Sed0027709 (gene) Chayote v1

Overview


Name	Sed0027709
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Pentatricopeptide repeat-containing protein
Location	LG05: 3930561 .. 3932087 (-)
RNA-Seq Expression	Sed0027709
Synteny	Sed0027709

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGATTCGGAAGAAACTAACCCAAATCCCACAAACGCCCAATTCTTCCAATTCCTTCATCTTCCTCGCCGCTCCTTTTTCCACTCATCAATCCACAGAACCCACAAACGAAATCCACAGAATCGCCAAAATCATCAACGACCATCCATTCCCCGATCAGCCCCTCCGCCCCATTCTCCGTCACCAAATCCCATCTCCCCTCCCGTCAGCCACTTTCCTCGCCGGAGTTCTCAACCGCCTCTTCGCCGCCCATTCCAACGGCCTCAAGGCCTTGGAACTCTTCAGATTCTGCCTCCACCATTCCCGATCTCCCCCATCTCCCGGCGCGTTCGAGAAAACCCTCCACATCCTCGCCAGAATGCGCTGCTTCGATCACTCATGGGAGCTACTGCGCGAGATCCGAGAAACCCACCCGGGTTTGCTCACTCTCAAGTCCATGAGCATCTTGCTTTCCAAGATCGCGAAGTTTCAATCCTACGAAGAAACCCTCGAAGCGTTTTGGAGATTGGAGAACGAGGTGTTCGTTGAGAGGAGATTTGGTACTGAGGAGTTTAATGTGCTGATTCGAGCTTTCTGTACTCAGCGGCAGATGAAGGAGGCCAGGTCAGTGTTTCATAGGATGTATTCTCGGTTTCCCCCTAATTGTAAAACTATGAATCTGTTGCTTTTAGGGTTTAAGGAATCTAGTGATGTTACTGCTGTTGAGCTTTTCTATCATGAGATGATTAAGAGGGGGTTTAAGCCCAATGCTGTGACTTACAGCATTAGAATTGATGCGTATTGCAAAACGGGTTGTTTTCGTGATGGGTTTCGAGTGTTTGAAGAAATGGAGAGGTCAAATTTCGAGCCTACAATGGAAATAATCACTACTTTGATTCATGGAGCAGGGGTTGTTAAGGATGTAACCAAAGCCCGCCAACTGTTTGATGAAATTACTGTGAGAAACTTTTGCCCTGATATTGGGGCTTATAATGCTTTGATGAGTTCCTTGATTAGGTCGGATGATTTGAAGTCTGCGGCGGCTTTGATGCAAGATATGGAGGCTAAGCACATTGGACTTGACAGTATGACTTATCATATGATGTTCTTAGGCTTTATGAGATTTGAGGATGTTGGTAGTGTTTTGAACTTGTATAGGAAAATGATGGGGCGGAATTTTGTGCCGAAAACACGAACGGTAGTCATGTTGATGAAGTTTTTATGTGAAAATCGTCGAGTTGATTTGGGTTTGGAGATGTGGGGGTATCTAGTAGAGAAGGGTTATTGTCCTCACAGTCATGTATTGGATCTGTTGGTAACTGGATTGTGTGCTCGTGGAATGGTGTTTGAAGCGTTTGAGTGTTCCAAACAAATGTTGGAGAGAGGGAGGCGGATGAGTGACATCGCATTTCGGATCATGGAGAGATCTCTTATGCTGATGCATGGAACAAACAAATTGGGGGAGCTTGAACAGTTGAGGAAGAAGCTTAAAACTGTTCTGCCTCCACCAAAGCAGCTTTCGTCTGAGATTTCACTATCTCCATAG

mRNA sequence

ATGGCGATTCGGAAGAAACTAACCCAAATCCCACAAACGCCCAATTCTTCCAATTCCTTCATCTTCCTCGCCGCTCCTTTTTCCACTCATCAATCCACAGAACCCACAAACGAAATCCACAGAATCGCCAAAATCATCAACGACCATCCATTCCCCGATCAGCCCCTCCGCCCCATTCTCCGTCACCAAATCCCATCTCCCCTCCCGTCAGCCACTTTCCTCGCCGGAGTTCTCAACCGCCTCTTCGCCGCCCATTCCAACGGCCTCAAGGCCTTGGAACTCTTCAGATTCTGCCTCCACCATTCCCGATCTCCCCCATCTCCCGGCGCGTTCGAGAAAACCCTCCACATCCTCGCCAGAATGCGCTGCTTCGATCACTCATGGGAGCTACTGCGCGAGATCCGAGAAACCCACCCGGGTTTGCTCACTCTCAAGTCCATGAGCATCTTGCTTTCCAAGATCGCGAAGTTTCAATCCTACGAAGAAACCCTCGAAGCGTTTTGGAGATTGGAGAACGAGGTGTTCGTTGAGAGGAGATTTGGTACTGAGGAGTTTAATGTGCTGATTCGAGCTTTCTGTACTCAGCGGCAGATGAAGGAGGCCAGGTCAGTGTTTCATAGGATGTATTCTCGGTTTCCCCCTAATTGTAAAACTATGAATCTGTTGCTTTTAGGGTTTAAGGAATCTAGTGATGTTACTGCTGTTGAGCTTTTCTATCATGAGATGATTAAGAGGGGGTTTAAGCCCAATGCTGTGACTTACAGCATTAGAATTGATGCGTATTGCAAAACGGGTTGTTTTCGTGATGGGTTTCGAGTGTTTGAAGAAATGGAGAGGTCAAATTTCGAGCCTACAATGGAAATAATCACTACTTTGATTCATGGAGCAGGGGTTGTTAAGGATGTAACCAAAGCCCGCCAACTGTTTGATGAAATTACTGTGAGAAACTTTTGCCCTGATATTGGGGCTTATAATGCTTTGATGAGTTCCTTGATTAGGTCGGATGATTTGAAGTCTGCGGCGGCTTTGATGCAAGATATGGAGGCTAAGCACATTGGACTTGACAGTATGACTTATCATATGATGTTCTTAGGCTTTATGAGATTTGAGGATGTTGGTAGTGTTTTGAACTTGTATAGGAAAATGATGGGGCGGAATTTTGTGCCGAAAACACGAACGGTAGTCATGTTGATGAAGTTTTTATGTGAAAATCGTCGAGTTGATTTGGGTTTGGAGATGTGGGGGTATCTAGTAGAGAAGGGTTATTGTCCTCACAGTCATGTATTGGATCTGTTGGTAACTGGATTGTGTGCTCGTGGAATGGTGTTTGAAGCGTTTGAGTGTTCCAAACAAATGTTGGAGAGAGGGAGGCGGATGAGTGACATCGCATTTCGGATCATGGAGAGATCTCTTATGCTGATGCATGGAACAAACAAATTGGGGGAGCTTGAACAGTTGAGGAAGAAGCTTAAAACTGTTCTGCCTCCACCAAAGCAGCTTTCGTCTGAGATTTCACTATCTCCATAG

Coding sequence (CDS)

ATGGCGATTCGGAAGAAACTAACCCAAATCCCACAAACGCCCAATTCTTCCAATTCCTTCATCTTCCTCGCCGCTCCTTTTTCCACTCATCAATCCACAGAACCCACAAACGAAATCCACAGAATCGCCAAAATCATCAACGACCATCCATTCCCCGATCAGCCCCTCCGCCCCATTCTCCGTCACCAAATCCCATCTCCCCTCCCGTCAGCCACTTTCCTCGCCGGAGTTCTCAACCGCCTCTTCGCCGCCCATTCCAACGGCCTCAAGGCCTTGGAACTCTTCAGATTCTGCCTCCACCATTCCCGATCTCCCCCATCTCCCGGCGCGTTCGAGAAAACCCTCCACATCCTCGCCAGAATGCGCTGCTTCGATCACTCATGGGAGCTACTGCGCGAGATCCGAGAAACCCACCCGGGTTTGCTCACTCTCAAGTCCATGAGCATCTTGCTTTCCAAGATCGCGAAGTTTCAATCCTACGAAGAAACCCTCGAAGCGTTTTGGAGATTGGAGAACGAGGTGTTCGTTGAGAGGAGATTTGGTACTGAGGAGTTTAATGTGCTGATTCGAGCTTTCTGTACTCAGCGGCAGATGAAGGAGGCCAGGTCAGTGTTTCATAGGATGTATTCTCGGTTTCCCCCTAATTGTAAAACTATGAATCTGTTGCTTTTAGGGTTTAAGGAATCTAGTGATGTTACTGCTGTTGAGCTTTTCTATCATGAGATGATTAAGAGGGGGTTTAAGCCCAATGCTGTGACTTACAGCATTAGAATTGATGCGTATTGCAAAACGGGTTGTTTTCGTGATGGGTTTCGAGTGTTTGAAGAAATGGAGAGGTCAAATTTCGAGCCTACAATGGAAATAATCACTACTTTGATTCATGGAGCAGGGGTTGTTAAGGATGTAACCAAAGCCCGCCAACTGTTTGATGAAATTACTGTGAGAAACTTTTGCCCTGATATTGGGGCTTATAATGCTTTGATGAGTTCCTTGATTAGGTCGGATGATTTGAAGTCTGCGGCGGCTTTGATGCAAGATATGGAGGCTAAGCACATTGGACTTGACAGTATGACTTATCATATGATGTTCTTAGGCTTTATGAGATTTGAGGATGTTGGTAGTGTTTTGAACTTGTATAGGAAAATGATGGGGCGGAATTTTGTGCCGAAAACACGAACGGTAGTCATGTTGATGAAGTTTTTATGTGAAAATCGTCGAGTTGATTTGGGTTTGGAGATGTGGGGGTATCTAGTAGAGAAGGGTTATTGTCCTCACAGTCATGTATTGGATCTGTTGGTAACTGGATTGTGTGCTCGTGGAATGGTGTTTGAAGCGTTTGAGTGTTCCAAACAAATGTTGGAGAGAGGGAGGCGGATGAGTGACATCGCATTTCGGATCATGGAGAGATCTCTTATGCTGATGCATGGAACAAACAAATTGGGGGAGCTTGAACAGTTGAGGAAGAAGCTTAAAACTGTTCTGCCTCCACCAAAGCAGCTTTCGTCTGAGATTTCACTATCTCCATAG

