Sed0027817 (gene) Chayote v1

Overview


Name	Sed0027817
Type	gene
Organism	Sechium edule (Chayote v1)
Description	bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase
Location	LG05: 6721472 .. 6724010 (-)
RNA-Seq Expression	Sed0027817
Synteny	Sed0027817

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTCTTCTTCCTGCGAAAAGAAAAAGCTGAAAAAGTTTGGAATTGTTGAAGATTTAGAAACAAACTTGCAACTTAAGAGAGCTTCTTCTGAATATTGATTTGGGTTTTTGAATTTTCGATTCCGAATATTAATCAATATCGATAAATCCCAAAATTCATACATCACATTAATAATTCAGCGTAGAAACCAAAAGCGACATATTAGTTTAAAATTTACCCACACATGACACACATATAATTTATAAATATCTTTAATTTTTTAAAAATTTTAATTCTAGTGTATATATTCGTATAAATCGATTCCTTTGATCCAAATCTATAACCCCCCCTCCCATTTCGTCTGAATTCCTTTGTTCTTCAGCCATGGGTTCAGTCGCTTCGCTCAAGTTCTTGATTTACGGTCGGACCGGCTGGATCGGAGGTTTGCTCGGCCAGCTCTGTGAACAACAGGGGATCGATTTCGCTTACGGGTCGGGCCGGCTCGAGAACCGGGTCGCCGTCGAGGCCGACATTGCCGCCGTGAAGCCCACCCACGTGTTCAACGCCGCCGGCGTCACCGGCCGCCCCAACGTGGACTGGTGCGAATCGCATAAGGTCGAGACCATCAGAACCAATGTGGTCGGGACCTTGAGCTTGGCCGATGTGTGCCGTGAGCGAGGTTTGATCTTGATTAATTACGCCACTGGGTGCATTTTCGAGTACGATTCTTCGCATCCGCTCAATTCCGGGGTTGGATTTAAGGAGGATGAAACCCCTAATTTTATTGGGTCCTTTTATTCCAAGACGAAAGCCATGGTGAGCTTTAGGTTTTTACTGCTTCATTGTTTTTATTATCATTGGTGTTATTGATTGATTTTGGGATTCTGTTGGAGCTTAGAGCTGTGTGTTTTTTAGATGCATCCTGAAATTTGATTGTGGATCTGTGATTACAGAGTTCATTTTTTTTTTTTTTTTTGAGAAACCTGTGATTACAGAGTTAATGGTTCTGTTTAGAGAAATCACTGTTGAAATTAATCATGGGGAGGTGTAATTAATCATGGGGAGGTGTTTGAATGAGTAGTTAGTTTGAGGTGTCATTTTGAGTAATTAGAAAATTGAGATTTTTGTAATAGTCGTAGATTTTTACGGAGGAGTTGCCGTAAAAAAATCGTTTGGATGTATTTTTTTTATTGATGAGTTTGAGACAATAGTTTGTTTGGATCTAAATTTGAAATGAGCAATTATTTTGAGTGATTAAAAATGAATGATTAGAAATGAGTAGTAAGAAATAAGTTATTTTGAGTAGTTGGAAGTGAATGATTCGAAATTAGTGATTAAAAATGAGGAGTTATTTTGAGTTGTTAGAAACGAATGATTAGAAATAAGTGGTTAGAAGTGAAAAGTTAGTTGTAACTGTTTAAAAATGAGGAGTTATTTTGAGTAGTTACATGAACTCGTTTGAATGTAGTTTTTTGAGGAGTAGTTAGTAAATGCCCAATCTAAATCCTCTTTAAATTTGACAAACAAATACTCCCAAAATGTTTTAGGATGGATTTTTTCTTGGTGTAGTTTGTGAATTTTAGATCTGGATTGTTATTACTTTTATTGGAATTGAACCGATTCAAGCAGCATTGTACTTGTTTGTCTTGAATTCCTAATCATTATATGACATTTTGATGAGAATGTATCAAATTTGTTCTTTGAATCTGATGGGCTAATTTTTATTTTATGTCACGTTCAAATTTTGGGGTTAAAAAGGTGGAGGATCTGCTGAAAAACTATGAGAATGTGTGCACCTTGCGCGTTAGGATGCCGATATCCTCTGATTTATCGAATCCTCGCAACTTCATTACGAAGATAACTAGATATGAGAAGGTTGTCGACATACCAAACTCGATGTCGATCTTGGACGAACTCCTCCCGATCTCGATTGAAATGGCAAAAAGAAACCTCACTGGAATATATAACTTCACCAATCCAGGAGTGGTGAGCCACAATGAGATCTTGGAGATGTACAAGCAATTCATTGACCCCAGTTTCACCTGGAAGAACTTCACTTTGGAGGAGCAAGCCAAAGTGATCGTGGCCCCTCGGAGCAACAACGAGCTCGATGCGAGCAAGTTGAAGAAGGAATTCCCTGAACTCATGTCCATCAAAGAATCTCTGGTCAAGTATGTCTTCAAGCCAAATCAGAAAACTTCTGCAGCTTAAGATTATTGGTATTTCTGTTCCTATCTTTTACCTTCTTTGTATTTTTCATTCTGCAGCTTAAAATCATTGTATTTGTAAGTTTTGAATTTACGACAAAGAAACTTGATTATTATCCATATTTGAATTGCCAAATCTATTATTTTGTTGGTATGGTACCTTGAAATGGTCTGGAGAGCCAGTTTGAACTTAGCCCATGTGTCACCTAACAAGTTGCTGAGCTTTGGTAATTTGTATCCTTGCTGATTTGGGTATTAGATTTTACTTTGAACTTTTGTGCATTATTGGTAATTTATTTTTTTGAATGCGATGAAAATGGAGACCAGTATTATTCGGACGAGTTTTAGCGGG

