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Sed0027638 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GACTAAACCCATTGGCCCCGTCTATAAATACGGCTCCAATTTCTCCATTTTTCTATCAACGGAAAACCAGAGTGATTTTTCATTTTCGATTAAGAACTTTCATCAAAGTGCTTTGAGGTTGAAGATGAGTTACCTTAACAGAGTTGGAATGGCGGCGAGCGTAGCGGTGGCTCAAGGCCACACGGAGATCGGATCCAAGTGGAAGTCCGGACTCAAATCTCTCCGGCAGGGGCGGCGGCTTTTGGTTTCCGGTGAGAATACGGCGGATCTCCGGCCGCTTTCCAGTTTGGTTGGATCGGAAGGTCCTGAAGCCGTCCGGAGCTGTGACGCCGCCGAGAGGATAGCGCAGACCGATGATTCTCTCCGGCGAGTTATGTACTTGAACTGTTGGGGCCAGGGCTGATTTGGTGAGATGAAATTCAAGGTGATGCAAGAACGGATCTGGTCGGCGATGCGATCGGAGTTGGGGCTGATCAGGCGACATGAAATGGAAGGTATTAGATCTGGAATTGATGCGATGAAGATGAAGAATTGTGATCTATAACTTGAAGGATCGCTTTGTAGATTGGGGATAATTGTACAGAAATAGAGAATTGAACGGTTTCCACAAATAATAGAAATCTTGATTCTCTTTACTTTGCTTAATTTGAAGTTTATGTGCCTTTAATTAAGCTTAAACTGAACTGAACTGAACTGAAGCAACTTTGTGATAATTGGAAACATAATCAGATCCAGATCTGTGCTAGTTGCTTGATAAATATAAAACTGATTTGGGTCTGGAAATAATTGTGCTGAAGAGCGGATGTTTAAGATCAGATCTTTCACAGTGGACAGGGAATTTGATAGATTAGAAATCAAAGAACTATTTAATCTGCAATTAAAGATCAAGCAATCGAGATTTAGAGCCAAGTGATGAAATTCAATTTCTGTTTTCATGTGAATTATATCAATTTGTAGTTCAAGAATTTCCTCCACAGTTTCTGAAATCCATAAGATATCATGGAAATTAAAATGAAACCATCGTTGGTTTGTCTTGGTATTAAAAATGAGCATTCAAGATTCAGGGAATT GACTAAACCCATTGGCCCCGTCTATAAATACGGCTCCAATTTCTCCATTTTTCTATCAACGGAAAACCAGAGTGATTTTTCATTTTCGATTAAGAACTTTCATCAAAGTGCTTTGAGGTTGAAGATGAGTTACCTTAACAGAGTTGGAATGGCGGCGAGCGTAGCGGTGGCTCAAGGCCACACGGAGATCGGATCCAAGTGGAAGTCCGGACTCAAATCTCTCCGGCAGGGGCGGCGGCTTTTGGTTTCCGGTGAGAATACGGCGGATCTCCGGCCGCTTTCCAGTTTGGTTGGATCGGAAGGTCCTGAAGCCGTCCGGAGCTGTGACGCCGCCGAGAGGATAGCGCAGACCGATGATTCTCTCCGGCGAGTTATGTACTTGAACTGTTGGGGCCAGGGCTGATTTGGTGAGATGAAATTCAAGGTGATGCAAGAACGGATCTGGTCGGCGATGCGATCGGAGTTGGGGCTGATCAGGCGACATGAAATGGAAGGTATTAGATCTGGAATTGATGCGATGAAGATGAAGAATTGTGATCTATAACTTGAAGGATCGCTTTGTAGATTGGGGATAATTGTACAGAAATAGAGAATTGAACGGTTTCCACAAATAATAGAAATCTTGATTCTCTTTACTTTGCTTAATTTGAAGTTTATGTGCCTTTAATTAAGCTTAAACTGAACTGAACTGAACTGAAGCAACTTTGTGATAATTGGAAACATAATCAGATCCAGATCTGTGCTAGTTGCTTGATAAATATAAAACTGATTTGGGTCTGGAAATAATTGTGCTGAAGAGCGGATGTTTAAGATCAGATCTTTCACAGTGGACAGGGAATTTGATAGATTAGAAATCAAAGAACTATTTAATCTGCAATTAAAGATCAAGCAATCGAGATTTAGAGCCAAGTGATGAAATTCAATTTCTGTTTTCATGTGAATTATATCAATTTGTAGTTCAAGAATTTCCTCCACAGTTTCTGAAATCCATAAGATATCATGGAAATTAAAATGAAACCATCGTTGGTTTGTCTTGGTATTAAAAATGAGCATTCAAGATTCAGGGAATT ATGAGTTACCTTAACAGAGTTGGAATGGCGGCGAGCGTAGCGGTGGCTCAAGGCCACACGGAGATCGGATCCAAGTGGAAGTCCGGACTCAAATCTCTCCGGCAGGGGCGGCGGCTTTTGGTTTCCGGTGAGAATACGGCGGATCTCCGGCCGCTTTCCAGTTTGGTTGGATCGGAAGGTCCTGAAGCCGTCCGGAGCTGTGACGCCGCCGAGAGGATAGCGCAGACCGATGATTCTCTCCGGCGAGTTATGTACTTGAACTGTTGGGGCCAGGGCTGA MSYLNRVGMAASVAVAQGHTEIGSKWKSGLKSLRQGRRLLVSGENTADLRPLSSLVGSEGPEAVRSCDAAERIAQTDDSLRRVMYLNCWGQG Homology
BLAST of Sed0027638 vs. NCBI nr
Match: KAG7011951.1 (hypothetical protein SDJN02_26859, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 167.2 bits (422), Expect = 6.8e-38 Identity = 84/92 (91.30%), Postives = 86/92 (93.48%), Query Frame = 0