Protein sequence

MAIRKKLTQIPQTPNSSNSFIFLAAPFSTHQSTEPTNEIHRIAKIINDHPFPDQPLRPILRHQIPSPLPSATFLAGVLNRLFAAHSNGLKALELFRFCLHHSRSPPSPGAFEKTLHILARMRCFDHSWELLREIRETHPGLLTLKSMSILLSKIAKFQSYEETLEAFWRLENEVFVERRFGTEEFNVLIRAFCTQRQMKEARSVFHRMYSRFPPNCKTMNLLLLGFKESSDVTAVELFYHEMIKRGFKPNAVTYSIRIDAYCKTGCFRDGFRVFEEMERSNFEPTMEIITTLIHGAGVVKDVTKARQLFDEITVRNFCPDIGAYNALMSSLIRSDDLKSAAALMQDMEAKHIGLDSMTYHMMFLGFMRFEDVGSVLNLYRKMMGRNFVPKTRTVVMLMKFLCENRRVDLGLEMWGYLVEKGYCPHSHVLDLLVTGLCARGMVFEAFECSKQMLERGRRMSDIAFRIMERSLMLMHGTNKLGELEQLRKKLKTVLPPPKQLSSEISLSP

Homology

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BLAST of Sed0027709 vs. NCBI nr
Match: XP_038876095.1 (pentatricopeptide repeat-containing protein At3g61360 [Benincasa hispida] >XP_038876096.1 pentatricopeptide repeat-containing protein At3g61360 [Benincasa hispida])

HSP 1 Score: 804.3 bits (2076), Expect = 6.1e-229
Identity = 402/511 (78.67%), Postives = 442/511 (86.50%), Query Frame = 0


Query: 1   MAIRKKLTQIPQTPNSSNSFIFLAAPFST----HQSTEPTNEIHRIAKIINDHPFPDQPL 60
           MAI ++LTQIPQ P S +SF+  AAPF T    H S++P  E+ RIAKIINDHPFPD PL
Sbjct: 1   MAILQRLTQIPQLPISFHSFLIYAAPFCTHIHLHPSSQPKTEVERIAKIINDHPFPDHPL 60

Query: 61  RPILRHQIPSPLPSATFLAGVLNRLFAAHSNGLKALELFRFCLHHSRSPPSPGAFEKTLH 120
            P L H IPSPLPS TFL  VL RLFAAHSNGLKALELF+FCLHHS+  P+P AFEKTLH
Sbjct: 61  HPTLLHHIPSPLPSNTFLNDVLGRLFAAHSNGLKALELFKFCLHHSQPSPTPDAFEKTLH 120

Query: 121 ILARMRCFDHSWELLREIRETHPGLLTLKSMSILLSKIAKFQSYEETLEAFWRLENEVFV 180
           ILARMR FD SWEL+REI+ THP LLTLKSMSIL+SKIAKFQS+EET+EAF R+ENEVFV
Sbjct: 121 ILARMRYFDQSWELMREIQRTHPFLLTLKSMSILISKIAKFQSFEETIEAFHRMENEVFV 180

Query: 181 ERRFGTEEFNVLIRAFCTQRQMKEARSVFHRMYSRFPPNCKTMNLLLLGFKESSDVTAVE 240
            R+FG EEFNVL+RAFCTQRQMKEARSVF +MYSRFPPN KTMNLLLLGFKESSDVTAVE
Sbjct: 181 GRKFGIEEFNVLLRAFCTQRQMKEARSVFQKMYSRFPPNTKTMNLLLLGFKESSDVTAVE 240

Query: 241 LFYHEMIKRGFKPNAVTYSIRIDAYCKTGCFRDGFRVFEEMERSNFEPTMEIITTLIHGA 300
           LFYHEMI+RGFKPNAVTYSIRIDAYCK G F DG RVFEEMER+  EPT+E ITTLIHGA
Sbjct: 241 LFYHEMIRRGFKPNAVTYSIRIDAYCKRGYFVDGLRVFEEMERAKLEPTLETITTLIHGA 300

Query: 301 GVVKDVTKARQLFDEITVRNFCPDIGAYNALMSSLIRSDDLKSAAALMQDMEAKHIGLDS 360
           GV KD TKARQLFDEIT+RN CPDIGAYNAL+SSLIRS+D+KSAAALM+DMEAKHIG DS
Sbjct: 301 GVAKDKTKARQLFDEITLRNLCPDIGAYNALISSLIRSNDVKSAAALMEDMEAKHIGHDS 360

Query: 361 MTYHMMFLGFMRFEDVGSVLNLYRKMMGRNFVPKTRTVVMLMKFLCENRRVDLGLEMWGY 420
           MTYHM+F G MR EDVG    LY KM+ +NFVPKTRTVVM+MKFLCENRRVDLGL+ WGY
Sbjct: 361 MTYHMLFSGLMRLEDVGGFYELYSKMIRQNFVPKTRTVVMIMKFLCENRRVDLGLDFWGY 420

Query: 421 LVEKGYCPHSHVLDLLVTGLCARGMVFEAFECSKQMLERGRRMSDIAFRIMERSLMLMHG 480
           LVEKGYCPHSHVLDLLVTGLCARGMV +A ECSKQMLERGR+MS+ AF IM+R+L+  H 
Sbjct: 421 LVEKGYCPHSHVLDLLVTGLCARGMVLQASECSKQMLERGRQMSEAAFLIMKRTLLQAHA 480

Query: 481 TNKLGELEQLRKKLKTVLPPPKQLSSEISLS 508
           T+K GELEQLR KL+TVLPPPKQLS EI  S
Sbjct: 481 TDKYGELEQLRNKLQTVLPPPKQLSFEIPAS 511

[Close]

BLAST of Sed0027709 vs. NCBI nr
Match: XP_022929103.1 (pentatricopeptide repeat-containing protein At3g61360 [Cucurbita moschata] >XP_022929104.1 pentatricopeptide repeat-containing protein At3g61360 [Cucurbita moschata] >XP_022929105.1 pentatricopeptide repeat-containing protein At3g61360 [Cucurbita moschata] >XP_022929106.1 pentatricopeptide repeat-containing protein At3g61360 [Cucurbita moschata])

HSP 1 Score: 799.7 bits (2064), Expect = 1.5e-227
Identity = 401/509 (78.78%), Postives = 441/509 (86.64%), Query Frame = 0


Query: 1   MAIRKKLTQIPQTPNSSNSFIFLAAPFST--HQSTEPTNEIHRIAKIINDHPFPDQPLRP 60
           M I  +LTQI Q     +SF+  AAPFST  HQS+EP  EI RI KIINDHPFPDQPLRP
Sbjct: 1   MVIPTRLTQISQIRIFFHSFLIPAAPFSTHLHQSSEPGGEIERITKIINDHPFPDQPLRP 60

Query: 61  ILRHQIPSPLPSATFLAGVLNRLFAAHSNGLKALELFRFCLHHSRSPPSPGAFEKTLHIL 120
            L H IPSPLPS TFL  VL RLFAAHSNGLKALE F+FCLHHS++ P+P AFEKTLHIL
Sbjct: 61  TLLHHIPSPLPSNTFLNDVLGRLFAAHSNGLKALEFFKFCLHHSQASPTPDAFEKTLHIL 120

Query: 121 ARMRCFDHSWELLREIRETHPGLLTLKSMSILLSKIAKFQSYEETLEAFWRLENEVFVER 180
           ARMR FD SWEL+REI+ THP LLTLKSMSILL+KIAKFQS+EET+EAF R+ENEVFV R
Sbjct: 121 ARMRYFDQSWELMREIQRTHPFLLTLKSMSILLTKIAKFQSFEETIEAFRRMENEVFVGR 180

Query: 181 RFGTEEFNVLIRAFCTQRQMKEARSVFHRMYSRFPPNCKTMNLLLLGFKESSDVTAVELF 240
           +FGTEEFNVL+RAFCTQRQMKEARSVF +MYSRFPPN KTMNLLLLGFKESS+VTAVELF
Sbjct: 181 KFGTEEFNVLLRAFCTQRQMKEARSVFLKMYSRFPPNTKTMNLLLLGFKESSNVTAVELF 240

Query: 241 YHEMIKRGFKPNAVTYSIRIDAYCKTGCFRDGFRVFEEMERSNFEPTMEIITTLIHGAGV 300
           YHEMI+RGFKP+AVTYSIR+DAYCK GCF DG RVFEEM+R+ FEPT+E ITTLIHGAGV
Sbjct: 241 YHEMIRRGFKPDAVTYSIRMDAYCKRGCFVDGLRVFEEMKRAKFEPTLETITTLIHGAGV 300

Query: 301 VKDVTKARQLFDEITVRNFCPDIGAYNALMSSLIRSDDLKSAAALMQDMEAKHIGLDSMT 360
            KD+ KARQLFDE+ +RN CPDIGAYNAL+SSLIRSDD+ SAAALM+DMEAKHIG DSMT
Sbjct: 301 AKDIAKARQLFDEMPLRNLCPDIGAYNALISSLIRSDDVNSAAALMEDMEAKHIGHDSMT 360

Query: 361 YHMMFLGFMRFEDVGSVLNLYRKMMGRNFVPKTRTVVMLMKFLCENRRVDLGLEMWGYLV 420
           YHMMF+G M+ EDV     LYRKM+ RNFVPKTRTVVM+MKF CENRRVDLGL++WGYLV
Sbjct: 361 YHMMFVGLMKLEDVHGFYELYRKMIRRNFVPKTRTVVMIMKFFCENRRVDLGLDLWGYLV 420

Query: 421 EKGYCPHSHVLDLLVTGLCARGMVFEAFECSKQMLERGRRMSDIAFRIMERSLMLMHGTN 480
           EKGYCPHSHVLD+LVTGLCARGMV EAFECSKQMLERGR+MSD AF IMERSL+     +
Sbjct: 421 EKGYCPHSHVLDVLVTGLCARGMVHEAFECSKQMLERGRQMSDAAFLIMERSLLQADAKD 480

Query: 481 KLGELEQLRKKLKTVLPPPKQLSSEISLS 508
            LGELEQLRKKLKTVLPPPKQL  EI  S
Sbjct: 481 ILGELEQLRKKLKTVLPPPKQLPYEIPAS 509

[Close]

BLAST of Sed0027709 vs. NCBI nr
Match: KAA0055168.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 797.0 bits (2057), Expect = 9.7e-227
Identity = 398/507 (78.50%), Postives = 437/507 (86.19%), Query Frame = 0


Query: 1   MAIRKKLTQIPQTPNSSNSFIFLAAPFSTHQSTEPTNEIHRIAKIINDHPFPDQPLRPIL 60
           MAI  KLTQIPQ P SS+SF+  AA + TH   + T EI RIAKIINDHPFPDQPL P  
Sbjct: 1   MAILMKLTQIPQKPISSHSFLIYAASYCTHLH-KSTTEIERIAKIINDHPFPDQPLHPTF 60

