Sed0027770 (gene) Chayote v1

Overview


Name	Sed0027770
Type	gene
Organism	Sechium edule (Chayote v1)
Description	WUSCHEL-related homeobox 3
Location	LG05: 40071573 .. 40072799 (+)
RNA-Seq Expression	Sed0027770
Synteny	Sed0027770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCCCCGCGAGATGGTGCCCGACCCCGGAACAAGTGATGATCTTGGAGGAGATCTATCGAAACGGGTTGAAGACTCCGAACGCTACCCAAATTCAGCATATTACTTGTCATCTTTCGTTGTATGGGAAGATCGAGGGCAAGAATGTGTTCTATTGGTTTCAGAATCACAAGGCTAGAGATCGCCAGAAGTTGAGGAGGAAGATTTACAAGCAGCTTCAGCTTCAGCACCATCAGTTTTTGCTTAAACATTGTCGTTTCGATCACCATCCGTGTTTTCTTCAGCACACCCACAACCAGAACCTAAATGATCAGTGTCCCCACCCACTTCTCCCGCTTTCAACTGGGTCTTATTTTCAGGTATACATTTTTCTTCTTTAAATATCATTTCCATACATAGTGATCTCAAAATTTTTAAATGTCAATTTTTTTTTCCTAATATATTTTAACGAGTTTTTATTTCGAAATAATGTTTTAATCGGTTGAGTTCAAGTTAAATACATTGAATTTAAATCTACAATGACCTAGGTTTATCAAGTACCCACAACATTTTTATTTACAAATTTCTTTTACATCACATTTTTATTATGATTTGAAAACTTAGAATTTTGCTCCTCTAAATTTGGAGGTACCATTTTTCCGTCCTAAGTTATGACAATGAGATACATCATAGGACTAGAAACGAGAAGGAAGCAGCCAAGAAAATTTCTTTTACATCTAACATAATGCTTCGTTTGAATTATGCTATTTAATATATATATATATATATATATATATATATATATATATAATTTATGTTAATGTACAATATAGACTAGTGAGAATATATATATATATATATAATTTATGTTATTGTTTGTTGTACAATATAGACTAGTGAAATTAGAACCTCCACTTAAAGATAATAATAATAAAAAAGAGTGTAAATGCCCTAATATTTAAACGTCATATAGCTTAATAGATTAAAGTTTTGAATTGAGTAGTAATATACAATGATTTTTGTTGATGCAGATGGAGGGTCAAGAGGGCTCGACGACGAAGGAAACAAGTTGCGAAAGAATGTGGTTTGGCGGGGTCGATGAGACACCGGTGGGGGCGGAGAACGGGAATGGGGACGCAGAGACGACCGGGAGTTTAAAGACGTTGGAGCTGTTTCCAGTGAAAGGGAGTTGTGTGAAGGAGGAGGAAAGGGAGAGTGGAAATGGTGGATGGGGGGGCCATTACTAA

mRNA sequence

ATGTCCCCCGCGAGATGGTGCCCGACCCCGGAACAAGTGATGATCTTGGAGGAGATCTATCGAAACGGGTTGAAGACTCCGAACGCTACCCAAATTCAGCATATTACTTGTCATCTTTCGTTGTATGGGAAGATCGAGGGCAAGAATGTGTTCTATTGGTTTCAGAATCACAAGGCTAGAGATCGCCAGAAGTTGAGGAGGAAGATTTACAAGCAGCTTCAGCTTCAGCACCATCAGTTTTTGCTTAAACATTGTCGTTTCGATCACCATCCGTGTTTTCTTCAGCACACCCACAACCAGAACCTAAATGATCAGTGTCCCCACCCACTTCTCCCGCTTTCAACTGGGTCTTATTTTCAGATGGAGGGTCAAGAGGGCTCGACGACGAAGGAAACAAGTTGCGAAAGAATGTGGTTTGGCGGGGTCGATGAGACACCGGTGGGGGCGGAGAACGGGAATGGGGACGCAGAGACGACCGGGAGTTTAAAGACGTTGGAGCTGTTTCCAGTGAAAGGGAGTTGTGTGAAGGAGGAGGAAAGGGAGAGTGGAAATGGTGGATGGGGGGGCCATTACTAA

Coding sequence (CDS)

