Sed0027819 (gene) Chayote v1

Overview


Name	Sed0027819
Type	gene
Organism	Sechium edule (Chayote v1)
Description	PHD finger-like protein
Location	LG04: 14226427 .. 14229015 (+)
RNA-Seq Expression	Sed0027819
Synteny	Sed0027819

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAAACATGATCTTCAGTTTTTTCTCTGGACCTGAATTTTCTTCTTCCCCTTCCCCTTCCCATTTCTTCTCTCTGAAAACCCTAATTGCACCTTCTTCCTTGTAAATTTCCTTCCTCTACAGTACCAGAGATCAGGTATTCACTTTCCCCTTTTCTTCTCTTTTCCCACTCTGCCCTTATTTTCCTTTTCAATTCTCTCAATTACCCTTGTTTTCTTCTTTTATGGTTTGTTCCTTCAATTCACCCGTTTCCATTGCTGACACCCTTTTGATGTTCTTCGATTCTCTATATATTCTTGTTTTTCTTCCTCATATTGCGTAATTCGACCGGTTTTCTATTGCCTGGGGGTCTTCTTTCAATTTTTTGTTTCCATTTCTGCATGGTTTGTTTCATTTGATTGTGTTCCGGTTGGTTTATCTTTATTCTGTTTTGCAATTGGATGTGGATTTCGTTTTCTGATTTTGGAAAGGGGAGTGCTGTGTTCATGAATGAAATGCAGTTTAAATTCGTGCCCTGATTCTGCCCTTGATCCATTTATGTGAGATCTTCCTCATGTAGCAGATTGTGGCGTGGCAACTTTGAATTGAAATTTATACTTTTGATTGCTGAGGATTTTGTTTGAGTTGGATGTTGTTTTTGTTGTTTCTGGGTCTTTTTTAAAATTGAATTTAGAGTCTGATGGAATGTGCAGAGTGGAATTTGTGATAGAATTCGAAGCTAATATTCTATTCTGATGATTAGTTTCAGTGGCAGTAAAGTCAACTTGGTTTCTTGTTCCTTTGGAGAAATATTAGGCAATTTATGTTTAAAACTATAACTGGGAAGGGGAAGAATGGAGGCTAACTGTGACGTAAATCACCTCGATTCCGACGCCCTTTTACCTCCAAGAAAGCGTCTTCTTGCTGGATTGAGAAAGCTAGGTGCCGATGGTGATGGTAATTTTAATCTGACACCAGCTGCCTCTACCTCTTGTTCTCCCCCTCCTTCCCCTTCCTATGGCTTCACATCTATTGAATTCAATACACGGCTTAACAATCTGTTGAGTGCTCATTCGAATACTAACCTATCACCCGAGGAGATAGTGGAGGCCTCGAGATCAGCTGCTGCTGCAGCTGTGAAGGCTGCAGAGGCTGCTAGGGCAGCAGCTGAAGAGAAGGCTGCTATTGCAGCAAAGGCAGTTGCAGCTGCAAAGAGTGCCATGGACTTGGTTGCCTCTATTTCTGAAGAAGCAGCCTGTAAAGAAACAAACCTGAGAAAGAACAAGCTGAAGAAACATGTCCCAGTCCAGTTTCTGTACACAAAATATCAACCTCTCGAGAATACCAAGACAGATGAAGAGTTAGCCCGTACATTGCATCGAACAATCAATAGCTCCCCGAGAATTTCAAAGAATTCATCTGGTTCTGATGTTAGAGGCCGCAGACGTAAGAGGTTGAAAACCTCATCTGGTTCTGAGAAAACTAGGGTTCCCAATTGTGGCATCTCACAGGAGTTGGAGCCTACTGCTACATGCAATGGGCATAATAAAACTAACGAGGCCGACTCTGTGTGCAGCTTTCCGGAAGTCTACAAGCTCAAAGCCAACGAGAAGACTAGTAAGTATGAGAAGAACAATCACTCTCAGAAAGATAACAGAGTAGCAGAGACAAGTCAGAAGGAGAAAATGTGTGACAATATTAGTGTCACTGTTAGAAAGAGGGGAAGAATAAAGCTTAAAAAATTGCCATTGAGTATTTGTTCTTTCAGGGATCAGAAAACTCACAAAGATGATATGAACAATGGAAGTTCACCAATACCAACTGTGCAAAACATGGGGTCGTCTCCTGCATCTGAAAATGTTAATTCGCATTCTGTAGATTGCCCTACCGAAGGTGTGATGCCAATAGACTCAACATCAGTATGGAAATGTCAGGAGTTTAAAGCTCCCCTTTCTGTCAAACAGAATAAAGTTATGCAGTCATGACCTGAAATGACATATGGTAAAAGGTTGCCACCTTAGAAGTTGATCGTAGAGGTACGATCCGTGCAGCTTTTCTTATAGAAACGACTTTACTCCCTGCATATTTTGTTTCACATTGAACTGGGACAGAAATTGTAAATTTCATATTGTGTGTTTGATTATTCTCCAGAGTTCATAGATATGAGACATCCTTTATGACACAGAGCTTGAAGTCAAAATAAGAAGGTAACAATAAACTGAATACTTGAACACTCCTTGTTTCACAGGAGAGGCATTTTTGTCTAGATTTGATTATGTATGCTGAATATACTAATAAGTAATCCCCATGTATCTGTAGGTAATATCTGTAGATGGTTGTTTTCATGGTCCTGTTACTTAATAATGTCCTAATTTATAGGAGTTGTAGATTGAAAGAAAATGAACAAAGCTTCAAACAATTGGGTTGTACTTGTGGAAAGAGTGAACTGTTTGCTTTTTGTTGGTCATCTAGCCTTTCTATATCATCTTAGTGTTGTTGATTATTGATTAATTGAGATTGAGATTGTATTCTCTATATTCCTTTTTTTTCCCCCTTTTAGAGGAGGATGCCCTATCCTCATGTAGCTTTGTAATTGCTATTATATATTAAT

