Homology
BLAST of Sed0027623 vs. NCBI nr
Match:
KAG6596322.1 (putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1273.5 bits (3294), Expect = 0.0e+00
Identity = 617/685 (90.07%), Postives = 646/685 (94.31%), Query Frame = 0
Query: 1 MTSPSSPVISKALEIEKYLIHGVNSLKQLKHIHARLLRLDLDQHNHLLNILLCSALDLGF 60
+T+P+SPV SKALEI+ YL +GVN KQLKHIH RLLRL LDQ N+LLN LL LD G
Sbjct: 4 LTNPASPVFSKALEIKNYLANGVNCFKQLKHIHCRLLRLHLDQDNYLLNTLLSCGLDSGC 63
Query: 61 TNYAKLVFSQPKHPNIFLWNTVIRAFVSKDCFDEAIHVYGSMRTRGFLPNNFTFPFVFKA 120
TNY KLVFSQ K PNIFLWNT+IR VSKDCFD+AI VYGSMR GFLPNNFTFPFV KA
Sbjct: 64 TNYTKLVFSQAKEPNIFLWNTMIRGLVSKDCFDDAIDVYGSMRREGFLPNNFTFPFVLKA 123
Query: 121 CARKLDVRLGVNIHTLVVKAGFDSDVFVQTSLLSMYAKCAHLESALKVFDDIPNKNVASW 180
CARKLD+RLGV IHTLVVKAGFD DVFV+TSLLS+YAKC +LE+ALKVFDD+P+KNV SW
Sbjct: 124 CARKLDIRLGVKIHTLVVKAGFDYDVFVKTSLLSLYAKCDNLENALKVFDDMPDKNVVSW 183
Query: 181 TAIITGYIANGKFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRYISD 240
TAIITGYI +G+FREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRYISD
Sbjct: 184 TAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRYISD 243
Query: 241 SGLGRNVFVATSLLDMYVKCGNMEGANVIFVAMSEKDIVSWSTMIQGYAFNGLPKQALDL 300
GL RNVFVATSLLDMYVKCGNME AN+IF AMSEKDIVSWSTMIQGYAFNGLPKQALDL
Sbjct: 244 CGLVRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNGLPKQALDL 303
Query: 301 FFQMQSENFKPDCYTMVGVLSACAKLGALDLGIWASSLMDRHEFLSNPVLGTALIDMYSK 360
FFQMQSEN KPDCY MVGVLSACA+LGALDLGIWASSLMDRHEFLSNPVLGTALIDMYSK
Sbjct: 304 FFQMQSENLKPDCYAMVGVLSACARLGALDLGIWASSLMDRHEFLSNPVLGTALIDMYSK 363
Query: 361 CGSVARAWEIFQAMEKKDRVVWNAMIVGLSLNGHAKAVFSLFSLVEKHGIQPNENTFIGL 420
CGSV RAWEIF++MEKKDRVVWNAMIVGLS+NGHAKAVFSLFSLVEKHGI+P+ENTFIGL
Sbjct: 364 CGSVTRAWEIFRSMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGL 423
Query: 421 LCGCTHGGFVDEGRRYFNSMKRVFSLTPSIEHYGCMVDLLGRAGLLDEALQLINSMPMQP 480
LCGCTHGGFVDEGRRYF SMKRVFSLTPSIEHYGCMVDLLGRAGLLDEA +LINSMPMQP
Sbjct: 424 LCGCTHGGFVDEGRRYFYSMKRVFSLTPSIEHYGCMVDLLGRAGLLDEAHRLINSMPMQP 483
Query: 481 NAVVWGALLGGCRLHRDTHLAEQVLKKLIDLEPWNSGNYVLLSNIYSASQRWEEAEKIRS 540
NAVVWGALLGGCRLHRD+HLAEQVLKKLI+LEPWNSGNYVLLSNIYSAS RWEEAEKIRS
Sbjct: 484 NAVVWGALLGGCRLHRDSHLAEQVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEKIRS 543
Query: 541 VMKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSEKIYAKLDELGRELKAAGHVPTTEF 600
MKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLS+KIYAKLDELGRELKAAGHVPTTEF
Sbjct: 544 AMKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSDKIYAKLDELGRELKAAGHVPTTEF 603
Query: 601 VLFDIEEEEKEHFLGCHSEKLAVAFGLISSPSNHVIRVVKNLRVCGDCHDAIKLISKITG 660
VLFDIEEEEKEHFLGCHSEKLAVAFGLISSPSNHVIRVVKNLRVCGDCH+AIKLISKITG
Sbjct: 604 VLFDIEEEEKEHFLGCHSEKLAVAFGLISSPSNHVIRVVKNLRVCGDCHEAIKLISKITG 663
Query: 661 REIIIRDTNRFHTFIDGSCSCKDYW 686
REIIIRDTNRFHTFIDGSCSCKDYW
Sbjct: 664 REIIIRDTNRFHTFIDGSCSCKDYW 688
BLAST of Sed0027623 vs. NCBI nr
Match:
XP_022971519.1 (putative pentatricopeptide repeat-containing protein At3g08820 [Cucurbita maxima] >XP_022971520.1 putative pentatricopeptide repeat-containing protein At3g08820 [Cucurbita maxima])
HSP 1 Score: 1269.2 bits (3283), Expect = 0.0e+00
Identity = 614/685 (89.64%), Postives = 644/685 (94.01%), Query Frame = 0
Query: 1 MTSPSSPVISKALEIEKYLIHGVNSLKQLKHIHARLLRLDLDQHNHLLNILLCSALDLGF 60
+T+P+SPV SKALEI+ YL +GVN KQLKHIH RLLRL DQ N+LLN LL LD G
Sbjct: 4 LTNPASPVFSKALEIKNYLANGVNCFKQLKHIHCRLLRLHFDQDNYLLNTLLSCGLDSGC 63
Query: 61 TNYAKLVFSQPKHPNIFLWNTVIRAFVSKDCFDEAIHVYGSMRTRGFLPNNFTFPFVFKA 120
TNY KLVFSQ K PNIFLWNT+IR VSKDCFD+AI VYGSMR GFLPNNFTFPFV KA
Sbjct: 64 TNYTKLVFSQAKEPNIFLWNTMIRGLVSKDCFDDAIDVYGSMRREGFLPNNFTFPFVLKA 123
Query: 121 CARKLDVRLGVNIHTLVVKAGFDSDVFVQTSLLSMYAKCAHLESALKVFDDIPNKNVASW 180
CARKLD+RLGV IHTLVVKAGFD DVFV+TSLLS+YAKC +LE+ALKVFDD+P+KNV SW
Sbjct: 124 CARKLDIRLGVKIHTLVVKAGFDYDVFVKTSLLSLYAKCDNLENALKVFDDMPDKNVVSW 183
Query: 181 TAIITGYIANGKFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRYISD 240
TAIITGYI +G+FREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRYISD
Sbjct: 184 TAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRYISD 243
Query: 241 SGLGRNVFVATSLLDMYVKCGNMEGANVIFVAMSEKDIVSWSTMIQGYAFNGLPKQALDL 300
GL RNVFVATSLLDMYVKCGNME AN+IF AMSEKDIVSWSTMIQGYAFNGLPKQALDL