mRNA sequence

GTTTCTTCTTCCTGCGAAAAGAAAAAGCTGAAAAAGTTTGGAATTGTTGAAGATTTAGAAACAAACTTGCAACTTAAGAGAGCTTCTTCTGAATATTGATTTGGGTTTTTGAATTTTCGATTCCGAATATTAATCAATATCGATAAATCCCAAAATTCATACATCACATTAATAATTCAGCGTAGAAACCAAAAGCGACATATTAGTTTAAAATTTACCCACACATGACACACATATAATTTATAAATATCTTTAATTTTTTAAAAATTTTAATTCTAGTGTATATATTCGTATAAATCGATTCCTTTGATCCAAATCTATAACCCCCCCTCCCATTTCGTCTGAATTCCTTTGTTCTTCAGCCATGGGTTCAGTCGCTTCGCTCAAGTTCTTGATTTACGGTCGGACCGGCTGGATCGGAGGTTTGCTCGGCCAGCTCTGTGAACAACAGGGGATCGATTTCGCTTACGGGTCGGGCCGGCTCGAGAACCGGGTCGCCGTCGAGGCCGACATTGCCGCCGTGAAGCCCACCCACGTGTTCAACGCCGCCGGCGTCACCGGCCGCCCCAACGTGGACTGGTGCGAATCGCATAAGGTCGAGACCATCAGAACCAATGTGGTCGGGACCTTGAGCTTGGCCGATGTGTGCCGTGAGCGAGGTTTGATCTTGATTAATTACGCCACTGGGTGCATTTTCGAGTACGATTCTTCGCATCCGCTCAATTCCGGGGTTGGATTTAAGGAGGATGAAACCCCTAATTTTATTGGGTCCTTTTATTCCAAGACGAAAGCCATGGTGGAGGATCTGCTGAAAAACTATGAGAATGTGTGCACCTTGCGCGTTAGGATGCCGATATCCTCTGATTTATCGAATCCTCGCAACTTCATTACGAAGATAACTAGATATGAGAAGGTTGTCGACATACCAAACTCGATGTCGATCTTGGACGAACTCCTCCCGATCTCGATTGAAATGGCAAAAAGAAACCTCACTGGAATATATAACTTCACCAATCCAGGAGTGGTGAGCCACAATGAGATCTTGGAGATGTACAAGCAATTCATTGACCCCAGTTTCACCTGGAAGAACTTCACTTTGGAGGAGCAAGCCAAAGTGATCGTGGCCCCTCGGAGCAACAACGAGCTCGATGCGAGCAAGTTGAAGAAGGAATTCCCTGAACTCATGTCCATCAAAGAATCTCTGGTCAAGTATGTCTTCAAGCCAAATCAGAAAACTTCTGCAGCTTAAGATTATTGGTATTTCTGTTCCTATCTTTTACCTTCTTTGTATTTTTCATTCTGCAGCTTAAAATCATTGTATTTGTAAGTTTTGAATTTACGACAAAGAAACTTGATTATTATCCATATTTGAATTGCCAAATCTATTATTTTGTTGGTATGGTACCTTGAAATGGTCTGGAGAGCCAGTTTGAACTTAGCCCATGTGTCACCTAACAAGTTGCTGAGCTTTGGTAATTTGTATCCTTGCTGATTTGGGTATTAGATTTTACTTTGAACTTTTGTGCATTATTGGTAATTTATTTTTTTGAATGCGATGAAAATGGAGACCAGTATTATTCGGACGAGTTTTAGCGGG

Coding sequence (CDS)

ATGGGTTCAGTCGCTTCGCTCAAGTTCTTGATTTACGGTCGGACCGGCTGGATCGGAGGTTTGCTCGGCCAGCTCTGTGAACAACAGGGGATCGATTTCGCTTACGGGTCGGGCCGGCTCGAGAACCGGGTCGCCGTCGAGGCCGACATTGCCGCCGTGAAGCCCACCCACGTGTTCAACGCCGCCGGCGTCACCGGCCGCCCCAACGTGGACTGGTGCGAATCGCATAAGGTCGAGACCATCAGAACCAATGTGGTCGGGACCTTGAGCTTGGCCGATGTGTGCCGTGAGCGAGGTTTGATCTTGATTAATTACGCCACTGGGTGCATTTTCGAGTACGATTCTTCGCATCCGCTCAATTCCGGGGTTGGATTTAAGGAGGATGAAACCCCTAATTTTATTGGGTCCTTTTATTCCAAGACGAAAGCCATGGTGGAGGATCTGCTGAAAAACTATGAGAATGTGTGCACCTTGCGCGTTAGGATGCCGATATCCTCTGATTTATCGAATCCTCGCAACTTCATTACGAAGATAACTAGATATGAGAAGGTTGTCGACATACCAAACTCGATGTCGATCTTGGACGAACTCCTCCCGATCTCGATTGAAATGGCAAAAAGAAACCTCACTGGAATATATAACTTCACCAATCCAGGAGTGGTGAGCCACAATGAGATCTTGGAGATGTACAAGCAATTCATTGACCCCAGTTTCACCTGGAAGAACTTCACTTTGGAGGAGCAAGCCAAAGTGATCGTGGCCCCTCGGAGCAACAACGAGCTCGATGCGAGCAAGTTGAAGAAGGAATTCCCTGAACTCATGTCCATCAAAGAATCTCTGGTCAAGTATGTCTTCAAGCCAAATCAGAAAACTTCTGCAGCTTAA

Protein sequence

MGSVASLKFLIYGRTGWIGGLLGQLCEQQGIDFAYGSGRLENRVAVEADIAAVKPTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDSSHPLNSGVGFKEDETPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITRYEKVVDIPNSMSILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYKQFIDPSFTWKNFTLEEQAKVIVAPRSNNELDASKLKKEFPELMSIKESLVKYVFKPNQKTSAA

Homology

[Close]

BLAST of Sed0027817 vs. NCBI nr
Match: XP_038875992.1 (bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase [Benincasa hispida])

HSP 1 Score: 562.4 bits (1448), Expect = 2.3e-156
Identity = 272/293 (92.83%), Postives = 287/293 (97.95%), Query Frame = 0


Query: 2   GSVASLKFLIYGRTGWIGGLLGQLCEQQGIDFAYGSGRLENRVAVEADIAAVKPTHVFNA 61
           GS  SLKFLIYGRTGWIGGLLG LC+QQGIDF YGSGRLENR ++EADIAAVKPTHVFNA
Sbjct: 8   GSGPSLKFLIYGRTGWIGGLLGHLCQQQGIDFTYGSGRLENRASLEADIAAVKPTHVFNA 67

Query: 62  AGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDSSHPLNS 121
           AGVTGRPNVDWCESHKVETIRTNVVGTL+LADVCRERGLILINYATGCIFEYDS+HPLNS
Sbjct: 68  AGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRERGLILINYATGCIFEYDSAHPLNS 127

Query: 122 GVGFKEDETPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITRY 181
           G+GFKED+TPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITRY
Sbjct: 128 GIGFKEDDTPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITRY 187

Query: 182 EKVVDIPNSMSILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYKQFIDPSFTWK 241
           EKVVDIPNSM+ILDELLPISIEMAKRNLTGI+NFTNPGVVSHNEILEMYKQFIDP+FTWK
Sbjct: 188 EKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFIDPNFTWK 247

Query: 242 NFTLEEQAKVIVAPRSNNELDASKLKKEFPELMSIKESLVKYVFKPNQKTSAA 295
           NFTL+EQAKVIVAPRSNNELDA+KLK EFPEL+SIK+SL+KYVFKPNQKTSAA
Sbjct: 248 NFTLDEQAKVIVAPRSNNELDATKLKNEFPELLSIKDSLIKYVFKPNQKTSAA 300

[Close]

BLAST of Sed0027817 vs. NCBI nr
Match: XP_022159780.1 (bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase [Momordica charantia])