mRNA sequence

TAAAACATGATCTTCAGTTTTTTCTCTGGACCTGAATTTTCTTCTTCCCCTTCCCCTTCCCATTTCTTCTCTCTGAAAACCCTAATTGCACCTTCTTCCTTGTAAATTTCCTTCCTCTACAGTACCAGAGATCAGTTTCAGTGGCAGTAAAGTCAACTTGGTTTCTTGTTCCTTTGGAGAAATATTAGGCAATTTATGTTTAAAACTATAACTGGGAAGGGGAAGAATGGAGGCTAACTGTGACGTAAATCACCTCGATTCCGACGCCCTTTTACCTCCAAGAAAGCGTCTTCTTGCTGGATTGAGAAAGCTAGGTGCCGATGGTGATGGTAATTTTAATCTGACACCAGCTGCCTCTACCTCTTGTTCTCCCCCTCCTTCCCCTTCCTATGGCTTCACATCTATTGAATTCAATACACGGCTTAACAATCTGTTGAGTGCTCATTCGAATACTAACCTATCACCCGAGGAGATAGTGGAGGCCTCGAGATCAGCTGCTGCTGCAGCTGTGAAGGCTGCAGAGGCTGCTAGGGCAGCAGCTGAAGAGAAGGCTGCTATTGCAGCAAAGGCAGTTGCAGCTGCAAAGAGTGCCATGGACTTGGTTGCCTCTATTTCTGAAGAAGCAGCCTGTAAAGAAACAAACCTGAGAAAGAACAAGCTGAAGAAACATGTCCCAGTCCAGTTTCTGTACACAAAATATCAACCTCTCGAGAATACCAAGACAGATGAAGAGTTAGCCCGTACATTGCATCGAACAATCAATAGCTCCCCGAGAATTTCAAAGAATTCATCTGGTTCTGATGTTAGAGGCCGCAGACGTAAGAGGTTGAAAACCTCATCTGGTTCTGAGAAAACTAGGGTTCCCAATTGTGGCATCTCACAGGAGTTGGAGCCTACTGCTACATGCAATGGGCATAATAAAACTAACGAGGCCGACTCTGTGTGCAGCTTTCCGGAAGTCTACAAGCTCAAAGCCAACGAGAAGACTAGTAAGTATGAGAAGAACAATCACTCTCAGAAAGATAACAGAGTAGCAGAGACAAGTCAGAAGGAGAAAATGTGTGACAATATTAGTGTCACTGTTAGAAAGAGGGGAAGAATAAAGCTTAAAAAATTGCCATTGAGTATTTGTTCTTTCAGGGATCAGAAAACTCACAAAGATGATATGAACAATGGAAGTTCACCAATACCAACTGTGCAAAACATGGGGTCGTCTCCTGCATCTGAAAATGTTAATTCGCATTCTGTAGATTGCCCTACCGAAGGTGTGATGCCAATAGACTCAACATCAGTATGGAAATGTCAGGAGTTTAAAGCTCCCCTTTCTGTCAAACAGAATAAAGTTATGCAGTCATGACCTGAAATGACATATGGTAAAAGGTTGCCACCTTAGAAGTTGATCGTAGAGAGTTCATAGATATGAGACATCCTTTATGACACAGAGCTTGAAGTCAAAATAAGAAGGTAATATCTGTAGATGGTTGTTTTCATGGTCCTGTTACTTAATAATGTCCTAATTTATAGGAGTTGTAGATTGAAAGAAAATGAACAAAGCTTCAAACAATTGGGTTGTACTTGTGGAAAGAGTGAACTGTTTGCTTTTTGTTGGTCATCTAGCCTTTCTATATCATCTTAGTGTTGTTGATTATTGATTAATTGAGATTGAGATTGTATTCTCTATATTCCTTTTTTTTCCCCCTTTTAGAGGAGGATGCCCTATCCTCATGTAGCTTTGTAATTGCTATTATATATTAAT

Coding sequence (CDS)

ATGGAGGCTAACTGTGACGTAAATCACCTCGATTCCGACGCCCTTTTACCTCCAAGAAAGCGTCTTCTTGCTGGATTGAGAAAGCTAGGTGCCGATGGTGATGGTAATTTTAATCTGACACCAGCTGCCTCTACCTCTTGTTCTCCCCCTCCTTCCCCTTCCTATGGCTTCACATCTATTGAATTCAATACACGGCTTAACAATCTGTTGAGTGCTCATTCGAATACTAACCTATCACCCGAGGAGATAGTGGAGGCCTCGAGATCAGCTGCTGCTGCAGCTGTGAAGGCTGCAGAGGCTGCTAGGGCAGCAGCTGAAGAGAAGGCTGCTATTGCAGCAAAGGCAGTTGCAGCTGCAAAGAGTGCCATGGACTTGGTTGCCTCTATTTCTGAAGAAGCAGCCTGTAAAGAAACAAACCTGAGAAAGAACAAGCTGAAGAAACATGTCCCAGTCCAGTTTCTGTACACAAAATATCAACCTCTCGAGAATACCAAGACAGATGAAGAGTTAGCCCGTACATTGCATCGAACAATCAATAGCTCCCCGAGAATTTCAAAGAATTCATCTGGTTCTGATGTTAGAGGCCGCAGACGTAAGAGGTTGAAAACCTCATCTGGTTCTGAGAAAACTAGGGTTCCCAATTGTGGCATCTCACAGGAGTTGGAGCCTACTGCTACATGCAATGGGCATAATAAAACTAACGAGGCCGACTCTGTGTGCAGCTTTCCGGAAGTCTACAAGCTCAAAGCCAACGAGAAGACTAGTAAGTATGAGAAGAACAATCACTCTCAGAAAGATAACAGAGTAGCAGAGACAAGTCAGAAGGAGAAAATGTGTGACAATATTAGTGTCACTGTTAGAAAGAGGGGAAGAATAAAGCTTAAAAAATTGCCATTGAGTATTTGTTCTTTCAGGGATCAGAAAACTCACAAAGATGATATGAACAATGGAAGTTCACCAATACCAACTGTGCAAAACATGGGGTCGTCTCCTGCATCTGAAAATGTTAATTCGCATTCTGTAGATTGCCCTACCGAAGGTGTGATGCCAATAGACTCAACATCAGTATGGAAATGTCAGGAGTTTAAAGCTCCCCTTTCTGTCAAACAGAATAAAGTTATGCAGTCATGA

Protein sequence

MEANCDVNHLDSDALLPPRKRLLAGLRKLGADGDGNFNLTPAASTSCSPPPSPSYGFTSIEFNTRLNNLLSAHSNTNLSPEEIVEASRSAAAAAVKAAEAARAAAEEKAAIAAKAVAAAKSAMDLVASISEEAACKETNLRKNKLKKHVPVQFLYTKYQPLENTKTDEELARTLHRTINSSPRISKNSSGSDVRGRRRKRLKTSSGSEKTRVPNCGISQELEPTATCNGHNKTNEADSVCSFPEVYKLKANEKTSKYEKNNHSQKDNRVAETSQKEKMCDNISVTVRKRGRIKLKKLPLSICSFRDQKTHKDDMNNGSSPIPTVQNMGSSPASENVNSHSVDCPTEGVMPIDSTSVWKCQEFKAPLSVKQNKVMQS

Homology

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BLAST of Sed0027819 vs. NCBI nr
Match: XP_022158290.1 (uncharacterized protein LOC111024810 [Momordica charantia])

HSP 1 Score: 561.2 bits (1445), Expect = 6.6e-156
Identity = 311/377 (82.49%), Postives = 332/377 (88.06%), Query Frame = 0


Query: 1   MEAN-CDVNHLDSDALLPPRKRLLAGLRKLGADGDGNFNLTPAASTSCSPPPSPSYGFTS 60
           MEAN CDVNHLD+D LLPPRKRLLAGLRK GADGDG FNL P AS SCSPPPSPSY  TS
Sbjct: 1   MEANICDVNHLDADVLLPPRKRLLAGLRKQGADGDGTFNLPPVASPSCSPPPSPSYATTS 60

Query: 61  IEFNTRLNNLLSAHSNTNLSPEEIVEASRSAAAAAVKAAEAARAAAEEKAAIAAKAVAAA 120
           IEFN RL+NLLSAHSNTNLSPEEIVEASRSAAAAAVKAA++ARAAAEEKAAIAAKAVAAA
Sbjct: 61  IEFNIRLSNLLSAHSNTNLSPEEIVEASRSAAAAAVKAAQSARAAAEEKAAIAAKAVAAA 120

Query: 121 KSAMDLVASISEEAACKETNLRKNKLKKHVPVQFLYTKYQPLENTKTDEELARTLHRTIN 180
           KSAMDLVASISEEAACKE NLRKNKLKKHVPVQ LYTKYQP+EN KTDEELAR LHR IN
Sbjct: 121 KSAMDLVASISEEAACKEINLRKNKLKKHVPVQLLYTKYQPIENCKTDEELARKLHRAIN 180

Query: 181 SSPRISKNSSGSDVRGRRRKRLKTSSGSEKTRVPNCGISQELEPTATCNGHNKTNEADSV 240
           SSPRI+KNSS  DVRG++ K+LK+S GSEKTRV NC ISQEL+PT +CNGH K +EA S 
Sbjct: 181 SSPRITKNSSSPDVRGQKHKKLKSSPGSEKTRVSNCDISQELDPTPSCNGHAKISEASSE 240