ATGTCCCCCGCGAGATGGTGCCCGACCCCGGAACAAGTGATGATCTTGGAGGAGATCTATCGAAACGGGTTGAAGACTCCGAACGCTACCCAAATTCAGCATATTACTTGTCATCTTTCGTTGTATGGGAAGATCGAGGGCAAGAATGTGTTCTATTGGTTTCAGAATCACAAGGCTAGAGATCGCCAGAAGTTGAGGAGGAAGATTTACAAGCAGCTTCAGCTTCAGCACCATCAGTTTTTGCTTAAACATTGTCGTTTCGATCACCATCCGTGTTTTCTTCAGCACACCCACAACCAGAACCTAAATGATCAGTGTCCCCACCCACTTCTCCCGCTTTCAACTGGGTCTTATTTTCAGATGGAGGGTCAAGAGGGCTCGACGACGAAGGAAACAAGTTGCGAAAGAATGTGGTTTGGCGGGGTCGATGAGACACCGGTGGGGGCGGAGAACGGGAATGGGGACGCAGAGACGACCGGGAGTTTAAAGACGTTGGAGCTGTTTCCAGTGAAAGGGAGTTGTGTGAAGGAGGAGGAAAGGGAGAGTGGAAATGGTGGATGGGGGGGCCATTACTAA

Protein sequence

MSPARWCPTPEQVMILEEIYRNGLKTPNATQIQHITCHLSLYGKIEGKNVFYWFQNHKARDRQKLRRKIYKQLQLQHHQFLLKHCRFDHHPCFLQHTHNQNLNDQCPHPLLPLSTGSYFQMEGQEGSTTKETSCERMWFGGVDETPVGAENGNGDAETTGSLKTLELFPVKGSCVKEEERESGNGGWGGHY

Homology

[Close]

BLAST of Sed0027770 vs. NCBI nr
Match: XP_022944088.1 (putative WUSCHEL-related homeobox 2 [Cucurbita moschata])

HSP 1 Score: 221.9 bits (564), Expect = 4.9e-54
Identity = 131/193 (67.88%), Postives = 141/193 (73.06%), Query Frame = 0


Query: 2   SPARWCPTPEQVMILEEIYRNGLKTPNATQIQHITCHLSLYGKIEGKNVFYWFQNHKARD 61
           +P+RWCPTPEQVMILEEIYRNGLKTPNATQIQHIT HLSLYGKIEGKNVFYWFQNHKARD
Sbjct: 11  TPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARD 70

Query: 62  RQKLRRKIYKQLQLQHHQFLLKHCRFDHH---PCFLQHTHNQNLNDQCPHPLLPLSTGSY 121
           RQKLRRK+YKQLQ QHH F +K  RFD H    CFLQH H + L      PLLPL T  +
Sbjct: 71  RQKLRRKLYKQLQ-QHH-FFIKRQRFDDHHFFHCFLQH-HQRFL-----PPLLPLPT--H 130

Query: 122 FQMEGQEGSTTKETSCERMWFGGVDETPVGAENGNGDAETT---GSLKTLELFPVKGSCV 181
           FQ EG EG TT+         GG D   VG E    DAETT   G+L+TLELFPV+   V
Sbjct: 131 FQGEGGEGRTTEVEG------GGDDGMAVGEE----DAETTCGNGTLRTLELFPVRAGWV 183

Query: 182 KEEERESGNGGWG 189
           KEEE  SGNGGWG
Sbjct: 191 KEEEGGSGNGGWG 183

[Close]

BLAST of Sed0027770 vs. NCBI nr
Match: KAG6570743.1 (WUSCHEL-related homeobox 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 219.9 bits (559), Expect = 1.8e-53
Identity = 127/193 (65.80%), Postives = 141/193 (73.06%), Query Frame = 0


Query: 2   SPARWCPTPEQVMILEEIYRNGLKTPNATQIQHITCHLSLYGKIEGKNVFYWFQNHKARD 61
           +P+RWCPTPEQVMILEEIYRNGLKTPNATQIQHIT HLSLYGKIEGKNVFYWFQNHKARD
Sbjct: 10  TPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARD 69

Query: 62  RQKLRRKIYKQLQLQHHQFLLKHCRFDHH---PCFLQHTHNQNLNDQCPHPLLPLSTGSY 121
           RQKLRRK+YKQLQ QHH F +K  RFD H    CFLQ   + + + + P PLLPL T  +
Sbjct: 70  RQKLRRKLYKQLQ-QHH-FFIKRQRFDDHHFFHCFLQQQQHHHHHQRFPPPLLPLPT--H 129

Query: 122 FQMEGQEGSTTKETSCERMWFGGVDETPVGAENGNGDAETT---GSLKTLELFPVKGSCV 181
           FQ EG+   TT+         GG D   VG E    DAETT   G+L+TLELFPV+   V
Sbjct: 130 FQGEGR---TTEVEG------GGDDGMAVGEE----DAETTCRNGTLRTLELFPVRAGWV 185

Query: 182 KEEERESGNGGWG 189
           KEEE  SGNGGWG
Sbjct: 190 KEEEGGSGNGGWG 185

[Close]