HSP 1 Score: 561.6 bits (1446), Expect = 4.0e-156
Identity = 271/290 (93.45%), Postives = 286/290 (98.62%), Query Frame = 0


Query: 5   ASLKFLIYGRTGWIGGLLGQLCEQQGIDFAYGSGRLENRVAVEADIAAVKPTHVFNAAGV 64
           AS +FLIYGRTGWIGGLLG+LCEQQGIDF+YGSGRLENR ++EADIAAVKPTHVFNAAGV
Sbjct: 13  ASFRFLIYGRTGWIGGLLGKLCEQQGIDFSYGSGRLENRASLEADIAAVKPTHVFNAAGV 72

Query: 65  TGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDSSHPLNSGVG 124
           TGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGL+LINYATGCIFEYDS+HPLNSG+G
Sbjct: 73  TGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLVLINYATGCIFEYDSAHPLNSGIG 132

Query: 125 FKEDETPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITRYEKV 184
           FKE+ETPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKIT+YEKV
Sbjct: 133 FKEEETPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITKYEKV 192

Query: 185 VDIPNSMSILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYKQFIDPSFTWKNFT 244
           VDIPNSM+ILDELLPISIEMAKRNLTGI+NFTNPGVVSHNEILEMYKQFIDP+FTWKNF 
Sbjct: 193 VDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFIDPNFTWKNFN 252

Query: 245 LEEQAKVIVAPRSNNELDASKLKKEFPELMSIKESLVKYVFKPNQKTSAA 295
           LEEQAKVIVAPRSNNELDASKLK EFPELMSIK+SL+KYVFKPNQKTSAA
Sbjct: 253 LEEQAKVIVAPRSNNELDASKLKNEFPELMSIKDSLIKYVFKPNQKTSAA 302

[Close]

BLAST of Sed0027817 vs. NCBI nr
Match: XP_022969861.1 (bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase-like [Cucurbita maxima])

HSP 1 Score: 561.2 bits (1445), Expect = 5.2e-156
Identity = 274/292 (93.84%), Postives = 286/292 (97.95%), Query Frame = 0


Query: 3   SVASLKFLIYGRTGWIGGLLGQLCEQQGIDFAYGSGRLENRVAVEADIAAVKPTHVFNAA 62
           S  SLKFLIYGRTGWIGGLLG++CEQQGI FAYGSGRLENRV++EADIAAVKPTHVFNAA
Sbjct: 9   SAPSLKFLIYGRTGWIGGLLGKICEQQGIHFAYGSGRLENRVSLEADIAAVKPTHVFNAA 68

Query: 63  GVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDSSHPLNSG 122
           GVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDS+HPLNSG
Sbjct: 69  GVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDSAHPLNSG 128

Query: 123 VGFKEDETPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITRYE 182
           +GFKEDE PNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITRYE
Sbjct: 129 IGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITRYE 188

Query: 183 KVVDIPNSMSILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYKQFIDPSFTWKN 242
           KVVDIPNSM+ILDELLPISIEMAKRNLTGI+NFTNPGVVSHNEILEMYKQFIDP+FTWKN
Sbjct: 189 KVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFIDPNFTWKN 248

Query: 243 FTLEEQAKVIVAPRSNNELDASKLKKEFPELMSIKESLVKYVFKPNQKTSAA 295
           FTLEEQAKVIVAPRSNNELDA+KLK EFPEL+SIKESL+K VFKPNQKTSAA
Sbjct: 249 FTLEEQAKVIVAPRSNNELDATKLKNEFPELLSIKESLIKNVFKPNQKTSAA 300

[Close]

BLAST of Sed0027817 vs. NCBI nr
Match: XP_023549712.1 (bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 561.2 bits (1445), Expect = 5.2e-156
Identity = 274/293 (93.52%), Postives = 286/293 (97.61%), Query Frame = 0


Query: 2   GSVASLKFLIYGRTGWIGGLLGQLCEQQGIDFAYGSGRLENRVAVEADIAAVKPTHVFNA 61
           GS  SLKFLIYGRTGWIGGLLG++CEQQGI FAYGSGRLENRV++EADI AVKPTHVFNA
Sbjct: 8   GSAPSLKFLIYGRTGWIGGLLGKICEQQGIHFAYGSGRLENRVSLEADIDAVKPTHVFNA 67

Query: 62  AGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDSSHPLNS 121
           AGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDS+HPLNS
Sbjct: 68  AGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDSAHPLNS 127

Query: 122 GVGFKEDETPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITRY 181
           G+GFKEDE PNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITRY
Sbjct: 128 GIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITRY 187

Query: 182 EKVVDIPNSMSILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYKQFIDPSFTWK 241
           EKVVDIPNSM+ILDELLPISIEMAKRNLTGI+NFTNPGVVSHNEILEMYKQFIDP+FTWK
Sbjct: 188 EKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFIDPNFTWK 247

Query: 242 NFTLEEQAKVIVAPRSNNELDASKLKKEFPELMSIKESLVKYVFKPNQKTSAA 295
           NFTLEEQAKVIVAPRSNNELDA+KLK EFPEL+SIKESL+K VFKPNQKTSAA
Sbjct: 248 NFTLEEQAKVIVAPRSNNELDATKLKNEFPELLSIKESLIKNVFKPNQKTSAA 300

[Close]

BLAST of Sed0027817 vs. NCBI nr
Match: KAG6579471.1 (Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016940.1 Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 560.1 bits (1442), Expect = 1.2e-155
Identity = 273/293 (93.17%), Postives = 286/293 (97.61%), Query Frame = 0


Query: 2   GSVASLKFLIYGRTGWIGGLLGQLCEQQGIDFAYGSGRLENRVAVEADIAAVKPTHVFNA 61
           GS  SLKFLIYGRTGWIGGLLG++CEQQGI FAYGSGRLENRV++EADI AVKPTHVFNA
Sbjct: 8   GSAPSLKFLIYGRTGWIGGLLGKICEQQGIHFAYGSGRLENRVSLEADIDAVKPTHVFNA 67

Query: 62  AGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDSSHPLNS 121
           AGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDS+HPLNS
Sbjct: 68  AGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDSAHPLNS 127

Query: 122 GVGFKEDETPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITRY 181
           G+GFKEDE PNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITRY
Sbjct: 128 GIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITRY 187

Query: 182 EKVVDIPNSMSILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYKQFIDPSFTWK 241
           EKVVDIPNSM+ILDELLPISIEMAKRNLTGI+NFTNPGVVSHNEILEMYKQFIDP+FTWK
Sbjct: 188 EKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFIDPNFTWK 247

Query: 242 NFTLEEQAKVIVAPRSNNELDASKLKKEFPELMSIKESLVKYVFKPNQKTSAA 295
           NFTLEEQAKVIVAPRSNNELDA+KLK EFPEL+SIK+SL+K VFKPNQKTSAA
Sbjct: 248 NFTLEEQAKVIVAPRSNNELDATKLKNEFPELLSIKDSLIKNVFKPNQKTSAA 300

[Close]

BLAST of Sed0027817 vs. ExPASy Swiss-Prot
Match: Q9LQ04 (Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase OS=Arabidopsis thaliana OX=3702 GN=NRS/ER PE=1 SV=1)

HSP 1 Score: 520.4 bits (1339), Expect = 1.3e-146
Identity = 246/289 (85.12%), Postives = 273/289 (94.46%), Query Frame = 0


Query: 3   SVASLKFLIYGRTGWIGGLLGQLCEQQGIDFAYGSGRLENRVAVEADIAAVKPTHVFNAA 62
           S +S  FLIYG+TGWIGGLLG+LCE QGI + YGSGRL++R ++ ADI +VKP+HVFNAA
Sbjct: 9   SSSSFNFLIYGKTGWIGGLLGKLCEAQGITYTYGSGRLQDRQSIVADIESVKPSHVFNAA 68

Query: 63  GVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDSSHPLNSG 122
           GVTGRPNVDWCESHKVETIRTNV GTL+LAD+CRE+GL+LINYATGCIFEYDS HPL SG
Sbjct: 69  GVTGRPNVDWCESHKVETIRTNVAGTLTLADICREKGLVLINYATGCIFEYDSGHPLGSG 128

Query: 123 VGFKEDETPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITRYE 182
           +GFKE++TPNF GSFYSKTKAMVE+LLKNYENVCTLRVRMPISSDL+NPRNFITKI RYE
Sbjct: 129 IGFKEEDTPNFTGSFYSKTKAMVEELLKNYENVCTLRVRMPISSDLTNPRNFITKIARYE 188

Query: 183 KVVDIPNSMSILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYKQFIDPSFTWKN 242
           KVVDIPNSM+ILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMY+ +IDPSFTWKN
Sbjct: 189 KVVDIPNSMTILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYRDYIDPSFTWKN 248

Query: 243 FTLEEQAKVIVAPRSNNELDASKLKKEFPELMSIKESLVKYVFKPNQKT 292
           FTLEEQAKVIVAPRSNNELDA+KLK EFPELMSIKESL+K+VF+PN+KT
Sbjct: 249 FTLEEQAKVIVAPRSNNELDATKLKTEFPELMSIKESLIKFVFEPNKKT 297

[Close]

BLAST of Sed0027817 vs. ExPASy Swiss-Prot
Match: Q9SYM5 (Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 OS=Arabidopsis thaliana OX=3702 GN=RHM1 PE=1 SV=1)

HSP 1 Score: 485.0 bits (1247), Expect = 6.2e-136
Identity = 226/286 (79.02%), Postives = 261/286 (91.26%), Query Frame = 0


Query: 6   SLKFLIYGRTGWIGGLLGQLCEQQGIDFAYGSGRLENRVAVEADIAAVKPTHVFNAAGVT 65
           SLKFLIYG+TGWIGGLLG++C++QGI + YG GRLE+R ++  DI +VKPTHVFN+AGVT
Sbjct: 384 SLKFLIYGKTGWIGGLLGKICDKQGIAYEYGKGRLEDRSSLLQDIQSVKPTHVFNSAGVT 443

Query: 66  GRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDSSHPLNSGVGF 125
           GRPNVDWCESHK ETIR NV GTL+LADVCRE GL+++N+ATGCIFEYD  HP  SG+GF
Sbjct: 444 GRPNVDWCESHKTETIRANVAGTLTLADVCREHGLLMMNFATGCIFEYDDKHPEGSGIGF 503

Query: 126 KEDETPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITRYEKVV 185
           KE++TPNF GSFYSKTKAMVE+LLK Y+NVCTLRVRMPISSDL+NPRNFITKI+RY KVV
Sbjct: 504 KEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVV 563

Query: 186 DIPNSMSILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYKQFIDPSFTWKNFTL 245
           +IPNSM++LDELLPISIEMAKRNL GI+NFTNPGVVSHNEILEMY+ +I+P F W NFTL
Sbjct: 564 NIPNSMTVLDELLPISIEMAKRNLKGIWNFTNPGVVSHNEILEMYRDYINPEFKWANFTL 623

Query: 246 EEQAKVIVAPRSNNELDASKLKKEFPELMSIKESLVKYVFKPNQKT 292
           EEQAKVIVAPRSNNE+DASKLKKEFPEL+SIKESL+KY + PN+KT
Sbjct: 624 EEQAKVIVAPRSNNEMDASKLKKEFPELLSIKESLIKYAYGPNKKT 669

[Close]

BLAST of Sed0027817 vs. ExPASy Swiss-Prot
Match: Q9LPG6 (Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM2 OS=Arabidopsis thaliana OX=3702 GN=RHM2 PE=1 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 4.0e-135
Identity = 223/290 (76.90%), Postives = 263/290 (90.69%), Query Frame = 0


Query: 2   GSVASLKFLIYGRTGWIGGLLGQLCEQQGIDFAYGSGRLENRVAVEADIAAVKPTHVFNA 61
           G  ASLKFLIYG+TGW+GGLLG+LCE+QGI + YG GRLE+R ++ ADI ++KPTHVFNA
Sbjct: 378 GDKASLKFLIYGKTGWLGGLLGKLCEKQGITYEYGKGRLEDRASLVADIRSIKPTHVFNA 437

Query: 62  AGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDSSHPLNS 121
           AG+TGRPNVDWCESHK ETIR NV GTL+LADVCRE  L+++N+ATGCIFEYD++HP  S
Sbjct: 438 AGLTGRPNVDWCESHKPETIRVNVAGTLTLADVCRENDLLMMNFATGCIFEYDATHPEGS 497

Query: 122 GVGFKEDETPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITRY 181
           G+GFKE++ PNF GSFYSKTKAMVE+LL+ ++NVCTLRVRMPISSDL+NPRNFITKI+RY
Sbjct: 498 GIGFKEEDKPNFFGSFYSKTKAMVEELLREFDNVCTLRVRMPISSDLNNPRNFITKISRY 557

Query: 182 EKVVDIPNSMSILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYKQFIDPSFTWK 241
            KVVDIPNSM++LDELLPISIEMAKRNL GI+NFTNPGVVSHNEILEMYK +I+P F W 
Sbjct: 558 NKVVDIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKNYIEPGFKWS 617

Query: 242 NFTLEEQAKVIVAPRSNNELDASKLKKEFPELMSIKESLVKYVFKPNQKT 292
           NFT+EEQAKVIVA RSNNE+D SKL KEFPE++SIKESL+KYVF+PN++T
Sbjct: 618 NFTVEEQAKVIVAARSNNEMDGSKLSKEFPEMLSIKESLLKYVFEPNKRT 667