Query: 241 CSFPEVYKLKANEKTSKYEKNNHSQKDNRVAETSQKEKMCDNISVTVRKRGRIKLKKLPL 300
           CSF EVYKLKA+EKTSKYEKN  S+ DN  AETS+KEK CD+ISVTV+KRGR+KLKKLPL
Sbjct: 241 CSFREVYKLKADEKTSKYEKNYQSRMDNGEAETSRKEKTCDDISVTVKKRGRVKLKKLPL 300

Query: 301 SICSFRDQKTHKDDMNNGSSPIPTVQNMGSSPASENVNSHSVDCPTEGVMPIDSTSVWKC 360
           SICSFRDQ T K++MNNGSSPI TVQ  G SP SENV  HSV  PTEGVMPIDSTSVWKC
Sbjct: 301 SICSFRDQATLKEEMNNGSSPILTVQKTG-SPTSENVILHSVGSPTEGVMPIDSTSVWKC 360

Query: 361 QEFKAPLSVKQNKVMQS 377
           QEF APLSVKQNKVMQS
Sbjct: 361 QEFNAPLSVKQNKVMQS 376

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BLAST of Sed0027819 vs. NCBI nr
Match: XP_008448452.1 (PREDICTED: uncharacterized protein LOC103490642 [Cucumis melo] >KAA0052909.1 uncharacterized protein E6C27_scaffold344G00150 [Cucumis melo var. makuwa] >TYK11363.1 uncharacterized protein E5676_scaffold139G00150 [Cucumis melo var. makuwa])

HSP 1 Score: 559.7 bits (1441), Expect = 1.9e-155
Identity = 310/377 (82.23%), Postives = 332/377 (88.06%), Query Frame = 0


Query: 1   MEAN-CDVNHLDSDALLPPRKRLLAGLRKLGADGDGNFNLTPAASTSCSPPPSPSYGFTS 60
           ME N CDVNHL+SD LLPPRKRLLAGLRK G DGDG FNL P AS++CSPPPSPSYGFTS
Sbjct: 1   MEGNICDVNHLNSDVLLPPRKRLLAGLRKQGGDGDGTFNLPPVASSTCSPPPSPSYGFTS 60

Query: 61  IEFNTRLNNLLSAHSNTNLSPEEIVEASRSAAAAAVKAAEAARAAAEEKAAIAAKAVAAA 120
           IEFN RLN+LLSAHSN+NLSPEEIVEASRSAAAAAVKAAEAARAAAEEKAAIAA+AV  A
Sbjct: 61  IEFNIRLNSLLSAHSNSNLSPEEIVEASRSAAAAAVKAAEAARAAAEEKAAIAARAVTVA 120

Query: 121 KSAMDLVASISEEAACKETNLRKNKLKKHVPVQFLYTKYQPLENTKTDEELARTLHRTIN 180
           KSAMDLVASISEEAA KE NLRKNKLKKHVPVQFLYTKYQPLENTKTDEELAR LHR IN
Sbjct: 121 KSAMDLVASISEEAAYKEINLRKNKLKKHVPVQFLYTKYQPLENTKTDEELARKLHRAIN 180

Query: 181 SSPRISKNSSGSDVRGRRRKRLKTSSGSEKTRVPNCGISQELEPTATCNGHNKTNEADSV 240
           SSPRI KNSSGSDVR  + K+LK+S+ SEK RV NCGISQ+L+P  TCNGH K+NEADS 
Sbjct: 181 SSPRILKNSSGSDVRSHKHKKLKSSTSSEKIRVSNCGISQDLDPATTCNGHAKSNEADSE 240

Query: 241 CSFPEVYKLKANEKTSKYEKNNHSQKDNRVAETSQKEKMCDNISVTVRKRGRIKLKKLPL 300
           CSF EVYK K +EKTSKYEKNN S  D+   ETSQKEK CD+ISVT++KRGR+KLKKLPL
Sbjct: 241 CSFQEVYKPKPDEKTSKYEKNNQSLTDDG-EETSQKEKTCDDISVTIKKRGRVKLKKLPL 300

Query: 301 SICSFRDQKTHKDDMNNGSSPIPTVQNMGSSPASENVNSHSVDCPTEGVMPIDSTSVWKC 360
           SICSFRD+ T K+DMNNGSSPI TVQNMG SP SE V  HSVD PTEGVMPIDSTSVWKC
Sbjct: 301 SICSFRDKTTLKEDMNNGSSPILTVQNMG-SPTSEKVILHSVDSPTEGVMPIDSTSVWKC 360

Query: 361 QEFKAPLSVKQNKVMQS 377
           QEFKAPLSVKQNKV+QS
Sbjct: 361 QEFKAPLSVKQNKVVQS 375

[Close]

BLAST of Sed0027819 vs. NCBI nr
Match: XP_011650244.1 (uncharacterized protein LOC101214022 [Cucumis sativus] >KGN55595.1 hypothetical protein Csa_009725 [Cucumis sativus])

HSP 1 Score: 558.9 bits (1439), Expect = 3.3e-155
Identity = 310/377 (82.23%), Postives = 331/377 (87.80%), Query Frame = 0


Query: 1   MEAN-CDVNHLDSDALLPPRKRLLAGLRKLGADGDGNFNLTPAASTSCSPPPSPSYGFTS 60
           ME N CDVNHL+SD LLPPRKRLLAGLRK G DGDG FNL P AS+SCSPPPSPSYGFTS
Sbjct: 1   MEGNICDVNHLNSDVLLPPRKRLLAGLRKQGGDGDGTFNLPPVASSSCSPPPSPSYGFTS 60

Query: 61  IEFNTRLNNLLSAHSNTNLSPEEIVEASRSAAAAAVKAAEAARAAAEEKAAIAAKAVAAA 120
           IEFN RLN+LLSAHSN+NLSPEEIV+ASRSAAAAAVKAAEAARAAAEEKAAIAA+AV  A
Sbjct: 61  IEFNIRLNSLLSAHSNSNLSPEEIVQASRSAAAAAVKAAEAARAAAEEKAAIAARAVTVA 120

Query: 121 KSAMDLVASISEEAACKETNLRKNKLKKHVPVQFLYTKYQPLENTKTDEELARTLHRTIN 180
           KSAMDLVASISEEAA KE NLRKNKLKKHVPVQ LYTKYQPLENTKTDEELAR LHR IN
Sbjct: 121 KSAMDLVASISEEAAYKEINLRKNKLKKHVPVQLLYTKYQPLENTKTDEELARKLHRAIN 180

Query: 181 SSPRISKNSSGSDVRGRRRKRLKTSSGSEKTRVPNCGISQELEPTATCNGHNKTNEADSV 240
           SSPRI KNSSGSDVR  + K+LK+S+ SEK RV NCGISQ+L+PT TCNGH K NE DS 
Sbjct: 181 SSPRILKNSSGSDVRSHKHKKLKSSTSSEKIRVSNCGISQDLDPTTTCNGHAKPNEVDSE 240

Query: 241 CSFPEVYKLKANEKTSKYEKNNHSQKDNRVAETSQKEKMCDNISVTVRKRGRIKLKKLPL 300
           CSF EVYKLK +EKTSKYEK+N S  DN   ETSQKEKMCD+ISVT++KRGR+KLKKLPL
Sbjct: 241 CSFQEVYKLKPDEKTSKYEKSNPSLTDNG-EETSQKEKMCDDISVTIKKRGRVKLKKLPL 300

Query: 301 SICSFRDQKTHKDDMNNGSSPIPTVQNMGSSPASENVNSHSVDCPTEGVMPIDSTSVWKC 360
           SICSFRD+ T K+DMNNGSSPI TVQN G SP SE V  HSVD PTEGVMPIDSTSVWKC
Sbjct: 301 SICSFRDKTTLKEDMNNGSSPILTVQNRG-SPTSEKVILHSVDSPTEGVMPIDSTSVWKC 360