Query: 61  RHQIPSPLPSATFLAGVLNRLFAAHSNGLKALELFRFCLHHSRSPPSPGAFEKTLHILAR 120
            H IPSPLPS TFL  VL  LFAAHSNGLKALE F+FCLHHS++ P+P AFEKTLHILAR
Sbjct: 61  LHLIPSPLPSNTFLNDVLGHLFAAHSNGLKALEFFKFCLHHSQASPTPDAFEKTLHILAR 120

Query: 121 MRCFDHSWELLREIRETHPGLLTLKSMSILLSKIAKFQSYEETLEAFWRLENEVFVERRF 180
           MR FD SWEL+REIR+THP LLTLKSMSILLS+IAKF+S+EET+EAF R+ENEVFV R+F
Sbjct: 121 MRYFDQSWELMREIRQTHPFLLTLKSMSILLSRIAKFRSFEETIEAFQRMENEVFVGRKF 180

Query: 181 GTEEFNVLIRAFCTQRQMKEARSVFHRMYSRFPPNCKTMNLLLLGFKESSDVTAVELFYH 240
           GTEEFNVL+RAFCTQRQMKEARSVFH+MYSRFPPN KT+NLLLLGFKESSD+T+VELFYH
Sbjct: 181 GTEEFNVLLRAFCTQRQMKEARSVFHKMYSRFPPNIKTINLLLLGFKESSDITSVELFYH 240

Query: 241 EMIKRGFKPNAVTYSIRIDAYCKTGCFRDGFRVFEEMERSNFEPTMEIITTLIHGAGVVK 300
           EMIKRGFKPNAVTYSIRIDAYCK GCF DG RVF+EMER+  EPT+E ITTLIHGAG+VK
Sbjct: 241 EMIKRGFKPNAVTYSIRIDAYCKKGCFVDGLRVFKEMERAKLEPTLETITTLIHGAGIVK 300

Query: 301 DVTKARQLFDEITVRNFCPDIGAYNALMSSLIRSDDLKSAAALMQDMEAKHIGLDSMTYH 360
           D TKARQLFDEI +RN CPDIGAYNAL+SSLIRS D+KSAAALM+DMEAKHIG DS+TYH
Sbjct: 301 DKTKARQLFDEIPLRNLCPDIGAYNALISSLIRSGDVKSAAALMEDMEAKHIGHDSVTYH 360

Query: 361 MMFLGFMRFEDVGSVLNLYRKMMGRNFVPKTRTVVMLMKFLCENRRVDLGLEMWGYLVEK 420
           MMFLG +R EDVG    LY KM+ +NFVPKTRT VM+MKF CENRRVDL L  W YLVEK
Sbjct: 361 MMFLGLIRLEDVGGFRELYSKMVRQNFVPKTRTTVMIMKFFCENRRVDLALGFWAYLVEK 420

Query: 421 GYCPHSHVLDLLVTGLCARGMVFEAFECSKQMLERGRRMSDIAFRIMERSLMLMHGTNKL 480
           GYCPHSHVLDLLVTGLCARGMV +AFECSKQMLERGR+MS+ AF IMERSL+    T+K 
Sbjct: 421 GYCPHSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMERSLLKARATDKY 480

Query: 481 GELEQLRKKLKTVLPPPKQLSSEISLS 508
           GELEQLRKKLKTVLPPP QL SEI  S
Sbjct: 481 GELEQLRKKLKTVLPPPNQLLSEIPAS 506

[Close]

BLAST of Sed0027709 vs. NCBI nr
Match: KAG6579688.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 796.6 bits (2056), Expect = 1.3e-226
Identity = 400/509 (78.59%), Postives = 440/509 (86.44%), Query Frame = 0


Query: 1   MAIRKKLTQIPQTPNSSNSFIFLAAPFST--HQSTEPTNEIHRIAKIINDHPFPDQPLRP 60
           M I  +LTQI Q     +SF+  AAPFST  HQS+EP  EI RI KIINDHPFPDQPLRP
Sbjct: 1   MVIPTRLTQISQIRIFFHSFLIPAAPFSTHLHQSSEPGGEIERITKIINDHPFPDQPLRP 60

Query: 61  ILRHQIPSPLPSATFLAGVLNRLFAAHSNGLKALELFRFCLHHSRSPPSPGAFEKTLHIL 120
            L H IPSPLPS TFL  VL RLFAAHSNGLKALE F+FCLHHS++ P+P AFEKTLHIL
Sbjct: 61  TLLHHIPSPLPSNTFLNDVLGRLFAAHSNGLKALEFFKFCLHHSQASPTPDAFEKTLHIL 120

Query: 121 ARMRCFDHSWELLREIRETHPGLLTLKSMSILLSKIAKFQSYEETLEAFWRLENEVFVER 180
           ARMR FD SWEL+REI+ THP LLTLKSMSILL+KIAKFQS+EET+EAF R+ENEVFV R
Sbjct: 121 ARMRYFDQSWELMREIQRTHPFLLTLKSMSILLTKIAKFQSFEETIEAFRRMENEVFVGR 180

Query: 181 RFGTEEFNVLIRAFCTQRQMKEARSVFHRMYSRFPPNCKTMNLLLLGFKESSDVTAVELF 240
           +FGTEEFNVL+RAFCTQRQMKEARSVF +MYSRFPPN KTMNLLLLGFKESS+VTAVELF
Sbjct: 181 KFGTEEFNVLLRAFCTQRQMKEARSVFLKMYSRFPPNTKTMNLLLLGFKESSNVTAVELF 240

Query: 241 YHEMIKRGFKPNAVTYSIRIDAYCKTGCFRDGFRVFEEMERSNFEPTMEIITTLIHGAGV 300
           YHEMI+RGFKP+AVTYSIR+DAYCK GCF DG RVFEEM+R+ FEPT+E ITTLIHGAGV
Sbjct: 241 YHEMIRRGFKPDAVTYSIRMDAYCKRGCFVDGLRVFEEMKRAKFEPTLETITTLIHGAGV 300

Query: 301 VKDVTKARQLFDEITVRNFCPDIGAYNALMSSLIRSDDLKSAAALMQDMEAKHIGLDSMT 360
            KD+ KARQLFDE+ +RN CPDIGAYNAL+SSLIRSDD+ SAAALM+DMEAKHIG DSMT
Sbjct: 301 AKDIAKARQLFDEMPLRNLCPDIGAYNALISSLIRSDDVNSAAALMEDMEAKHIGHDSMT 360

Query: 361 YHMMFLGFMRFEDVGSVLNLYRKMMGRNFVPKTRTVVMLMKFLCENRRVDLGLEMWGYLV 420
           YHMMF+G M+ EDV     LYRKM+ RNFVPKTRTVVM+MKF CENRRVDLGL++WGYLV
Sbjct: 361 YHMMFVGLMKLEDVHGFYELYRKMIRRNFVPKTRTVVMIMKFFCENRRVDLGLDLWGYLV 420

Query: 421 EKGYCPHSHVLDLLVTGLCARGMVFEAFECSKQMLERGRRMSDIAFRIMERSLMLMHGTN 480
           EKGYCPHSHVLD+LVTGLCARGMV EAFECSKQMLERGR+MSD AF IMERSL+     +
Sbjct: 421 EKGYCPHSHVLDVLVTGLCARGMVHEAFECSKQMLERGRQMSDAAFLIMERSLLQADAKD 480

Query: 481 KLGELEQLRKKLKTVLPPPKQLSSEISLS 508
            L ELEQLRKKLKTVLPPPKQL  EI  S
Sbjct: 481 ILRELEQLRKKLKTVLPPPKQLPYEIPAS 509

[Close]

BLAST of Sed0027709 vs. NCBI nr
Match: KAG7017131.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 796.6 bits (2056), Expect = 1.3e-226
Identity = 399/509 (78.39%), Postives = 439/509 (86.25%), Query Frame = 0


Query: 1   MAIRKKLTQIPQTPNSSNSFIFLAAPFST--HQSTEPTNEIHRIAKIINDHPFPDQPLRP 60
           M I  +LTQI Q    S SF+  AAPFST  HQS+EP  EI RI KIINDHPFPDQPLRP
Sbjct: 1   MVIPTRLTQIAQIRIFSRSFLIPAAPFSTHLHQSSEPGGEIERITKIINDHPFPDQPLRP 60

Query: 61  ILRHQIPSPLPSATFLAGVLNRLFAAHSNGLKALELFRFCLHHSRSPPSPGAFEKTLHIL 120
            L H IPSPLPS TFL  VL RLFAAHSNGLKALE F+FCLHH ++ P+P AFEKTLHIL
Sbjct: 61  TLLHHIPSPLPSNTFLNDVLGRLFAAHSNGLKALEFFKFCLHHCQASPTPDAFEKTLHIL 120

Query: 121 ARMRCFDHSWELLREIRETHPGLLTLKSMSILLSKIAKFQSYEETLEAFWRLENEVFVER 180
           ARMR FD SWEL+REI+ THP LLTLKSMSILL+KIAKFQS+EET+EAF R+ENEVFV R
Sbjct: 121 ARMRYFDQSWELMREIQRTHPFLLTLKSMSILLTKIAKFQSFEETIEAFRRMENEVFVGR 180

Query: 181 RFGTEEFNVLIRAFCTQRQMKEARSVFHRMYSRFPPNCKTMNLLLLGFKESSDVTAVELF 240
           +FGTEEFNVL+RAFCTQRQMKEARSVF +MYSRFPPN KTMNLLLLGFKESS+VTAVELF
Sbjct: 181 KFGTEEFNVLLRAFCTQRQMKEARSVFLKMYSRFPPNTKTMNLLLLGFKESSNVTAVELF 240

Query: 241 YHEMIKRGFKPNAVTYSIRIDAYCKTGCFRDGFRVFEEMERSNFEPTMEIITTLIHGAGV 300
           YHEMI+RGFKP+AVTYSIR+DAYCK GCF DG RVFEEM+R+ FEPT+E ITTLIHGAGV
Sbjct: 241 YHEMIRRGFKPDAVTYSIRMDAYCKRGCFVDGLRVFEEMKRAKFEPTLETITTLIHGAGV 300

Query: 301 VKDVTKARQLFDEITVRNFCPDIGAYNALMSSLIRSDDLKSAAALMQDMEAKHIGLDSMT 360
            KD+ KARQLFDE+ +RN CPDIGAYNAL+SSLIRSDD+ SAAALM+DMEAKHIG DSMT
Sbjct: 301 AKDIAKARQLFDEMPLRNLCPDIGAYNALISSLIRSDDVNSAAALMEDMEAKHIGHDSMT 360

Query: 361 YHMMFLGFMRFEDVGSVLNLYRKMMGRNFVPKTRTVVMLMKFLCENRRVDLGLEMWGYLV 420
           YHMMF+G M+ EDV     LY KM+ RNFVPKTRTVVM+MKF CENRRVDLGL++WGYLV
Sbjct: 361 YHMMFVGLMKLEDVHGFYELYSKMIRRNFVPKTRTVVMIMKFFCENRRVDLGLDLWGYLV 420

Query: 421 EKGYCPHSHVLDLLVTGLCARGMVFEAFECSKQMLERGRRMSDIAFRIMERSLMLMHGTN 480
           EKGYCPHSHVLD+LVTGLCARGMV EAFECSKQMLERGR+MSD AF IMERSL+     +
Sbjct: 421 EKGYCPHSHVLDVLVTGLCARGMVHEAFECSKQMLERGRQMSDAAFLIMERSLLQADAKD 480

Query: 481 KLGELEQLRKKLKTVLPPPKQLSSEISLS 508
            LGELEQLRKKLKTVLPPPKQL  E+  S
Sbjct: 481 ILGELEQLRKKLKTVLPPPKQLPYELPAS 509

[Close]

BLAST of Sed0027709 vs. ExPASy Swiss-Prot
Match: Q9M2C8 (Pentatricopeptide repeat-containing protein At3g61360 OS=Arabidopsis thaliana OX=3702 GN=At3g61360 PE=2 SV=1)

HSP 1 Score: 540.4 bits (1391), Expect = 2.1e-152
Identity = 274/490 (55.92%), Postives = 361/490 (73.67%), Query Frame = 0


Query: 16  SSNSFIFLAAP-FSTHQSTEPTN----EIHRIAKIINDHPFPDQPLRPILRHQIPSPLPS 75
           SS+S+  L AP  S+  S   T+    EI RI  IIN HPFP+ P++PIL   IP    S
Sbjct: 6   SSDSYRRLLAPVLSSSSSLSSTSINRTEIERITIIINGHPFPNHPIQPILAKHIPLSSLS 65

Query: 76  ATFLAGVLNRLFAAHSNGLKALELFRFCLHHSRSPPSPGAFEKTLHILARMRCFDHSWEL 135
             F++ VL RLFAAHSNGLKALE F++ L  S+S P+  +FEKTLHILARMR FD +W L
Sbjct: 66  PEFVSEVLGRLFAAHSNGLKALEFFKYSLKSSKSSPTSDSFEKTLHILARMRYFDQAWAL 125

Query: 136 LREIRETHPGLLTLKSMSILLSKIAKFQSYEETLEAFWRLENEVFVERRFGTEEFNVLIR 195
           + E+R+ +P LL+ KSMSILL KIAKF SYEETLEAF ++E E+F  ++FG +EFN+L+R
Sbjct: 126 MAEVRKDYPNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIF-RKKFGVDEFNILLR 185

Query: 196 AFCTQRQMKEARSVFHRMYSRFPPNCKTMNLLLLGFKESSDVTAVELFYHEMIKRGFKPN 255
           AFCT+R+MKEARS+F +++SRF P+ KTMN+LLLGFKE+ DVTA ELFYHEM+KRGFKPN
Sbjct: 186 AFCTEREMKEARSIFEKLHSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPN 245

Query: 256 AVTYSIRIDAYCKTGCFRDGFRVFEEMERSNFEPTMEIITTLIHGAGVVKDVTKARQLFD 315
           +VTY IRID +CK   F +  R+FE+M+R +F+ T++I+TTLIHG+GV ++  KARQLFD
Sbjct: 246 SVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFD 305

Query: 316 EITVRNFCPDIGAYNALMSSLIRSDDLKSAAALMQDMEAKHIGLDSMTYHMMFLGFMRFE 375
           EI+ R   PD GAYNALMSSL++  D+  A  +M++ME K I  DS+T+H MF+G M+ +
Sbjct: 306 EISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSK 365

Query: 376 DVG--SVLNLYRKMMGRNFVPKTRTVVMLMKFLCENRRVDLGLEMWGYLVEKGYCPHSHV 435
           + G   V   Y+KM  R+ VPKT T+VMLMK  C N  V+LGL++W Y++EKGYCPH H 
Sbjct: 366 EFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHA 425

Query: 436 LDLLVTGLCARGMVFEAFECSKQMLERGRRMSDIAFRIMERSLMLMHGTNKLGELEQLRK 495
           L+LL T LCAR    +AFECS Q +ERGR +S+  +R++E SL   +   KL EL++  +
Sbjct: 426 LELLTTALCARRRANDAFECSWQTVERGRCVSEPVYRMLETSLSSNNELKKLEELKEEIQ 485

Query: 496 KLKTVLPPPK 499
           KL + LPPP+
Sbjct: 486 KLHSFLPPPE 494

[Close]

BLAST of Sed0027709 vs. ExPASy Swiss-Prot
Match: Q9FZ19 (Putative pentatricopeptide repeat-containing protein At1g02420 OS=Arabidopsis thaliana OX=3702 GN=At1g02420 PE=3 SV=2)

HSP 1 Score: 236.5 bits (602), Expect = 6.6e-61
Identity = 133/414 (32.13%), Postives = 226/414 (54.59%), Query Frame = 0


Query: 77  VLNRLFAAHSNGLKALELFRFCLHHSRSPPSPGAFEKTLHILARMRCFDHSWELLREIRE 136
           VL R+  +H N ++ LE +R+         S  + +  L+IL R R FD  WELL E + 
Sbjct: 77  VLKRVRFSHGNPIQTLEFYRYASAIRGFYHSSFSLDTMLYILGRNRKFDQIWELLIETKR 136

Query: 137 THPGLLTLKSMSILLSKIAKFQSYEETLEAFWRLENEVFVERRFGTEEFNVLIRAFCTQR 196
               L++ ++M ++L ++AK  S  +T+E+FW+ +    V   F T  FN L+R  C ++
Sbjct: 137 KDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKR--LVPDFFDTACFNALLRTLCQEK 196

Query: 197 QMKEARSVFHRMYSRFPPNCKTMNLLLLGFKESSDVTAVELFYHEMIKRGFKPNAVTYSI 256
            M +AR+V+H +  +F P+ +T N+LL G+K S +    E F+ EM  +G KP+ VTY+ 
Sbjct: 197 SMTDARNVYHSLKHQFQPDLQTFNILLSGWKSSEE---AEAFFEEMKGKGLKPDVVTYNS 256

Query: 257 RIDAYCKTGCFRDGFRVFEEMERSNFEPTMEIITTLIHGAGVVKDVTKARQLFDEITVRN 316
            ID YCK       +++ ++M      P +   TT+I G G++    KAR++  E+    
Sbjct: 257 LIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYG 316

Query: 317 FCPDIGAYNALMSSLIRSDDLKSAAALMQDMEAKHIGLDSMTYHMMFLGFMRFEDVGSVL 376
             PD+ AYNA + +   +  L  A  L+ +M  K +  ++ TY++ F       D+G   
Sbjct: 317 CYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSW 376

Query: 377 NLYRKMMGRNFVPKTRTVVMLMKFLCENRRVDLGLEMWGYLVEKGYCPHSHVLDLLVTGL 436
            LY +M+G   +P T++ + L+K    + +VD+ + +W  +V KG+  +S V D+L+  L
Sbjct: 377 ELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLVSDVLLDLL 436

Query: 437 CARGMVFEAFECSKQMLERGRRMSDIAFRIMERSLMLMHGTNKLGELEQLRKKL 491
           C    V EA +C  +M+E+G R S+++F+   R  +LM   NK  E+  L +K+
Sbjct: 437 CDLAKVEEAEKCLLEMVEKGHRPSNVSFK---RIKLLMELANKHDEVNNLIQKM 482

[Close]

BLAST of Sed0027709 vs. ExPASy Swiss-Prot
Match: Q9C9A2 (Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g71060 PE=2 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 5.5e-39
Identity = 123/491 (25.05%), Postives = 235/491 (47.86%), Query Frame = 0


Query: 7   LTQIPQTPNSSNSFI---FLAAPFSTHQS-TEPTNEIHRIAKIINDHPFPDQPLRPILRH 66
           L  IP    +SN  +   F A+   T  S  + + +  RI KI+    F D  +  +L  
Sbjct: 30  LESIPWIHKASNFTLYGSFHASSVETQVSANDASQDAERICKILT--KFTDSKVETLLNE 89

Query: 67  QIPSPLPSATFLAGVLNRLFAAHSNGLKALELFRFCLHHSRSPPSPGAFEKTLHILARMR 126
              S   S   +  VL +L  A   G+ AL +F++  +      +   +   +  L +++
Sbjct: 90  --ASVKLSPALIEEVLKKLSNA---GVLALSVFKWAENQKGFKHTTSNYNALIESLGKIK 149

Query: 127 CFDHSWELLREIRETHPGLLTLKSMSILLSKIAKFQSYEETLEAFWRLENEVFVERRFGT 186
            F   W L+ +++     LL+ ++ +++  + A+ +  +E + AF ++E   F   +  +
Sbjct: 150 QFKLIWSLVDDMKAKK--LLSKETFALISRRYARARKVKEAIGAFHKMEEFGF---KMES 209

Query: 187 EEFNVLIRAFCTQRQMKEARSVFHRM-YSRFPPNCKTMNLLLLGFKESSDVTAVELFYHE 246
            +FN ++      R + +A+ VF +M   RF P+ K+  +LL G+ +  ++  V+    E
Sbjct: 210 SDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNRE 269

Query: 247 MIKRGFKPNAVTYSIRIDAYCKTGCFRDGFRVFEEMERSNFEPTMEIITTLIHGAGVVKD 306
           M   GF+P+ V Y I I+A+CK   + +  R F EME+ N +P+  I  +LI+G G  K 
Sbjct: 270 MKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKK 329

Query: 307 VTKARQLFDEITVRNFCPDIGAYNALMSSLIRSDDLKSAAALMQDMEAKHIGLDSMTYHM 366
           +  A + F+      F  +   YNAL+ +   S  ++ A   + +M  K +G ++ TY +
Sbjct: 330 LNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDI 389

Query: 367 MFLGFMRFEDVGSVLNLYRKMMGRNFVPKTRTVVMLMKFLCENRRVDLGLEMWGYLVEKG 426
           +    +R +       +Y+ M   +  P   T  ++++  C   R+D+ +++W  +  KG
Sbjct: 390 ILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKG 449

Query: 427 YCPHSHVLDLLVTGLCARGMVFEAFECSKQMLERGRRMSDIAFRIMERSLMLMHGTNKLG 486
             P  H+   L+T LC    + EA E   +ML+ G R     F  ++++L+     +K+ 
Sbjct: 450 VLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVT 505

Query: 487 EL----EQLRK 489
           +L    ++LRK
Sbjct: 510 DLVVKMDRLRK 505

[Close]

BLAST of Sed0027709 vs. ExPASy Swiss-Prot
Match: Q9FVX2 (Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g77360 PE=2 SV=2)

HSP 1 Score: 161.8 bits (408), Expect = 2.1e-38
Identity = 99/396 (25.00%), Postives = 195/396 (49.24%), Query Frame = 0


Query: 77  VLNRLFAAHSNGLKALELFRFCLHHSRSPPSPGAFEKTLHILARMRCFDHSWELLREIRE 136
           VLNR     + GL     F++         S  A+   +   A++R +   W+L+  +R+
Sbjct: 106 VLNRF---RNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRK 165

Query: 137 THPGLLTLKSMSILLSKIAKFQSYEETLEAFWRLENEVFVERRFGTEEFNVLIRAFCTQR 196
               +L +++  I++ K A+ Q  +E + AF  +E     +       FN L+ A C  +
Sbjct: 166 KK--MLNVETFCIVMRKYARAQKVDEAIYAFNVMEK---YDLPPNLVAFNGLLSALCKSK 225

Query: 197 QMKEARSVFHRMYSRFPPNCKTMNLLLLGFKESSDVTAVELFYHEMIKRGFKPNAVTYSI 256
            +++A+ VF  M  RF P+ KT ++LL G+ +  ++      + EMI  G  P+ VTYSI
Sbjct: 226 NVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSI 285

Query: 257 RIDAYCKTGCFRDGFRVFEEMERSNFEPTMEIITTLIHGAGVVKDVTKARQLFDEITVRN 316
            +D  CK G   +   +   M+ S  +PT  I + L+H  G    + +A   F E+    
Sbjct: 286 MVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSG 345

Query: 317 FCPDIGAYNALMSSLIRSDDLKSAAALMQDMEAKHIGLDSMTYHMMFLGFMRFEDVGSVL 376
              D+  +N+L+ +  +++ +K+   ++++M++K +  +S + +++    +   +     
Sbjct: 346 MKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAF 405

Query: 377 NLYRKMMGRNFVPKTRTVVMLMKFLCENRRVDLGLEMWGYLVEKGYCPHSHVLDLLVTGL 436
           +++RKM+ +   P   T  M++K  CE + ++   ++W Y+ +KG  P  H   +L+ GL
Sbjct: 406 DVFRKMI-KVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGL 465

Query: 437 CARGMVFEAFECSKQMLERGRRMSDIAFRIMERSLM 473
           C      +A    ++M+E G R S + F  + + L+
Sbjct: 466 CEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLI 492

[Close]

BLAST of Sed0027709 vs. ExPASy Swiss-Prot
Match: Q9LUJ4 (Pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22670 PE=2 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 2.9e-32
Identity = 90/350 (25.71%), Postives = 164/350 (46.86%), Query Frame = 0


Query: 111 FEKTLHILARMRCFDHSWELLREIRETHPG-LLTLKSMSILLSKIAKFQSYEETLEAFWR 170
           +   + +L + R FD  WEL+ E+ +     L+TL +MS ++ ++AK   Y + ++AF  
Sbjct: 169 YNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLE 228

Query: 171 LENEVFVERRFGTEEFNVLIRAFCTQRQMKEARSVFHRMYSRFPPNCKTMNLLLLGFKES 230
           +E    V  +  T   N L+ A   +  ++ A  VF +++    P+ +T N+L+ GF ++
Sbjct: 229 MEKSYGV--KTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGFCKA 288

Query: 231 SDVTAVELFYHEMIKRGFKPNAVTYSIRIDAYCKTGCFRDGFRVFEEMERSNFEPTMEII 290
                       M    F P+ VTY+  ++AYCK G FR    + EEM  +   P +   
Sbjct: 289 RKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTY 348

Query: 291 TTLIHGAGVVKDVTKARQLFDEITVRNFCPDIGAYNALMSSLIRSDDLKSAAALMQDMEA 350
           T ++H  G  K V +A  +++++      PD   Y++L+  L ++   K AA + +DM  
Sbjct: 349 TIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTN 408

Query: 351 KHIGLDSMTYHMMFLGFMRFEDVGSVLNLYRKM---MGRNFVPKTRTVVMLMKFLCENRR 410
           + +  D + Y+ M    +        L L ++M    G +  P   T   L+K  C  ++
Sbjct: 409 QGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKK 468

Query: 411 VDLGLEMWGYLVEKGYCPHSHVLDLLVTGLCARGMVFEAFECSKQMLERG 457
           + L   +  ++V+           LL+ GLC  G V EA    ++ + +G
Sbjct: 469 MKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKG 516

[Close]

BLAST of Sed0027709 vs. ExPASy TrEMBL
Match: A0A6J1EM60 (pentatricopeptide repeat-containing protein At3g61360 OS=Cucurbita moschata OX=3662 GN=LOC111435788 PE=4 SV=1)

HSP 1 Score: 799.7 bits (2064), Expect = 7.3e-228
Identity = 401/509 (78.78%), Postives = 441/509 (86.64%), Query Frame = 0


Query: 1   MAIRKKLTQIPQTPNSSNSFIFLAAPFST--HQSTEPTNEIHRIAKIINDHPFPDQPLRP 60
           M I  +LTQI Q     +SF+  AAPFST  HQS+EP  EI RI KIINDHPFPDQPLRP
Sbjct: 1   MVIPTRLTQISQIRIFFHSFLIPAAPFSTHLHQSSEPGGEIERITKIINDHPFPDQPLRP 60

Query: 61  ILRHQIPSPLPSATFLAGVLNRLFAAHSNGLKALELFRFCLHHSRSPPSPGAFEKTLHIL 120
            L H IPSPLPS TFL  VL RLFAAHSNGLKALE F+FCLHHS++ P+P AFEKTLHIL
Sbjct: 61  TLLHHIPSPLPSNTFLNDVLGRLFAAHSNGLKALEFFKFCLHHSQASPTPDAFEKTLHIL 120

Query: 121 ARMRCFDHSWELLREIRETHPGLLTLKSMSILLSKIAKFQSYEETLEAFWRLENEVFVER 180
           ARMR FD SWEL+REI+ THP LLTLKSMSILL+KIAKFQS+EET+EAF R+ENEVFV R
Sbjct: 121 ARMRYFDQSWELMREIQRTHPFLLTLKSMSILLTKIAKFQSFEETIEAFRRMENEVFVGR 180

Query: 181 RFGTEEFNVLIRAFCTQRQMKEARSVFHRMYSRFPPNCKTMNLLLLGFKESSDVTAVELF 240
           +FGTEEFNVL+RAFCTQRQMKEARSVF +MYSRFPPN KTMNLLLLGFKESS+VTAVELF
Sbjct: 181 KFGTEEFNVLLRAFCTQRQMKEARSVFLKMYSRFPPNTKTMNLLLLGFKESSNVTAVELF 240

Query: 241 YHEMIKRGFKPNAVTYSIRIDAYCKTGCFRDGFRVFEEMERSNFEPTMEIITTLIHGAGV 300
           YHEMI+RGFKP+AVTYSIR+DAYCK GCF DG RVFEEM+R+ FEPT+E ITTLIHGAGV
Sbjct: 241 YHEMIRRGFKPDAVTYSIRMDAYCKRGCFVDGLRVFEEMKRAKFEPTLETITTLIHGAGV 300

Query: 301 VKDVTKARQLFDEITVRNFCPDIGAYNALMSSLIRSDDLKSAAALMQDMEAKHIGLDSMT 360
            KD+ KARQLFDE+ +RN CPDIGAYNAL+SSLIRSDD+ SAAALM+DMEAKHIG DSMT
Sbjct: 301 AKDIAKARQLFDEMPLRNLCPDIGAYNALISSLIRSDDVNSAAALMEDMEAKHIGHDSMT 360

Query: 361 YHMMFLGFMRFEDVGSVLNLYRKMMGRNFVPKTRTVVMLMKFLCENRRVDLGLEMWGYLV 420
           YHMMF+G M+ EDV     LYRKM+ RNFVPKTRTVVM+MKF CENRRVDLGL++WGYLV
Sbjct: 361 YHMMFVGLMKLEDVHGFYELYRKMIRRNFVPKTRTVVMIMKFFCENRRVDLGLDLWGYLV 420

Query: 421 EKGYCPHSHVLDLLVTGLCARGMVFEAFECSKQMLERGRRMSDIAFRIMERSLMLMHGTN 480
           EKGYCPHSHVLD+LVTGLCARGMV EAFECSKQMLERGR+MSD AF IMERSL+     +
Sbjct: 421 EKGYCPHSHVLDVLVTGLCARGMVHEAFECSKQMLERGRQMSDAAFLIMERSLLQADAKD 480

Query: 481 KLGELEQLRKKLKTVLPPPKQLSSEISLS 508
            LGELEQLRKKLKTVLPPPKQL  EI  S
Sbjct: 481 ILGELEQLRKKLKTVLPPPKQLPYEIPAS 509

[Close]

BLAST of Sed0027709 vs. ExPASy TrEMBL
Match: A0A5A7UJI2 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G001000 PE=4 SV=1)

HSP 1 Score: 797.0 bits (2057), Expect = 4.7e-227
Identity = 398/507 (78.50%), Postives = 437/507 (86.19%), Query Frame = 0


Query: 1   MAIRKKLTQIPQTPNSSNSFIFLAAPFSTHQSTEPTNEIHRIAKIINDHPFPDQPLRPIL 60
           MAI  KLTQIPQ P SS+SF+  AA + TH   + T EI RIAKIINDHPFPDQPL P  
Sbjct: 1   MAILMKLTQIPQKPISSHSFLIYAASYCTHLH-KSTTEIERIAKIINDHPFPDQPLHPTF 60

Query: 61  RHQIPSPLPSATFLAGVLNRLFAAHSNGLKALELFRFCLHHSRSPPSPGAFEKTLHILAR 120
            H IPSPLPS TFL  VL  LFAAHSNGLKALE F+FCLHHS++ P+P AFEKTLHILAR
Sbjct: 61  LHLIPSPLPSNTFLNDVLGHLFAAHSNGLKALEFFKFCLHHSQASPTPDAFEKTLHILAR 120

Query: 121 MRCFDHSWELLREIRETHPGLLTLKSMSILLSKIAKFQSYEETLEAFWRLENEVFVERRF 180
           MR FD SWEL+REIR+THP LLTLKSMSILLS+IAKF+S+EET+EAF R+ENEVFV R+F
Sbjct: 121 MRYFDQSWELMREIRQTHPFLLTLKSMSILLSRIAKFRSFEETIEAFQRMENEVFVGRKF 180

Query: 181 GTEEFNVLIRAFCTQRQMKEARSVFHRMYSRFPPNCKTMNLLLLGFKESSDVTAVELFYH 240
           GTEEFNVL+RAFCTQRQMKEARSVFH+MYSRFPPN KT+NLLLLGFKESSD+T+VELFYH
Sbjct: 181 GTEEFNVLLRAFCTQRQMKEARSVFHKMYSRFPPNIKTINLLLLGFKESSDITSVELFYH 240

Query: 241 EMIKRGFKPNAVTYSIRIDAYCKTGCFRDGFRVFEEMERSNFEPTMEIITTLIHGAGVVK 300
           EMIKRGFKPNAVTYSIRIDAYCK GCF DG RVF+EMER+  EPT+E ITTLIHGAG+VK
Sbjct: 241 EMIKRGFKPNAVTYSIRIDAYCKKGCFVDGLRVFKEMERAKLEPTLETITTLIHGAGIVK 300

Query: 301 DVTKARQLFDEITVRNFCPDIGAYNALMSSLIRSDDLKSAAALMQDMEAKHIGLDSMTYH 360
           D TKARQLFDEI +RN CPDIGAYNAL+SSLIRS D+KSAAALM+DMEAKHIG DS+TYH
Sbjct: 301 DKTKARQLFDEIPLRNLCPDIGAYNALISSLIRSGDVKSAAALMEDMEAKHIGHDSVTYH 360

Query: 361 MMFLGFMRFEDVGSVLNLYRKMMGRNFVPKTRTVVMLMKFLCENRRVDLGLEMWGYLVEK 420
           MMFLG +R EDVG    LY KM+ +NFVPKTRT VM+MKF CENRRVDL L  W YLVEK
Sbjct: 361 MMFLGLIRLEDVGGFRELYSKMVRQNFVPKTRTTVMIMKFFCENRRVDLALGFWAYLVEK 420

Query: 421 GYCPHSHVLDLLVTGLCARGMVFEAFECSKQMLERGRRMSDIAFRIMERSLMLMHGTNKL 480
           GYCPHSHVLDLLVTGLCARGMV +AFECSKQMLERGR+MS+ AF IMERSL+    T+K 
Sbjct: 421 GYCPHSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMERSLLKARATDKY 480

Query: 481 GELEQLRKKLKTVLPPPKQLSSEISLS 508
           GELEQLRKKLKTVLPPP QL SEI  S
Sbjct: 481 GELEQLRKKLKTVLPPPNQLLSEIPAS 506

[Close]

BLAST of Sed0027709 vs. ExPASy TrEMBL
Match: A0A5D3BMK0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1728G00390 PE=4 SV=1)

HSP 1 Score: 796.2 bits (2055), Expect = 8.0e-227
Identity = 398/507 (78.50%), Postives = 437/507 (86.19%), Query Frame = 0


Query: 1   MAIRKKLTQIPQTPNSSNSFIFLAAPFSTHQSTEPTNEIHRIAKIINDHPFPDQPLRPIL 60
           MAI  KLTQIPQ P SS+SF+  AA + TH   + T EI RIAKIINDHPFPDQPL P L
Sbjct: 1   MAILMKLTQIPQKPISSHSFLIYAASYCTHLH-KSTTEIERIAKIINDHPFPDQPLHPTL 60

Query: 61  RHQIPSPLPSATFLAGVLNRLFAAHSNGLKALELFRFCLHHSRSPPSPGAFEKTLHILAR 120
            H IPSPLPS TFL  VL  LFAAHSNGLKALE F+FCLHHS++ P+P AFEKTLHILAR
Sbjct: 61  LHLIPSPLPSNTFLNDVLGHLFAAHSNGLKALEFFKFCLHHSQASPTPDAFEKTLHILAR 120

Query: 121 MRCFDHSWELLREIRETHPGLLTLKSMSILLSKIAKFQSYEETLEAFWRLENEVFVERRF 180
           MR FD SWEL+REIR+THP LLTLKSMSILLS+IAKF+S+EET+EAF R+ENEVFV R+F
Sbjct: 121 MRYFDQSWELMREIRQTHPFLLTLKSMSILLSRIAKFRSFEETIEAFQRMENEVFVGRKF 180

Query: 181 GTEEFNVLIRAFCTQRQMKEARSVFHRMYSRFPPNCKTMNLLLLGFKESSDVTAVELFYH 240
           GTEEFNVL+RAFCTQRQMKEARSVFH+MYSRFPPN KT+NLLLLGFKESSD+T+VELFYH
Sbjct: 181 GTEEFNVLLRAFCTQRQMKEARSVFHKMYSRFPPNIKTINLLLLGFKESSDITSVELFYH 240

Query: 241 EMIKRGFKPNAVTYSIRIDAYCKTGCFRDGFRVFEEMERSNFEPTMEIITTLIHGAGVVK 300
           EMIKRGFKPNAVTYSIRIDAYCK GCF DG RVF+EMER+  EPT+E ITTLIHGAG+VK
Sbjct: 241 EMIKRGFKPNAVTYSIRIDAYCKKGCFVDGLRVFKEMERAKLEPTLETITTLIHGAGIVK 300

Query: 301 DVTKARQLFDEITVRNFCPDIGAYNALMSSLIRSDDLKSAAALMQDMEAKHIGLDSMTYH 360
           D TKARQLFDEI +RN CPDIGAYNAL+SSLIRS D+KSAAALM+DMEAKHIG DS+TYH
Sbjct: 301 DKTKARQLFDEIPLRNLCPDIGAYNALISSLIRSGDVKSAAALMEDMEAKHIGHDSVTYH 360

Query: 361 MMFLGFMRFEDVGSVLNLYRKMMGRNFVPKTRTVVMLMKFLCENRRVDLGLEMWGYLVEK 420
           MMFLG +R EDVG    LY KM+ +NFVPKTRT V +MKF CENRRVDL L  W YLVEK
Sbjct: 361 MMFLGLIRLEDVGGFRELYSKMVRQNFVPKTRTTVTIMKFFCENRRVDLALGFWAYLVEK 420

Query: 421 GYCPHSHVLDLLVTGLCARGMVFEAFECSKQMLERGRRMSDIAFRIMERSLMLMHGTNKL 480
           GYCPHSHVLDLLVTGLCARGMV +AFECSKQMLERGR+MS+ AF IMERSL+    T+K 
Sbjct: 421 GYCPHSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMERSLLKARATDKY 480

Query: 481 GELEQLRKKLKTVLPPPKQLSSEISLS 508
           GELEQLRKKLKTVLPPP QL SEI  S
Sbjct: 481 GELEQLRKKLKTVLPPPNQLLSEIPAS 506

[Close]

BLAST of Sed0027709 vs. ExPASy TrEMBL
Match: A0A1S4DS46 (pentatricopeptide repeat-containing protein At3g61360 OS=Cucumis melo OX=3656 GN=LOC103504627 PE=4 SV=1)

HSP 1 Score: 796.2 bits (2055), Expect = 8.0e-227
Identity = 398/507 (78.50%), Postives = 437/507 (86.19%), Query Frame = 0


Query: 1   MAIRKKLTQIPQTPNSSNSFIFLAAPFSTHQSTEPTNEIHRIAKIINDHPFPDQPLRPIL 60
           MAI  KLTQIPQ P SS+SF+  AA + TH   + T EI RIAKIINDHPFPDQPL P L
Sbjct: 5   MAILMKLTQIPQKPISSHSFLIYAASYCTHLH-KSTTEIERIAKIINDHPFPDQPLHPTL 64

Query: 61  RHQIPSPLPSATFLAGVLNRLFAAHSNGLKALELFRFCLHHSRSPPSPGAFEKTLHILAR 120
            H IPSPLPS TFL  VL  LFAAHSNGLKALE F+FCLHHS++ P+P AFEKTLHILAR
Sbjct: 65  LHLIPSPLPSNTFLNDVLGHLFAAHSNGLKALEFFKFCLHHSQASPTPDAFEKTLHILAR 124

Query: 121 MRCFDHSWELLREIRETHPGLLTLKSMSILLSKIAKFQSYEETLEAFWRLENEVFVERRF 180
           MR FD SWEL+REIR+THP LLTLKSMSILLS+IAKF+S+EET+EAF R+ENEVFV R+F
Sbjct: 125 MRYFDQSWELMREIRQTHPFLLTLKSMSILLSRIAKFRSFEETIEAFQRMENEVFVGRKF 184

Query: 181 GTEEFNVLIRAFCTQRQMKEARSVFHRMYSRFPPNCKTMNLLLLGFKESSDVTAVELFYH 240
           GTEEFNVL+RAFCTQRQMKEARSVFH+MYSRFPPN KT+NLLLLGFKESSD+T+VELFYH
Sbjct: 185 GTEEFNVLLRAFCTQRQMKEARSVFHKMYSRFPPNIKTINLLLLGFKESSDITSVELFYH 244

Query: 241 EMIKRGFKPNAVTYSIRIDAYCKTGCFRDGFRVFEEMERSNFEPTMEIITTLIHGAGVVK 300
           EMIKRGFKPNAVTYSIRIDAYCK GCF DG RVF+EMER+  EPT+E ITTLIHGAG+VK
Sbjct: 245 EMIKRGFKPNAVTYSIRIDAYCKKGCFVDGLRVFKEMERAKLEPTLETITTLIHGAGIVK 304

Query: 301 DVTKARQLFDEITVRNFCPDIGAYNALMSSLIRSDDLKSAAALMQDMEAKHIGLDSMTYH 360
           D TKARQLFDEI +RN CPDIGAYNAL+SSLIRS D+KSAAALM+DMEAKHIG DS+TYH
Sbjct: 305 DKTKARQLFDEIPLRNLCPDIGAYNALISSLIRSGDVKSAAALMEDMEAKHIGHDSVTYH 364

Query: 361 MMFLGFMRFEDVGSVLNLYRKMMGRNFVPKTRTVVMLMKFLCENRRVDLGLEMWGYLVEK 420
           MMFLG +R EDVG    LY KM+ +NFVPKTRT V +MKF CENRRVDL L  W YLVEK
Sbjct: 365 MMFLGLIRLEDVGGFRELYSKMVRQNFVPKTRTTVTIMKFFCENRRVDLALGFWAYLVEK 424

Query: 421 GYCPHSHVLDLLVTGLCARGMVFEAFECSKQMLERGRRMSDIAFRIMERSLMLMHGTNKL 480
           GYCPHSHVLDLLVTGLCARGMV +AFECSKQMLERGR+MS+ AF IMERSL+    T+K 
Sbjct: 425 GYCPHSHVLDLLVTGLCARGMVLQAFECSKQMLERGRQMSEAAFLIMERSLLKARATDKY 484

Query: 481 GELEQLRKKLKTVLPPPKQLSSEISLS 508
           GELEQLRKKLKTVLPPP QL SEI  S
Sbjct: 485 GELEQLRKKLKTVLPPPNQLLSEIPAS 510

[Close]

BLAST of Sed0027709 vs. ExPASy TrEMBL
Match: A0A6J1I332 (pentatricopeptide repeat-containing protein At3g61360 OS=Cucurbita maxima OX=3661 GN=LOC111469147 PE=4 SV=1)

HSP 1 Score: 788.5 bits (2035), Expect = 1.7e-224
Identity = 395/509 (77.60%), Postives = 435/509 (85.46%), Query Frame = 0


Query: 1   MAIRKKLTQIPQTPNSSNSFIFLAAPFST--HQSTEPTNEIHRIAKIINDHPFPDQPLRP 60
           M I  +LTQI Q P     F+  AAPFST  HQS+EP  EI RI KIIN HPFPDQPLRP
Sbjct: 1   MVIPTRLTQIAQIPIFFRYFLIPAAPFSTHLHQSSEPGGEIERITKIINGHPFPDQPLRP 60

Query: 61  ILRHQIPSPLPSATFLAGVLNRLFAAHSNGLKALELFRFCLHHSRSPPSPGAFEKTLHIL 120
            L H IPSPLPS TFL  VL RLFAAHSNGLKALE F+FCLHHS++ P+P AFEKTLHIL
Sbjct: 61  TLLHHIPSPLPSNTFLNDVLGRLFAAHSNGLKALEFFKFCLHHSQASPTPDAFEKTLHIL 120

Query: 121 ARMRCFDHSWELLREIRETHPGLLTLKSMSILLSKIAKFQSYEETLEAFWRLENEVFVER 180
           ARMR FD SWEL+REI+ THP LLTLKSMSILL+KIAKFQS+EET+EAF R+ENEVFV R
Sbjct: 121 ARMRYFDQSWELMREIQRTHPFLLTLKSMSILLTKIAKFQSFEETIEAFRRMENEVFVGR 180

Query: 181 RFGTEEFNVLIRAFCTQRQMKEARSVFHRMYSRFPPNCKTMNLLLLGFKESSDVTAVELF 240
           +FGTEEFNVL+RAFCTQRQMKEARSVF +MYSRFPPN KTMNLLLLGFKESS+VTAVELF
Sbjct: 181 KFGTEEFNVLLRAFCTQRQMKEARSVFLKMYSRFPPNTKTMNLLLLGFKESSNVTAVELF 240

Query: 241 YHEMIKRGFKPNAVTYSIRIDAYCKTGCFRDGFRVFEEMERSNFEPTMEIITTLIHGAGV 300
           YHEMI+RGFKP+ VTYSIR+DAYCK GCF DG RVFEEM+R+ FEPT+E ITTLIHGAGV
Sbjct: 241 YHEMIRRGFKPDVVTYSIRMDAYCKRGCFVDGLRVFEEMKRAKFEPTLETITTLIHGAGV 300

Query: 301 VKDVTKARQLFDEITVRNFCPDIGAYNALMSSLIRSDDLKSAAALMQDMEAKHIGLDSMT 360
            KD+ KARQLFDE+ +R  CPDIGAYNAL+SSLIRSDD+ SAAALM+DMEAKHIG DSMT
Sbjct: 301 AKDIAKARQLFDEMPLRKLCPDIGAYNALISSLIRSDDVNSAAALMEDMEAKHIGHDSMT 360

Query: 361 YHMMFLGFMRFEDVGSVLNLYRKMMGRNFVPKTRTVVMLMKFLCENRRVDLGLEMWGYLV 420
           YHMMF+G M+ EDV     LY KM+ RNFVPK RTVVM+M+F CENRRVDLGL++WGYLV
Sbjct: 361 YHMMFVGLMKLEDVHGFYELYSKMIRRNFVPKARTVVMIMRFFCENRRVDLGLDLWGYLV 420

Query: 421 EKGYCPHSHVLDLLVTGLCARGMVFEAFECSKQMLERGRRMSDIAFRIMERSLMLMHGTN 480
           EKGYCPHSHVLD+LVTGLCARGMV EAFECSKQMLERGR+MSD AF IMERSL+     +
Sbjct: 421 EKGYCPHSHVLDVLVTGLCARGMVHEAFECSKQMLERGRQMSDAAFLIMERSLLQADAKD 480

Query: 481 KLGELEQLRKKLKTVLPPPKQLSSEISLS 508
            LGELEQLRKKLKTVLPPPKQL  EI  S
Sbjct: 481 ILGELEQLRKKLKTVLPPPKQLPYEIPAS 509

[Close]

BLAST of Sed0027709 vs. TAIR 10
Match: AT3G61360.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 540.4 bits (1391), Expect = 1.5e-153
Identity = 274/490 (55.92%), Postives = 361/490 (73.67%), Query Frame = 0


Query: 16  SSNSFIFLAAP-FSTHQSTEPTN----EIHRIAKIINDHPFPDQPLRPILRHQIPSPLPS 75
           SS+S+  L AP  S+  S   T+    EI RI  IIN HPFP+ P++PIL   IP    S
Sbjct: 6   SSDSYRRLLAPVLSSSSSLSSTSINRTEIERITIIINGHPFPNHPIQPILAKHIPLSSLS 65

Query: 76  ATFLAGVLNRLFAAHSNGLKALELFRFCLHHSRSPPSPGAFEKTLHILARMRCFDHSWEL 135
             F++ VL RLFAAHSNGLKALE F++ L  S+S P+  +FEKTLHILARMR FD +W L
Sbjct: 66  PEFVSEVLGRLFAAHSNGLKALEFFKYSLKSSKSSPTSDSFEKTLHILARMRYFDQAWAL 125

Query: 136 LREIRETHPGLLTLKSMSILLSKIAKFQSYEETLEAFWRLENEVFVERRFGTEEFNVLIR 195
           + E+R+ +P LL+ KSMSILL KIAKF SYEETLEAF ++E E+F  ++FG +EFN+L+R
Sbjct: 126 MAEVRKDYPNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIF-RKKFGVDEFNILLR 185

Query: 196 AFCTQRQMKEARSVFHRMYSRFPPNCKTMNLLLLGFKESSDVTAVELFYHEMIKRGFKPN 255
           AFCT+R+MKEARS+F +++SRF P+ KTMN+LLLGFKE+ DVTA ELFYHEM+KRGFKPN
Sbjct: 186 AFCTEREMKEARSIFEKLHSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPN 245

Query: 256 AVTYSIRIDAYCKTGCFRDGFRVFEEMERSNFEPTMEIITTLIHGAGVVKDVTKARQLFD 315
           +VTY IRID +CK   F +  R+FE+M+R +F+ T++I+TTLIHG+GV ++  KARQLFD
Sbjct: 246 SVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFD 305

Query: 316 EITVRNFCPDIGAYNALMSSLIRSDDLKSAAALMQDMEAKHIGLDSMTYHMMFLGFMRFE 375
           EI+ R   PD GAYNALMSSL++  D+  A  +M++ME K I  DS+T+H MF+G M+ +
Sbjct: 306 EISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSK 365

Query: 376 DVG--SVLNLYRKMMGRNFVPKTRTVVMLMKFLCENRRVDLGLEMWGYLVEKGYCPHSHV 435
           + G   V   Y+KM  R+ VPKT T+VMLMK  C N  V+LGL++W Y++EKGYCPH H 
Sbjct: 366 EFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHA 425

Query: 436 LDLLVTGLCARGMVFEAFECSKQMLERGRRMSDIAFRIMERSLMLMHGTNKLGELEQLRK 495
           L+LL T LCAR    +AFECS Q +ERGR +S+  +R++E SL   +   KL EL++  +
Sbjct: 426 LELLTTALCARRRANDAFECSWQTVERGRCVSEPVYRMLETSLSSNNELKKLEELKEEIQ 485

Query: 496 KLKTVLPPPK 499
           KL + LPPP+
Sbjct: 486 KLHSFLPPPE 494

[Close]

BLAST of Sed0027709 vs. TAIR 10
Match: AT1G02420.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 236.5 bits (602), Expect = 4.7e-62
Identity = 133/414 (32.13%), Postives = 226/414 (54.59%), Query Frame = 0


Query: 77  VLNRLFAAHSNGLKALELFRFCLHHSRSPPSPGAFEKTLHILARMRCFDHSWELLREIRE 136
           VL R+  +H N ++ LE +R+         S  + +  L+IL R R FD  WELL E + 
Sbjct: 77  VLKRVRFSHGNPIQTLEFYRYASAIRGFYHSSFSLDTMLYILGRNRKFDQIWELLIETKR 136

Query: 137 THPGLLTLKSMSILLSKIAKFQSYEETLEAFWRLENEVFVERRFGTEEFNVLIRAFCTQR 196
               L++ ++M ++L ++AK  S  +T+E+FW+ +    V   F T  FN L+R  C ++
Sbjct: 137 KDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKR--LVPDFFDTACFNALLRTLCQEK 196

Query: 197 QMKEARSVFHRMYSRFPPNCKTMNLLLLGFKESSDVTAVELFYHEMIKRGFKPNAVTYSI 256
            M +AR+V+H +  +F P+ +T N+LL G+K S +    E F+ EM  +G KP+ VTY+ 
Sbjct: 197 SMTDARNVYHSLKHQFQPDLQTFNILLSGWKSSEE---AEAFFEEMKGKGLKPDVVTYNS 256

Query: 257 RIDAYCKTGCFRDGFRVFEEMERSNFEPTMEIITTLIHGAGVVKDVTKARQLFDEITVRN 316
            ID YCK       +++ ++M      P +   TT+I G G++    KAR++  E+    
Sbjct: 257 LIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYG 316

Query: 317 FCPDIGAYNALMSSLIRSDDLKSAAALMQDMEAKHIGLDSMTYHMMFLGFMRFEDVGSVL 376
             PD+ AYNA + +   +  L  A  L+ +M  K +  ++ TY++ F       D+G   
Sbjct: 317 CYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSW 376

Query: 377 NLYRKMMGRNFVPKTRTVVMLMKFLCENRRVDLGLEMWGYLVEKGYCPHSHVLDLLVTGL 436
            LY +M+G   +P T++ + L+K    + +VD+ + +W  +V KG+  +S V D+L+  L
Sbjct: 377 ELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLVSDVLLDLL 436

Query: 437 CARGMVFEAFECSKQMLERGRRMSDIAFRIMERSLMLMHGTNKLGELEQLRKKL 491
           C    V EA +C  +M+E+G R S+++F+   R  +LM   NK  E+  L +K+
Sbjct: 437 CDLAKVEEAEKCLLEMVEKGHRPSNVSFK---RIKLLMELANKHDEVNNLIQKM 482

[Close]

BLAST of Sed0027709 vs. TAIR 10
Match: AT1G71060.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 163.7 bits (413), Expect = 3.9e-40
Identity = 123/491 (25.05%), Postives = 235/491 (47.86%), Query Frame = 0


Query: 7   LTQIPQTPNSSNSFI---FLAAPFSTHQS-TEPTNEIHRIAKIINDHPFPDQPLRPILRH 66
           L  IP    +SN  +   F A+   T  S  + + +  RI KI+    F D  +  +L  
Sbjct: 30  LESIPWIHKASNFTLYGSFHASSVETQVSANDASQDAERICKILT--KFTDSKVETLLNE 89

Query: 67  QIPSPLPSATFLAGVLNRLFAAHSNGLKALELFRFCLHHSRSPPSPGAFEKTLHILARMR 126
              S   S   +  VL +L  A   G+ AL +F++  +      +   +   +  L +++
Sbjct: 90  --ASVKLSPALIEEVLKKLSNA---GVLALSVFKWAENQKGFKHTTSNYNALIESLGKIK 149

Query: 127 CFDHSWELLREIRETHPGLLTLKSMSILLSKIAKFQSYEETLEAFWRLENEVFVERRFGT 186
            F   W L+ +++     LL+ ++ +++  + A+ +  +E + AF ++E   F   +  +
Sbjct: 150 QFKLIWSLVDDMKAKK--LLSKETFALISRRYARARKVKEAIGAFHKMEEFGF---KMES 209

Query: 187 EEFNVLIRAFCTQRQMKEARSVFHRM-YSRFPPNCKTMNLLLLGFKESSDVTAVELFYHE 246
            +FN ++      R + +A+ VF +M   RF P+ K+  +LL G+ +  ++  V+    E
Sbjct: 210 SDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNRE 269

Query: 247 MIKRGFKPNAVTYSIRIDAYCKTGCFRDGFRVFEEMERSNFEPTMEIITTLIHGAGVVKD 306
           M   GF+P+ V Y I I+A+CK   + +  R F EME+ N +P+  I  +LI+G G  K 
Sbjct: 270 MKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKK 329

Query: 307 VTKARQLFDEITVRNFCPDIGAYNALMSSLIRSDDLKSAAALMQDMEAKHIGLDSMTYHM 366
           +  A + F+      F  +   YNAL+ +   S  ++ A   + +M  K +G ++ TY +
Sbjct: 330 LNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDI 389

Query: 367 MFLGFMRFEDVGSVLNLYRKMMGRNFVPKTRTVVMLMKFLCENRRVDLGLEMWGYLVEKG 426
           +    +R +       +Y+ M   +  P   T  ++++  C   R+D+ +++W  +  KG
Sbjct: 390 ILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKG 449

Query: 427 YCPHSHVLDLLVTGLCARGMVFEAFECSKQMLERGRRMSDIAFRIMERSLMLMHGTNKLG 486
             P  H+   L+T LC    + EA E   +ML+ G R     F  ++++L+     +K+ 
Sbjct: 450 VLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVT 505

Query: 487 EL----EQLRK 489
           +L    ++LRK
Sbjct: 510 DLVVKMDRLRK 505

[Close]

BLAST of Sed0027709 vs. TAIR 10
Match: AT1G77360.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 161.8 bits (408), Expect = 1.5e-39
Identity = 99/396 (25.00%), Postives = 195/396 (49.24%), Query Frame = 0


Query: 77  VLNRLFAAHSNGLKALELFRFCLHHSRSPPSPGAFEKTLHILARMRCFDHSWELLREIRE 136
           VLNR     + GL     F++         S  A+   +   A++R +   W+L+  +R+
Sbjct: 106 VLNRF---RNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRK 165

Query: 137 THPGLLTLKSMSILLSKIAKFQSYEETLEAFWRLENEVFVERRFGTEEFNVLIRAFCTQR 196
               +L +++  I++ K A+ Q  +E + AF  +E     +       FN L+ A C  +
Sbjct: 166 KK--MLNVETFCIVMRKYARAQKVDEAIYAFNVMEK---YDLPPNLVAFNGLLSALCKSK 225

Query: 197 QMKEARSVFHRMYSRFPPNCKTMNLLLLGFKESSDVTAVELFYHEMIKRGFKPNAVTYSI 256
            +++A+ VF  M  RF P+ KT ++LL G+ +  ++      + EMI  G  P+ VTYSI
Sbjct: 226 NVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSI 285

Query: 257 RIDAYCKTGCFRDGFRVFEEMERSNFEPTMEIITTLIHGAGVVKDVTKARQLFDEITVRN 316
            +D  CK G   +   +   M+ S  +PT  I + L+H  G    + +A   F E+    
Sbjct: 286 MVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSG 345

Query: 317 FCPDIGAYNALMSSLIRSDDLKSAAALMQDMEAKHIGLDSMTYHMMFLGFMRFEDVGSVL 376
              D+  +N+L+ +  +++ +K+   ++++M++K +  +S + +++    +   +     
Sbjct: 346 MKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAF 405

Query: 377 NLYRKMMGRNFVPKTRTVVMLMKFLCENRRVDLGLEMWGYLVEKGYCPHSHVLDLLVTGL 436
           +++RKM+ +   P   T  M++K  CE + ++   ++W Y+ +KG  P  H   +L+ GL
Sbjct: 406 DVFRKMI-KVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGL 465

Query: 437 CARGMVFEAFECSKQMLERGRRMSDIAFRIMERSLM 473
           C      +A    ++M+E G R S + F  + + L+
Sbjct: 466 CEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLI 492

[Close]

BLAST of Sed0027709 vs. TAIR 10
Match: AT3G22670.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 141.4 bits (355), Expect = 2.1e-33
Identity = 90/350 (25.71%), Postives = 164/350 (46.86%), Query Frame = 0


Query: 111 FEKTLHILARMRCFDHSWELLREIRETHPG-LLTLKSMSILLSKIAKFQSYEETLEAFWR 170
           +   + +L + R FD  WEL+ E+ +     L+TL +MS ++ ++AK   Y + ++AF  
Sbjct: 169 YNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLE 228

Query: 171 LENEVFVERRFGTEEFNVLIRAFCTQRQMKEARSVFHRMYSRFPPNCKTMNLLLLGFKES 230
           +E    V  +  T   N L+ A   +  ++ A  VF +++    P+ +T N+L+ GF ++
Sbjct: 229 MEKSYGV--KTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGFCKA 288

Query: 231 SDVTAVELFYHEMIKRGFKPNAVTYSIRIDAYCKTGCFRDGFRVFEEMERSNFEPTMEII 290
                       M    F P+ VTY+  ++AYCK G FR    + EEM  +   P +   
Sbjct: 289 RKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTY 348

Query: 291 TTLIHGAGVVKDVTKARQLFDEITVRNFCPDIGAYNALMSSLIRSDDLKSAAALMQDMEA 350
           T ++H  G  K V +A  +++++      PD   Y++L+  L ++   K AA + +DM  
Sbjct: 349 TIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTN 408

Query: 351 KHIGLDSMTYHMMFLGFMRFEDVGSVLNLYRKM---MGRNFVPKTRTVVMLMKFLCENRR 410
           + +  D + Y+ M    +        L L ++M    G +  P   T   L+K  C  ++
Sbjct: 409 QGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKK 468

Query: 411 VDLGLEMWGYLVEKGYCPHSHVLDLLVTGLCARGMVFEAFECSKQMLERG 457
           + L   +  ++V+           LL+ GLC  G V EA    ++ + +G
Sbjct: 469 MKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKG 516

The following BLAST results are available for this feature:

BLAST of Sed0027709 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876095.1	6.1e-229	78.67	pentatricopeptide repeat-containing protein At3g61360 [Benincasa hispida] >XP_03...	[more]
XP_022929103.1	1.5e-227	78.78	pentatricopeptide repeat-containing protein At3g61360 [Cucurbita moschata] >XP_0...	[more]
KAA0055168.1	9.7e-227	78.50	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
KAG6579688.1	1.3e-226	78.59	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
KAG7017131.1	1.3e-226	78.39	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]

BLAST of Sed0027709 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M2C8	2.1e-152	55.92	Pentatricopeptide repeat-containing protein At3g61360 OS=Arabidopsis thaliana OX...	[more]
Q9FZ19	6.6e-61	32.13	Putative pentatricopeptide repeat-containing protein At1g02420 OS=Arabidopsis th...	[more]
Q9C9A2	5.5e-39	25.05	Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidop...	[more]
Q9FVX2	2.1e-38	25.00	Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidop...	[more]
Q9LUJ4	2.9e-32	25.71	Pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Arabidop...	[more]

BLAST of Sed0027709 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EM60	7.3e-228	78.78	pentatricopeptide repeat-containing protein At3g61360 OS=Cucurbita moschata OX=3...	[more]
A0A5A7UJI2	4.7e-227	78.50	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A5D3BMK0	8.0e-227	78.50	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S4DS46	8.0e-227	78.50	pentatricopeptide repeat-containing protein At3g61360 OS=Cucumis melo OX=3656 GN...	[more]
A0A6J1I332	1.7e-224	77.60	pentatricopeptide repeat-containing protein At3g61360 OS=Cucurbita maxima OX=366...	[more]

BLAST of Sed0027709 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G61360.1	1.5e-153	55.92	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G02420.1	4.7e-62	32.13	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G71060.1	3.9e-40	25.05	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G77360.1	1.5e-39	25.00	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G22670.1	2.1e-33	25.71	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 319..367 e-value: 4.2E-7 score: 30.1 coord: 214..263 e-value: 1.2E-9 score: 38.2
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 185..211 e-value: 2.6E-5 score: 22.1 coord: 289..321 e-value: 5.2E-4 score: 18.0 coord: 323..355 e-value: 0.0024 score: 15.9 coord: 252..285 e-value: 2.2E-9 score: 34.9
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 185..209 e-value: 6.3E-4 score: 19.8 coord: 432..456 e-value: 0.73 score: 10.2
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 181..211 score: 8.670445
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 320..354 score: 8.79102
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 355..389 score: 9.097937
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 250..284 score: 12.868624
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 215..249 score: 8.999285
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 242..368 e-value: 3.0E-29 score: 104.4
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 396..487 e-value: 1.6E-8 score: 36.1
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 54..241 e-value: 1.4E-11 score: 46.2
None	No IPR available	PANTHER	PTHR45613	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 13..495
None	No IPR available	PANTHER	PTHR45613:SF143	OS06G0694600 PROTEIN	coord: 13..495

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0027709.1	Sed0027709.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005515	protein binding