[Close]

BLAST of Sed0027817 vs. ExPASy Swiss-Prot
Match: Q9LH76 (Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM3 OS=Arabidopsis thaliana OX=3702 GN=RHM3 PE=2 SV=1)

HSP 1 Score: 478.0 bits (1229), Expect = 7.6e-134
Identity = 220/290 (75.86%), Postives = 262/290 (90.34%), Query Frame = 0


Query: 2   GSVASLKFLIYGRTGWIGGLLGQLCEQQGIDFAYGSGRLENRVAVEADIAAVKPTHVFNA 61
           G   SLKFLIYG+TGW+GGLLG+LCE+QGI + YG GRLE+R ++ ADI ++KP+HVFNA
Sbjct: 375 GDKRSLKFLIYGKTGWLGGLLGKLCEKQGIPYEYGKGRLEDRASLIADIRSIKPSHVFNA 434

Query: 62  AGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDSSHPLNS 121
           AG+TGRPNVDWCESHK ETIR NV GTL+LADVCRE  L+++N+ATGCIFEYD++HP  S
Sbjct: 435 AGLTGRPNVDWCESHKTETIRVNVAGTLTLADVCRENDLLMMNFATGCIFEYDAAHPEGS 494

Query: 122 GVGFKEDETPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITRY 181
           G+GFKE++ PNF GSFYSKTKAMVE+LL+ ++NVCTLRVRMPISSDL+NPRNFITKI+RY
Sbjct: 495 GIGFKEEDKPNFTGSFYSKTKAMVEELLREFDNVCTLRVRMPISSDLNNPRNFITKISRY 554

Query: 182 EKVVDIPNSMSILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYKQFIDPSFTWK 241
            KVV+IPNSM+ILDELLPISIEMAKRNL GI+NFTNPGVVSHNEILEMYK +I+P F W 
Sbjct: 555 NKVVNIPNSMTILDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKSYIEPDFKWS 614

Query: 242 NFTLEEQAKVIVAPRSNNELDASKLKKEFPELMSIKESLVKYVFKPNQKT 292
           NF LEEQAKVIVAPRSNNE+D +KL KEFPE++SIK+SL+KYVF+PN++T
Sbjct: 615 NFNLEEQAKVIVAPRSNNEMDGAKLSKEFPEMLSIKDSLIKYVFEPNKRT 664

[Close]

BLAST of Sed0027817 vs. ExPASy Swiss-Prot
Match: Q5UPS5 (Uncharacterized protein L780 OS=Acanthamoeba polyphaga mimivirus OX=212035 GN=MIMI_L780 PE=1 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 6.3e-56
Identity = 114/286 (39.86%), Postives = 175/286 (61.19%), Query Frame = 0


Query: 7   LKFLIYGRTGWIGGLLGQLCEQQGIDFAYGSGRLENRVAVEADIAAVKPTHVFNAAGVT- 66
           +K+LI+G  GWIG ++ ++ EQQG        R ++  AVE +I+ +KP  V +  G T 
Sbjct: 1   MKWLIFGNKGWIGSMVSKILEQQGEQVVGAQSRADDESAVEREISEIKPDRVMSFIGRTH 60

Query: 67  --GRPNVDWCE--SHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDSSHPLNS 126
             G   +D+ E     VE ++ N+ G L LA +C++  + L    TGCIFE  ++   + 
Sbjct: 61  GPGYSTIDYLEQSGKLVENVKDNLYGPLCLAFICQKYNIHLTYLGTGCIFEGQNNFSADE 120

Query: 127 GVGFKEDETPNFIGSFYSKTKAMVEDLLKNYEN-VCTLRVRMPISSDLSNPRNFITKITR 186
             GF E++ PNF GS YS  K   + L+  ++N V  LR+RMPI+ +  NPR+FITKI  
Sbjct: 121 -KGFTENDKPNFFGSSYSVVKGFTDRLMHFFDNDVLNLRIRMPITIE-QNPRSFITKILS 180

Query: 187 YEKVVDIPNSMSILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYKQFIDPSFTW 246
           Y ++  IPNSM+ILD+++P+ I+MA+   TG +NFTNPG+VSHNEIL + +    P+ TW
Sbjct: 181 YSRICSIPNSMTILDQMIPVMIDMARNKTTGTFNFTNPGLVSHNEILSLIRDIHKPNLTW 240

Query: 247 KNFTLEEQAKVIVAPRSNNELDASKLKKEFPELMSIKESLVKYVFK 287
           +N + E+Q  ++ A RSNN L+  KL+  +P++  I   + + V K
Sbjct: 241 ENMSREQQLAILKADRSNNLLNTDKLQSLYPDVPDILTGIREVVSK 284

[Close]

BLAST of Sed0027817 vs. ExPASy TrEMBL
Match: A0A6J1DZR3 (bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase OS=Momordica charantia OX=3673 GN=LOC111026099 PE=4 SV=1)

HSP 1 Score: 561.6 bits (1446), Expect = 1.9e-156
Identity = 271/290 (93.45%), Postives = 286/290 (98.62%), Query Frame = 0


Query: 5   ASLKFLIYGRTGWIGGLLGQLCEQQGIDFAYGSGRLENRVAVEADIAAVKPTHVFNAAGV 64
           AS +FLIYGRTGWIGGLLG+LCEQQGIDF+YGSGRLENR ++EADIAAVKPTHVFNAAGV
Sbjct: 13  ASFRFLIYGRTGWIGGLLGKLCEQQGIDFSYGSGRLENRASLEADIAAVKPTHVFNAAGV 72

Query: 65  TGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDSSHPLNSGVG 124
           TGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGL+LINYATGCIFEYDS+HPLNSG+G
Sbjct: 73  TGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLVLINYATGCIFEYDSAHPLNSGIG 132

Query: 125 FKEDETPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITRYEKV 184
           FKE+ETPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKIT+YEKV
Sbjct: 133 FKEEETPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITKYEKV 192

Query: 185 VDIPNSMSILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYKQFIDPSFTWKNFT 244
           VDIPNSM+ILDELLPISIEMAKRNLTGI+NFTNPGVVSHNEILEMYKQFIDP+FTWKNF 
Sbjct: 193 VDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFIDPNFTWKNFN 252

Query: 245 LEEQAKVIVAPRSNNELDASKLKKEFPELMSIKESLVKYVFKPNQKTSAA 295
           LEEQAKVIVAPRSNNELDASKLK EFPELMSIK+SL+KYVFKPNQKTSAA
Sbjct: 253 LEEQAKVIVAPRSNNELDASKLKNEFPELMSIKDSLIKYVFKPNQKTSAA 302

[Close]

BLAST of Sed0027817 vs. ExPASy TrEMBL
Match: A0A6J1HYZ2 (bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase-like OS=Cucurbita maxima OX=3661 GN=LOC111468931 PE=4 SV=1)

HSP 1 Score: 561.2 bits (1445), Expect = 2.5e-156
Identity = 274/292 (93.84%), Postives = 286/292 (97.95%), Query Frame = 0


Query: 3   SVASLKFLIYGRTGWIGGLLGQLCEQQGIDFAYGSGRLENRVAVEADIAAVKPTHVFNAA 62
           S  SLKFLIYGRTGWIGGLLG++CEQQGI FAYGSGRLENRV++EADIAAVKPTHVFNAA
Sbjct: 9   SAPSLKFLIYGRTGWIGGLLGKICEQQGIHFAYGSGRLENRVSLEADIAAVKPTHVFNAA 68

Query: 63  GVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDSSHPLNSG 122
           GVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDS+HPLNSG
Sbjct: 69  GVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDSAHPLNSG 128

Query: 123 VGFKEDETPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITRYE 182
           +GFKEDE PNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITRYE
Sbjct: 129 IGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITRYE 188

Query: 183 KVVDIPNSMSILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYKQFIDPSFTWKN 242
           KVVDIPNSM+ILDELLPISIEMAKRNLTGI+NFTNPGVVSHNEILEMYKQFIDP+FTWKN
Sbjct: 189 KVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFIDPNFTWKN 248

Query: 243 FTLEEQAKVIVAPRSNNELDASKLKKEFPELMSIKESLVKYVFKPNQKTSAA 295
           FTLEEQAKVIVAPRSNNELDA+KLK EFPEL+SIKESL+K VFKPNQKTSAA
Sbjct: 249 FTLEEQAKVIVAPRSNNELDATKLKNEFPELLSIKESLIKNVFKPNQKTSAA 300

[Close]

BLAST of Sed0027817 vs. ExPASy TrEMBL
Match: A0A6J1E3P2 (bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase-like OS=Cucurbita moschata OX=3662 GN=LOC111430302 PE=4 SV=1)

HSP 1 Score: 557.8 bits (1436), Expect = 2.8e-155
Identity = 272/293 (92.83%), Postives = 285/293 (97.27%), Query Frame = 0


Query: 2   GSVASLKFLIYGRTGWIGGLLGQLCEQQGIDFAYGSGRLENRVAVEADIAAVKPTHVFNA 61
           GS  SLKFLIYGRTGWIGGLLG++CEQQGI FAYGSGRLENRV++EADI AVKPTHVFNA
Sbjct: 8   GSAPSLKFLIYGRTGWIGGLLGKICEQQGIHFAYGSGRLENRVSLEADIDAVKPTHVFNA 67

Query: 62  AGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDSSHPLNS 121
           AGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYD +HPLNS
Sbjct: 68  AGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDLAHPLNS 127

Query: 122 GVGFKEDETPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITRY 181
           G+GFKEDE PNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITRY
Sbjct: 128 GIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITRY 187

Query: 182 EKVVDIPNSMSILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYKQFIDPSFTWK 241
           EKVVDIPNSM+ILDELLPISIEMAKRNLTGI+NFTNPGVVSHNEILEMYKQFIDP+FTWK
Sbjct: 188 EKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFIDPNFTWK 247

Query: 242 NFTLEEQAKVIVAPRSNNELDASKLKKEFPELMSIKESLVKYVFKPNQKTSAA 295
           NFTLEEQAKVIVAPRSNNELDA+KLK EFPEL+SIK+SL+K VFKPNQKTSAA
Sbjct: 248 NFTLEEQAKVIVAPRSNNELDATKLKNEFPELLSIKDSLIKNVFKPNQKTSAA 300

[Close]

BLAST of Sed0027817 vs. ExPASy TrEMBL
Match: A0A0A0KMP5 (RmlD_sub_bind domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G156140 PE=4 SV=1)

HSP 1 Score: 557.0 bits (1434), Expect = 4.7e-155
Identity = 268/293 (91.47%), Postives = 285/293 (97.27%), Query Frame = 0


Query: 2   GSVASLKFLIYGRTGWIGGLLGQLCEQQGIDFAYGSGRLENRVAVEADIAAVKPTHVFNA 61
           GSV++LKFLIYGRTGWIGGLLG LC++QGIDF YGSGRLENR ++EADIAAV PTHVFNA
Sbjct: 8   GSVSTLKFLIYGRTGWIGGLLGHLCQKQGIDFTYGSGRLENRASLEADIAAVNPTHVFNA 67

Query: 62  AGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDSSHPLNS 121
           AGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDS+HP+NS
Sbjct: 68  AGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDSAHPINS 127

Query: 122 GVGFKEDETPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITRY 181
           G+GFKEDE PNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITRY
Sbjct: 128 GIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITRY 187

Query: 182 EKVVDIPNSMSILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYKQFIDPSFTWK 241
           EKVVDIPNSM+ILDELLPISIEMAKRNLTGI+NFTNPGVVSHNEILEMYKQFIDP+FTWK
Sbjct: 188 EKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFIDPNFTWK 247

Query: 242 NFTLEEQAKVIVAPRSNNELDASKLKKEFPELMSIKESLVKYVFKPNQKTSAA 295
           NFTL+EQAKVIVAPRSNNELDA+KLK EFPEL+SIK+SL+KYVFKPNQKT  A
Sbjct: 248 NFTLDEQAKVIVAPRSNNELDATKLKNEFPELLSIKDSLIKYVFKPNQKTPTA 300

[Close]

BLAST of Sed0027817 vs. ExPASy TrEMBL
Match: A0A5A7TLE8 (Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003090 PE=4 SV=1)

HSP 1 Score: 556.2 bits (1432), Expect = 8.1e-155
Identity = 269/293 (91.81%), Postives = 284/293 (96.93%), Query Frame = 0


Query: 2   GSVASLKFLIYGRTGWIGGLLGQLCEQQGIDFAYGSGRLENRVAVEADIAAVKPTHVFNA 61
           GS +SLKFLIYGRTGWIGGLLG LC+QQGIDF YGSGRLENR ++EADIAAVKPTHVFNA
Sbjct: 8   GSGSSLKFLIYGRTGWIGGLLGHLCQQQGIDFTYGSGRLENRASLEADIAAVKPTHVFNA 67

Query: 62  AGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDSSHPLNS 121
           AGVTGRPNVDWCESHKVETIRTNVVGTL+LADVCRERGLILINYATGCIFEYDS+HP+NS
Sbjct: 68  AGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRERGLILINYATGCIFEYDSAHPINS 127

Query: 122 GVGFKEDETPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITRY 181
           G+GFKEDE PNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITRY
Sbjct: 128 GIGFKEDEIPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITRY 187

Query: 182 EKVVDIPNSMSILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYKQFIDPSFTWK 241
           EKVVDIPNSM+ILDELLPISIEMAKRNLTGI+NFTNPGVVSHNEILEMYKQFIDP+FTWK
Sbjct: 188 EKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILEMYKQFIDPNFTWK 247

Query: 242 NFTLEEQAKVIVAPRSNNELDASKLKKEFPELMSIKESLVKYVFKPNQKTSAA 295
           NF LEEQAKVIVAPRSNNELDA+KLK EFPEL+SIK+SL+KYVFKPNQKT  A
Sbjct: 248 NFNLEEQAKVIVAPRSNNELDATKLKNEFPELLSIKDSLLKYVFKPNQKTPTA 300

[Close]

BLAST of Sed0027817 vs. TAIR 10
Match: AT1G63000.1 (nucleotide-rhamnose synthase/epimerase-reductase )

HSP 1 Score: 520.4 bits (1339), Expect = 9.5e-148
Identity = 246/289 (85.12%), Postives = 273/289 (94.46%), Query Frame = 0


Query: 3   SVASLKFLIYGRTGWIGGLLGQLCEQQGIDFAYGSGRLENRVAVEADIAAVKPTHVFNAA 62
           S +S  FLIYG+TGWIGGLLG+LCE QGI + YGSGRL++R ++ ADI +VKP+HVFNAA
Sbjct: 9   SSSSFNFLIYGKTGWIGGLLGKLCEAQGITYTYGSGRLQDRQSIVADIESVKPSHVFNAA 68

Query: 63  GVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDSSHPLNSG 122
           GVTGRPNVDWCESHKVETIRTNV GTL+LAD+CRE+GL+LINYATGCIFEYDS HPL SG
Sbjct: 69  GVTGRPNVDWCESHKVETIRTNVAGTLTLADICREKGLVLINYATGCIFEYDSGHPLGSG 128

Query: 123 VGFKEDETPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITRYE 182
           +GFKE++TPNF GSFYSKTKAMVE+LLKNYENVCTLRVRMPISSDL+NPRNFITKI RYE
Sbjct: 129 IGFKEEDTPNFTGSFYSKTKAMVEELLKNYENVCTLRVRMPISSDLTNPRNFITKIARYE 188

Query: 183 KVVDIPNSMSILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYKQFIDPSFTWKN 242
           KVVDIPNSM+ILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMY+ +IDPSFTWKN
Sbjct: 189 KVVDIPNSMTILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYRDYIDPSFTWKN 248

Query: 243 FTLEEQAKVIVAPRSNNELDASKLKKEFPELMSIKESLVKYVFKPNQKT 292
           FTLEEQAKVIVAPRSNNELDA+KLK EFPELMSIKESL+K+VF+PN+KT
Sbjct: 249 FTLEEQAKVIVAPRSNNELDATKLKTEFPELMSIKESLIKFVFEPNKKT 297

[Close]

BLAST of Sed0027817 vs. TAIR 10
Match: AT1G78570.1 (rhamnose biosynthesis 1 )

HSP 1 Score: 485.0 bits (1247), Expect = 4.4e-137
Identity = 226/286 (79.02%), Postives = 261/286 (91.26%), Query Frame = 0


Query: 6   SLKFLIYGRTGWIGGLLGQLCEQQGIDFAYGSGRLENRVAVEADIAAVKPTHVFNAAGVT 65
           SLKFLIYG+TGWIGGLLG++C++QGI + YG GRLE+R ++  DI +VKPTHVFN+AGVT
Sbjct: 384 SLKFLIYGKTGWIGGLLGKICDKQGIAYEYGKGRLEDRSSLLQDIQSVKPTHVFNSAGVT 443

Query: 66  GRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDSSHPLNSGVGF 125
           GRPNVDWCESHK ETIR NV GTL+LADVCRE GL+++N+ATGCIFEYD  HP  SG+GF
Sbjct: 444 GRPNVDWCESHKTETIRANVAGTLTLADVCREHGLLMMNFATGCIFEYDDKHPEGSGIGF 503

Query: 126 KEDETPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITRYEKVV 185
           KE++TPNF GSFYSKTKAMVE+LLK Y+NVCTLRVRMPISSDL+NPRNFITKI+RY KVV
Sbjct: 504 KEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVV 563

Query: 186 DIPNSMSILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYKQFIDPSFTWKNFTL 245
           +IPNSM++LDELLPISIEMAKRNL GI+NFTNPGVVSHNEILEMY+ +I+P F W NFTL
Sbjct: 564 NIPNSMTVLDELLPISIEMAKRNLKGIWNFTNPGVVSHNEILEMYRDYINPEFKWANFTL 623

Query: 246 EEQAKVIVAPRSNNELDASKLKKEFPELMSIKESLVKYVFKPNQKT 292
           EEQAKVIVAPRSNNE+DASKLKKEFPEL+SIKESL+KY + PN+KT
Sbjct: 624 EEQAKVIVAPRSNNEMDASKLKKEFPELLSIKESLIKYAYGPNKKT 669

[Close]

BLAST of Sed0027817 vs. TAIR 10
Match: AT1G53500.1 (NAD-dependent epimerase/dehydratase family protein )

HSP 1 Score: 482.3 bits (1240), Expect = 2.9e-136
Identity = 223/290 (76.90%), Postives = 263/290 (90.69%), Query Frame = 0


Query: 2   GSVASLKFLIYGRTGWIGGLLGQLCEQQGIDFAYGSGRLENRVAVEADIAAVKPTHVFNA 61
           G  ASLKFLIYG+TGW+GGLLG+LCE+QGI + YG GRLE+R ++ ADI ++KPTHVFNA
Sbjct: 378 GDKASLKFLIYGKTGWLGGLLGKLCEKQGITYEYGKGRLEDRASLVADIRSIKPTHVFNA 437

Query: 62  AGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDSSHPLNS 121
           AG+TGRPNVDWCESHK ETIR NV GTL+LADVCRE  L+++N+ATGCIFEYD++HP  S
Sbjct: 438 AGLTGRPNVDWCESHKPETIRVNVAGTLTLADVCRENDLLMMNFATGCIFEYDATHPEGS 497

Query: 122 GVGFKEDETPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITRY 181
           G+GFKE++ PNF GSFYSKTKAMVE+LL+ ++NVCTLRVRMPISSDL+NPRNFITKI+RY
Sbjct: 498 GIGFKEEDKPNFFGSFYSKTKAMVEELLREFDNVCTLRVRMPISSDLNNPRNFITKISRY 557

Query: 182 EKVVDIPNSMSILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYKQFIDPSFTWK 241
            KVVDIPNSM++LDELLPISIEMAKRNL GI+NFTNPGVVSHNEILEMYK +I+P F W 
Sbjct: 558 NKVVDIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKNYIEPGFKWS 617

Query: 242 NFTLEEQAKVIVAPRSNNELDASKLKKEFPELMSIKESLVKYVFKPNQKT 292
           NFT+EEQAKVIVA RSNNE+D SKL KEFPE++SIKESL+KYVF+PN++T
Sbjct: 618 NFTVEEQAKVIVAARSNNEMDGSKLSKEFPEMLSIKESLLKYVFEPNKRT 667

[Close]

BLAST of Sed0027817 vs. TAIR 10
Match: AT3G14790.1 (rhamnose biosynthesis 3 )

HSP 1 Score: 478.0 bits (1229), Expect = 5.4e-135
Identity = 220/290 (75.86%), Postives = 262/290 (90.34%), Query Frame = 0


Query: 2   GSVASLKFLIYGRTGWIGGLLGQLCEQQGIDFAYGSGRLENRVAVEADIAAVKPTHVFNA 61
           G   SLKFLIYG+TGW+GGLLG+LCE+QGI + YG GRLE+R ++ ADI ++KP+HVFNA
Sbjct: 375 GDKRSLKFLIYGKTGWLGGLLGKLCEKQGIPYEYGKGRLEDRASLIADIRSIKPSHVFNA 434

Query: 62  AGVTGRPNVDWCESHKVETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDSSHPLNS 121
           AG+TGRPNVDWCESHK ETIR NV GTL+LADVCRE  L+++N+ATGCIFEYD++HP  S
Sbjct: 435 AGLTGRPNVDWCESHKTETIRVNVAGTLTLADVCRENDLLMMNFATGCIFEYDAAHPEGS 494

Query: 122 GVGFKEDETPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPRNFITKITRY 181
           G+GFKE++ PNF GSFYSKTKAMVE+LL+ ++NVCTLRVRMPISSDL+NPRNFITKI+RY
Sbjct: 495 GIGFKEEDKPNFTGSFYSKTKAMVEELLREFDNVCTLRVRMPISSDLNNPRNFITKISRY 554

Query: 182 EKVVDIPNSMSILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYKQFIDPSFTWK 241
            KVV+IPNSM+ILDELLPISIEMAKRNL GI+NFTNPGVVSHNEILEMYK +I+P F W 
Sbjct: 555 NKVVNIPNSMTILDELLPISIEMAKRNLRGIWNFTNPGVVSHNEILEMYKSYIEPDFKWS 614

Query: 242 NFTLEEQAKVIVAPRSNNELDASKLKKEFPELMSIKESLVKYVFKPNQKT 292
           NF LEEQAKVIVAPRSNNE+D +KL KEFPE++SIK+SL+KYVF+PN++T
Sbjct: 615 NFNLEEQAKVIVAPRSNNEMDGAKLSKEFPEMLSIKDSLIKYVFEPNKRT 664

[Close]

BLAST of Sed0027817 vs. TAIR 10
Match: AT5G59290.1 (UDP-glucuronic acid decarboxylase 3 )

HSP 1 Score: 54.3 bits (129), Expect = 1.9e-07
Identity = 46/179 (25.70%), Postives = 81/179 (45.25%), Query Frame = 0


Query: 78  VETIRTNVVGTLSLADVCRERGLILINYATGCIFEYDSSHPLNSGVGFKEDETPNFIGSF 137
           V+TI+TNV+GTL++  + +  G  ++  +T  ++     HP      +  +  P  + S 
Sbjct: 115 VKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLIHP--QPESYWGNVNPIGVRSC 174

Query: 138 YSKTKAMVEDLLKNYENVCTLRVRMPISSDLSNPR----------NFITKITRYEKV-VD 197
           Y + K + E L+ +Y     + +R+    +   PR          NFI +  R E + V 
Sbjct: 175 YDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEALTVQ 234

Query: 198 IP----NSMSILDELLPISIEMAKRNLTGIYNFTNPGVVSHNEILEMYKQFIDPSFTWK 242
            P     S   + +++   I + + N TG  N  NPG  +  E+ E  K+ I+PS   K
Sbjct: 235 KPGTQTRSFCYVSDMVDGLIRLMEGNDTGPINIGNPGEFTMVELAETVKELINPSIEIK 291

The following BLAST results are available for this feature:

BLAST of Sed0027817 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875992.1	2.3e-156	92.83	bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reducta...	[more]
XP_022159780.1	4.0e-156	93.45	bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reducta...	[more]
XP_022969861.1	5.2e-156	93.84	bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reducta...	[more]
XP_023549712.1	5.2e-156	93.52	bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reducta...	[more]
KAG6579471.1	1.2e-155	93.17	Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reducta...	[more]

BLAST of Sed0027817 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQ04	1.3e-146	85.12	Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reducta...	[more]
Q9SYM5	6.2e-136	79.02	Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epime...	[more]
Q9LPG6	4.0e-135	76.90	Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epime...	[more]
Q9LH76	7.6e-134	75.86	Trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epime...	[more]
Q5UPS5	6.3e-56	39.86	Uncharacterized protein L780 OS=Acanthamoeba polyphaga mimivirus OX=212035 GN=MI...	[more]

BLAST of Sed0027817 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DZR3	1.9e-156	93.45	bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reducta...	[more]
A0A6J1HYZ2	2.5e-156	93.84	bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reducta...	[more]
A0A6J1E3P2	2.8e-155	92.83	bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reducta...	[more]
A0A0A0KMP5	4.7e-155	91.47	RmlD_sub_bind domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G1561...	[more]
A0A5A7TLE8	8.1e-155	91.81	Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reducta...	[more]

BLAST of Sed0027817 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G63000.1	9.5e-148	85.12	nucleotide-rhamnose synthase/epimerase-reductase	[more]
AT1G78570.1	4.4e-137	79.02	rhamnose biosynthesis 1	[more]
AT1G53500.1	2.9e-136	76.90	NAD-dependent epimerase/dehydratase family protein	[more]
AT3G14790.1	5.4e-135	75.86	rhamnose biosynthesis 3	[more]
AT5G59290.1	1.9e-07	25.70	UDP-glucuronic acid decarboxylase 3	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.720		coord: 4..294 e-value: 1.0E-81 score: 276.4
None	No IPR available	PANTHER	PTHR43000	DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED	coord: 5..289
None	No IPR available	PANTHER	PTHR43000:SF26	BNAC05G13120D PROTEIN	coord: 5..289
None	No IPR available	CDD	cd05254	dTDP_HR_like_SDR_e	coord: 8..280 e-value: 5.64359E-62 score: 195.538
IPR029903	RmlD-like substrate binding domain	PFAM	PF04321	RmlD_sub_bind	coord: 8..181 e-value: 5.8E-14 score: 51.8
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 7..283

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0027817.1	Sed0027817.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019305	dTDP-rhamnose biosynthetic process
biological_process	GO:0010253	UDP-rhamnose biosynthetic process
molecular_function	GO:0008830	dTDP-4-dehydrorhamnose 3,5-epimerase activity
molecular_function	GO:0008831	dTDP-4-dehydrorhamnose reductase activity