BLAST of Sed0027770 vs. NCBI nr
Match: XP_038902731.1 (WUSCHEL-related homeobox 3-like [Benincasa hispida])

HSP 1 Score: 217.2 bits (552), Expect = 1.2e-52
Identity = 120/190 (63.16%), Postives = 138/190 (72.63%), Query Frame = 0


Query: 1   MSPARWCPTPEQVMILEEIYRNGLKTPNATQIQHITCHLSLYGKIEGKNVFYWFQNHKAR 60
           ++P+RWCPTPEQVMILEEIYRNGLKTPNATQIQHIT HLS YGKIEGKNVFYWFQNHKAR
Sbjct: 6   ITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQNHKAR 65

Query: 61  DRQKLRRKIYKQLQLQHHQFLLKHCRFDHHPCFLQHTHNQNLNDQCPHPLLPLSTGSYFQ 120
           DRQKLRRK+YKQLQ QHH FL+K  RFD H  F  +   Q++       LLP  + S+ Q
Sbjct: 66  DRQKLRRKLYKQLQ-QHH-FLMKRHRFDEHTQFFHYFLPQHVPQ-----LLPFPSPSH-Q 125

Query: 121 MEGQEGSTTKETSCERMWFGGVDETPVGAENGNGDAETT---GSLKTLELFPVKGSCVKE 180
            EG+E   T+       WFGG + T V  E+G    ETT   G+L+TLELFPV+ S +KE
Sbjct: 126 KEGEEEPATEVEGGRTTWFGGDEGTTVAEEDG----ETTCRNGTLRTLELFPVRASWMKE 183

Query: 181 EERESGNGGW 188
           EE  SGNGGW
Sbjct: 186 EEGTSGNGGW 183

[Close]

BLAST of Sed0027770 vs. NCBI nr
Match: XP_008463857.1 (PREDICTED: WUSCHEL-related homeobox 3 [Cucumis melo])

HSP 1 Score: 217.2 bits (552), Expect = 1.2e-52
Identity = 122/197 (61.93%), Postives = 136/197 (69.04%), Query Frame = 0


Query: 1   MSPARWCPTPEQVMILEEIYRNGLKTPNATQIQHITCHLSLYGKIEGKNVFYWFQNHKAR 60
           ++P+RWCPTPEQVMILEEIYRNGLKTPNATQIQHIT HLS YGKIEGKNVFYWFQNHKAR
Sbjct: 6   ITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQNHKAR 65

Query: 61  DRQKLRRKIYKQLQLQHHQFLLKHCRFDHHPCFLQHTHNQNLNDQCPH------PLLPLS 120
           DRQKLRRK+YKQLQ QHH F +K  RFD       H H+       PH      P LP  
Sbjct: 66  DRQKLRRKLYKQLQ-QHH-FFMKRQRFDD-----DHDHHHFFQYFLPHHVPQLLPQLPSP 125

Query: 121 TGSYFQMEGQEGSTTKETSCERMWFGGVDETPVGAENGNGDAETT---GSLKTLELFPVK 180
           +    ++  +E +T  E    R W GG D T V  E+G    ETT   GSL+TLELFPV+
Sbjct: 126 SSLQRELGEEEAATEVEGGGGRRWLGGDDGTTVAEEDG----ETTCGNGSLRTLELFPVR 185

Query: 181 GSCVKEEERESGNGGWG 189
           GS VKEEE  SGNGGWG
Sbjct: 186 GSWVKEEEGTSGNGGWG 191

[Close]

BLAST of Sed0027770 vs. NCBI nr
Match: XP_004148244.1 (WUSCHEL-related homeobox 3 [Cucumis sativus] >KGN47336.1 hypothetical protein Csa_022936 [Cucumis sativus])

HSP 1 Score: 216.1 bits (549), Expect = 2.7e-52
Identity = 121/197 (61.42%), Postives = 137/197 (69.54%), Query Frame = 0


Query: 1   MSPARWCPTPEQVMILEEIYRNGLKTPNATQIQHITCHLSLYGKIEGKNVFYWFQNHKAR 60
           ++P+RWCPTPEQVMILEEIYRNGLKTPNATQIQHIT HLS YGKIEGKNVFYWFQNHKAR
Sbjct: 6   ITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQNHKAR 65

Query: 61  DRQKLRRKIYKQLQLQHHQFLLKHCRFDHHPCFLQHTHNQNLNDQCPH------PLLPLS 120
           DRQKLRRK+YKQLQ QHH F +K  RFD H    QH H+       PH      P LP  
Sbjct: 66  DRQKLRRKLYKQLQ-QHH-FFMKRQRFDDH----QHDHHHFFQYFLPHHVPQLLPQLPSP 125

