Sed0027704 (gene) Chayote v1

Overview


Name	Sed0027704
Type	gene
Organism	Sechium edule (Chayote v1)
Description	C-8 sterol isomerase
Location	LG12: 5832693 .. 5833976 (-)
RNA-Seq Expression	Sed0027704
Synteny	Sed0027704

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAAAGATCCTTTCAACCTCTACTTCTTCAAACTCAACCAACACTGCCACCACCGCCACCGCCACCGCCTCCATGGAAGAAGATGAGCTTAGCTGCTACTACCCCGGTTGCCGGAAAGATGCAAATTGCAACTGCAAGATTTGCTTGGACAGTATCAACGCCATTTTGGATCTAATGCCTTACAGTGTCCAAAAAAGCTCCCTTACAAAGCTCTCTGCTTCCGGATCTAATGTCGAAACCACTCCGATTGTGTTTAACCCTTCGATTTTTACGACACCCACATCGGGAACGTCGAGGATCCTGAAGTGCCCTAATTTTAAATCGCCGGTGAAATTGAGTTCGAGTTTCAAGGCTGAGGAAGAGGAAAGAGATTCGAGTTCGTTGTGTCGGTTTGTGACTTTGGTTTTCGTTCTGAGTTTGATCTTTTCTGTGATTGCTGGGTTTTCGTGTGCGATCGCTAGGGTTACTCGACCGAAGCTGTCTGCGGAAATTGTTAGAACTGCGGGTAAGAATTCTCAGTTCGTGCAAGATTTGAATGGGAAATTGAGGGTTTTGCAGAGGGAGTTGCAGGGAATGGTGAGTGAGGAGATTTCGAATTGCAGTTACTCGAATTCCATGTGGGAAATTGATCAGGTAGATTCAGAAACCTTCTGGTTTTGGGGTATTTTTTCAGTTATGTTCTTAAACATTCTGATGGATGGTCTTAGAGTTTTAAATTTTGCTTCAACTGCAGGAGGGAATGCTCTTAAGTTCAAGGTGTACAATGTACAAGTCAGCCACTGAGGCAGTGAGTATATGGGGATGGCCTCTACAGACTGCAGGACTGCTCCGAACCGGATTTTCGCATCGATCATTCACAATCCTATCAGGCAGAGTTACAGAGGTAAAGTCAAAATGTTCCGAGTTGAATTGAAATAATGACCAAAATTTGATCAATAGACAGAAAACTTGATGATGTTCGATTGAATGTTTTGGTCTTTCTGTTTCTTACAGTGGTCTGATGGAGGGATCGGTTTCGTGGTTCGAGAGACAAACGACTCTTGGGTGCAGAAAAGATGGGGTGCCTCAGCTGTGCAATTAGATCCACATACATGGGTTCTCGAGTATCGACAAAGCTCCTTGTTTGAGAACTCGAGCTTGAATGTGATGGCTGCAAATTTCTTCAAACACTGGATGTCAAAAGTCATAAGAAGATTGAAGAACGAGTTTTGGCTGTTTTTGGATGTTGAAACCAAGTTTCATCAGACTAGAGCTACACGTGATTTTAAGACTCCAACATGA

mRNA sequence

ATGAAAAAGATCCTTTCAACCTCTACTTCTTCAAACTCAACCAACACTGCCACCACCGCCACCGCCACCGCCTCCATGGAAGAAGATGAGCTTAGCTGCTACTACCCCGGTTGCCGGAAAGATGCAAATTGCAACTGCAAGATTTGCTTGGACAGTATCAACGCCATTTTGGATCTAATGCCTTACAGTGTCCAAAAAAGCTCCCTTACAAAGCTCTCTGCTTCCGGATCTAATGTCGAAACCACTCCGATTGTGTTTAACCCTTCGATTTTTACGACACCCACATCGGGAACGTCGAGGATCCTGAAGTGCCCTAATTTTAAATCGCCGGTGAAATTGAGTTCGAGTTTCAAGGCTGAGGAAGAGGAAAGAGATTCGAGTTCGTTGTGTCGGTTTGTGACTTTGGTTTTCGTTCTGAGTTTGATCTTTTCTGTGATTGCTGGGTTTTCGTGTGCGATCGCTAGGGTTACTCGACCGAAGCTGTCTGCGGAAATTGTTAGAACTGCGGGTAAGAATTCTCAGTTCGTGCAAGATTTGAATGGGAAATTGAGGGTTTTGCAGAGGGAGTTGCAGGGAATGGTGAGTGAGGAGATTTCGAATTGCAGTTACTCGAATTCCATGTGGGAAATTGATCAGGAGGGAATGCTCTTAAGTTCAAGGTGTACAATGTACAAGTCAGCCACTGAGGCAGTGAGTATATGGGGATGGCCTCTACAGACTGCAGGACTGCTCCGAACCGGATTTTCGCATCGATCATTCACAATCCTATCAGGCAGAGTTACAGAGTGGTCTGATGGAGGGATCGGTTTCGTGGTTCGAGAGACAAACGACTCTTGGGTGCAGAAAAGATGGGGTGCCTCAGCTGTGCAATTAGATCCACATACATGGGTTCTCGAGTATCGACAAAGCTCCTTGTTTGAGAACTCGAGCTTGAATGTGATGGCTGCAAATTTCTTCAAACACTGGATGTCAAAAGTCATAAGAAGATTGAAGAACGAGTTTTGGCTGTTTTTGGATGTTGAAACCAAGTTTCATCAGACTAGAGCTACACGTGATTTTAAGACTCCAACATGA

Coding sequence (CDS)

ATGAAAAAGATCCTTTCAACCTCTACTTCTTCAAACTCAACCAACACTGCCACCACCGCCACCGCCACCGCCTCCATGGAAGAAGATGAGCTTAGCTGCTACTACCCCGGTTGCCGGAAAGATGCAAATTGCAACTGCAAGATTTGCTTGGACAGTATCAACGCCATTTTGGATCTAATGCCTTACAGTGTCCAAAAAAGCTCCCTTACAAAGCTCTCTGCTTCCGGATCTAATGTCGAAACCACTCCGATTGTGTTTAACCCTTCGATTTTTACGACACCCACATCGGGAACGTCGAGGATCCTGAAGTGCCCTAATTTTAAATCGCCGGTGAAATTGAGTTCGAGTTTCAAGGCTGAGGAAGAGGAAAGAGATTCGAGTTCGTTGTGTCGGTTTGTGACTTTGGTTTTCGTTCTGAGTTTGATCTTTTCTGTGATTGCTGGGTTTTCGTGTGCGATCGCTAGGGTTACTCGACCGAAGCTGTCTGCGGAAATTGTTAGAACTGCGGGTAAGAATTCTCAGTTCGTGCAAGATTTGAATGGGAAATTGAGGGTTTTGCAGAGGGAGTTGCAGGGAATGGTGAGTGAGGAGATTTCGAATTGCAGTTACTCGAATTCCATGTGGGAAATTGATCAGGAGGGAATGCTCTTAAGTTCAAGGTGTACAATGTACAAGTCAGCCACTGAGGCAGTGAGTATATGGGGATGGCCTCTACAGACTGCAGGACTGCTCCGAACCGGATTTTCGCATCGATCATTCACAATCCTATCAGGCAGAGTTACAGAGTGGTCTGATGGAGGGATCGGTTTCGTGGTTCGAGAGACAAACGACTCTTGGGTGCAGAAAAGATGGGGTGCCTCAGCTGTGCAATTAGATCCACATACATGGGTTCTCGAGTATCGACAAAGCTCCTTGTTTGAGAACTCGAGCTTGAATGTGATGGCTGCAAATTTCTTCAAACACTGGATGTCAAAAGTCATAAGAAGATTGAAGAACGAGTTTTGGCTGTTTTTGGATGTTGAAACCAAGTTTCATCAGACTAGAGCTACACGTGATTTTAAGACTCCAACATGA

Protein sequence

MKKILSTSTSSNSTNTATTATATASMEEDELSCYYPGCRKDANCNCKICLDSINAILDLMPYSVQKSSLTKLSASGSNVETTPIVFNPSIFTTPTSGTSRILKCPNFKSPVKLSSSFKAEEEERDSSSLCRFVTLVFVLSLIFSVIAGFSCAIARVTRPKLSAEIVRTAGKNSQFVQDLNGKLRVLQRELQGMVSEEISNCSYSNSMWEIDQEGMLLSSRCTMYKSATEAVSIWGWPLQTAGLLRTGFSHRSFTILSGRVTEWSDGGIGFVVRETNDSWVQKRWGASAVQLDPHTWVLEYRQSSLFENSSLNVMAANFFKHWMSKVIRRLKNEFWLFLDVETKFHQTRATRDFKTPT

Homology

[Close]

BLAST of Sed0027704 vs. NCBI nr
Match: XP_038902337.1 (uncharacterized protein LOC120088951 [Benincasa hispida])

HSP 1 Score: 584.7 bits (1506), Expect = 5.3e-163
Identity = 303/357 (84.87%), Postives = 312/357 (87.39%), Query Frame = 0


Query: 1   MKKILSTSTSSNSTNTATTATATASMEEDELSCYYPGCRKDANCNCKICLDSINAILDLM 60
           MK  LSTS SSNST T   A       E   SCYYPGCRKDANC+CKICLDSINA LDLM
Sbjct: 1   MKPDLSTSASSNSTTTTAAAIEEDERSEARDSCYYPGCRKDANCDCKICLDSINATLDLM 60

Query: 61  PYSVQKSSLTKLSASGSNVETTPIVFNPSIFTTPTSGTSRILKCPNFKSPVKLSSSFKAE 120
           PYSVQKSSLTKLSAS   VETTPI FNPSI TTPT+ TSRILK P F+SPVKLSS FKAE
Sbjct: 61  PYSVQKSSLTKLSASRPKVETTPISFNPSILTTPTTVTSRILKYPKFESPVKLSSKFKAE 120

Query: 121 EEERDSSSLCRFVTLVFVLSLIFSVIAGFSCAIARVTRPKLSAEIVRTAGKNSQFVQDLN 180
           E ERDSSSL RFVTLVFVLSLI  V  GFSCAIARV RPKLSAEIVRTA KNSQFVQDLN
Sbjct: 121 EGERDSSSLRRFVTLVFVLSLILVVTTGFSCAIARVIRPKLSAEIVRTASKNSQFVQDLN 180

Query: 181 GKLRVLQRELQGMVSEEISNCSYSNSMWEIDQEGMLLSSRCTMYKSATEAVSIWGWPLQT 240
           GKLRVLQRELQGMV+ EISNCSYSNS WEIDQEGMLL+S+CTMYKS TEAVSIWGWPLQT
Sbjct: 181 GKLRVLQRELQGMVNGEISNCSYSNSYWEIDQEGMLLNSKCTMYKSVTEAVSIWGWPLQT 240

Query: 241 AGLLRTGFSHRSFTILSGRVTEWSDGGIGFVVRETNDSWVQKRWGASAVQLDPHTWVLEY 300
           AGLLRTGFSHRSFTILSGRVTEWSDGGIG++VRE N SWVQKRWGASAVQLDPHTWVLEY
Sbjct: 241 AGLLRTGFSHRSFTILSGRVTEWSDGGIGYLVREANTSWVQKRWGASAVQLDPHTWVLEY 300

Query: 301 RQSSLFENSSLNVMAANFFKHWMSKVIRRLKNEFWLFLDVETKFHQTRATRDFKTPT 358
           RQSSL ENSSLNVMAA+FFKHWMSKVIRRLKNE WLFLD ETKFHQ  ATRDFKTPT
Sbjct: 301 RQSSLLENSSLNVMAADFFKHWMSKVIRRLKNELWLFLDGETKFHQITATRDFKTPT 357

[Close]

BLAST of Sed0027704 vs. NCBI nr
Match: XP_004134442.1 (uncharacterized protein LOC101220408 [Cucumis sativus] >KGN56971.1 hypothetical protein Csa_011188 [Cucumis sativus])

HSP 1 Score: 567.0 bits (1460), Expect = 1.1e-157
Identity = 295/362 (81.49%), Postives = 313/362 (86.46%), Query Frame = 0


Query: 1   MKKILSTSTSSNSTNTATTATATASMEEDEL-----SCYYPGCRKDANCNCKICLDSINA 60
           MK +LSTS SSNST      T TA++E+DE      SCYYPGCRKDANC+CKICL+SINA
Sbjct: 1   MKTVLSTSVSSNST------TTTAAVEDDERSEARDSCYYPGCRKDANCDCKICLESINA 60

Query: 61  ILDLMPYSVQKSSLTKLSASGSNVETTPIVFNPSIFTTPTSGTSRILKCPNFKSPVKLSS 120
            LDLMPYSVQKSSLTKLSAS  NVETTPI FNPSI TTPT+ TSRI K P F+SPVKLSS
Sbjct: 61  TLDLMPYSVQKSSLTKLSASRPNVETTPISFNPSILTTPTTVTSRISKYPKFESPVKLSS 120

Query: 121 SFKAEEEERDSSSLCRFVTLVFVLSLIFSVIAGFSCAIARVTRPKLSAEIVRTAGKNSQF 180
            FKAEE  RDSSSL RFVTLVFVLSLI +V  GFSCAIARV RPKLSAEIVRTA KNSQF
Sbjct: 121 KFKAEEGGRDSSSLRRFVTLVFVLSLILAVTTGFSCAIARVIRPKLSAEIVRTASKNSQF 180

Query: 181 VQDLNGKLRVLQRELQGMVSEEISNCSYSNSMWEIDQEGMLLSSRCTMYKSATEAVSIWG 240
           VQ+LNGKLRVL+RELQGMV+ EISNCSYSNS WEIDQEGM+LSS+CTMYKSATE VSIWG
Sbjct: 181 VQNLNGKLRVLERELQGMVNAEISNCSYSNSYWEIDQEGMILSSKCTMYKSATETVSIWG 240

Query: 241 WPLQTAGLLRTGFSHRSFTILSGRVTEWSDGGIGFVVRETNDSWVQKRWGASAVQLDPHT 300
           WPLQTAGLLRTGFS RSFTILSGRVTEWSDGGIG++VRE N SWVQKRWGASAVQLDPHT
Sbjct: 241 WPLQTAGLLRTGFSQRSFTILSGRVTEWSDGGIGYLVREANTSWVQKRWGASAVQLDPHT 300

Query: 301 WVLEYRQSSLFENSSLNVMAANFFKHWMSKVIRRLKNEFWLFLDVETKFHQTRATRDFKT 358
           WVLEYRQSSL ENSSLN+MAA+FFKHWM  VIRRLKNE WLFLD ET FHQ   T DFKT
Sbjct: 301 WVLEYRQSSLLENSSLNMMAADFFKHWMRIVIRRLKNELWLFLDGETNFHQITVTSDFKT 356

[Close]

BLAST of Sed0027704 vs. NCBI nr
Match: XP_023527177.1 (uncharacterized protein LOC111790490 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 552.7 bits (1423), Expect = 2.2e-153
Identity = 285/364 (78.30%), Postives = 310/364 (85.16%), Query Frame = 0


Query: 1   MKKILSTSTSSNST-NTATTATATASMEEDEL-----SCYYPGCRKDANCNCKICLDSIN 60
           MK +LS+S SSNST  TA T   T + E+DE      SCYYPGCRKDANCNCKICLDSIN
Sbjct: 1   MKTVLSSSASSNSTITTAATTPVTVAGEDDERSEARDSCYYPGCRKDANCNCKICLDSIN 60

Query: 61  AILDLMPYSVQKSSLTKLSASGSNVETTPIVFNPSIFTTPTSGTSRILKCPNFKSPVKLS 120
           A LDLMPYSVQKSSLTKLSAS  N+ETTPI FNPSI TTPTSGTSRIL CP FKSPVKL+
Sbjct: 61  ATLDLMPYSVQKSSLTKLSASRPNLETTPISFNPSILTTPTSGTSRILNCPKFKSPVKLT 120

Query: 121 SSFKAEEEERDSSSLCRFVTLVFVLSLIFSVIAGFSCAIARVTRPKLSAEIVRTAGKNSQ 180
           S FKAEE E+DSS   RFVTL+F + LIF+  +GFSCAIA V RPKLSAEIVRTA K SQ
Sbjct: 121 SRFKAEEGEKDSSKFRRFVTLIFAICLIFAATSGFSCAIAAVFRPKLSAEIVRTASKKSQ 180

Query: 181 FVQDLNGKLRVLQRELQGMVSEEISNCSYSNSMWEIDQEGMLLSSRCTMYKSATEAVSIW 240
           FV+DLNGK RVLQR LQ M++ EISNCS+SNS WEIDQEGMLLSS+CTMYKSATEAVSIW
Sbjct: 181 FVEDLNGKFRVLQRVLQEMMNGEISNCSHSNSYWEIDQEGMLLSSKCTMYKSATEAVSIW 240

Query: 241 GWPLQTAGLLRTGFSHRSFTILSGRVTEWSDGGIGFVVRETNDSWVQKRWGASAVQLDPH 300
           GWPLQTAGLLRTGFS RSFTILSGRVTEWS+GGIG++VRE N SWVQ +WGASAV LDPH
Sbjct: 241 GWPLQTAGLLRTGFSQRSFTILSGRVTEWSEGGIGYLVREANTSWVQNKWGASAVHLDPH 300

Query: 301 TWVLEYRQSSLFENSSLNVMAANFFKHWMSKVIRRLKNEFWLFLDVETKFHQ-TRATRDF 358
           TWV+EYRQSSL ENSSLNVMAA+FFKHWM KV+RRLKNE W+FLDV TKFH+   AT DF
Sbjct: 301 TWVVEYRQSSLLENSSLNVMAADFFKHWMMKVMRRLKNEVWVFLDVGTKFHEIVTATSDF 360

[Close]

BLAST of Sed0027704 vs. NCBI nr
Match: XP_022980007.1 (uncharacterized protein LOC111479541 [Cucurbita maxima])

HSP 1 Score: 552.7 bits (1423), Expect = 2.2e-153
Identity = 289/367 (78.75%), Postives = 310/367 (84.47%), Query Frame = 0


Query: 1   MKKILSTSTSSNSTNTATTATATASM----EEDEL-----SCYYPGCRKDANCNCKICLD 60
           MK +LS+S SSNST T  T  AT  +    EEDE      SCYYPGCRKDANCNCKICLD
Sbjct: 1   MKTVLSSSASSNSTITTATTAATTPVTFAGEEDERSEARDSCYYPGCRKDANCNCKICLD 60

Query: 61  SINAILDLMPYSVQKSSLTKLSASGSNVETTPIVFNPSIFTTPTSGTSRILKCPNFKSPV 120
           SINA LDLMPYSVQKSSLTKLSAS  N+ETTPI FNPSI TTPTSGTSRIL  P FKSPV
Sbjct: 61  SINATLDLMPYSVQKSSLTKLSASRPNLETTPISFNPSILTTPTSGTSRILNYPKFKSPV 120

Query: 121 KLSSSFKAEEEERDSSSLCRFVTLVFVLSLIFSVIAGFSCAIARVTRPKLSAEIVRTAGK 180
           KL+S FKAEE E+DSS   RFVTL+FV+ LIF+  +GFSCAIA V RPKLSAEIVRTA K
Sbjct: 121 KLTSRFKAEEGEKDSSKFRRFVTLIFVICLIFAATSGFSCAIAAVFRPKLSAEIVRTASK 180

Query: 181 NSQFVQDLNGKLRVLQRELQGMVSEEISNCSYSNSMWEIDQEGMLLSSRCTMYKSATEAV 240
            SQFV+DLNGK RVLQR LQ MV+ EISNCS+SNS WEIDQEGMLL S+CTMYKSATEAV
Sbjct: 181 KSQFVEDLNGKFRVLQRVLQEMVNGEISNCSHSNSYWEIDQEGMLLCSKCTMYKSATEAV 240

Query: 241 SIWGWPLQTAGLLRTGFSHRSFTILSGRVTEWSDGGIGFVVRETNDSWVQKRWGASAVQL 300
           SIWGWPLQTAGLLRTGFS RSFTILSGRVTEWSDGGIG++VRE N SWVQ +WGASAV L
Sbjct: 241 SIWGWPLQTAGLLRTGFSQRSFTILSGRVTEWSDGGIGYLVREANTSWVQNKWGASAVHL 300

Query: 301 DPHTWVLEYRQSSLFENSSLNVMAANFFKHWMSKVIRRLKNEFWLFLDVETKFHQ-TRAT 358
           DP TWVLEYRQSSL ENSSLNVMAA+FFKHWM+KVIRRLKNE W+FLDV TKFH+   AT
Sbjct: 301 DPRTWVLEYRQSSLLENSSLNVMAADFFKHWMTKVIRRLKNEVWVFLDVGTKFHEIITAT 360

[Close]

BLAST of Sed0027704 vs. NCBI nr
Match: KAA0049354.1 (putative C-8 sterol isomerase [Cucumis melo var. makuwa] >TYK17204.1 putative C-8 sterol isomerase [Cucumis melo var. makuwa])

HSP 1 Score: 551.6 bits (1420), Expect = 5.0e-153
Identity = 288/363 (79.34%), Postives = 309/363 (85.12%), Query Frame = 0


Query: 1   MKKILSTSTSSNSTNTATTATATASMEEDEL-----SCYYPGCRKDANCNCKICLDSINA 60
           MK +LSTS SSNST      T TA++E+DE      SCYYPGCRKDANC+CKICL+SINA
Sbjct: 1   MKTVLSTSVSSNST------TTTAAIEDDERSEARDSCYYPGCRKDANCDCKICLESINA 60

Query: 61  ILDLMPYSVQKSSLTKLSAS-GSNVETTPIVFNPSIFTTPTSGTSRILKCPNFKSPVKLS 120
            LDLMPYSVQKSSLTK S+S  +NVETTPI FNPSI TTPT+ TSRI K P F+SPVKL 
Sbjct: 61  TLDLMPYSVQKSSLTKFSSSRPNNVETTPISFNPSILTTPTTVTSRISKYPKFESPVKLG 120

Query: 121 SSFKAEEEERDSSSLCRFVTLVFVLSLIFSVIAGFSCAIARVTRPKLSAEIVRTAGKNSQ 180
           S FK EE  RDSSSL RFVTLVFVLSLI +V  GFSCAIARV RPKLSAEIVRTA KNSQ
Sbjct: 121 SKFKVEEGGRDSSSLRRFVTLVFVLSLILAVTTGFSCAIARVIRPKLSAEIVRTASKNSQ 180

Query: 181 FVQDLNGKLRVLQRELQGMVSEEISNCSYSNSMWEIDQEGMLLSSRCTMYKSATEAVSIW 240
           FVQDLNGKLRVL+RE QGMV+ EISNCSYSNS WEIDQEGM+LSS+C MYKSATE VSIW
Sbjct: 181 FVQDLNGKLRVLEREFQGMVNAEISNCSYSNSYWEIDQEGMILSSKCIMYKSATETVSIW 240

Query: 241 GWPLQTAGLLRTGFSHRSFTILSGRVTEWSDGGIGFVVRETNDSWVQKRWGASAVQLDPH 300
           GWPLQTAGLLRTGFS RSFTILSGR+TEWSDGGIG++VRE N SWVQKRWGASAVQLDP+
Sbjct: 241 GWPLQTAGLLRTGFSQRSFTILSGRLTEWSDGGIGYLVREANTSWVQKRWGASAVQLDPN 300

Query: 301 TWVLEYRQSSLFENSSLNVMAANFFKHWMSKVIRRLKNEFWLFLDVETKFHQTRATRDFK 358
           TWVLEYRQSSL ENSSLN MAA+FFKHWM  VIRRLKNE WLFLD E +FHQ  AT DFK
Sbjct: 301 TWVLEYRQSSLLENSSLNTMAADFFKHWMRIVIRRLKNELWLFLDGEIRFHQVTATSDFK 357

[Close]

BLAST of Sed0027704 vs. ExPASy TrEMBL
Match: A0A0A0LA81 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G146560 PE=3 SV=1)

HSP 1 Score: 567.0 bits (1460), Expect = 5.6e-158
Identity = 295/362 (81.49%), Postives = 313/362 (86.46%), Query Frame = 0


Query: 1   MKKILSTSTSSNSTNTATTATATASMEEDEL-----SCYYPGCRKDANCNCKICLDSINA 60
           MK +LSTS SSNST      T TA++E+DE      SCYYPGCRKDANC+CKICL+SINA
Sbjct: 1   MKTVLSTSVSSNST------TTTAAVEDDERSEARDSCYYPGCRKDANCDCKICLESINA 60

Query: 61  ILDLMPYSVQKSSLTKLSASGSNVETTPIVFNPSIFTTPTSGTSRILKCPNFKSPVKLSS 120
            LDLMPYSVQKSSLTKLSAS  NVETTPI FNPSI TTPT+ TSRI K P F+SPVKLSS
Sbjct: 61  TLDLMPYSVQKSSLTKLSASRPNVETTPISFNPSILTTPTTVTSRISKYPKFESPVKLSS 120

Query: 121 SFKAEEEERDSSSLCRFVTLVFVLSLIFSVIAGFSCAIARVTRPKLSAEIVRTAGKNSQF 180
            FKAEE  RDSSSL RFVTLVFVLSLI +V  GFSCAIARV RPKLSAEIVRTA KNSQF
Sbjct: 121 KFKAEEGGRDSSSLRRFVTLVFVLSLILAVTTGFSCAIARVIRPKLSAEIVRTASKNSQF 180

Query: 181 VQDLNGKLRVLQRELQGMVSEEISNCSYSNSMWEIDQEGMLLSSRCTMYKSATEAVSIWG 240
           VQ+LNGKLRVL+RELQGMV+ EISNCSYSNS WEIDQEGM+LSS+CTMYKSATE VSIWG
Sbjct: 181 VQNLNGKLRVLERELQGMVNAEISNCSYSNSYWEIDQEGMILSSKCTMYKSATETVSIWG 240

Query: 241 WPLQTAGLLRTGFSHRSFTILSGRVTEWSDGGIGFVVRETNDSWVQKRWGASAVQLDPHT 300
           WPLQTAGLLRTGFS RSFTILSGRVTEWSDGGIG++VRE N SWVQKRWGASAVQLDPHT
Sbjct: 241 WPLQTAGLLRTGFSQRSFTILSGRVTEWSDGGIGYLVREANTSWVQKRWGASAVQLDPHT 300

Query: 301 WVLEYRQSSLFENSSLNVMAANFFKHWMSKVIRRLKNEFWLFLDVETKFHQTRATRDFKT 358
           WVLEYRQSSL ENSSLN+MAA+FFKHWM  VIRRLKNE WLFLD ET FHQ   T DFKT
Sbjct: 301 WVLEYRQSSLLENSSLNMMAADFFKHWMRIVIRRLKNELWLFLDGETNFHQITVTSDFKT 356

[Close]

BLAST of Sed0027704 vs. ExPASy TrEMBL
Match: A0A6J1IQ96 (uncharacterized protein LOC111479541 OS=Cucurbita maxima OX=3661 GN=LOC111479541 PE=3 SV=1)

HSP 1 Score: 552.7 bits (1423), Expect = 1.1e-153
Identity = 289/367 (78.75%), Postives = 310/367 (84.47%), Query Frame = 0


Query: 1   MKKILSTSTSSNSTNTATTATATASM----EEDEL-----SCYYPGCRKDANCNCKICLD 60
           MK +LS+S SSNST T  T  AT  +    EEDE      SCYYPGCRKDANCNCKICLD
Sbjct: 1   MKTVLSSSASSNSTITTATTAATTPVTFAGEEDERSEARDSCYYPGCRKDANCNCKICLD 60

Query: 61  SINAILDLMPYSVQKSSLTKLSASGSNVETTPIVFNPSIFTTPTSGTSRILKCPNFKSPV 120
           SINA LDLMPYSVQKSSLTKLSAS  N+ETTPI FNPSI TTPTSGTSRIL  P FKSPV
Sbjct: 61  SINATLDLMPYSVQKSSLTKLSASRPNLETTPISFNPSILTTPTSGTSRILNYPKFKSPV 120

Query: 121 KLSSSFKAEEEERDSSSLCRFVTLVFVLSLIFSVIAGFSCAIARVTRPKLSAEIVRTAGK 180
           KL+S FKAEE E+DSS   RFVTL+FV+ LIF+  +GFSCAIA V RPKLSAEIVRTA K
Sbjct: 121 KLTSRFKAEEGEKDSSKFRRFVTLIFVICLIFAATSGFSCAIAAVFRPKLSAEIVRTASK 180

Query: 181 NSQFVQDLNGKLRVLQRELQGMVSEEISNCSYSNSMWEIDQEGMLLSSRCTMYKSATEAV 240
            SQFV+DLNGK RVLQR LQ MV+ EISNCS+SNS WEIDQEGMLL S+CTMYKSATEAV
Sbjct: 181 KSQFVEDLNGKFRVLQRVLQEMVNGEISNCSHSNSYWEIDQEGMLLCSKCTMYKSATEAV 240

Query: 241 SIWGWPLQTAGLLRTGFSHRSFTILSGRVTEWSDGGIGFVVRETNDSWVQKRWGASAVQL 300
           SIWGWPLQTAGLLRTGFS RSFTILSGRVTEWSDGGIG++VRE N SWVQ +WGASAV L
Sbjct: 241 SIWGWPLQTAGLLRTGFSQRSFTILSGRVTEWSDGGIGYLVREANTSWVQNKWGASAVHL 300

Query: 301 DPHTWVLEYRQSSLFENSSLNVMAANFFKHWMSKVIRRLKNEFWLFLDVETKFHQ-TRAT 358
           DP TWVLEYRQSSL ENSSLNVMAA+FFKHWM+KVIRRLKNE W+FLDV TKFH+   AT
Sbjct: 301 DPRTWVLEYRQSSLLENSSLNVMAADFFKHWMTKVIRRLKNEVWVFLDVGTKFHEIITAT 360

[Close]

BLAST of Sed0027704 vs. ExPASy TrEMBL
Match: A0A5A7U224 (Putative C-8 sterol isomerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00500 PE=3 SV=1)

HSP 1 Score: 551.6 bits (1420), Expect = 2.4e-153
Identity = 288/363 (79.34%), Postives = 309/363 (85.12%), Query Frame = 0


Query: 1   MKKILSTSTSSNSTNTATTATATASMEEDEL-----SCYYPGCRKDANCNCKICLDSINA 60
           MK +LSTS SSNST      T TA++E+DE      SCYYPGCRKDANC+CKICL+SINA
Sbjct: 1   MKTVLSTSVSSNST------TTTAAIEDDERSEARDSCYYPGCRKDANCDCKICLESINA 60

Query: 61  ILDLMPYSVQKSSLTKLSAS-GSNVETTPIVFNPSIFTTPTSGTSRILKCPNFKSPVKLS 120
            LDLMPYSVQKSSLTK S+S  +NVETTPI FNPSI TTPT+ TSRI K P F+SPVKL 
Sbjct: 61  TLDLMPYSVQKSSLTKFSSSRPNNVETTPISFNPSILTTPTTVTSRISKYPKFESPVKLG 120

Query: 121 SSFKAEEEERDSSSLCRFVTLVFVLSLIFSVIAGFSCAIARVTRPKLSAEIVRTAGKNSQ 180
           S FK EE  RDSSSL RFVTLVFVLSLI +V  GFSCAIARV RPKLSAEIVRTA KNSQ
Sbjct: 121 SKFKVEEGGRDSSSLRRFVTLVFVLSLILAVTTGFSCAIARVIRPKLSAEIVRTASKNSQ 180

Query: 181 FVQDLNGKLRVLQRELQGMVSEEISNCSYSNSMWEIDQEGMLLSSRCTMYKSATEAVSIW 240
           FVQDLNGKLRVL+RE QGMV+ EISNCSYSNS WEIDQEGM+LSS+C MYKSATE VSIW
Sbjct: 181 FVQDLNGKLRVLEREFQGMVNAEISNCSYSNSYWEIDQEGMILSSKCIMYKSATETVSIW 240

Query: 241 GWPLQTAGLLRTGFSHRSFTILSGRVTEWSDGGIGFVVRETNDSWVQKRWGASAVQLDPH 300
           GWPLQTAGLLRTGFS RSFTILSGR+TEWSDGGIG++VRE N SWVQKRWGASAVQLDP+
Sbjct: 241 GWPLQTAGLLRTGFSQRSFTILSGRLTEWSDGGIGYLVREANTSWVQKRWGASAVQLDPN 300

Query: 301 TWVLEYRQSSLFENSSLNVMAANFFKHWMSKVIRRLKNEFWLFLDVETKFHQTRATRDFK 358
           TWVLEYRQSSL ENSSLN MAA+FFKHWM  VIRRLKNE WLFLD E +FHQ  AT DFK
Sbjct: 301 TWVLEYRQSSLLENSSLNTMAADFFKHWMRIVIRRLKNELWLFLDGEIRFHQVTATSDFK 357

[Close]

BLAST of Sed0027704 vs. ExPASy TrEMBL
Match: A0A6J1GTT0 (uncharacterized protein LOC111457471 OS=Cucurbita moschata OX=3662 GN=LOC111457471 PE=3 SV=1)

HSP 1 Score: 551.6 bits (1420), Expect = 2.4e-153
Identity = 288/365 (78.90%), Postives = 311/365 (85.21%), Query Frame = 0


Query: 1   MKKILSTSTSSNSTNT--ATTATATASMEEDEL-----SCYYPGCRKDANCNCKICLDSI 60
           MK +LS+S SSNST T  ATT   T + EEDE      SCYYPGCRKDANCNCKICLDSI
Sbjct: 1   MKTVLSSSASSNSTITTAATTNPVTVAGEEDERSEARDSCYYPGCRKDANCNCKICLDSI 60

Query: 61  NAILDLMPYSVQKSSLTKLSASGSNVETTPIVFNPSIFTTPTSGTSRILKCPNFKSPVKL 120
           NA LDLMPYSVQKSSLTKLSAS  N+ETTPI FNPSI TTPTSGTSRIL  P FKSPVKL
Sbjct: 61  NATLDLMPYSVQKSSLTKLSASRPNLETTPISFNPSILTTPTSGTSRILNYPKFKSPVKL 120

Query: 121 SSSFKAEEEERDSSSLCRFVTLVFVLSLIFSVIAGFSCAIARVTRPKLSAEIVRTAGKNS 180
           +S FKAEE E+DSS   R VTL+FV+ LIF+  +GFSCAIA V +PKLSAEIVRTA K S
Sbjct: 121 TSRFKAEEGEKDSSKFRRLVTLIFVICLIFAATSGFSCAIAAVFQPKLSAEIVRTASKKS 180

Query: 181 QFVQDLNGKLRVLQRELQGMVSEEISNCSYSNSMWEIDQEGMLLSSRCTMYKSATEAVSI 240
           QFV+DLNGK RVLQR LQ M++ EISNCS+SNS WEIDQEGMLLSS+CTMYKSATEAVSI
Sbjct: 181 QFVEDLNGKFRVLQRVLQEMMNGEISNCSHSNSYWEIDQEGMLLSSKCTMYKSATEAVSI 240

Query: 241 WGWPLQTAGLLRTGFSHRSFTILSGRVTEWSDGGIGFVVRETNDSWVQKRWGASAVQLDP 300
           WGWPLQTAGLLRTGFS RSFTILSGRVTEWSDGGIG++VRE N SWVQ +WGASAV LDP
Sbjct: 241 WGWPLQTAGLLRTGFSQRSFTILSGRVTEWSDGGIGYLVREANTSWVQNKWGASAVHLDP 300

Query: 301 HTWVLEYRQSSLFENSSLNVMAANFFKHWMSKVIRRLKNEFWLFLDVETKFHQ-TRATRD 358
           HTWVLEYRQSSL ENSSLNVMAA+FFKHWM KV+RRLKNE W+FLDV TKFH+   ATRD
Sbjct: 301 HTWVLEYRQSSLLENSSLNVMAADFFKHWMMKVMRRLKNEVWVFLDVGTKFHEIITATRD 360

[Close]

BLAST of Sed0027704 vs. ExPASy TrEMBL
Match: A0A1S3AXM0 (uncharacterized protein LOC103483702 OS=Cucumis melo OX=3656 GN=LOC103483702 PE=3 SV=1)

HSP 1 Score: 550.4 bits (1417), Expect = 5.4e-153
Identity = 288/363 (79.34%), Postives = 308/363 (84.85%), Query Frame = 0


Query: 1   MKKILSTSTSSNSTNTATTATATASMEEDEL-----SCYYPGCRKDANCNCKICLDSINA 60
           MK +LSTS SSNST      T TA++E+DE      SCYYPGCRKDANC+CKICL+SINA
Sbjct: 1   MKTVLSTSVSSNST------TTTAAIEDDERSEARDSCYYPGCRKDANCDCKICLESINA 60

Query: 61  ILDLMPYSVQKSSLTKLSAS-GSNVETTPIVFNPSIFTTPTSGTSRILKCPNFKSPVKLS 120
            LDLMPYSVQKSSLTKLSAS  +NVETTPI FNPSI TTPT+ TSRI K P F+SPVKL 
Sbjct: 61  TLDLMPYSVQKSSLTKLSASRPNNVETTPISFNPSILTTPTTVTSRISKYPKFESPVKLG 120

Query: 121 SSFKAEEEERDSSSLCRFVTLVFVLSLIFSVIAGFSCAIARVTRPKLSAEIVRTAGKNSQ 180
           S FK EE  RDSSSL RFVTLVFVLSLI +V  GFSCAIARV RPKLSAEIVRTA KNSQ
Sbjct: 121 SKFKVEEGGRDSSSLRRFVTLVFVLSLILAVTTGFSCAIARVIRPKLSAEIVRTASKNSQ 180

Query: 181 FVQDLNGKLRVLQRELQGMVSEEISNCSYSNSMWEIDQEGMLLSSRCTMYKSATEAVSIW 240
           FVQDLNGKLRVL+RE QG V+ EISNCSYSNS WEIDQEGM+LSS+C MYKSATE VSIW
Sbjct: 181 FVQDLNGKLRVLEREFQGTVNAEISNCSYSNSYWEIDQEGMILSSKCIMYKSATETVSIW 240

Query: 241 GWPLQTAGLLRTGFSHRSFTILSGRVTEWSDGGIGFVVRETNDSWVQKRWGASAVQLDPH 300
           GWPLQTAGLLRTGFS RSFTILSGR+TEWSDGGIG++VRE N SWVQKRWGASAVQLDP+
Sbjct: 241 GWPLQTAGLLRTGFSQRSFTILSGRLTEWSDGGIGYLVREANTSWVQKRWGASAVQLDPN 300

Query: 301 TWVLEYRQSSLFENSSLNVMAANFFKHWMSKVIRRLKNEFWLFLDVETKFHQTRATRDFK 358
           TWVLEYRQSSL ENSSLN MAA+FFKHWM  VIRRLKNE WLFLD E +FHQ   T DFK
Sbjct: 301 TWVLEYRQSSLLENSSLNTMAADFFKHWMRIVIRRLKNELWLFLDGEIRFHQVTVTSDFK 357

[Close]

BLAST of Sed0027704 vs. TAIR 10
Match: AT1G05440.1 (C-8 sterol isomerases )

HSP 1 Score: 296.2 bits (757), Expect = 3.5e-80
Identity = 163/366 (44.54%), Postives = 234/366 (63.93%), Query Frame = 0


Query: 6   STSTSSNSTNTATTATATASMEEDELSCYYPGCRKDANCNCKICLDSINAILDLMPYSVQ 65
           S ++S+ +T T TT  +T   E  + +CY+P CRKDANC+C+ICLDS+NA LDLMP SVQ
Sbjct: 19  SMTSSTTTTTTTTTTVSTEDWERRDSNCYFPDCRKDANCSCEICLDSLNATLDLMPLSVQ 78

Query: 66  KSSLTKLSASG---SNVETTPIVFNPSIFTTPTSGTSRILK---CPNFKSPVKLSSSFKA 125
           KSSLTKLS++    S VE+TP  F+P++ TTP S +  ILK       K   K S  F+ 
Sbjct: 79  KSSLTKLSSASNFKSTVESTPTSFDPTVVTTPASVSRPILKLMISSPKKKLTKKSKVFEN 138

Query: 126 EEEERDSSSLCRFVTLVF-----VLSLIFSVIAGFSCAIARVTRPKLSAEIVRTAGKNSQ 185
           EE+ + +    R + +VF     V+ L+  +  GFS  +  V +P+ + EIVR A + +Q
Sbjct: 139 EEQRKTTKKERRLLIVVFLKVILVIGLVLGLELGFSWVLEEVFKPEFTEEIVRNAYERTQ 198

Query: 186 FVQDLNGKLRVLQRELQGMV-SEEISNCSYSNSMWEIDQEGMLLSSRCTMYKSATEAVSI 245
              DL  KLR+L+ E +G V S + S C+ S+S W+I+Q+G +L+S+C +YKSA E VSI
Sbjct: 199 ADLDLGVKLRLLEDEFKGFVTSRKFSRCTGSDSKWKINQDGPMLNSKCVLYKSAIEEVSI 258

Query: 246 WGWPLQTAGLLRTGFSHRSFTILSGRVTEWSDGGIGFVVRETNDSWVQKRWGASAVQLDP 305
           WGWPLQT+GL  TGFS  S T+LSGRVTEW++G  G+ + ETN SW + +W  S +QLDP
Sbjct: 259 WGWPLQTSGLFHTGFSSSSITVLSGRVTEWTEGKFGYSIHETNTSWGKTKWSTSVLQLDP 318

Query: 306 HTWVLEYRQSSLF-ENSSLNVMAANFFKHWMSKVIRRLKNE-FWLFLDVETKFHQTRATR 358
           +TWVLEY QSS+  ++SSL  +  +  +H + +V + +  E +W+F      + +  +  
Sbjct: 319 NTWVLEYSQSSVMDDSSSLLSLTIDIMEHLVFRVAKNVNRERYWMFSSSRRLYREAESKA 378

The following BLAST results are available for this feature:

BLAST of Sed0027704 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902337.1	5.3e-163	84.87	uncharacterized protein LOC120088951 [Benincasa hispida]	[more]
XP_004134442.1	1.1e-157	81.49	uncharacterized protein LOC101220408 [Cucumis sativus] >KGN56971.1 hypothetical ...	[more]
XP_023527177.1	2.2e-153	78.30	uncharacterized protein LOC111790490 [Cucurbita pepo subsp. pepo]	[more]
XP_022980007.1	2.2e-153	78.75	uncharacterized protein LOC111479541 [Cucurbita maxima]	[more]
KAA0049354.1	5.0e-153	79.34	putative C-8 sterol isomerase [Cucumis melo var. makuwa] >TYK17204.1 putative C-...	[more]

BLAST of Sed0027704 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0027704 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LA81	5.6e-158	81.49	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G146560 PE=3 SV=1	[more]
A0A6J1IQ96	1.1e-153	78.75	uncharacterized protein LOC111479541 OS=Cucurbita maxima OX=3661 GN=LOC111479541...	[more]
A0A5A7U224	2.4e-153	79.34	Putative C-8 sterol isomerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A6J1GTT0	2.4e-153	78.90	uncharacterized protein LOC111457471 OS=Cucurbita moschata OX=3662 GN=LOC1114574...	[more]
A0A1S3AXM0	5.4e-153	79.34	uncharacterized protein LOC103483702 OS=Cucumis melo OX=3656 GN=LOC103483702 PE=...	[more]

BLAST of Sed0027704 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G05440.1	3.5e-80	44.54	C-8 sterol isomerases	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 176..196
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
IPR006716	ERG2/sigma1 receptor-like	PFAM	PF04622	ERG2_Sigma1R	coord: 163..302 e-value: 1.0E-7 score: 31.6
IPR006716	ERG2/sigma1 receptor-like	PANTHER	PTHR10868	SIGMA 1-TYPE OPIOID RECEPTOR-RELATED	coord: 32..350

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0027704.1	Sed0027704.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016853	isomerase activity