Query: 361 QEFKAPLSVKQNKVMQS 377
           QEFKAPLSVKQNKV+QS
Sbjct: 361 QEFKAPLSVKQNKVVQS 375

[Close]

BLAST of Sed0027819 vs. NCBI nr
Match: XP_023540700.1 (uncharacterized protein LOC111800985 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 557.4 bits (1435), Expect = 9.6e-155
Identity = 313/380 (82.37%), Postives = 331/380 (87.11%), Query Frame = 0


Query: 1   MEAN-CDVNHLDSDALLPPRKRLLAGLRKLGADGDGNFNLTPAASTSCSPPPSPSYGFTS 60
           MEAN CDVNHLDSD LLPPRKRLLAGLRK GADGDG FN+ P ASTSCSPPPSPSYGFTS
Sbjct: 1   MEANICDVNHLDSDVLLPPRKRLLAGLRKKGADGDGTFNVPPVASTSCSPPPSPSYGFTS 60

Query: 61  IEFNTRLNNLLSAHSNTNLSPEEIVEASRSAAAAAVKAAEAARAAAEEKAAIAAKAVAAA 120
           IEFN RLNNLLSAHSNTNLSPEEIVEASRSAAAAAVKAAEAAR AAEEKAAIAAKAVAAA
Sbjct: 61  IEFNIRLNNLLSAHSNTNLSPEEIVEASRSAAAAAVKAAEAARTAAEEKAAIAAKAVAAA 120

Query: 121 KSAMDLVASISEEAACKETNLRKNKLKKHVPVQFLYTKYQPLENTKTDEELARTLHRTIN 180
           KSAMDLVASISEEAA KE   RKNKLKKHVPVQFLYTKYQPLENT+TDEE+AR LHR IN
Sbjct: 121 KSAMDLVASISEEAAYKEIKQRKNKLKKHVPVQFLYTKYQPLENTRTDEEMARKLHRAIN 180

Query: 181 SSPRISKNSSGSDVRGRRRKRLKTSSGSEKTRVPNCGISQELEPTATCNGHNKTNEADSV 240
           SSPRI KNSSGSD RG + K+LKTS GSEK  V NCGISQELEPT TCNGH KTNEADS 
Sbjct: 181 SSPRILKNSSGSDARGHKHKKLKTSPGSEKIMVSNCGISQELEPTPTCNGHAKTNEADSE 240

Query: 241 CSFPEVYKLKANEKTSKYEKNNHSQKDNRVAETSQKE-KMCDNISVTVRKRGRIKLKKLP 300
           CSF EVYKLK++EKT KYEKNN SQ D   AETSQKE K CD+I+VT +K+GR+KLKKL 
Sbjct: 241 CSFQEVYKLKSDEKTIKYEKNNQSQMDTGEAETSQKEKKTCDDINVTGKKKGRVKLKKLS 300

Query: 301 LSICSFRDQKTHKDDMNNGSSPIPTVQNMGSSPASENVNSHSVD--CPTEGVMPIDSTSV 360
           LSICSFRDQK  K+DM+NGSSPI  VQN G SP  ENV  HSVD   PT+GV+PIDSTS+
Sbjct: 301 LSICSFRDQKALKEDMDNGSSPILAVQNTG-SPTPENVILHSVDSLSPTQGVLPIDSTSL 360

Query: 361 WKCQEFKAPLSVKQNKVMQS 377
           WKCQEFKAPLSV+QNKVMQS
Sbjct: 361 WKCQEFKAPLSVEQNKVMQS 379

[Close]

BLAST of Sed0027819 vs. NCBI nr
Match: XP_022947836.1 (uncharacterized protein LOC111451593 [Cucurbita moschata])

HSP 1 Score: 557.4 bits (1435), Expect = 9.6e-155
Identity = 313/380 (82.37%), Postives = 331/380 (87.11%), Query Frame = 0


Query: 1   MEAN-CDVNHLDSDALLPPRKRLLAGLRKLGADGDGNFNLTPAASTSCSPPPSPSYGFTS 60
           MEAN CDVNHLDSD LLPPRKRLLAGLRK GADGDG FN+ P ASTSCSPPPSPSYGFTS
Sbjct: 1   MEANICDVNHLDSDVLLPPRKRLLAGLRKKGADGDGTFNVPPVASTSCSPPPSPSYGFTS 60

Query: 61  IEFNTRLNNLLSAHSNTNLSPEEIVEASRSAAAAAVKAAEAARAAAEEKAAIAAKAVAAA 120
           IEFN RLNNLLSAHSNTNLSPEEIVEASRSAAAAAVKAAEAAR AAEEKAAIAAKAVAAA
Sbjct: 61  IEFNIRLNNLLSAHSNTNLSPEEIVEASRSAAAAAVKAAEAARTAAEEKAAIAAKAVAAA 120

Query: 121 KSAMDLVASISEEAACKETNLRKNKLKKHVPVQFLYTKYQPLENTKTDEELARTLHRTIN 180
           KSAMDLVASISEEAA KE   RKNKLKKHVPVQFLYTKYQPLENT+TDEE+AR LHR IN
Sbjct: 121 KSAMDLVASISEEAAYKEIKQRKNKLKKHVPVQFLYTKYQPLENTRTDEEMARKLHRAIN 180

Query: 181 SSPRISKNSSGSDVRGRRRKRLKTSSGSEKTRVPNCGISQELEPTATCNGHNKTNEADSV 240
           SSPRI KNSSGSD RG + K+LKTS GSEK  V NCGISQELEPT TCNGH KTNEADS 
Sbjct: 181 SSPRILKNSSGSDARGHKHKKLKTSPGSEKIMVSNCGISQELEPTPTCNGHAKTNEADSE 240

Query: 241 CSFPEVYKLKANEKTSKYEKNNHSQKDNRVAETSQKE-KMCDNISVTVRKRGRIKLKKLP 300
           CSF EVYKLK++EKT KYEKNN SQ D   AETSQKE K CD+I+VT +K+GR+KLKKL 
Sbjct: 241 CSFQEVYKLKSDEKTIKYEKNNQSQMDTGEAETSQKEKKTCDDINVTGKKKGRVKLKKLS 300

Query: 301 LSICSFRDQKTHKDDMNNGSSPIPTVQNMGSSPASENVNSHSVD--CPTEGVMPIDSTSV 360
           LSICSFRDQK  K+DM+NGSSPI  VQN G SP  ENV  HSVD   PT+GV+PIDSTS+
Sbjct: 301 LSICSFRDQKALKEDMDNGSSPILAVQNTG-SPTPENVILHSVDSPSPTQGVLPIDSTSL 360

Query: 361 WKCQEFKAPLSVKQNKVMQS 377
           WKCQEFKAPLSV+QNKVMQS
Sbjct: 361 WKCQEFKAPLSVEQNKVMQS 379

[Close]

BLAST of Sed0027819 vs. ExPASy TrEMBL
Match: A0A6J1DVF5 (uncharacterized protein LOC111024810 OS=Momordica charantia OX=3673 GN=LOC111024810 PE=4 SV=1)

HSP 1 Score: 561.2 bits (1445), Expect = 3.2e-156
Identity = 311/377 (82.49%), Postives = 332/377 (88.06%), Query Frame = 0


Query: 1   MEAN-CDVNHLDSDALLPPRKRLLAGLRKLGADGDGNFNLTPAASTSCSPPPSPSYGFTS 60
           MEAN CDVNHLD+D LLPPRKRLLAGLRK GADGDG FNL P AS SCSPPPSPSY  TS
Sbjct: 1   MEANICDVNHLDADVLLPPRKRLLAGLRKQGADGDGTFNLPPVASPSCSPPPSPSYATTS 60