Sbjct: 244 CGLVRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNGLPKQALDL 303
Query: 301 FFQMQSENFKPDCYTMVGVLSACAKLGALDLGIWASSLMDRHEFLSNPVLGTALIDMYSK 360
FFQMQSEN KPDCY MVGVLSACA+LGALDLGIWASSLMD+HEFLSNPVLGTALIDMYSK
Sbjct: 304 FFQMQSENLKPDCYAMVGVLSACARLGALDLGIWASSLMDQHEFLSNPVLGTALIDMYSK 363
Query: 361 CGSVARAWEIFQAMEKKDRVVWNAMIVGLSLNGHAKAVFSLFSLVEKHGIQPNENTFIGL 420
CGSV RAWEIF++MEKKDRVVWNAMIVGLS+NGHAKAVFSLFSLVEKHGI+P+ENTFIGL
Sbjct: 364 CGSVTRAWEIFRSMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGL 423
Query: 421 LCGCTHGGFVDEGRRYFNSMKRVFSLTPSIEHYGCMVDLLGRAGLLDEALQLINSMPMQP 480
LCGCTHGGFVDEGRRYFNSMKRVFSLTPSIEHYGCMVDLLGRAGLLDEA +LINSMPMQP
Sbjct: 424 LCGCTHGGFVDEGRRYFNSMKRVFSLTPSIEHYGCMVDLLGRAGLLDEAHRLINSMPMQP 483
Query: 481 NAVVWGALLGGCRLHRDTHLAEQVLKKLIDLEPWNSGNYVLLSNIYSASQRWEEAEKIRS 540
NAVVWGALLGGCRLHRD+HLAEQVLKKLI+LEPWNSGNYVLLSNIYSAS RWEEAEKIRS
Sbjct: 484 NAVVWGALLGGCRLHRDSHLAEQVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEKIRS 543
Query: 541 VMKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSEKIYAKLDELGRELKAAGHVPTTEF 600
MKEQRIQKIRGCSWIEI GIVHEFLVGDKSHSLS+KIYAKLDELGRELKA GHVPTTEF
Sbjct: 544 AMKEQRIQKIRGCSWIEIHGIVHEFLVGDKSHSLSDKIYAKLDELGRELKAVGHVPTTEF 603
Query: 601 VLFDIEEEEKEHFLGCHSEKLAVAFGLISSPSNHVIRVVKNLRVCGDCHDAIKLISKITG 660
VLFDIEEEEKEHFLGCHSEKLAVAFGLISSPSNHVIRVVKNLRVCGDCH+AIKLISKITG
Sbjct: 604 VLFDIEEEEKEHFLGCHSEKLAVAFGLISSPSNHVIRVVKNLRVCGDCHEAIKLISKITG 663
Query: 661 REIIIRDTNRFHTFIDGSCSCKDYW 686
REIIIRDTNRFHTFIDGSCSCKDYW
Sbjct: 664 REIIIRDTNRFHTFIDGSCSCKDYW 688
BLAST of Sed0027623 vs. NCBI nr
Match:
XP_023538778.1 (putative pentatricopeptide repeat-containing protein At3g08820 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1268.8 bits (3282), Expect = 0.0e+00
Identity = 612/685 (89.34%), Postives = 645/685 (94.16%), Query Frame = 0
Query: 1 MTSPSSPVISKALEIEKYLIHGVNSLKQLKHIHARLLRLDLDQHNHLLNILLCSALDLGF 60
+T+P+SP+ SKALEI+ +L +GVN KQLKHIH RLLRL LDQ N+LLN LL LD G
Sbjct: 4 LTNPASPIFSKALEIKNFLANGVNCFKQLKHIHCRLLRLHLDQDNYLLNTLLSCGLDSGC 63
Query: 61 TNYAKLVFSQPKHPNIFLWNTVIRAFVSKDCFDEAIHVYGSMRTRGFLPNNFTFPFVFKA 120
TNY+KLVFSQ K PNIFLWNT+IR VSKDCFD+AI VYGSMR GFLPNNFTFPFV KA
Sbjct: 64 TNYSKLVFSQAKEPNIFLWNTMIRGLVSKDCFDDAIDVYGSMRREGFLPNNFTFPFVLKA 123
Query: 121 CARKLDVRLGVNIHTLVVKAGFDSDVFVQTSLLSMYAKCAHLESALKVFDDIPNKNVASW 180
CARKLD+RLGV IHTLVVKAGFD DVFV+TSLLS+YAKC +LE+ALKVFDD+P+KNV SW
Sbjct: 124 CARKLDIRLGVKIHTLVVKAGFDYDVFVKTSLLSLYAKCDNLENALKVFDDMPDKNVVSW 183
Query: 181 TAIITGYIANGKFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRYISD 240
TAIITGYI +G+FREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRYISD
Sbjct: 184 TAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRYISD 243
Query: 241 SGLGRNVFVATSLLDMYVKCGNMEGANVIFVAMSEKDIVSWSTMIQGYAFNGLPKQALDL 300
G RNVFVATSLLDMYVKCGNME AN+IF AMSEKDIVSWSTMIQGYAFNGLPKQALDL
Sbjct: 244 CGFVRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNGLPKQALDL 303
Query: 301 FFQMQSENFKPDCYTMVGVLSACAKLGALDLGIWASSLMDRHEFLSNPVLGTALIDMYSK 360
FFQMQSEN KPDCY MVGVLSACA+LGALDLGIWAS LMDRHEFLSNPVLGTALIDMYSK
Sbjct: 304 FFQMQSENLKPDCYAMVGVLSACARLGALDLGIWASGLMDRHEFLSNPVLGTALIDMYSK 363
Query: 361 CGSVARAWEIFQAMEKKDRVVWNAMIVGLSLNGHAKAVFSLFSLVEKHGIQPNENTFIGL 420
CGSV RAWEIF++MEKKDRVVWNAMIVGLS+NGHAKAVFSLFSLVEKHGI+P+ENTFIGL
Sbjct: 364 CGSVTRAWEIFRSMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGL 423
Query: 421 LCGCTHGGFVDEGRRYFNSMKRVFSLTPSIEHYGCMVDLLGRAGLLDEALQLINSMPMQP 480
LCGCTHGGFVDEGRRYFNSMKRVFSLTPSIEHYGCMVDLLGRAGLLDEA +LINSMPMQP
Sbjct: 424 LCGCTHGGFVDEGRRYFNSMKRVFSLTPSIEHYGCMVDLLGRAGLLDEAHRLINSMPMQP 483
Query: 481 NAVVWGALLGGCRLHRDTHLAEQVLKKLIDLEPWNSGNYVLLSNIYSASQRWEEAEKIRS 540
NAVVWGALLGGCRLHRD+HLAEQVLKKLI+LEPWNSGNYVLLSNIYSAS RWEEAEKIRS
Sbjct: 484 NAVVWGALLGGCRLHRDSHLAEQVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEKIRS 543
Query: 541 VMKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSEKIYAKLDELGRELKAAGHVPTTEF 600
MKE+RIQKIRGCSWIEIDGIVHEFLVGDKSHSLS+KIYAKLDELGRELKA GHVPTTEF
Sbjct: 544 AMKEKRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSDKIYAKLDELGRELKAVGHVPTTEF 603
Query: 601 VLFDIEEEEKEHFLGCHSEKLAVAFGLISSPSNHVIRVVKNLRVCGDCHDAIKLISKITG 660
VLFDIEEEEKEHFLGCHSEKLAVAFGLISSPSNHVIRVVKNLRVCGDCH+AIKLISKITG