Query: 121 TGSYFQMEGQEGSTTKETSCERMWFGGVDETPVGAENGNGDAETT---GSLKTLELFPVK 180
           +    ++  +E +T  E    R W GG + T V  E+G    ETT   G+L+TLELFPV+
Sbjct: 126 SSLQREVGEEEAATEVEGGGGRRWMGGDEGTTVEEEDG----ETTCGNGTLRTLELFPVR 185

Query: 181 GSCVKEEERESGNGGWG 189
            S VKEEE  SGNGGWG
Sbjct: 186 ASWVKEEEGTSGNGGWG 192

[Close]

BLAST of Sed0027770 vs. ExPASy Swiss-Prot
Match: Q9SIB4 (WUSCHEL-related homeobox 3 OS=Arabidopsis thaliana OX=3702 GN=WOX3 PE=1 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.0e-30
Identity = 70/129 (54.26%), Postives = 84/129 (65.12%), Query Frame = 0


Query: 1   MSP---ARWCPTPEQVMILEEIYRNGLKTPNATQIQHITCHLSLYGKIEGKNVFYWFQNH 60
           MSP    RWCPTPEQ+MILEE+YR+G++TPNA QIQ IT HL+ YG+IEGKNVFYWFQNH
Sbjct: 1   MSPVASTRWCPTPEQLMILEEMYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNH 60

Query: 61  KARDRQKLRRKIYKQLQLQHHQFLLKHCR------------------FDHHPCFLQHTHN 109
           KARDRQKLR+K+ KQL  Q HQ  L+  +                   DHH  +  H HN
Sbjct: 61  KARDRQKLRKKLAKQLHQQQHQLQLQLQQIKPKPISSMISQPVNKNIIDHHNPYHHHHHN 120

[Close]

BLAST of Sed0027770 vs. ExPASy Swiss-Prot
Match: A2XZR3 (Putative WUSCHEL-related homeobox 2 OS=Oryza sativa subsp. indica OX=39946 GN=WOX2 PE=3 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.4e-27
Identity = 61/89 (68.54%), Postives = 69/89 (77.53%), Query Frame = 0


Query: 2   SPARWCPTPEQVMILEEIYRNGLKTPNATQIQHITCHLSLYGKIEGKNVFYWFQNHKARD 61
           S  RWCPTPEQ+M+LEE+YR GL+TPNA QIQ IT HLS YG+IEGKNVFYWFQNHKARD
Sbjct: 24  STTRWCPTPEQLMMLEEMYRGGLRTPNAAQIQQITAHLSTYGRIEGKNVFYWFQNHKARD 83

Query: 62  RQKLRRKIYKQLQLQHHQFLLKHCRFDHH 91
           RQKLRR+    L + HH  LL    + HH
Sbjct: 84  RQKLRRR----LCISHH--LLSCAHYYHH 106

[Close]

BLAST of Sed0027770 vs. ExPASy Swiss-Prot
Match: Q5W7C3 (Putative WUSCHEL-related homeobox 2 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX2 PE=3 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.4e-27
Identity = 61/89 (68.54%), Postives = 69/89 (77.53%), Query Frame = 0


Query: 2   SPARWCPTPEQVMILEEIYRNGLKTPNATQIQHITCHLSLYGKIEGKNVFYWFQNHKARD 61
           S  RWCPTPEQ+M+LEE+YR GL+TPNA QIQ IT HLS YG+IEGKNVFYWFQNHKARD
Sbjct: 24  STTRWCPTPEQLMMLEEMYRGGLRTPNAAQIQQITAHLSTYGRIEGKNVFYWFQNHKARD 83

Query: 62  RQKLRRKIYKQLQLQHHQFLLKHCRFDHH 91
           RQKLRR+    L + HH  LL    + HH
Sbjct: 84  RQKLRRR----LCISHH--LLSCAHYYHH 106

[Close]

BLAST of Sed0027770 vs. ExPASy Swiss-Prot
Match: Q70UV1 (WUSCHEL-related homeobox 3A OS=Zea mays OX=4577 GN=WOX3A PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 7.6e-26
Identity = 52/75 (69.33%), Postives = 66/75 (88.00%), Query Frame = 0


Query: 5  RWCPTPEQVMILEEIYRNGLKTPNATQIQHITCHLSLYGKIEGKNVFYWFQNHKARDRQK 64
          RWCPTPEQ+MILEE+YR+G++TPNA +IQ IT HL+ YG+IEGKNVFYWFQNHKAR+RQ+
Sbjct: 8  RWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHKARERQR 67

Query: 65 LRRKIYKQLQLQHHQ 80
          LRR++  + Q Q+ Q
Sbjct: 68 LRRRLCARHQQQYAQ 82

[Close]