Query: 61  IEFNTRLNNLLSAHSNTNLSPEEIVEASRSAAAAAVKAAEAARAAAEEKAAIAAKAVAAA 120
           IEFN RL+NLLSAHSNTNLSPEEIVEASRSAAAAAVKAA++ARAAAEEKAAIAAKAVAAA
Sbjct: 61  IEFNIRLSNLLSAHSNTNLSPEEIVEASRSAAAAAVKAAQSARAAAEEKAAIAAKAVAAA 120

Query: 121 KSAMDLVASISEEAACKETNLRKNKLKKHVPVQFLYTKYQPLENTKTDEELARTLHRTIN 180
           KSAMDLVASISEEAACKE NLRKNKLKKHVPVQ LYTKYQP+EN KTDEELAR LHR IN
Sbjct: 121 KSAMDLVASISEEAACKEINLRKNKLKKHVPVQLLYTKYQPIENCKTDEELARKLHRAIN 180

Query: 181 SSPRISKNSSGSDVRGRRRKRLKTSSGSEKTRVPNCGISQELEPTATCNGHNKTNEADSV 240
           SSPRI+KNSS  DVRG++ K+LK+S GSEKTRV NC ISQEL+PT +CNGH K +EA S 
Sbjct: 181 SSPRITKNSSSPDVRGQKHKKLKSSPGSEKTRVSNCDISQELDPTPSCNGHAKISEASSE 240

Query: 241 CSFPEVYKLKANEKTSKYEKNNHSQKDNRVAETSQKEKMCDNISVTVRKRGRIKLKKLPL 300
           CSF EVYKLKA+EKTSKYEKN  S+ DN  AETS+KEK CD+ISVTV+KRGR+KLKKLPL
Sbjct: 241 CSFREVYKLKADEKTSKYEKNYQSRMDNGEAETSRKEKTCDDISVTVKKRGRVKLKKLPL 300

Query: 301 SICSFRDQKTHKDDMNNGSSPIPTVQNMGSSPASENVNSHSVDCPTEGVMPIDSTSVWKC 360
           SICSFRDQ T K++MNNGSSPI TVQ  G SP SENV  HSV  PTEGVMPIDSTSVWKC
Sbjct: 301 SICSFRDQATLKEEMNNGSSPILTVQKTG-SPTSENVILHSVGSPTEGVMPIDSTSVWKC 360

Query: 361 QEFKAPLSVKQNKVMQS 377
           QEF APLSVKQNKVMQS
Sbjct: 361 QEFNAPLSVKQNKVMQS 376

[Close]

BLAST of Sed0027819 vs. ExPASy TrEMBL
Match: A0A5D3CHI9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00150 PE=4 SV=1)

HSP 1 Score: 559.7 bits (1441), Expect = 9.4e-156
Identity = 310/377 (82.23%), Postives = 332/377 (88.06%), Query Frame = 0


Query: 1   MEAN-CDVNHLDSDALLPPRKRLLAGLRKLGADGDGNFNLTPAASTSCSPPPSPSYGFTS 60
           ME N CDVNHL+SD LLPPRKRLLAGLRK G DGDG FNL P AS++CSPPPSPSYGFTS
Sbjct: 1   MEGNICDVNHLNSDVLLPPRKRLLAGLRKQGGDGDGTFNLPPVASSTCSPPPSPSYGFTS 60

Query: 61  IEFNTRLNNLLSAHSNTNLSPEEIVEASRSAAAAAVKAAEAARAAAEEKAAIAAKAVAAA 120
           IEFN RLN+LLSAHSN+NLSPEEIVEASRSAAAAAVKAAEAARAAAEEKAAIAA+AV  A
Sbjct: 61  IEFNIRLNSLLSAHSNSNLSPEEIVEASRSAAAAAVKAAEAARAAAEEKAAIAARAVTVA 120

Query: 121 KSAMDLVASISEEAACKETNLRKNKLKKHVPVQFLYTKYQPLENTKTDEELARTLHRTIN 180
           KSAMDLVASISEEAA KE NLRKNKLKKHVPVQFLYTKYQPLENTKTDEELAR LHR IN
Sbjct: 121 KSAMDLVASISEEAAYKEINLRKNKLKKHVPVQFLYTKYQPLENTKTDEELARKLHRAIN 180

Query: 181 SSPRISKNSSGSDVRGRRRKRLKTSSGSEKTRVPNCGISQELEPTATCNGHNKTNEADSV 240
           SSPRI KNSSGSDVR  + K+LK+S+ SEK RV NCGISQ+L+P  TCNGH K+NEADS 
Sbjct: 181 SSPRILKNSSGSDVRSHKHKKLKSSTSSEKIRVSNCGISQDLDPATTCNGHAKSNEADSE 240

Query: 241 CSFPEVYKLKANEKTSKYEKNNHSQKDNRVAETSQKEKMCDNISVTVRKRGRIKLKKLPL 300
           CSF EVYK K +EKTSKYEKNN S  D+   ETSQKEK CD+ISVT++KRGR+KLKKLPL
Sbjct: 241 CSFQEVYKPKPDEKTSKYEKNNQSLTDDG-EETSQKEKTCDDISVTIKKRGRVKLKKLPL 300

Query: 301 SICSFRDQKTHKDDMNNGSSPIPTVQNMGSSPASENVNSHSVDCPTEGVMPIDSTSVWKC 360
           SICSFRD+ T K+DMNNGSSPI TVQNMG SP SE V  HSVD PTEGVMPIDSTSVWKC
Sbjct: 301 SICSFRDKTTLKEDMNNGSSPILTVQNMG-SPTSEKVILHSVDSPTEGVMPIDSTSVWKC 360

Query: 361 QEFKAPLSVKQNKVMQS 377
           QEFKAPLSVKQNKV+QS
Sbjct: 361 QEFKAPLSVKQNKVVQS 375

[Close]

BLAST of Sed0027819 vs. ExPASy TrEMBL
Match: A0A1S3BJP5 (uncharacterized protein LOC103490642 OS=Cucumis melo OX=3656 GN=LOC103490642 PE=4 SV=1)

HSP 1 Score: 559.7 bits (1441), Expect = 9.4e-156
Identity = 310/377 (82.23%), Postives = 332/377 (88.06%), Query Frame = 0


Query: 1   MEAN-CDVNHLDSDALLPPRKRLLAGLRKLGADGDGNFNLTPAASTSCSPPPSPSYGFTS 60
           ME N CDVNHL+SD LLPPRKRLLAGLRK G DGDG FNL P AS++CSPPPSPSYGFTS
Sbjct: 1   MEGNICDVNHLNSDVLLPPRKRLLAGLRKQGGDGDGTFNLPPVASSTCSPPPSPSYGFTS 60

Query: 61  IEFNTRLNNLLSAHSNTNLSPEEIVEASRSAAAAAVKAAEAARAAAEEKAAIAAKAVAAA 120
           IEFN RLN+LLSAHSN+NLSPEEIVEASRSAAAAAVKAAEAARAAAEEKAAIAA+AV  A
Sbjct: 61  IEFNIRLNSLLSAHSNSNLSPEEIVEASRSAAAAAVKAAEAARAAAEEKAAIAARAVTVA 120

Query: 121 KSAMDLVASISEEAACKETNLRKNKLKKHVPVQFLYTKYQPLENTKTDEELARTLHRTIN 180
           KSAMDLVASISEEAA KE NLRKNKLKKHVPVQFLYTKYQPLENTKTDEELAR LHR IN
Sbjct: 121 KSAMDLVASISEEAAYKEINLRKNKLKKHVPVQFLYTKYQPLENTKTDEELARKLHRAIN 180

Query: 181 SSPRISKNSSGSDVRGRRRKRLKTSSGSEKTRVPNCGISQELEPTATCNGHNKTNEADSV 240
           SSPRI KNSSGSDVR  + K+LK+S+ SEK RV NCGISQ+L+P  TCNGH K+NEADS 
Sbjct: 181 SSPRILKNSSGSDVRSHKHKKLKSSTSSEKIRVSNCGISQDLDPATTCNGHAKSNEADSE 240

Query: 241 CSFPEVYKLKANEKTSKYEKNNHSQKDNRVAETSQKEKMCDNISVTVRKRGRIKLKKLPL 300
           CSF EVYK K +EKTSKYEKNN S  D+   ETSQKEK CD+ISVT++KRGR+KLKKLPL
Sbjct: 241 CSFQEVYKPKPDEKTSKYEKNNQSLTDDG-EETSQKEKTCDDISVTIKKRGRVKLKKLPL 300

Query: 301 SICSFRDQKTHKDDMNNGSSPIPTVQNMGSSPASENVNSHSVDCPTEGVMPIDSTSVWKC 360
           SICSFRD+ T K+DMNNGSSPI TVQNMG SP SE V  HSVD PTEGVMPIDSTSVWKC
Sbjct: 301 SICSFRDKTTLKEDMNNGSSPILTVQNMG-SPTSEKVILHSVDSPTEGVMPIDSTSVWKC 360

Query: 361 QEFKAPLSVKQNKVMQS 377
           QEFKAPLSVKQNKV+QS
Sbjct: 361 QEFKAPLSVKQNKVVQS 375

[Close]

BLAST of Sed0027819 vs. ExPASy TrEMBL
Match: A0A0A0L0X5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G000190 PE=4 SV=1)

HSP 1 Score: 558.9 bits (1439), Expect = 1.6e-155
Identity = 310/377 (82.23%), Postives = 331/377 (87.80%), Query Frame = 0


Query: 1   MEAN-CDVNHLDSDALLPPRKRLLAGLRKLGADGDGNFNLTPAASTSCSPPPSPSYGFTS 60
           ME N CDVNHL+SD LLPPRKRLLAGLRK G DGDG FNL P AS+SCSPPPSPSYGFTS
Sbjct: 1   MEGNICDVNHLNSDVLLPPRKRLLAGLRKQGGDGDGTFNLPPVASSSCSPPPSPSYGFTS 60

Query: 61  IEFNTRLNNLLSAHSNTNLSPEEIVEASRSAAAAAVKAAEAARAAAEEKAAIAAKAVAAA 120
           IEFN RLN+LLSAHSN+NLSPEEIV+ASRSAAAAAVKAAEAARAAAEEKAAIAA+AV  A
Sbjct: 61  IEFNIRLNSLLSAHSNSNLSPEEIVQASRSAAAAAVKAAEAARAAAEEKAAIAARAVTVA 120

Query: 121 KSAMDLVASISEEAACKETNLRKNKLKKHVPVQFLYTKYQPLENTKTDEELARTLHRTIN 180
           KSAMDLVASISEEAA KE NLRKNKLKKHVPVQ LYTKYQPLENTKTDEELAR LHR IN
Sbjct: 121 KSAMDLVASISEEAAYKEINLRKNKLKKHVPVQLLYTKYQPLENTKTDEELARKLHRAIN 180

Query: 181 SSPRISKNSSGSDVRGRRRKRLKTSSGSEKTRVPNCGISQELEPTATCNGHNKTNEADSV 240
           SSPRI KNSSGSDVR  + K+LK+S+ SEK RV NCGISQ+L+PT TCNGH K NE DS 
Sbjct: 181 SSPRILKNSSGSDVRSHKHKKLKSSTSSEKIRVSNCGISQDLDPTTTCNGHAKPNEVDSE 240

Query: 241 CSFPEVYKLKANEKTSKYEKNNHSQKDNRVAETSQKEKMCDNISVTVRKRGRIKLKKLPL 300
           CSF EVYKLK +EKTSKYEK+N S  DN   ETSQKEKMCD+ISVT++KRGR+KLKKLPL
Sbjct: 241 CSFQEVYKLKPDEKTSKYEKSNPSLTDNG-EETSQKEKMCDDISVTIKKRGRVKLKKLPL 300

Query: 301 SICSFRDQKTHKDDMNNGSSPIPTVQNMGSSPASENVNSHSVDCPTEGVMPIDSTSVWKC 360
           SICSFRD+ T K+DMNNGSSPI TVQN G SP SE V  HSVD PTEGVMPIDSTSVWKC
Sbjct: 301 SICSFRDKTTLKEDMNNGSSPILTVQNRG-SPTSEKVILHSVDSPTEGVMPIDSTSVWKC 360

Query: 361 QEFKAPLSVKQNKVMQS 377
           QEFKAPLSVKQNKV+QS
Sbjct: 361 QEFKAPLSVKQNKVVQS 375

[Close]

BLAST of Sed0027819 vs. ExPASy TrEMBL
Match: A0A6J1G7K8 (uncharacterized protein LOC111451593 OS=Cucurbita moschata OX=3662 GN=LOC111451593 PE=4 SV=1)

HSP 1 Score: 557.4 bits (1435), Expect = 4.6e-155
Identity = 313/380 (82.37%), Postives = 331/380 (87.11%), Query Frame = 0


Query: 1   MEAN-CDVNHLDSDALLPPRKRLLAGLRKLGADGDGNFNLTPAASTSCSPPPSPSYGFTS 60
           MEAN CDVNHLDSD LLPPRKRLLAGLRK GADGDG FN+ P ASTSCSPPPSPSYGFTS
Sbjct: 1   MEANICDVNHLDSDVLLPPRKRLLAGLRKKGADGDGTFNVPPVASTSCSPPPSPSYGFTS 60

Query: 61  IEFNTRLNNLLSAHSNTNLSPEEIVEASRSAAAAAVKAAEAARAAAEEKAAIAAKAVAAA 120
           IEFN RLNNLLSAHSNTNLSPEEIVEASRSAAAAAVKAAEAAR AAEEKAAIAAKAVAAA
Sbjct: 61  IEFNIRLNNLLSAHSNTNLSPEEIVEASRSAAAAAVKAAEAARTAAEEKAAIAAKAVAAA 120

Query: 121 KSAMDLVASISEEAACKETNLRKNKLKKHVPVQFLYTKYQPLENTKTDEELARTLHRTIN 180
           KSAMDLVASISEEAA KE   RKNKLKKHVPVQFLYTKYQPLENT+TDEE+AR LHR IN
Sbjct: 121 KSAMDLVASISEEAAYKEIKQRKNKLKKHVPVQFLYTKYQPLENTRTDEEMARKLHRAIN 180

Query: 181 SSPRISKNSSGSDVRGRRRKRLKTSSGSEKTRVPNCGISQELEPTATCNGHNKTNEADSV 240
           SSPRI KNSSGSD RG + K+LKTS GSEK  V NCGISQELEPT TCNGH KTNEADS 
Sbjct: 181 SSPRILKNSSGSDARGHKHKKLKTSPGSEKIMVSNCGISQELEPTPTCNGHAKTNEADSE 240

Query: 241 CSFPEVYKLKANEKTSKYEKNNHSQKDNRVAETSQKE-KMCDNISVTVRKRGRIKLKKLP 300
           CSF EVYKLK++EKT KYEKNN SQ D   AETSQKE K CD+I+VT +K+GR+KLKKL 
Sbjct: 241 CSFQEVYKLKSDEKTIKYEKNNQSQMDTGEAETSQKEKKTCDDINVTGKKKGRVKLKKLS 300

Query: 301 LSICSFRDQKTHKDDMNNGSSPIPTVQNMGSSPASENVNSHSVD--CPTEGVMPIDSTSV 360
           LSICSFRDQK  K+DM+NGSSPI  VQN G SP  ENV  HSVD   PT+GV+PIDSTS+
Sbjct: 301 LSICSFRDQKALKEDMDNGSSPILAVQNTG-SPTPENVILHSVDSPSPTQGVLPIDSTSL 360

Query: 361 WKCQEFKAPLSVKQNKVMQS 377
           WKCQEFKAPLSV+QNKVMQS
Sbjct: 361 WKCQEFKAPLSVEQNKVMQS 379

[Close]

BLAST of Sed0027819 vs. TAIR 10
Match: AT4G35510.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G17540.3); Has 182 Blast hits to 179 proteins in 73 species: Archae - 0; Bacteria - 87; Metazoa - 17; Fungi - 9; Plants - 50; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). )

HSP 1 Score: 180.3 bits (456), Expect = 3.0e-45
Identity = 150/382 (39.27%), Postives = 218/382 (57.07%), Query Frame = 0


Query: 1   MEAN-CDVNHLDSDALLPPRKRLLAGLRKLGADG-DGNFNLTPAASTSCSPPPSPSYGFT 60
           ME N CD+N LDSD+ LPPRKRLLAG +K  ++G +G+     A+S+S S     S   T
Sbjct: 1   METNPCDMNQLDSDSHLPPRKRLLAGFKKFNSNGINGSSPSDFASSSSTSNSNGSSSAST 60

Query: 61  SIEFNTRLNNLLSAHSNTNLSPEEIVEASRSAAAAAVKAAEAARAAAEEKAAIAAKAVAA 120
           +++  T L NLLS+  N + SPEE+VEA+RSAAA AVKAA+AARA A EKA I+AKA+AA
Sbjct: 61  NVQ--THLGNLLSSPFNNDQSPEELVEATRSAAALAVKAAKAARAIANEKALISAKAIAA 120

Query: 121 AKSAMDLVASISEEAA--CKETNLRKNKLKKHVPVQFLYTKYQPLENTKTDEELARTLHR 180
           AK A++LV S  +EA   CKE + RKNK KKHVPV+ LY+K Q  +    +++LAR LHR
Sbjct: 121 AKRALELVDSFPKEAMADCKERSPRKNKQKKHVPVELLYSKGQLRDE---EDDLARRLHR 180

Query: 181 TIN--SSPRISKNSSGSDVRGRRRKRLKTSSGSEKTRVPNCGISQELEPTATCNGHNKTN 240
            I+  S PR+ + S  +  R +++K+ K+      + +   G  +++             
Sbjct: 181 AIDNTSYPRVLRTSEENGQRYKKQKKNKSVVEGGSSSIIVTGSMKDI-----------AG 240

Query: 241 EADSVCSFPEVYKLKANEKTSKYEKNNHSQKDNRVAETSQKEKMCDNISVTVRKRGRIKL 300
             DS  S+  +          +  ++N  + D+ +      EK  +  +  V++RGR+KL
Sbjct: 241 VVDSDSSYEGL----------EIARSNRDEADSML----MMEKSGEESNSLVKRRGRVKL 300

Query: 301 KKLPLSICSFRDQKTHKDDMNNGSSPIPTVQNMGSSPASENVNSHSVDCPTEGVMPIDST 360
           KKLPLSIC+ R+Q    ++  + +SP+P  Q      A               +  I  +
Sbjct: 301 KKLPLSICNSRNQ----ENGTSSASPLPVAQPQEDGGA---------------ITVIAGS 333

Query: 361 SVWKCQEFKAPLSVKQNKVMQS 377
           S WKCQ+ KAP  VKQNK ++S
Sbjct: 361 SSWKCQDIKAPECVKQNKAVRS 333

[Close]

BLAST of Sed0027819 vs. TAIR 10
Match: AT2G17540.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G35510.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 95.5 bits (236), Expect = 9.6e-20
Identity = 117/370 (31.62%), Postives = 166/370 (44.86%), Query Frame = 0


Query: 10  LDSDALLPPRKRLLAGLRKLGADGDGNFNLTPAASTSCSPPPSPSYGFTSIEFNTRLNNL 69
           L+SD+LLPPRKRLLAG +   +         P AS+S S   S     +++     L++L
Sbjct: 7   LESDSLLPPRKRLLAGFKNQNSRISNESPSPPFASSSSSTTTSNGSSASAVVHTHHLDHL 66

Query: 70  LSAHSNTNLSPEEIVEASRSAAAAAVKAAEAARAAAEEKAAIAAKAVAAAKSAMDLVASI 129
           L+  +    SPEE+ +AS++ AA AVK A+AARA A EKA IA+KAVAAAK+A++L AS 
Sbjct: 67  LNDQTR---SPEELAQASKATAALAVKVAKAARATANEKAIIASKAVAAAKNALELFASF 126

Query: 130 --SEEAACKETNLRKNKLKKHVPVQFLYTKYQPLENTKTDEELARTLHRTINSSPRISKN 189
             +E  +CKE                                    L R IN+SPR+   
Sbjct: 127 PAAETVSCKEPR----------------------------------LIRAINNSPRVL-- 186

Query: 190 SSGSDVRGRRRKRLKTSSGSEKTRVPNCGISQELEPTATCN-GHNKTNEADSVCSFPEVY 249
              +D  G R K+ KT                    T+T N G++     DS        
Sbjct: 187 ---TDCSGHRNKKQKTL-------------------TSTMNDGNDVAGVVDS-------- 246

Query: 250 KLKANEKTSKYEKNNHSQKDNRVAETSQKEKMCDNISVTVRKRGRIKLKKLPLSICSFRD 309
                      +          + + + KEK  +  S   ++RGR+   KLPLS+C+++D
Sbjct: 247 -----------DDGTRVNGKLLLCDNTLKEKTEEESSSLGKRRGRV---KLPLSMCAYKD 275

Query: 310 QKTHKDDMNNGSSPIPTVQNMGSSPASENVNSHSVDCPTEGVMPIDSTSVWKCQEFKAPL 369
           Q+       NG   I   +N  S   SE  N         GV  +     WKCQ+ K+P 
Sbjct: 307 QE-------NG---ITLEENNLSVSKSEGYNG--------GVAQVIERPSWKCQDLKSPE 275

Query: 370 SVKQNKVMQS 377
            VKQNKV++S
Sbjct: 367 CVKQNKVVRS 275

[Close]

BLAST of Sed0027819 vs. TAIR 10
Match: AT2G17540.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G35510.1); Has 39 Blast hits to 39 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 95.5 bits (236), Expect = 9.6e-20
Identity = 117/370 (31.62%), Postives = 166/370 (44.86%), Query Frame = 0


Query: 10  LDSDALLPPRKRLLAGLRKLGADGDGNFNLTPAASTSCSPPPSPSYGFTSIEFNTRLNNL 69
           L+SD+LLPPRKRLLAG +   +         P AS+S S   S     +++     L++L
Sbjct: 7   LESDSLLPPRKRLLAGFKNQNSRISNESPSPPFASSSSSTTTSNGSSASAVVHTHHLDHL 66

Query: 70  LSAHSNTNLSPEEIVEASRSAAAAAVKAAEAARAAAEEKAAIAAKAVAAAKSAMDLVASI 129
           L+  +    SPEE+ +AS++ AA AVK A+AARA A EKA IA+KAVAAAK+A++L AS 
Sbjct: 67  LNDQTR---SPEELAQASKATAALAVKVAKAARATANEKAIIASKAVAAAKNALELFASF 126

Query: 130 --SEEAACKETNLRKNKLKKHVPVQFLYTKYQPLENTKTDEELARTLHRTINSSPRISKN 189
             +E  +CKE                                    L R IN+SPR+   
Sbjct: 127 PAAETVSCKEPR----------------------------------LIRAINNSPRVL-- 186