Sbjct: 604 VLFDIEEEEKEHFLGCHSEKLAVAFGLISSPSNHVIRVVKNLRVCGDCHEAIKLISKITG 663
Query: 661 REIIIRDTNRFHTFIDGSCSCKDYW 686
REIIIRDTNRFHTFIDGSCSCKDYW
Sbjct: 664 REIIIRDTNRFHTFIDGSCSCKDYW 688
BLAST of Sed0027623 vs. NCBI nr
Match:
XP_022951275.1 (putative pentatricopeptide repeat-containing protein At3g08820 [Cucurbita moschata] >XP_022951285.1 putative pentatricopeptide repeat-containing protein At3g08820 [Cucurbita moschata])
HSP 1 Score: 1263.4 bits (3268), Expect = 0.0e+00
Identity = 614/685 (89.64%), Postives = 646/685 (94.31%), Query Frame = 0
Query: 1 MTSPSSPVISKALEIEKYLIHGVNSLKQLKHIHARLLRLDLDQHNHLLNILLCSALDLGF 60
+T+P+SPV SKALEI+ YL +GVN KQLKHIH RLLRL LDQ N+LLN LL S LD G
Sbjct: 4 LTNPASPVFSKALEIKNYLANGVNCFKQLKHIHCRLLRLHLDQDNYLLNTLLSSGLDSGC 63
Query: 61 TNYAKLVFSQPKHPNIFLWNTVIRAFVSKDCFDEAIHVYGSMRTRGFLPNNFTFPFVFKA 120
T+Y+KLVFSQ K PNIFLWNT+IR VSKDCFD+AI VYGSMR GFLPNNFTFPFV KA
Sbjct: 64 TDYSKLVFSQAKEPNIFLWNTMIRGLVSKDCFDDAIDVYGSMRREGFLPNNFTFPFVLKA 123
Query: 121 CARKLDVRLGVNIHTLVVKAGFDSDVFVQTSLLSMYAKCAHLESALKVFDDIPNKNVASW 180
CARKLD+RLGV IHTLVVKAGFD DVFV+TSLLS+YAKC +LE+ALKVFDD+P+KNV SW
Sbjct: 124 CARKLDIRLGVKIHTLVVKAGFDYDVFVKTSLLSLYAKCDNLENALKVFDDMPDKNVVSW 183
Query: 181 TAIITGYIANGKFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRYISD 240
TAIITGYI +G+FREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRYISD
Sbjct: 184 TAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRYISD 243
Query: 241 SGLGRNVFVATSLLDMYVKCGNMEGANVIFVAMSEKDIVSWSTMIQGYAFNGLPKQALDL 300
G RNVFVATSLLDMYVKCGNME AN+IF AMSEKDIVSWSTMIQGYAFNGLPKQALDL
Sbjct: 244 CGFVRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNGLPKQALDL 303
Query: 301 FFQMQSENFKPDCYTMVGVLSACAKLGALDLGIWASSLMDRHEFLSNPVLGTALIDMYSK 360
FFQMQSEN KPDCY MVGVLSACA+LGALDLGIWASSLMDRHEFLSNPVLGTALIDMYSK
Sbjct: 304 FFQMQSENLKPDCYAMVGVLSACARLGALDLGIWASSLMDRHEFLSNPVLGTALIDMYSK 363
Query: 361 CGSVARAWEIFQAMEKKDRVVWNAMIVGLSLNGHAKAVFSLFSLVEKHGIQPNENTFIGL 420
CGSV RAWEIF++MEKKDRVVWNAMIVGLS+NGHAKAVFSLFSLV KHGI+P+ENTFIGL
Sbjct: 364 CGSVTRAWEIFRSMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVGKHGIRPDENTFIGL 423
Query: 421 LCGCTHGGFVDEGRRYFNSMKRVFSLTPSIEHYGCMVDLLGRAGLLDEALQLINSMPMQP 480
LCGCTHGGFVDEGRRYFNSMK+VFSLTPSIEHYGCMVDLLGRAGLLDEA +LINSMPMQP
Sbjct: 424 LCGCTHGGFVDEGRRYFNSMKQVFSLTPSIEHYGCMVDLLGRAGLLDEAHRLINSMPMQP 483
Query: 481 NAVVWGALLGGCRLHRDTHLAEQVLKKLIDLEPWNSGNYVLLSNIYSASQRWEEAEKIRS 540
NAVVWGALLGGCRLHRD+HLAEQVLKKLI+LEPWNSGNYVLLSNIYSAS RWEEAEKIRS
Sbjct: 484 NAVVWGALLGGCRLHRDSHLAEQVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEKIRS 543
Query: 541 VMKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSEKIYAKLDELGRELKAAGHVPTTEF 600
MKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLS+KIYAKLDELGRELKAAGHVPTTEF
Sbjct: 544 AMKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSDKIYAKLDELGRELKAAGHVPTTEF 603
Query: 601 VLFDIEEEEKEHFLGCHSEKLAVAFGLISSPSNHVIRVVKNLRVCGDCHDAIKLISKITG 660
VLFDIEEEEKEHFLGCHSEKLAVAFGLISS SNHVIRVVKNLRVCGDCH+AIKLISKITG
Sbjct: 604 VLFDIEEEEKEHFLGCHSEKLAVAFGLISS-SNHVIRVVKNLRVCGDCHEAIKLISKITG 663
Query: 661 REIIIRDTNRFHTFIDGSCSCKDYW 686
REIIIRDTNRFHTFIDGSCSCKDYW
Sbjct: 664 REIIIRDTNRFHTFIDGSCSCKDYW 687
BLAST of Sed0027623 vs. NCBI nr
Match:
KAG7027873.1 (putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1251.9 bits (3238), Expect = 0.0e+00
Identity = 609/676 (90.09%), Postives = 638/676 (94.38%), Query Frame = 0
Query: 1 MTSPSSPVISKALEIEKYLIHGVNSLKQLKHIHARLLRLDLDQHNHLLNILLCSALDLGF 60
+T+P+SPV SKALEI+ YL +GVN KQLKHIH RLLRL LDQ N+LLN LL LD G
Sbjct: 4 LTNPASPVFSKALEIKNYLANGVNCFKQLKHIHCRLLRLHLDQDNYLLNTLLSCGLDSGC 63
Query: 61 TNYAKLVFSQPKHPNIFLWNTVIRAFVSKDCFDEAIHVYGSMRTRGFLPNNFTFPFVFKA 120
TNY KLVFSQ K PNIFLWNT+IR VSKDCFD+AI VYGSMR GFLPNNFTFPFV KA
Sbjct: 64 TNYTKLVFSQAKEPNIFLWNTMIRGLVSKDCFDDAIDVYGSMRREGFLPNNFTFPFVLKA 123
Query: 121 CARKLDVRLGVNIHTLVVKAGFDSDVFVQTSLLSMYAKCAHLESALKVFDDIPNKNVASW 180
CARKLD+RLGV IHTLVVKAGFD DVFV+TSLLS+YAKC +LE+ALKVFDD+P+KNV SW
Sbjct: 124 CARKLDIRLGVKIHTLVVKAGFDYDVFVKTSLLSLYAKCDNLENALKVFDDMPDKNVVSW 183
Query: 181 TAIITGYIANGKFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRYISD 240
TAIITGYI +G+FREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRYISD
Sbjct: 184 TAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRYISD 243