BLAST of Sed0027770 vs. ExPASy Swiss-Prot
Match: Q6S3I3 (WUSCHEL-related homeobox 3B OS=Zea mays OX=4577 GN=WOX3B PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 7.6e-26
Identity = 52/75 (69.33%), Postives = 66/75 (88.00%), Query Frame = 0


Query: 5  RWCPTPEQVMILEEIYRNGLKTPNATQIQHITCHLSLYGKIEGKNVFYWFQNHKARDRQK 64
          RWCPTPEQ+MILEE+YR+G++TPNA +IQ IT HL+ YG+IEGKNVFYWFQNHKAR+RQ+
Sbjct: 8  RWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHKARERQR 67

Query: 65 LRRKIYKQLQLQHHQ 80
          LRR++  + Q Q+ Q
Sbjct: 68 LRRRLCARHQQQYAQ 82

[Close]

BLAST of Sed0027770 vs. ExPASy TrEMBL
Match: A0A6J1FXP0 (putative WUSCHEL-related homeobox 2 OS=Cucurbita moschata OX=3662 GN=LOC111448632 PE=3 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 2.3e-54
Identity = 131/193 (67.88%), Postives = 141/193 (73.06%), Query Frame = 0


Query: 2   SPARWCPTPEQVMILEEIYRNGLKTPNATQIQHITCHLSLYGKIEGKNVFYWFQNHKARD 61
           +P+RWCPTPEQVMILEEIYRNGLKTPNATQIQHIT HLSLYGKIEGKNVFYWFQNHKARD
Sbjct: 11  TPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARD 70

Query: 62  RQKLRRKIYKQLQLQHHQFLLKHCRFDHH---PCFLQHTHNQNLNDQCPHPLLPLSTGSY 121
           RQKLRRK+YKQLQ QHH F +K  RFD H    CFLQH H + L      PLLPL T  +
Sbjct: 71  RQKLRRKLYKQLQ-QHH-FFIKRQRFDDHHFFHCFLQH-HQRFL-----PPLLPLPT--H 130

Query: 122 FQMEGQEGSTTKETSCERMWFGGVDETPVGAENGNGDAETT---GSLKTLELFPVKGSCV 181
           FQ EG EG TT+         GG D   VG E    DAETT   G+L+TLELFPV+   V
Sbjct: 131 FQGEGGEGRTTEVEG------GGDDGMAVGEE----DAETTCGNGTLRTLELFPVRAGWV 183

Query: 182 KEEERESGNGGWG 189
           KEEE  SGNGGWG
Sbjct: 191 KEEEGGSGNGGWG 183

[Close]

BLAST of Sed0027770 vs. ExPASy TrEMBL
Match: A0A1S3CK69 (WUSCHEL-related homeobox 3 OS=Cucumis melo OX=3656 GN=LOC103501892 PE=3 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 5.8e-53
Identity = 122/197 (61.93%), Postives = 136/197 (69.04%), Query Frame = 0


Query: 1   MSPARWCPTPEQVMILEEIYRNGLKTPNATQIQHITCHLSLYGKIEGKNVFYWFQNHKAR 60
           ++P+RWCPTPEQVMILEEIYRNGLKTPNATQIQHIT HLS YGKIEGKNVFYWFQNHKAR
Sbjct: 6   ITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQNHKAR 65

Query: 61  DRQKLRRKIYKQLQLQHHQFLLKHCRFDHHPCFLQHTHNQNLNDQCPH------PLLPLS 120
           DRQKLRRK+YKQLQ QHH F +K  RFD       H H+       PH      P LP  
Sbjct: 66  DRQKLRRKLYKQLQ-QHH-FFMKRQRFDD-----DHDHHHFFQYFLPHHVPQLLPQLPSP 125

Query: 121 TGSYFQMEGQEGSTTKETSCERMWFGGVDETPVGAENGNGDAETT---GSLKTLELFPVK 180
           +    ++  +E +T  E    R W GG D T V  E+G    ETT   GSL+TLELFPV+
Sbjct: 126 SSLQRELGEEEAATEVEGGGGRRWLGGDDGTTVAEEDG----ETTCGNGSLRTLELFPVR 185

Query: 181 GSCVKEEERESGNGGWG 189
           GS VKEEE  SGNGGWG
Sbjct: 186 GSWVKEEEGTSGNGGWG 191

[Close]

BLAST of Sed0027770 vs. ExPASy TrEMBL
Match: A0A0A0KHT6 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G301060 PE=3 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 1.3e-52
Identity = 121/197 (61.42%), Postives = 137/197 (69.54%), Query Frame = 0