Query: 190 SSGSDVRGRRRKRLKTSSGSEKTRVPNCGISQELEPTATCN-GHNKTNEADSVCSFPEVY 249
              +D  G R K+ KT                    T+T N G++     DS        
Sbjct: 187 ---TDCSGHRNKKQKTL-------------------TSTMNDGNDVAGVVDS-------- 246

Query: 250 KLKANEKTSKYEKNNHSQKDNRVAETSQKEKMCDNISVTVRKRGRIKLKKLPLSICSFRD 309
                      +          + + + KEK  +  S   ++RGR+   KLPLS+C+++D
Sbjct: 247 -----------DDGTRVNGKLLLCDNTLKEKTEEESSSLGKRRGRV---KLPLSMCAYKD 275

Query: 310 QKTHKDDMNNGSSPIPTVQNMGSSPASENVNSHSVDCPTEGVMPIDSTSVWKCQEFKAPL 369
           Q+       NG   I   +N  S   SE  N         GV  +     WKCQ+ K+P 
Sbjct: 307 QE-------NG---ITLEENNLSVSKSEGYNG--------GVAQVIERPSWKCQDLKSPE 275

Query: 370 SVKQNKVMQS 377
            VKQNKV++S
Sbjct: 367 CVKQNKVVRS 275

[Close]

BLAST of Sed0027819 vs. TAIR 10
Match: AT2G17540.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G35510.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 95.5 bits (236), Expect = 9.6e-20
Identity = 117/370 (31.62%), Postives = 166/370 (44.86%), Query Frame = 0


Query: 10  LDSDALLPPRKRLLAGLRKLGADGDGNFNLTPAASTSCSPPPSPSYGFTSIEFNTRLNNL 69
           L+SD+LLPPRKRLLAG +   +         P AS+S S   S     +++     L++L
Sbjct: 7   LESDSLLPPRKRLLAGFKNQNSRISNESPSPPFASSSSSTTTSNGSSASAVVHTHHLDHL 66

Query: 70  LSAHSNTNLSPEEIVEASRSAAAAAVKAAEAARAAAEEKAAIAAKAVAAAKSAMDLVASI 129
           L+  +    SPEE+ +AS++ AA AVK A+AARA A EKA IA+KAVAAAK+A++L AS 
Sbjct: 67  LNDQTR---SPEELAQASKATAALAVKVAKAARATANEKAIIASKAVAAAKNALELFASF 126

Query: 130 --SEEAACKETNLRKNKLKKHVPVQFLYTKYQPLENTKTDEELARTLHRTINSSPRISKN 189
             +E  +CKE                                    L R IN+SPR+   
Sbjct: 127 PAAETVSCKEPR----------------------------------LIRAINNSPRVL-- 186

Query: 190 SSGSDVRGRRRKRLKTSSGSEKTRVPNCGISQELEPTATCN-GHNKTNEADSVCSFPEVY 249
              +D  G R K+ KT                    T+T N G++     DS        
Sbjct: 187 ---TDCSGHRNKKQKTL-------------------TSTMNDGNDVAGVVDS-------- 246

Query: 250 KLKANEKTSKYEKNNHSQKDNRVAETSQKEKMCDNISVTVRKRGRIKLKKLPLSICSFRD 309
                      +          + + + KEK  +  S   ++RGR+   KLPLS+C+++D
Sbjct: 247 -----------DDGTRVNGKLLLCDNTLKEKTEEESSSLGKRRGRV---KLPLSMCAYKD 275

Query: 310 QKTHKDDMNNGSSPIPTVQNMGSSPASENVNSHSVDCPTEGVMPIDSTSVWKCQEFKAPL 369
           Q+       NG   I   +N  S   SE  N         GV  +     WKCQ+ K+P 
Sbjct: 307 QE-------NG---ITLEENNLSVSKSEGYNG--------GVAQVIERPSWKCQDLKSPE 275

Query: 370 SVKQNKVMQS 377
            VKQNKV++S
Sbjct: 367 CVKQNKVVRS 275

[Close]

BLAST of Sed0027819 vs. TAIR 10
Match: AT5G66000.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G17540.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 60.8 bits (146), Expect = 2.6e-09
Identity = 73/179 (40.78%), Postives = 104/179 (58.10%), Query Frame = 0


Query: 51  PSPSYGFTSIEFNTRLNNLLSAH-SNTNLSPEEIVEASRSAAAAAVKAAEAARAAAEEKA 110
           P PS   T+++++  L+ LL++H SN +L+P+EI +ASR  AAAA  AA+AARA A+EKA
Sbjct: 17  PHPS---TNVDYH--LSILLASHLSNPDLTPQEIADASRCTAAAAAIAAKAARATADEKA 76

Query: 111 AIAAKAVAAAKSAMDLVASI-SEEAACKETNLRKNK--LKKHVPVQFLYTKYQPLENTKT 170
           A AAKAVAAAK+A+DL+AS    +   ++  L K+K   KKHV    L++K   L +   
Sbjct: 77  AAAAKAVAAAKTALDLIASFPPNQGLVQDACLHKDKKMKKKHVAADLLFSKDDALPSKL- 136

Query: 171 DEELARTLHRTINSSPRIS---KNSSGSDVRGRRRKRLKTSSGSEKTRVPNCGISQELE 223
             +L   + + I S+   S   KN     V    R+RL T     K RV   G+  EL+
Sbjct: 137 --QLGGVVSQGIVSNSSSSCQHKNDDQCAVPTCSRERLNTEHAVSK-RVEFDGLGMELD 186

The following BLAST results are available for this feature:

BLAST of Sed0027819 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158290.1	6.6e-156	82.49	uncharacterized protein LOC111024810 [Momordica charantia]	[more]
XP_008448452.1	1.9e-155	82.23	PREDICTED: uncharacterized protein LOC103490642 [Cucumis melo] >KAA0052909.1 unc...	[more]
XP_011650244.1	3.3e-155	82.23	uncharacterized protein LOC101214022 [Cucumis sativus] >KGN55595.1 hypothetical ...	[more]
XP_023540700.1	9.6e-155	82.37	uncharacterized protein LOC111800985 [Cucurbita pepo subsp. pepo]	[more]
XP_022947836.1	9.6e-155	82.37	uncharacterized protein LOC111451593 [Cucurbita moschata]	[more]

BLAST of Sed0027819 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0027819 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DVF5	3.2e-156	82.49	uncharacterized protein LOC111024810 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A5D3CHI9	9.4e-156	82.23	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BJP5	9.4e-156	82.23	uncharacterized protein LOC103490642 OS=Cucumis melo OX=3656 GN=LOC103490642 PE=...	[more]
A0A0A0L0X5	1.6e-155	82.23	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G000190 PE=4 SV=1	[more]
A0A6J1G7K8	4.6e-155	82.37	uncharacterized protein LOC111451593 OS=Cucurbita moschata OX=3662 GN=LOC1114515...	[more]

BLAST of Sed0027819 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35510.1	3.0e-45	39.27	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G17540.2	9.6e-20	31.62	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G17540.1	9.6e-20	31.62	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G17540.3	9.6e-20	31.62	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G66000.1	2.6e-09	40.78	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 88..115
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 308..339
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..215
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 253..274
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 314..339
None	No IPR available	PANTHER	PTHR35477:SF1	OS06G0728500 PROTEIN	coord: 1..376
None	No IPR available	PANTHER	PTHR35477	OS06G0728500 PROTEIN	coord: 1..376

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0027819.1	Sed0027819.1	mRNA
Sed0027819.2	Sed0027819.2	mRNA
Sed0027819.3	Sed0027819.3	mRNA
Sed0027819.4	Sed0027819.4	mRNA
Sed0027819.5	Sed0027819.5	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane