCTTATTAGTTTATTTGTACACTCTTTTGGTTATTTGGTGAGATGCCCATTGTGACTTATTTCCCAAAATGCTTATTTTGATCAAATCCAATGATTTTTGTTGAGGATCACATGGAGACATCCTAGCATTTATTTATAAGATAGGTTGGTTACTCCTCTCACTACCAATTGGTTTTGAAATGGAATCTGATACTATTTAATATAATATCTGAGTCCATTAAATCCAAATAGGTATCTGGTCCAATAAAAAGGAAATTGAGATCTGATCCAAGATTGGTGAATCCAGAGAGGAACCATCTTGAGGGGCAGGTTGAGGGTCTCACATTGGAAAAATGATGAGACCTAGATGAGCTACTTCTCTCATTACCAATTGGTTTTGAGATGAAATCTCGTACTATCTTTTAGTTTTTATGTTTTTTGTTTGATCTTCTAAATGATACGTTTCTTGGTTCGCTTTTGGCATTGTGGATAGGTGAATCATTCAAGTTAATGCATGGATTGATGTGGTCTTGGAGAAGATTTCCAAGTAGGCAGAATGTTCTCTCTGCTATTTCAGAAGATCAGTCTCAATGCAGTGACTTAGTTGATCCAGAGCATGTAAATCAGCATTCCACTGATGAAGATATCTCCCTTGAAAGCAATTCATCTTTACATTACGAAGCCACTGGTGGGAAACCGGGTTTCGTCTCATTTTACAACTATTCTTATAAAGAAGGAAATCCATTTCCTTTGTCTAGCACACAAAGCAATCAACACAAATTCTTATGGTTTGTTGGTCCAGCAGTCCTGGTAGCTTCTTTCATTTTCCCCTCGCTTTATCTAAGGAAAATCATTTCAAATATTTTTGAGGACTCCCTGTTGACAGGTCAGTACAGTTTCTTGCTTCTGTAGTCTCTCAGCTAGTTAGTATATTTATATTCATTAAGGAAGCGTTTGGGCCACTGTGTAAGGGTGGGTTAGGTTGGGTTATAATAATCCAACCTGTGTTTGGACTAGGTGGATTAGCCTATAACCTTTCATCCCAACTATAGTAACCCTCCAACCATGTTATAATAACCTATTCTATAATTTTCCTATAAAAAAAAACCTCTTCTATAATAAACTCAATGCTATAATATTTTAAAGTTATAATAACATGCACCTCAAATATCGGTTATCATAATCCCTGTTATAATAACTTGTACCCCAAATGCTGGTTATTATAACCTCCTCTATTATAATAACCCACCATTGCCCCACCCAAGTAATACTCATGTGTGTGAACATGACCCTTATCAGCAAGGTCAATAAAGTGTAAAGGAGACATTTTAGATTGACCATCTATTTATATGGCTTTTAATTGAGTTTGTGTAAGAAGACAATTAAGTTTAGATGTTTTGAAACTCATTCATTTTTTAAGAATATTGGAGGCCAAGGAGATAATACTAGGCACTCTTGGATCTTAAAAGAGTTTTACAATTTCATAAAAGGTTTATATTCTGTTAAATGTGAAATTTGTTTTGTCATGCTAAACGTTTACTTTCGAACTTTTGAATCGGTTGGAAATGTTTTTCTTCATTTGAAATTCTTTATTGTAAACTACGAACTATCTTCGGATTGCAGACTTTCTTATACTGTTCTTTACGGAAGCACTGTTCTACTGTGGTGTTGCGGCATTTCTTTTCTTAATAGACCGTTCAAGGAGGCCTACTGAACCCGGTATCGTGAAAAGTAGTTATCAAACACTCTCTAATCAATTTGGACAGAGGATCTCTTCGGTAGCTGCTTTAGCACTCAGCTTAATAATACCCATGGTCACTATGGGATTGGTGTGGCCATGGACCGGCCCTGCGGCATCTGCAACTCTTGCACCTTTCCTTGTTGGCATTGTTGTCCAATTTGCATTTGAACAATATGCACGGCGCAACAACTCGCCTTCGTGGCCTGTTATTCCAATCGTCTTTCAAGTAAGAACATTCATATACAATCATTCCTTCACATCTTTTCTTTTTCTTACCCAACCATGCTGGATTCATTTCATTTAGTATGCGGAAGGTCGATTATTTCCCTCTGGATTGTTTATGTGGCCTTCTGTGATATGGTATTCAATATCTTGGCATTGAAATTAAAGAGATCTTGTTAAACAGGTTTATAGATTGCATCAACTTAATAGAGCAGCTCAACTGGTGACAGCTCTATCATATACCATAAAAGGAGCTGAAATGACCCCACACAACTTGGCCATAAACAGCTCTCTGGGTACATTGTTGAATGTTCTTCAATGTCTTGGGATAATCTGTATCTGGTCTCTCTCAAGCTTTCTTATGAGGTTTTTCCCGTCGAATGCTGCGATGCCACAGTAAAGTACGAAACCAGACGATGATTCGCAAGTTTTATAGGACCAAACTGCTGTTAACCTAATAAACTGCAGATCTAATTTTCCGTGCTCGAACATTGCGGTCGATGAATAGAATGTTCATTGGAACATATTTCTCTCTAACAGCAAGTTGAAATGTTTATGTGGGAATTTGTGGATGATTAATGTTGTAAAAGGAGAAGGAAATATTGAAGAAAATGGTGATTCTTTTTGCAACTTCTTATATTTTTTGAATTTTCCTTTGAATATGCTTCCTACTAGAGAAGGCAACTTTTATTACCCTCACTTTTTTTGGAACAGTTTAGAAGACTTGATATTTCTGAAACTATGTTAGGAACATTTTGGAACTGAGGATG CTTTTTCATTAAAAAAAAAAAAAGTCCAAATGTAAGTAGGCAAAGGGCATTCAATTTCAGTCCTATCGGCTAGAAGGACGAGAGATGGAAATTATACTGAGAAAATATATTTTCTTTTTATTTAATTCACCCGCCGCCACTACCAAAGGGAACGGCTTCCGCTATGTTGCCATATTCTTTTCTCTTCTTCCAATCTTCGAATTTCACCACTTTCCCTTCATTTTATTCATCTGCATAAGAATTTTTCTCATGGGTTATCACCAATTTTCTTCAAATTTAATGGGCTTTGTATGGTGAAGTTGGGTGCCTAATTTTGGTTTCTCTTTGGTCGGACATGTCTGTTAAATTTGCTTTTTTTTCCTCCTCGGTTCCTTCAATATCTTCACCCTTTGCCCGCCGGAGAAGCTTACAGTTGAGCTTTTCTCAAGGATTATATGGCGTTGGCAGCCAGCAACCAAATTTCCAGAGACTAACATTTGCTAAATGTGAATCATTCAAGTTAATGCATGGATTGATGTGGTCTTGGAGAAGATTTCCAAGTAGGCAGAATGTTCTCTCTGCTATTTCAGAAGATCAGTCTCAATGCAGTGACTTAGTTGATCCAGAGCATGTAAATCAGCATTCCACTGATGAAGATATCTCCCTTGAAAGCAATTCATCTTTACATTACGAAGCCACTGGTGGGAAACCGGGTTTCGTCTCATTTTACAACTATTCTTATAAAGAAGGAAATCCATTTCCTTTGTCTAGCACACAAAGCAATCAACACAAATTCTTATGGTTTGTTGGTCCAGCAGTCCTGGTAGCTTCTTTCATTTTCCCCTCGCTTTATCTAAGGAAAATCATTTCAAATATTTTTGAGGACTCCCTGTTGACAGACTTTCTTATACTGTTCTTTACGGAAGCACTGTTCTACTGTGGTGTTGCGGCATTTCTTTTCTTAATAGACCGTTCAAGGAGGCCTACTGAACCCGGTATCGTGAAAAGTAGTTATCAAACACTCTCTAATCAATTTGGACAGAGGATCTCTTCGGTAGCTGCTTTAGCACTCAGCTTAATAATACCCATGGTCACTATGGGATTGGTGTGGCCATGGACCGGCCCTGCGGCATCTGCAACTCTTGCACCTTTCCTTGTTGGCATTGTTGTCCAATTTGCATTTGAACAATATGCACGGCGCAACAACTCGCCTTCGTGGCCTGTTATTCCAATCGTCTTTCAAGTTTATAGATTGCATCAACTTAATAGAGCAGCTCAACTGGTGACAGCTCTATCATATACCATAAAAGGAGCTGAAATGACCCCACACAACTTGGCCATAAACAGCTCTCTGGGTACATTGTTGAATGTTCTTCAATGTCTTGGGATAATCTGTATCTGGTCTCTCTCAAGCTTTCTTATGAGGTTTTTCCCGTCGAATGCTGCGATGCCACAGTAAAGTACGAAACCAGACGATGATTCGCAAGTTTTATAGGACCAAACTGCTGTTAACCTAATAAACTGCAGATCTAATTTTCCGTGCTCGAACATTGCGGTCGATGAATAGAATGTTCATTGGAACATATTTCTCTCTAACAGCAAGTTGAAATGTTTATGTGGGAATTTGTGGATGATTAATGTTGTAAAAGGAGAAGGAAATATTGAAGAAAATGGTGATTCTTTTTGCAACTTCTTATATTTTTTGAATTTTCCTTTGAATATGCTTCCTACTAGAGAAGGCAACTTTTATTACCCTCACTTTTTTTGGAACAGTTTAGAAGACTTGATATTTCTGAAACTATGTTAGGAACATTTTGGAACTGAGGATG ATGTCTGTTAAATTTGCTTTTTTTTCCTCCTCGGTTCCTTCAATATCTTCACCCTTTGCCCGCCGGAGAAGCTTACAGTTGAGCTTTTCTCAAGGATTATATGGCGTTGGCAGCCAGCAACCAAATTTCCAGAGACTAACATTTGCTAAATGTGAATCATTCAAGTTAATGCATGGATTGATGTGGTCTTGGAGAAGATTTCCAAGTAGGCAGAATGTTCTCTCTGCTATTTCAGAAGATCAGTCTCAATGCAGTGACTTAGTTGATCCAGAGCATGTAAATCAGCATTCCACTGATGAAGATATCTCCCTTGAAAGCAATTCATCTTTACATTACGAAGCCACTGGTGGGAAACCGGGTTTCGTCTCATTTTACAACTATTCTTATAAAGAAGGAAATCCATTTCCTTTGTCTAGCACACAAAGCAATCAACACAAATTCTTATGGTTTGTTGGTCCAGCAGTCCTGGTAGCTTCTTTCATTTTCCCCTCGCTTTATCTAAGGAAAATCATTTCAAATATTTTTGAGGACTCCCTGTTGACAGACTTTCTTATACTGTTCTTTACGGAAGCACTGTTCTACTGTGGTGTTGCGGCATTTCTTTTCTTAATAGACCGTTCAAGGAGGCCTACTGAACCCGGTATCGTGAAAAGTAGTTATCAAACACTCTCTAATCAATTTGGACAGAGGATCTCTTCGGTAGCTGCTTTAGCACTCAGCTTAATAATACCCATGGTCACTATGGGATTGGTGTGGCCATGGACCGGCCCTGCGGCATCTGCAACTCTTGCACCTTTCCTTGTTGGCATTGTTGTCCAATTTGCATTTGAACAATATGCACGGCGCAACAACTCGCCTTCGTGGCCTGTTATTCCAATCGTCTTTCAAGTTTATAGATTGCATCAACTTAATAGAGCAGCTCAACTGGTGACAGCTCTATCATATACCATAAAAGGAGCTGAAATGACCCCACACAACTTGGCCATAAACAGCTCTCTGGGTACATTGTTGAATGTTCTTCAATGTCTTGGGATAATCTGTATCTGGTCTCTCTCAAGCTTTCTTATGAGGTTTTTCCCGTCGAATGCTGCGATGCCACAGTAA MSVKFAFFSSSVPSISSPFARRRSLQLSFSQGLYGVGSQQPNFQRLTFAKCESFKLMHGLMWSWRRFPSRQNVLSAISEDQSQCSDLVDPEHVNQHSTDEDISLESNSSLHYEATGGKPGFVSFYNYSYKEGNPFPLSSTQSNQHKFLWFVGPAVLVASFIFPSLYLRKIISNIFEDSLLTDFLILFFTEALFYCGVAAFLFLIDRSRRPTEPGIVKSSYQTLSNQFGQRISSVAALALSLIIPMVTMGLVWPWTGPAASATLAPFLVGIVVQFAFEQYARRNNSPSWPVIPIVFQVYRLHQLNRAAQLVTALSYTIKGAEMTPHNLAINSSLGTLLNVLQCLGIICIWSLSSFLMRFFPSNAAMPQ Homology
BLAST of Sed0027860 vs. NCBI nr
Match: XP_008464550.1 (PREDICTED: uncharacterized protein LOC103502400 [Cucumis melo]) HSP 1 Score: 597.4 bits (1539), Expect = 8.2e-167 Identity = 310/367 (84.47%), Postives = 331/367 (90.19%), Query Frame = 0
BLAST of Sed0027860 vs. NCBI nr
Match: KAA0057843.1 (uncharacterized protein E6C27_scaffold274G001300 [Cucumis melo var. makuwa] >TYJ98527.1 uncharacterized protein E5676_scaffold350G001320 [Cucumis melo var. makuwa]) HSP 1 Score: 596.7 bits (1537), Expect = 1.4e-166 Identity = 309/364 (84.89%), Postives = 330/364 (90.66%), Query Frame = 0
BLAST of Sed0027860 vs. NCBI nr
Match: XP_022135241.1 (uncharacterized protein LOC111007252 [Momordica charantia]) HSP 1 Score: 596.3 bits (1536), Expect = 1.8e-166 Identity = 311/368 (84.51%), Postives = 329/368 (89.40%), Query Frame = 0
BLAST of Sed0027860 vs. NCBI nr
Match: XP_038879012.1 (uncharacterized protein LOC120071064 isoform X1 [Benincasa hispida]) HSP 1 Score: 588.6 bits (1516), Expect = 3.8e-164 Identity = 307/364 (84.34%), Postives = 329/364 (90.38%), Query Frame = 0
BLAST of Sed0027860 vs. NCBI nr
Match: XP_011656390.2 (uncharacterized protein LOC105435726 [Cucumis sativus] >KGN63569.2 hypothetical protein Csa_013797 [Cucumis sativus]) HSP 1 Score: 586.6 bits (1511), Expect = 1.4e-163 Identity = 305/367 (83.11%), Postives = 329/367 (89.65%), Query Frame = 0
BLAST of Sed0027860 vs. ExPASy TrEMBL
Match: A0A1S3CLW8 (uncharacterized protein LOC103502400 OS=Cucumis melo OX=3656 GN=LOC103502400 PE=4 SV=1) HSP 1 Score: 597.4 bits (1539), Expect = 4.0e-167 Identity = 310/367 (84.47%), Postives = 331/367 (90.19%), Query Frame = 0
BLAST of Sed0027860 vs. ExPASy TrEMBL
Match: A0A5D3BHC7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001320 PE=4 SV=1) HSP 1 Score: 596.7 bits (1537), Expect = 6.7e-167 Identity = 309/364 (84.89%), Postives = 330/364 (90.66%), Query Frame = 0
BLAST of Sed0027860 vs. ExPASy TrEMBL
Match: A0A6J1C043 (uncharacterized protein LOC111007252 OS=Momordica charantia OX=3673 GN=LOC111007252 PE=4 SV=1) HSP 1 Score: 596.3 bits (1536), Expect = 8.8e-167 Identity = 311/368 (84.51%), Postives = 329/368 (89.40%), Query Frame = 0
BLAST of Sed0027860 vs. ExPASy TrEMBL
Match: A0A6J1E2A7 (uncharacterized protein LOC111430132 OS=Cucurbita moschata OX=3662 GN=LOC111430132 PE=4 SV=1) HSP 1 Score: 583.6 bits (1503), Expect = 5.9e-163 Identity = 310/368 (84.24%), Postives = 329/368 (89.40%), Query Frame = 0
BLAST of Sed0027860 vs. ExPASy TrEMBL
Match: A0A0A0LS19 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004340 PE=4 SV=1) HSP 1 Score: 580.5 bits (1495), Expect = 5.0e-162 Identity = 303/367 (82.56%), Postives = 327/367 (89.10%), Query Frame = 0
BLAST of Sed0027860 vs. TAIR 10
Match: AT5G63040.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 331.3 bits (848), Expect = 1.0e-90 Identity = 200/355 (56.34%), Postives = 242/355 (68.17%), Query Frame = 0
BLAST of Sed0027860 vs. TAIR 10
Match: AT5G63040.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 330.1 bits (845), Expect = 2.3e-90 Identity = 178/268 (66.42%), Postives = 209/268 (77.99%), Query Frame = 0
BLAST of Sed0027860 vs. TAIR 10
Match: AT1G48460.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G63040.1); Has 60 Blast hits to 60 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 145.2 bits (365), Expect = 1.0e-34 Identity = 100/317 (31.55%), Postives = 149/317 (47.00%), Query Frame = 0
BLAST of Sed0027860 vs. TAIR 10
Match: AT3G60590.3 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 63.2 bits (152), Expect = 5.2e-10 Identity = 51/171 (29.82%), Postives = 82/171 (47.95%), Query Frame = 0
BLAST of Sed0027860 vs. TAIR 10
Match: AT3G60590.1 (unknown protein; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48460.1); Has 81 Blast hits to 81 proteins in 19 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). ) HSP 1 Score: 63.2 bits (152), Expect = 5.2e-10 Identity = 51/171 (29.82%), Postives = 82/171 (47.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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