Query: 1   MSPARWCPTPEQVMILEEIYRNGLKTPNATQIQHITCHLSLYGKIEGKNVFYWFQNHKAR 60
           ++P+RWCPTPEQVMILEEIYRNGLKTPNATQIQHIT HLS YGKIEGKNVFYWFQNHKAR
Sbjct: 6   ITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQNHKAR 65

Query: 61  DRQKLRRKIYKQLQLQHHQFLLKHCRFDHHPCFLQHTHNQNLNDQCPH------PLLPLS 120
           DRQKLRRK+YKQLQ QHH F +K  RFD H    QH H+       PH      P LP  
Sbjct: 66  DRQKLRRKLYKQLQ-QHH-FFMKRQRFDDH----QHDHHHFFQYFLPHHVPQLLPQLPSP 125

Query: 121 TGSYFQMEGQEGSTTKETSCERMWFGGVDETPVGAENGNGDAETT---GSLKTLELFPVK 180
           +    ++  +E +T  E    R W GG + T V  E+G    ETT   G+L+TLELFPV+
Sbjct: 126 SSLQREVGEEEAATEVEGGGGRRWMGGDEGTTVEEEDG----ETTCGNGTLRTLELFPVR 185

Query: 181 GSCVKEEERESGNGGWG 189
            S VKEEE  SGNGGWG
Sbjct: 186 ASWVKEEEGTSGNGGWG 192

[Close]

BLAST of Sed0027770 vs. ExPASy TrEMBL
Match: A0A7J7DE76 (WUSCHEL-related homeobox 3 OS=Tripterygium wilfordii OX=458696 GN=HS088_TW07G00237 PE=3 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 9.3e-35
Identity = 99/205 (48.29%), Postives = 114/205 (55.61%), Query Frame = 0


Query: 1   MSPA---RWCPTPEQVMILEEIYRNGLKTPNATQIQHITCHLSLYGKIEGKNVFYWFQNH 60
           MSPA   RWCPTPEQ+MILEE+YR G++TPNA+QIQHIT  LS YGKIEGKNVFYWFQNH
Sbjct: 1   MSPAGSSRWCPTPEQLMILEELYRTGIRTPNASQIQHITAQLSFYGKIEGKNVFYWFQNH 60

Query: 61  KARDRQKLRRKIYKQLQLQ-----HHQFLLKHCRFDHHP--CFLQHTHNQNLNDQCPH-- 120
           KARDRQKLRRKI KQLQ Q     HHQ    H  +   P  C        N     PH  
Sbjct: 61  KARDRQKLRRKINKQLQQQQLYNHHHQLQQNHLHYFEPPAACAFHQLSQHNSPSFLPHEG 120

Query: 121 -----PLLPLSTGSYFQMEGQEGSTTKETSC-----ERMWFGGVDETPVGAENGNGDA-E 180
                     +T   +++   E   T E S      + M    V   P+     N     
Sbjct: 121 GLEDAAGASRATNYTWKLGIPETRETAEKSMMMYEHDWMMLMNVSPLPIQCSTTNTTTPT 180

Query: 181 TTGSLKTLELFPVKGSCVKEEERES 183
           TT  LKTLELFPV  +C+KEE  +S
Sbjct: 181 TTRPLKTLELFPVTATCLKEESDKS 205

[Close]

BLAST of Sed0027770 vs. ExPASy TrEMBL
Match: A0A6P5XKJ6 (WUSCHEL-related homeobox 3-like OS=Durio zibethinus OX=66656 GN=LOC111284239 PE=3 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 6.0e-34
Identity = 101/211 (47.87%), Postives = 121/211 (57.35%), Query Frame = 0


Query: 1   MSPA---RWCPTPEQVMILEEIYRNGLKTPNATQIQHITCHLSLYGKIEGKNVFYWFQNH 60
           MSPA   RWCPTPEQ+MILEE+YR+G++TPNA+QIQ IT HLS YGKIEGKNVFYWFQNH
Sbjct: 1   MSPAASTRWCPTPEQLMILEEMYRSGIRTPNASQIQQITSHLSFYGKIEGKNVFYWFQNH 60

Query: 61  KARDRQKLRRKIYKQLQLQ---HHQFLLKHCRFDHH------PCFLQHTHNQNLNDQCPH 120
           KARDRQKLRRK+ KQLQLQ   +HQ  L+    +HH      P      H    N  C  
Sbjct: 61  KARDRQKLRRKLTKQLQLQQQLYHQHQLQQNHPNHHSLHYDSPASPAFQHLSYYNSACLF 120

Query: 121 PLLPLSTGSYFQMEGQE--GSTTKETSCERM-------------WFGGVDETPVGAENGN 180
           P      G++     Q+    T K    ER+             W   VD  P+ ++  N
Sbjct: 121 P----QVGAHENAAAQQVMNYTWKFDIPERVDMDKATMRMIGSDWLMMVDLGPLSSQCNN 180

Query: 181 GDAETTGSLKTLELFPVKGSCVKEEERESGN 185
             + T   LKTLELFPV  S +KEE   S +
Sbjct: 181 --STTRPPLKTLELFPVTASNLKEECNNSSS 205

[Close]

BLAST of Sed0027770 vs. TAIR 10
Match: AT2G28610.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 134.8 bits (338), Expect = 7.3e-32
Identity = 70/129 (54.26%), Postives = 84/129 (65.12%), Query Frame = 0


Query: 1   MSP---ARWCPTPEQVMILEEIYRNGLKTPNATQIQHITCHLSLYGKIEGKNVFYWFQNH 60
           MSP    RWCPTPEQ+MILEE+YR+G++TPNA QIQ IT HL+ YG+IEGKNVFYWFQNH
Sbjct: 1   MSPVASTRWCPTPEQLMILEEMYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNH 60

Query: 61  KARDRQKLRRKIYKQLQLQHHQFLLKHCR------------------FDHHPCFLQHTHN 109
           KARDRQKLR+K+ KQL  Q HQ  L+  +                   DHH  +  H HN
Sbjct: 61  KARDRQKLRKKLAKQLHQQQHQLQLQLQQIKPKPISSMISQPVNKNIIDHHNPYHHHHHN 120

[Close]

BLAST of Sed0027770 vs. TAIR 10
Match: AT3G18010.1 (WUSCHEL related homeobox 1 )

HSP 1 Score: 101.3 bits (251), Expect = 8.9e-22
Identity = 48/82 (58.54%), Postives = 60/82 (73.17%), Query Frame = 0


Query: 1   MSPARWCPTPEQVMILEEIYRNGLKTPNATQIQHITCHLSLYGKIEGKNVFYWFQNHKAR 60
           M  +RW PTP+Q+ +LEE+YR G +TP+A  IQ IT  L  YGKIEGKNVFYWFQNHKAR
Sbjct: 72  MVSSRWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKAR 131

Query: 61  DRQKLRRKIYKQLQLQHHQFLL 83
           +RQK RR    Q++  H + +L
Sbjct: 132 ERQKRRR----QMETGHEETVL 149

[Close]

BLAST of Sed0027770 vs. TAIR 10
Match: AT1G46480.1 (WUSCHEL related homeobox 4 )

HSP 1 Score: 99.8 bits (247), Expect = 2.6e-21
Identity = 46/72 (63.89%), Postives = 54/72 (75.00%), Query Frame = 0


Query: 5   RWCPTPEQVMILEEIYRNGLKTPNATQIQHITCHLSLYGKIEGKNVFYWFQNHKARDRQK 64
           RW PT EQ+ ILE +Y+ G++TPNA QI+HIT  L  YGKIEGKNVFYWFQNHKAR+RQK
Sbjct: 90  RWNPTQEQIGILEMLYKGGMRTPNAQQIEHITLQLGKYGKIEGKNVFYWFQNHKARERQK 149

Query: 65  LRRKIYKQLQLQ 77
            +R     L  Q
Sbjct: 150 QKRNNLISLSCQ 161

[Close]

BLAST of Sed0027770 vs. TAIR 10
Match: AT2G01500.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 97.4 bits (241), Expect = 1.3e-20
Identity = 70/188 (37.23%), Postives = 92/188 (48.94%), Query Frame = 0


Query: 5   RWCPTPEQVMILEEIYRNGLKTPNATQIQHITCHLSLYGKIEGKNVFYWFQNHKARDRQK 64
           RW PTPEQ+  LEE+YR+G +TP   QIQ I   L  YG+IEGKNVFYWFQNHKAR+R K
Sbjct: 61  RWNPTPEQITTLEELYRSGTRTPTTEQIQQIASKLRKYGRIEGKNVFYWFQNHKARERLK 120

Query: 65  LRRKIYKQLQLQHHQFLLKHCRFDHH-------PCFLQHTHNQNLNDQCPHPLLPLSTGS 124
            RR+    + ++ H+ +       H        P F  HT+      Q  H L P S   
Sbjct: 121 RRRREGGAI-IKPHKDVKDSSSGGHRVDQTKLCPSF-PHTN----RPQPQHELDPASYNK 180

Query: 125 YFQMEGQEGSTTKETSCERMWFG-----------GVDETPVGA---ENGNGDAETTGSLK 172
                 ++  TT+E+       G            + + P      EN NG+ E T   +
Sbjct: 181 DNNANNEDHGTTEESDQRASEVGKYATWRNLVTWSITQQPEEINIDENVNGEEEETRDNR 240

[Close]

BLAST of Sed0027770 vs. TAIR 10
Match: AT3G11260.1 (WUSCHEL related homeobox 5 )

HSP 1 Score: 94.4 bits (233), Expect = 1.1e-19
Identity = 47/75 (62.67%), Postives = 54/75 (72.00%), Query Frame = 0


Query: 5  RWCPTPEQVMILEEIYRNGLKTPNATQIQHITCHLSLYGKIEGKNVFYWFQNHKARDRQK 64
          RW PT EQ+ IL +++R GL+TP   QIQ I+  LS YGKIE KNVFYWFQNHKAR+RQK
Sbjct: 24 RWNPTVEQLKILTDLFRAGLRTPTTDQIQKISTELSFYGKIESKNVFYWFQNHKARERQK 83

Query: 65 LRRKIYKQLQLQHHQ 80
           RRKI       HHQ
Sbjct: 84 -RRKISIDFDHHHHQ 97

The following BLAST results are available for this feature:

BLAST of Sed0027770 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022944088.1	4.9e-54	67.88	putative WUSCHEL-related homeobox 2 [Cucurbita moschata]	[more]
KAG6570743.1	1.8e-53	65.80	WUSCHEL-related homeobox 3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_038902731.1	1.2e-52	63.16	WUSCHEL-related homeobox 3-like [Benincasa hispida]	[more]
XP_008463857.1	1.2e-52	61.93	PREDICTED: WUSCHEL-related homeobox 3 [Cucumis melo]	[more]
XP_004148244.1	2.7e-52	61.42	WUSCHEL-related homeobox 3 [Cucumis sativus] >KGN47336.1 hypothetical protein Cs...	[more]

BLAST of Sed0027770 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SIB4	1.0e-30	54.26	WUSCHEL-related homeobox 3 OS=Arabidopsis thaliana OX=3702 GN=WOX3 PE=1 SV=1	[more]
A2XZR3	1.4e-27	68.54	Putative WUSCHEL-related homeobox 2 OS=Oryza sativa subsp. indica OX=39946 GN=WO...	[more]
Q5W7C3	1.4e-27	68.54	Putative WUSCHEL-related homeobox 2 OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
Q70UV1	7.6e-26	69.33	WUSCHEL-related homeobox 3A OS=Zea mays OX=4577 GN=WOX3A PE=2 SV=1	[more]
Q6S3I3	7.6e-26	69.33	WUSCHEL-related homeobox 3B OS=Zea mays OX=4577 GN=WOX3B PE=2 SV=1	[more]

BLAST of Sed0027770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FXP0	2.3e-54	67.88	putative WUSCHEL-related homeobox 2 OS=Cucurbita moschata OX=3662 GN=LOC11144863...	[more]
A0A1S3CK69	5.8e-53	61.93	WUSCHEL-related homeobox 3 OS=Cucumis melo OX=3656 GN=LOC103501892 PE=3 SV=1	[more]
A0A0A0KHT6	1.3e-52	61.42	Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G301060 PE...	[more]
A0A7J7DE76	9.3e-35	48.29	WUSCHEL-related homeobox 3 OS=Tripterygium wilfordii OX=458696 GN=HS088_TW07G002...	[more]
A0A6P5XKJ6	6.0e-34	47.87	WUSCHEL-related homeobox 3-like OS=Durio zibethinus OX=66656 GN=LOC111284239 PE=...	[more]

BLAST of Sed0027770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28610.1	7.3e-32	54.26	Homeodomain-like superfamily protein	[more]
AT3G18010.1	8.9e-22	58.54	WUSCHEL related homeobox 1	[more]
AT1G46480.1	2.6e-21	63.89	WUSCHEL related homeobox 4	[more]
AT2G01500.1	1.3e-20	37.23	Homeodomain-like superfamily protein	[more]
AT3G11260.1	1.1e-19	62.67	WUSCHEL related homeobox 5	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 1..68 e-value: 3.5E-5 score: 33.2
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 4..63 e-value: 7.1E-17 score: 61.0
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 1..64 score: 9.345112
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 5..64 e-value: 1.00195E-4 score: 36.8377
None	No IPR available	GENE3D	1.10.10.60		coord: 5..70 e-value: 5.4E-9 score: 37.4
None	No IPR available	PANTHER	PTHR45940:SF24	WUSCHEL-RELATED HOMEOBOX 3	coord: 2..106
IPR044555	Protein WUSCHEL-like	PANTHER	PTHR45940	WUSCHEL-RELATED HOMEOBOX 1-RELATED	coord: 2..106
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 5..64

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0027770.1	Sed0027770.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0099402	plant organ development
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity