Sed0027639 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGAGGTAGAAGCTGCTGGGGAAGATCTAAATGGAAATAAAATGGTAAATGATTCTGTTGATGGCAAGGAAGTTAAAGCCAGGAAGTTCAGGAGATTTAAACATCCTGATGAAAGGGAGGGGAATAGTCATCTTGCCATGGATATTGTTAAAGGCAAAAGGAAACTTGAACTAGATGAAGTGAATACTGTGGTAGGAAAGAGGTCCCGAATCAACGAGATGAGTCATTTGAGTTTGGTGGTGGCTGGTGATCAGCTCTACCTATCATTATGAAAACATTATGCTGGAATGTTCGTGGAGTGAATAATTCACGGGCGTTCGCGGAACTTCTGGAGGTAGTTCGCCTTCAGAAGCCCAATTTATTGTTTCTTTCCGAAACTAAGTGTCGAAGGAATAGAATTAATTTTTTGAGATCTCGTTTGAATTTTAATAAGAGTTTTTAATTGATTGTATAGGCTTGAGGGGAGGCCTCGGTTTATTCTGGTCAGATGATATTGATTTGCGGATCCTTTCTTCCTCTCAAAATCATATTGATTGTGATATTTCAATGAATAATGGTAATTGGCGGTTTACTGGCATATATGGCTTCCCGGTTAATCACTTAAAGGCATTGACTTGGAAATTATTGAACGACTTGTCTTTGAATGTTGGGCTTTGGAGTTCTGAGAAGAAAGGTGGATCCAAAGAGATATCTCTTTGTATGGAGGAGTTTCGTGAGGCTACTGAGGATATTGGCCTTCAGGATCTAGGTTTGGTTGGTGAAATCTTTACTTGGCGCAACAGATGGACAAACGGTGCTCCTATATTCAAACGGCTGGATAGATTTTTGGAAAGTAAAGACTTTTGTAATCTTTTCCCCCATTTGAAGGTTGTCCATCTGGATTGGTATGCTTCAGATCACAAACCGATCTGTTTTATTTCTAATGGTGTTGAAAGCTCCTCTCAATATGTTAAGCCTATGTTCAGATTTGAAAAGTTTTGGACAGATGAGCCTTCTTGTATTGATTTAG ATGGAGGAGGTAGAAGCTGCTGGGGAAGATCTAAATGGAAATAAAATGGTAAATGATTCTGTTGATGGCAAGGAAGTTAAAGCCAGGAAGTTCAGGAGATTTAAACATCCTGATGAAAGGGAGGGGAATAGTCATCTTGCCATGGATATTGTTAAAGGCAAAAGGAAACTTGAACTAGATGAAGTGAATACTGTGGTAGGAAAGAGGTCCCGAATCAACGAGATGAGTCATTTGAGTTTGGTGGTGGCTGGCTTGAGGGGAGGCCTCGGTTTATTCTGGTCAGATGATATTGATTTGCGGATCCTTTCTTCCTCTCAAAATCATATTGATTGTGATATTTCAATGAATAATGGTAATTGGCGGTTTACTGGCATATATGGCTTCCCGGTTAATCACTTAAAGGCATTGACTTGGAAATTATTGAACGACTTGTCTTTGAATGTTGGGCTTTGGAGTTCTGAGAAGAAAGGTGGATCCAAAGAGATATCTCTTTGTATGGAGGAGTTTCGTGAGGCTACTGAGGATATTGGCCTTCAGGATCTAGGTTTGGTTGGTGAAATCTTTACTTGGCGCAACAGATGGACAAACGGTGCTCCTATATTCAAACGGCTGGATAGATTTTTGGAAAATTTGAAAAGTTTTGGACAGATGAGCCTTCTTGTATTGATTTAG ATGGAGGAGGTAGAAGCTGCTGGGGAAGATCTAAATGGAAATAAAATGGTAAATGATTCTGTTGATGGCAAGGAAGTTAAAGCCAGGAAGTTCAGGAGATTTAAACATCCTGATGAAAGGGAGGGGAATAGTCATCTTGCCATGGATATTGTTAAAGGCAAAAGGAAACTTGAACTAGATGAAGTGAATACTGTGGTAGGAAAGAGGTCCCGAATCAACGAGATGAGTCATTTGAGTTTGGTGGTGGCTGGCTTGAGGGGAGGCCTCGGTTTATTCTGGTCAGATGATATTGATTTGCGGATCCTTTCTTCCTCTCAAAATCATATTGATTGTGATATTTCAATGAATAATGGTAATTGGCGGTTTACTGGCATATATGGCTTCCCGGTTAATCACTTAAAGGCATTGACTTGGAAATTATTGAACGACTTGTCTTTGAATGTTGGGCTTTGGAGTTCTGAGAAGAAAGGTGGATCCAAAGAGATATCTCTTTGTATGGAGGAGTTTCGTGAGGCTACTGAGGATATTGGCCTTCAGGATCTAGGTTTGGTTGGTGAAATCTTTACTTGGCGCAACAGATGGACAAACGGTGCTCCTATATTCAAACGGCTGGATAGATTTTTGGAAAATTTGAAAAGTTTTGGACAGATGAGCCTTCTTGTATTGATTTAG MEEVEAAGEDLNGNKMVNDSVDGKEVKARKFRRFKHPDEREGNSHLAMDIVKGKRKLELDEVNTVVGKRSRINEMSHLSLVVAGLRGGLGLFWSDDIDLRILSSSQNHIDCDISMNNGNWRFTGIYGFPVNHLKALTWKLLNDLSLNVGLWSSEKKGGSKEISLCMEEFREATEDIGLQDLGLVGEIFTWRNRWTNGAPIFKRLDRFLENLKSFGQMSLLVLI Homology
BLAST of Sed0027639 vs. NCBI nr
Match: XP_023886153.1 (uncharacterized protein LOC111998282 [Quercus suber]) HSP 1 Score: 110.5 bits (275), Expect = 1.8e-20 Identity = 57/137 (41.61%), Postives = 78/137 (56.93%), Query Frame = 0
BLAST of Sed0027639 vs. NCBI nr
Match: XP_030936690.1 (uncharacterized protein LOC115961942 [Quercus lobata]) HSP 1 Score: 110.2 bits (274), Expect = 2.4e-20 Identity = 64/170 (37.65%), Postives = 86/170 (50.59%), Query Frame = 0
BLAST of Sed0027639 vs. NCBI nr
Match: XP_030939909.1 (uncharacterized protein LOC115964800 [Quercus lobata]) HSP 1 Score: 106.3 bits (264), Expect = 3.5e-19 Identity = 66/161 (40.99%), Postives = 84/161 (52.17%), Query Frame = 0
BLAST of Sed0027639 vs. NCBI nr
Match: XP_030924932.1 (uncharacterized protein LOC115951959 [Quercus lobata]) HSP 1 Score: 105.5 bits (262), Expect = 5.9e-19 Identity = 56/138 (40.58%), Postives = 79/138 (57.25%), Query Frame = 0
BLAST of Sed0027639 vs. NCBI nr
Match: KAG0523282.1 (hypothetical protein BDA96_07G110100 [Sorghum bicolor]) HSP 1 Score: 105.5 bits (262), Expect = 5.9e-19 Identity = 59/153 (38.56%), Postives = 83/153 (54.25%), Query Frame = 0
BLAST of Sed0027639 vs. ExPASy TrEMBL
Match: A0A1R3GNW3 (Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_24647 PE=4 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 7.1e-18 Identity = 56/152 (36.84%), Postives = 74/152 (48.68%), Query Frame = 0
BLAST of Sed0027639 vs. ExPASy TrEMBL
Match: A0A2N9EH45 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS1761 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 1.6e-17 Identity = 56/149 (37.58%), Postives = 80/149 (53.69%), Query Frame = 0
BLAST of Sed0027639 vs. ExPASy TrEMBL
Match: B8BD62 (Uncharacterized protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_30475 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 4.6e-17 Identity = 57/141 (40.43%), Postives = 74/141 (52.48%), Query Frame = 0
BLAST of Sed0027639 vs. ExPASy TrEMBL
Match: A0A7N2KQ83 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 4.6e-17 Identity = 56/133 (42.11%), Postives = 71/133 (53.38%), Query Frame = 0
BLAST of Sed0027639 vs. ExPASy TrEMBL
Match: F4NCI4 (Reverse transcriptase domain-containing protein OS=Beta vulgaris subsp. vulgaris OX=3555 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 4.6e-17 Identity = 57/138 (41.30%), Postives = 73/138 (52.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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