BLAST of Sed0027638 vs. NCBI nr
Match: KAG6572339.1 (hypothetical protein SDJN03_29067, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 166.0 bits (419), Expect = 1.5e-37 Identity = 83/92 (90.22%), Postives = 86/92 (93.48%), Query Frame = 0
BLAST of Sed0027638 vs. NCBI nr
Match: KAG6589197.1 (hypothetical protein SDJN03_17762, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022897.1 hypothetical protein SDJN02_16633, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 165.6 bits (418), Expect = 2.0e-37 Identity = 82/92 (89.13%), Postives = 87/92 (94.57%), Query Frame = 0
BLAST of Sed0027638 vs. NCBI nr
Match: KAE8645762.1 (hypothetical protein Csa_020269 [Cucumis sativus]) HSP 1 Score: 165.6 bits (418), Expect = 2.0e-37 Identity = 82/92 (89.13%), Postives = 86/92 (93.48%), Query Frame = 0
BLAST of Sed0027638 vs. NCBI nr
Match: KAA0031600.1 (wound-responsive family protein [Cucumis melo var. makuwa] >TYK07052.1 wound-responsive family protein [Cucumis melo var. makuwa]) HSP 1 Score: 165.6 bits (418), Expect = 2.0e-37 Identity = 82/92 (89.13%), Postives = 86/92 (93.48%), Query Frame = 0
BLAST of Sed0027638 vs. ExPASy TrEMBL
Match: A0A5A7SLJ2 (Wound-responsive family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003700 PE=4 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 9.6e-38 Identity = 82/92 (89.13%), Postives = 86/92 (93.48%), Query Frame = 0
BLAST of Sed0027638 vs. ExPASy TrEMBL
Match: A0A0A0K6Z3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046690 PE=4 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 9.6e-38 Identity = 82/92 (89.13%), Postives = 86/92 (93.48%), Query Frame = 0
BLAST of Sed0027638 vs. ExPASy TrEMBL
Match: A0A5N6RB28 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_014541 PE=4 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 9.7e-22 Identity = 56/92 (60.87%), Postives = 69/92 (75.00%), Query Frame = 0
BLAST of Sed0027638 vs. ExPASy TrEMBL
Match: A0A2N9HZV9 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS45844 PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 1.3e-21 Identity = 55/92 (59.78%), Postives = 69/92 (75.00%), Query Frame = 0
BLAST of Sed0027638 vs. ExPASy TrEMBL
Match: A0A6A1VB48 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR6G020117 PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 6.3e-21 Identity = 54/92 (58.70%), Postives = 69/92 (75.00%), Query Frame = 0
BLAST of Sed0027638 vs. TAIR 10
Match: AT4G28240.1 (Wound-responsive family protein ) HSP 1 Score: 68.9 bits (167), Expect = 2.4e-12 Identity = 43/94 (45.74%), Postives = 57/94 (60.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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