Query: 241 SGLGRNVFVATSLLDMYVKCGNMEGANVIFVAMSEKDIVSWSTMIQGYAFNGLPKQALDL 300
GL RNVFVATSLLDMYVKCGNME AN+IF AMSEKDIVSWSTMIQGYAFNGLPKQALDL
Sbjct: 244 CGLVRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNGLPKQALDL 303
Query: 301 FFQMQSENFKPDCYTMVGVLSACAKLGALDLGIWASSLMDRHEFLSNPVLGTALIDMYSK 360
FFQMQSEN KPDCY MVGVLSACA+LGALDLGIWASSLMDRHEFLSNPVLGTALIDMYSK
Sbjct: 304 FFQMQSENLKPDCYAMVGVLSACARLGALDLGIWASSLMDRHEFLSNPVLGTALIDMYSK 363
Query: 361 CGSVARAWEIFQAMEKKDRVVWNAMIVGLSLNGHAKAVFSLFSLVEKHGIQPNENTFIGL 420
CGSV RAWEIF++MEKKDRVVWNAMIVGLS+NGHAKAVFSLFSLVEKHGI+P+ENTFIGL
Sbjct: 364 CGSVTRAWEIFRSMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGL 423
Query: 421 LCGCTHGGFVDEGRRYFNSMKRVFSLTPSIEHYGCMVDLLGRAGLLDEALQLINSMPMQP 480
LCGCTHGGFVDEGRRYFNSMKRVFSLTPSIEHYGCMVDLLGRAGLLDEA QLINSMPMQP
Sbjct: 424 LCGCTHGGFVDEGRRYFNSMKRVFSLTPSIEHYGCMVDLLGRAGLLDEAHQLINSMPMQP 483
Query: 481 NAVVWGALLGGCRLHRDTHLAEQVLKKLIDLEPWNSGNYVLLSNIYSASQRWEEAEKIRS 540
NAVVWGALLGGCRLHRD+HLAEQVLKKLI+LEPWNSGNYVLLSNIYSAS RWEEAEKIRS
Sbjct: 484 NAVVWGALLGGCRLHRDSHLAEQVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEKIRS 543
Query: 541 VMKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSEKIYAKLDELGRELKAAGHVPTTEF 600
MKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLS+KIYAKLDELGRELKAAGHVPTTEF
Sbjct: 544 AMKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSDKIYAKLDELGRELKAAGHVPTTEF 603
Query: 601 VLFDIEEEEKEHFLGCHSEKLAVAFGLISSPSNHVIRVVKNLRVCGDCHDAIKLISKITG 660
VLFDIEEEEKEHFLGCHSEKLAVAFGLISSPSNHVIRVVKNLRVCGDCH+AIKLISKITG
Sbjct: 604 VLFDIEEEEKEHFLGCHSEKLAVAFGLISSPSNHVIRVVKNLRVCGDCHEAIKLISKITG 663
Query: 661 REIIIRDTNRFHTFID 677
REIIIRDTNRFHTFI+
Sbjct: 664 REIIIRDTNRFHTFIN 679
BLAST of Sed0027623 vs. ExPASy Swiss-Prot
Match:
Q9SR82 (Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H84 PE=3 SV=1)
HSP 1 Score: 805.1 bits (2078), Expect = 6.3e-232
Identity = 381/685 (55.62%), Postives = 504/685 (73.58%), Query Frame = 0
Query: 1 MTSPSSPVISKALEIEKYLIHGVNSLKQLKHIHARLLRLDLDQHNHLLNILLCSALDLGF 60
+T PS+ SK +I K LI ++ LK IH L+ L L+N+LL L
Sbjct: 4 VTVPSA--TSKVQQI-KTLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQ 63
Query: 61 TNYAKLVFSQPKHPNIFLWNTVIRAFVSKDCFDEAIHVYGSMRTRGFLPNNFTFPFVFKA 120
T Y+ L+FS + PNIFL+N++I FV+ F E + ++ S+R G + FTFP V KA
Sbjct: 64 TKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKA 123
Query: 121 CARKLDVRLGVNIHTLVVKAGFDSDVFVQTSLLSMYAKCAHLESALKVFDDIPNKNVASW 180
C R +LG+++H+LVVK GF+ DV TSLLS+Y+ L A K+FD+IP+++V +W
Sbjct: 124 CTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTW 183
Query: 181 TAIITGYIANGKFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRYISD 240
TA+ +GY +G+ REAID FK+++EMG++PDS+ +V+VLSAC +GD SGEWI +Y+ +
Sbjct: 184 TALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEE 243
Query: 241 SGLGRNVFVATSLLDMYVKCGNMEGANVIFVAMSEKDIVSWSTMIQGYAFNGLPKQALDL 300
+ +N FV T+L+++Y KCG ME A +F +M EKDIV+WSTMIQGYA N PK+ ++L
Sbjct: 244 MEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIEL 303
Query: 301 FFQMQSENFKPDCYTMVGVLSACAKLGALDLGIWASSLMDRHEFLSNPVLGTALIDMYSK 360
F QM EN KPD +++VG LS+CA LGALDLG W SL+DRHEFL+N + ALIDMY+K
Sbjct: 304 FLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAK 363
Query: 361 CGSVARAWEIFQAMEKKDRVVWNAMIVGLSLNGHAKAVFSLFSLVEKHGIQPNENTFIGL 420
CG++AR +E+F+ M++KD V+ NA I GL+ NGH K F++F EK GI P+ +TF+GL
Sbjct: 364 CGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGL 423
Query: 421 LCGCTHGGFVDEGRRYFNSMKRVFSLTPSIEHYGCMVDLLGRAGLLDEALQLINSMPMQP 480
LCGC H G + +G R+FN++ V++L ++EHYGCMVDL GRAG+LD+A +LI MPM+P
Sbjct: 424 LCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRP 483
Query: 481 NAVVWGALLGGCRLHRDTHLAEQVLKKLIDLEPWNSGNYVLLSNIYSASQRWEEAEKIRS 540
NA+VWGALL GCRL +DT LAE VLK+LI LEPWN+GNYV LSNIYS RW+EA ++R
Sbjct: 484 NAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRD 543
Query: 541 VMKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSEKIYAKLDELGRELKAAGHVPTTEF 600
+M ++ ++KI G SWIE++G VHEFL DKSH LS+KIYAKL++LG E++ G VPTTEF
Sbjct: 544 MMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEF 603
Query: 601 VLFDIEEEEKEHFLGCHSEKLAVAFGLISSPSNHVIRVVKNLRVCGDCHDAIKLISKITG 660
V FD+EEEEKE LG HSEKLAVA GLIS+ VIRVVKNLRVCGDCH+ +KLISKIT
Sbjct: 604 VFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITR 663
Query: 661 REIIIRDTNRFHTFIDGSCSCKDYW 686
REI++RD NRFH F +GSCSC DYW
Sbjct: 664 REIVVRDNNRFHCFTNGSCSCNDYW 685
BLAST of Sed0027623 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 600.1 bits (1546), Expect = 3.1e-170
Identity = 301/703 (42.82%), Postives = 434/703 (61.74%), Query Frame = 0
Query: 19 LIHGVNSLKQLKHIHARLLRLDLDQHNHLLNILL-CSALDLGFTN--YAKLVFSQPKHPN 78
L+H +L+ L+ IHA+++++ L N+ L+ L+ L F YA VF + PN
Sbjct: 39 LLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPN 98
Query: 79 IFLWNTVIRAFVSKDCFDEAIHVYGSMRTRGFLPNNFTFPFVFKACARKLDVRLGVNIHT 138
+ +WNT+ R A+ +Y M + G LPN++TFPFV K+CA+ + G IH
Sbjct: 99 LLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHG 158
Query: 139 LVVKAGFDSDVFVQTSLLSM-------------------------------YAKCAHLES 198
V+K G D D++V TSL+SM YA ++E+
Sbjct: 159 HVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIEN 218
Query: 199 ALKVFDDIPNKNVASWTAIITGYIANGKFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQ 258
A K+FD+IP K+V SW A+I+GY G ++EA++ FK +++ +RPD ++V V+SACAQ
Sbjct: 219 AQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQ 278
Query: 259 LGDFTSGEWIDRYISDSGLGRNVFVATSLLDMYVKCGNMEGANVIFVAMSEKDIVSWSTM 318
G G + +I D G G N+ + +L+D+Y KCG +E A +F + KD++SW+T+
Sbjct: 279 SGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTL 338
Query: 319 IQGYAFNGLPKQALDLFFQMQSENFKPDCYTMVGVLSACAKLGALDLGIWASSLMDRH-- 378
I GY L K+AL LF +M P+ TM+ +L ACA LGA+D+G W +D+
Sbjct: 339 IGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLK 398
Query: 379 EFLSNPVLGTALIDMYSKCGSVARAWEIFQAMEKKDRVVWNAMIVGLSLNGHAKAVFSLF 438
+ L T+LIDMY+KCG + A ++F ++ K WNAMI G +++G A A F LF
Sbjct: 399 GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLF 458
Query: 439 SLVEKHGIQPNENTFIGLLCGCTHGGFVDEGRRYFNSMKRVFSLTPSIEHYGCMVDLLGR 498
S + K GIQP++ TF+GLL C+H G +D GR F +M + + +TP +EHYGCM+DLLG
Sbjct: 459 SRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGH 518
Query: 499 AGLLDEALQLINSMPMQPNAVVWGALLGGCRLHRDTHLAEQVLKKLIDLEPWNSGNYVLL 558
+GL EA ++IN M M+P+ V+W +LL C++H + L E + LI +EP N G+YVLL
Sbjct: 519 SGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLL 578
Query: 559 SNIYSASQRWEEAEKIRSVMKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSEKIYAKL 618
SNIY+++ RW E K R+++ ++ ++K+ GCS IEID +VHEF++GDK H + +IY L
Sbjct: 579 SNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGML 638
Query: 619 DELGRELKAAGHVPTTEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISSPSNHVIRVVKNL 678
+E+ L+ AG VP T VL ++EEE KE L HSEKLA+AFGLIS+ + +VKNL
Sbjct: 639 EEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNL 698
Query: 679 RVCGDCHDAIKLISKITGREIIIRDTNRFHTFIDGSCSCKDYW 686
RVC +CH+A KLISKI REII RD RFH F DG CSC DYW
Sbjct: 699 RVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
BLAST of Sed0027623 vs. ExPASy Swiss-Prot
Match:
O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)
HSP 1 Score: 567.4 bits (1461), Expect = 2.2e-160
Identity = 291/720 (40.42%), Postives = 430/720 (59.72%), Query Frame = 0
Query: 2 TSPSSPVISKALEIEKYLIHGVNSLKQLKHIHARLLRLDLDQHNHLLNILLCSALDLGFT 61
++P+ P + LI SL+QLK H ++R + + L A F
Sbjct: 19 SNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFA 78
Query: 62 N--YAKLVFSQPKHPNIFLWNTVIRAFVSKDCFDEAIHVYGSMRTRG-FLPNNFTFPFVF 121
+ YA+ VF + PN F WNT+IRA+ S +I + M + PN +TFPF+
Sbjct: 79 SLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLI 138
Query: 122 KACARKLDVRLGVNIHTLVVKAGFDSDVFVQTSLLSMYAKCAHLESALKVFDDIPNKNVA 181
KA A + LG ++H + VK+ SDVFV SL+ Y C L+SA KVF I K+V
Sbjct: 139 KAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVV 198
Query: 182 SWTAIITGYIANGKFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRYI 241
SW ++I G++ G +A++ FK++ ++ ++V VLSACA++ + G + YI
Sbjct: 199 SWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYI 258
Query: 242 SDSGLGRNVFVATSLLDMYVKCGNMEGANVIFVAMSEKDIVSWSTMIQGYAF-------- 301
++ + N+ +A ++LDMY KCG++E A +F AM EKD V+W+TM+ GYA
Sbjct: 259 EENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAR 318
Query: 302 -----------------------NGLPKQALDLFFQMQ-SENFKPDCYTMVGVLSACAKL 361
NG P +AL +F ++Q +N K + T+V LSACA++
Sbjct: 319 EVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQV 378
Query: 362 GALDLGIWASSLMDRHEFLSNPVLGTALIDMYSKCGSVARAWEIFQAMEKKDRVVWNAMI 421
GAL+LG W S + +H N + +ALI MYSKCG + ++ E+F ++EK+D VW+AMI
Sbjct: 379 GALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMI 438
Query: 422 VGLSLNGHAKAVFSLFSLVEKHGIQPNENTFIGLLCGCTHGGFVDEGRRYFNSMKRVFSL 481
GL+++G +F +++ ++PN TF + C C+H G VDE F+ M+ + +
Sbjct: 439 GGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGI 498
Query: 482 TPSIEHYGCMVDLLGRAGLLDEALQLINSMPMQPNAVVWGALLGGCRLHRDTHLAEQVLK 541
P +HY C+VD+LGR+G L++A++ I +MP+ P+ VWGALLG C++H + +LAE
Sbjct: 499 VPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACT 558
Query: 542 KLIDLEPWNSGNYVLLSNIYSASQRWEEAEKIRSVMKEQRIQKIRGCSWIEIDGIVHEFL 601
+L++LEP N G +VLLSNIY+ +WE ++R M+ ++K GCS IEIDG++HEFL
Sbjct: 559 RLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFL 618
Query: 602 VGDKSHSLSEKIYAKLDELGRELKAAGHVPTTEFVLFDIEEEE-KEHFLGCHSEKLAVAF 661
GD +H +SEK+Y KL E+ +LK+ G+ P VL IEEEE KE L HSEKLA+ +
Sbjct: 619 SGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICY 678
Query: 662 GLISSPSNHVIRVVKNLRVCGDCHDAIKLISKITGREIIIRDTNRFHTFIDGSCSCKDYW 686
GLIS+ + VIRV+KNLRVCGDCH KLIS++ REII+RD RFH F +G CSC D+W
Sbjct: 679 GLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
BLAST of Sed0027623 vs. ExPASy Swiss-Prot
Match:
Q9LTV8 (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H43 PE=2 SV=1)
HSP 1 Score: 567.4 bits (1461), Expect = 2.2e-160
Identity = 275/669 (41.11%), Postives = 409/669 (61.14%), Query Frame = 0
Query: 19 LIHGVNSLKQLKHIHARLLRLDLDQHNHLLNILLCSALDLGFTNYAKLVFSQPKHPNIFL 78
LI QLK IHARLL L L L+ L+ ++ G +A+ VF P IF
Sbjct: 27 LIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFP 86
Query: 79 WNTVIRAFVSKDCFDEAIHVYGSMRTRGFLPNNFTFPFVFKACARKLDVRLGVNIHTLVV 138
WN +IR + + F +A+ +Y +M+ P++FTFP + KAC+ +++G +H V
Sbjct: 87 WNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVF 146
Query: 139 KAGFDSDVFVQTSLLSMYAKCAHLESALKVFD--DIPNKNVASWTAIITGYIANGKFREA 198
+ GFD+DVFVQ L+++YAKC L SA VF+ +P + + SWTAI++ Y NG+ EA
Sbjct: 147 RLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEA 206
Query: 199 IDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRYISDSGLGRNVFVATSLLDM 258
++ F ++ +M ++PD +LV VL+A L D G I + GL + SL M
Sbjct: 207 LEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTM 266
Query: 259 YVKCGNMEGANVIFVAMSEKDIVSWSTMIQGYAFNGLPKQALDLFFQMQSENFKPDCYTM 318
Y KCG + A ++F M +++ W+ MI GYA NG ++A+D+F +M +++ +PD ++
Sbjct: 267 YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISI 326
Query: 319 VGVLSACAKLGALDLGIWASSLMDRHEFLSNPVLGTALIDMYSKCGSVARAWEIFQAMEK 378
+SACA++G+L+ + R ++ + + +ALIDM++KCGSV A +F
Sbjct: 327 TSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLD 386
Query: 379 KDRVVWNAMIVGLSLNGHAKAVFSLFSLVEKHGIQPNENTFIGLLCGCTHGGFVDEGRRY 438
+D VVW+AMIVG L+G A+ SL+ +E+ G+ PN+ TF+GLL C H G V EG +
Sbjct: 387 RDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWF 446
Query: 439 FNSMKRVFSLTPSIEHYGCMVDLLGRAGLLDEALQLINSMPMQPNAVVWGALLGGCRLHR 498
FN M + P +HY C++DLLGRAG LD+A ++I MP+QP VWGALL C+ HR
Sbjct: 447 FNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHR 506
Query: 499 DTHLAEQVLKKLIDLEPWNSGNYVLLSNIYSASQRWEEAEKIRSVMKEQRIQKIRGCSWI 558
L E ++L ++P N+G+YV LSN+Y+A++ W+ ++R MKE+ + K GCSW+
Sbjct: 507 HVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWV 566
Query: 559 EIDGIVHEFLVGDKSHSLSEKIYAKLDELGRELKAAGHVPTTEFVLFDIEEEEKEHFLGC 618
E+ G + F VGDKSH E+I +++ + LK G V + L D+ +EE E L
Sbjct: 567 EVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCS 626
Query: 619 HSEKLAVAFGLISSPSNHVIRVVKNLRVCGDCHDAIKLISKITGREIIIRDTNRFHTFID 678
HSE++A+A+GLIS+P +R+ KNLR C +CH A KLISK+ REI++RDTNRFH F D
Sbjct: 627 HSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKD 686
Query: 679 GSCSCKDYW 686
G CSC DYW
Sbjct: 687 GVCSCGDYW 694
BLAST of Sed0027623 vs. ExPASy Swiss-Prot
Match:
Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)
HSP 1 Score: 537.7 bits (1384), Expect = 1.9e-151
Identity = 266/686 (38.78%), Postives = 420/686 (61.22%), Query Frame = 0
Query: 8 VISKALEIEKYLIHGV----NSLKQL---KHIHARLLRLDLDQHNHLLNILLCSALDLGF 67
++S +E++ Y V +SL+ + + +H +L+ + N + N L+ L
Sbjct: 186 MMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQR 245
Query: 68 TNYAKLVFSQPKHPNIFLWNTVIRAFVSKDCFDEAIHVYGSMRTRGFLPNNFTFPFVFKA 127
+ A+ VF + ++ WN++I +VS ++ + V+ M G + T VF
Sbjct: 246 VDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAG 305
Query: 128 CARKLDVRLGVNIHTLVVKAGFDSDVFVQTSLLSMYAKCAHLESALKVFDDIPNKNVASW 187
CA + LG +H++ VKA F + +LL MY+KC L+SA VF ++ +++V S+
Sbjct: 306 CADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSY 365
Query: 188 TAIITGYIANGKFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRYISD 247
T++I GY G EA+ F+ + E G+ PD +++ VL+ CA+ G+ + +I +
Sbjct: 366 TSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKE 425
Query: 248 SGLGRNVFVATSLLDMYVKCGNMEGANVIFVAMSEKDIVSWSTMIQGYAFNGLPKQALDL 307
+ LG ++FV+ +L+DMY KCG+M+ A ++F M KDI+SW+T+I GY+ N +AL L
Sbjct: 426 NDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSL 485
Query: 308 F-FQMQSENFKPDCYTMVGVLSACAKLGALDLGIWASSLMDRHEFLSNPVLGTALIDMYS 367
F ++ + F PD T+ VL ACA L A D G + R+ + S+ + +L+DMY+
Sbjct: 486 FNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYA 545
Query: 368 KCGSVARAWEIFQAMEKKDRVVWNAMIVGLSLNGHAKAVFSLFSLVEKHGIQPNENTFIG 427
KCG++ A +F + KD V W MI G ++G K +LF+ + + GI+ +E +F+
Sbjct: 546 KCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVS 605
Query: 428 LLCGCTHGGFVDEGRRYFNSMKRVFSLTPSIEHYGCMVDLLGRAGLLDEALQLINSMPMQ 487
LL C+H G VDEG R+FN M+ + P++EHY C+VD+L R G L +A + I +MP+
Sbjct: 606 LLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIP 665
Query: 488 PNAVVWGALLGGCRLHRDTHLAEQVLKKLIDLEPWNSGNYVLLSNIYSASQRWEEAEKIR 547
P+A +WGALL GCR+H D LAE+V +K+ +LEP N+G YVL++NIY+ +++WE+ +++R
Sbjct: 666 PDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLR 725
Query: 548 SVMKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSEKIYAKLDELGRELKAAGHVPTTE 607
+ ++ ++K GCSWIEI G V+ F+ GD S+ +E I A L ++ + G+ P T+
Sbjct: 726 KRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTK 785
Query: 608 FVLFDIEEEEKEHFLGCHSEKLAVAFGLISSPSNHVIRVVKNLRVCGDCHDAIKLISKIT 667
+ L D EE EKE L HSEKLA+A G+ISS +IRV KNLRVCGDCH+ K +SK+T
Sbjct: 786 YALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLT 845
Query: 668 GREIIIRDTNRFHTFIDGSCSCKDYW 686
REI++RD+NRFH F DG CSC+ +W
Sbjct: 846 RREIVLRDSNRFHQFKDGHCSCRGFW 871
BLAST of Sed0027623 vs. ExPASy TrEMBL
Match:
A0A6J1I8T1 (putative pentatricopeptide repeat-containing protein At3g08820 OS=Cucurbita maxima OX=3661 GN=LOC111470216 PE=3 SV=1)
HSP 1 Score: 1269.2 bits (3283), Expect = 0.0e+00
Identity = 614/685 (89.64%), Postives = 644/685 (94.01%), Query Frame = 0
Query: 1 MTSPSSPVISKALEIEKYLIHGVNSLKQLKHIHARLLRLDLDQHNHLLNILLCSALDLGF 60
+T+P+SPV SKALEI+ YL +GVN KQLKHIH RLLRL DQ N+LLN LL LD G
Sbjct: 4 LTNPASPVFSKALEIKNYLANGVNCFKQLKHIHCRLLRLHFDQDNYLLNTLLSCGLDSGC 63
Query: 61 TNYAKLVFSQPKHPNIFLWNTVIRAFVSKDCFDEAIHVYGSMRTRGFLPNNFTFPFVFKA 120
TNY KLVFSQ K PNIFLWNT+IR VSKDCFD+AI VYGSMR GFLPNNFTFPFV KA
Sbjct: 64 TNYTKLVFSQAKEPNIFLWNTMIRGLVSKDCFDDAIDVYGSMRREGFLPNNFTFPFVLKA 123
Query: 121 CARKLDVRLGVNIHTLVVKAGFDSDVFVQTSLLSMYAKCAHLESALKVFDDIPNKNVASW 180
CARKLD+RLGV IHTLVVKAGFD DVFV+TSLLS+YAKC +LE+ALKVFDD+P+KNV SW
Sbjct: 124 CARKLDIRLGVKIHTLVVKAGFDYDVFVKTSLLSLYAKCDNLENALKVFDDMPDKNVVSW 183
Query: 181 TAIITGYIANGKFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRYISD 240
TAIITGYI +G+FREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRYISD
Sbjct: 184 TAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRYISD 243
Query: 241 SGLGRNVFVATSLLDMYVKCGNMEGANVIFVAMSEKDIVSWSTMIQGYAFNGLPKQALDL 300
GL RNVFVATSLLDMYVKCGNME AN+IF AMSEKDIVSWSTMIQGYAFNGLPKQALDL
Sbjct: 244 CGLVRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNGLPKQALDL 303
Query: 301 FFQMQSENFKPDCYTMVGVLSACAKLGALDLGIWASSLMDRHEFLSNPVLGTALIDMYSK 360
FFQMQSEN KPDCY MVGVLSACA+LGALDLGIWASSLMD+HEFLSNPVLGTALIDMYSK
Sbjct: 304 FFQMQSENLKPDCYAMVGVLSACARLGALDLGIWASSLMDQHEFLSNPVLGTALIDMYSK 363
Query: 361 CGSVARAWEIFQAMEKKDRVVWNAMIVGLSLNGHAKAVFSLFSLVEKHGIQPNENTFIGL 420
CGSV RAWEIF++MEKKDRVVWNAMIVGLS+NGHAKAVFSLFSLVEKHGI+P+ENTFIGL
Sbjct: 364 CGSVTRAWEIFRSMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGL 423
Query: 421 LCGCTHGGFVDEGRRYFNSMKRVFSLTPSIEHYGCMVDLLGRAGLLDEALQLINSMPMQP 480
LCGCTHGGFVDEGRRYFNSMKRVFSLTPSIEHYGCMVDLLGRAGLLDEA +LINSMPMQP
Sbjct: 424 LCGCTHGGFVDEGRRYFNSMKRVFSLTPSIEHYGCMVDLLGRAGLLDEAHRLINSMPMQP 483
Query: 481 NAVVWGALLGGCRLHRDTHLAEQVLKKLIDLEPWNSGNYVLLSNIYSASQRWEEAEKIRS 540
NAVVWGALLGGCRLHRD+HLAEQVLKKLI+LEPWNSGNYVLLSNIYSAS RWEEAEKIRS
Sbjct: 484 NAVVWGALLGGCRLHRDSHLAEQVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEKIRS 543
Query: 541 VMKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSEKIYAKLDELGRELKAAGHVPTTEF 600
MKEQRIQKIRGCSWIEI GIVHEFLVGDKSHSLS+KIYAKLDELGRELKA GHVPTTEF
Sbjct: 544 AMKEQRIQKIRGCSWIEIHGIVHEFLVGDKSHSLSDKIYAKLDELGRELKAVGHVPTTEF 603
Query: 601 VLFDIEEEEKEHFLGCHSEKLAVAFGLISSPSNHVIRVVKNLRVCGDCHDAIKLISKITG 660
VLFDIEEEEKEHFLGCHSEKLAVAFGLISSPSNHVIRVVKNLRVCGDCH+AIKLISKITG
Sbjct: 604 VLFDIEEEEKEHFLGCHSEKLAVAFGLISSPSNHVIRVVKNLRVCGDCHEAIKLISKITG 663
Query: 661 REIIIRDTNRFHTFIDGSCSCKDYW 686
REIIIRDTNRFHTFIDGSCSCKDYW
Sbjct: 664 REIIIRDTNRFHTFIDGSCSCKDYW 688
BLAST of Sed0027623 vs. ExPASy TrEMBL
Match:
A0A6J1GIB8 (putative pentatricopeptide repeat-containing protein At3g08820 OS=Cucurbita moschata OX=3662 GN=LOC111454160 PE=3 SV=1)
HSP 1 Score: 1263.4 bits (3268), Expect = 0.0e+00
Identity = 614/685 (89.64%), Postives = 646/685 (94.31%), Query Frame = 0
Query: 1 MTSPSSPVISKALEIEKYLIHGVNSLKQLKHIHARLLRLDLDQHNHLLNILLCSALDLGF 60
+T+P+SPV SKALEI+ YL +GVN KQLKHIH RLLRL LDQ N+LLN LL S LD G
Sbjct: 4 LTNPASPVFSKALEIKNYLANGVNCFKQLKHIHCRLLRLHLDQDNYLLNTLLSSGLDSGC 63
Query: 61 TNYAKLVFSQPKHPNIFLWNTVIRAFVSKDCFDEAIHVYGSMRTRGFLPNNFTFPFVFKA 120
T+Y+KLVFSQ K PNIFLWNT+IR VSKDCFD+AI VYGSMR GFLPNNFTFPFV KA
Sbjct: 64 TDYSKLVFSQAKEPNIFLWNTMIRGLVSKDCFDDAIDVYGSMRREGFLPNNFTFPFVLKA 123
Query: 121 CARKLDVRLGVNIHTLVVKAGFDSDVFVQTSLLSMYAKCAHLESALKVFDDIPNKNVASW 180
CARKLD+RLGV IHTLVVKAGFD DVFV+TSLLS+YAKC +LE+ALKVFDD+P+KNV SW
Sbjct: 124 CARKLDIRLGVKIHTLVVKAGFDYDVFVKTSLLSLYAKCDNLENALKVFDDMPDKNVVSW 183
Query: 181 TAIITGYIANGKFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRYISD 240
TAIITGYI +G+FREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRYISD
Sbjct: 184 TAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRYISD 243
Query: 241 SGLGRNVFVATSLLDMYVKCGNMEGANVIFVAMSEKDIVSWSTMIQGYAFNGLPKQALDL 300
G RNVFVATSLLDMYVKCGNME AN+IF AMSEKDIVSWSTMIQGYAFNGLPKQALDL
Sbjct: 244 CGFVRNVFVATSLLDMYVKCGNMERANLIFNAMSEKDIVSWSTMIQGYAFNGLPKQALDL 303
Query: 301 FFQMQSENFKPDCYTMVGVLSACAKLGALDLGIWASSLMDRHEFLSNPVLGTALIDMYSK 360
FFQMQSEN KPDCY MVGVLSACA+LGALDLGIWASSLMDRHEFLSNPVLGTALIDMYSK
Sbjct: 304 FFQMQSENLKPDCYAMVGVLSACARLGALDLGIWASSLMDRHEFLSNPVLGTALIDMYSK 363
Query: 361 CGSVARAWEIFQAMEKKDRVVWNAMIVGLSLNGHAKAVFSLFSLVEKHGIQPNENTFIGL 420
CGSV RAWEIF++MEKKDRVVWNAMIVGLS+NGHAKAVFSLFSLV KHGI+P+ENTFIGL
Sbjct: 364 CGSVTRAWEIFRSMEKKDRVVWNAMIVGLSMNGHAKAVFSLFSLVGKHGIRPDENTFIGL 423
Query: 421 LCGCTHGGFVDEGRRYFNSMKRVFSLTPSIEHYGCMVDLLGRAGLLDEALQLINSMPMQP 480
LCGCTHGGFVDEGRRYFNSMK+VFSLTPSIEHYGCMVDLLGRAGLLDEA +LINSMPMQP
Sbjct: 424 LCGCTHGGFVDEGRRYFNSMKQVFSLTPSIEHYGCMVDLLGRAGLLDEAHRLINSMPMQP 483
Query: 481 NAVVWGALLGGCRLHRDTHLAEQVLKKLIDLEPWNSGNYVLLSNIYSASQRWEEAEKIRS 540
NAVVWGALLGGCRLHRD+HLAEQVLKKLI+LEPWNSGNYVLLSNIYSAS RWEEAEKIRS
Sbjct: 484 NAVVWGALLGGCRLHRDSHLAEQVLKKLIELEPWNSGNYVLLSNIYSASHRWEEAEKIRS 543
Query: 541 VMKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSEKIYAKLDELGRELKAAGHVPTTEF 600
MKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLS+KIYAKLDELGRELKAAGHVPTTEF
Sbjct: 544 AMKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSDKIYAKLDELGRELKAAGHVPTTEF 603
Query: 601 VLFDIEEEEKEHFLGCHSEKLAVAFGLISSPSNHVIRVVKNLRVCGDCHDAIKLISKITG 660
VLFDIEEEEKEHFLGCHSEKLAVAFGLISS SNHVIRVVKNLRVCGDCH+AIKLISKITG
Sbjct: 604 VLFDIEEEEKEHFLGCHSEKLAVAFGLISS-SNHVIRVVKNLRVCGDCHEAIKLISKITG 663
Query: 661 REIIIRDTNRFHTFIDGSCSCKDYW 686
REIIIRDTNRFHTFIDGSCSCKDYW
Sbjct: 664 REIIIRDTNRFHTFIDGSCSCKDYW 687
BLAST of Sed0027623 vs. ExPASy TrEMBL
Match:
A0A6J1CU24 (putative pentatricopeptide repeat-containing protein At3g08820 OS=Momordica charantia OX=3673 GN=LOC111014228 PE=3 SV=1)
HSP 1 Score: 1244.6 bits (3219), Expect = 0.0e+00
Identity = 598/685 (87.30%), Postives = 636/685 (92.85%), Query Frame = 0
Query: 1 MTSPSSPVISKALEIEKYLIHGVNSLKQLKHIHARLLRLDLDQHNHLLNILLCSALDLGF 60
+T+PSSPV SKALEI+ YL +GV+ K LK +HARLLRLDLDQ N+LLNI+LC L
Sbjct: 4 LTNPSSPVFSKALEIKNYLSNGVHCFKHLKQVHARLLRLDLDQDNYLLNIILCCGLHSNS 63
Query: 61 TNYAKLVFSQPKHPNIFLWNTVIRAFVSKDCFDEAIHVYGSMRTRGFLPNNFTFPFVFKA 120
TNY KLVFSQ K PNIFLWNT+IR VSKDCFD+AI VYGSMR +GFLPNNFTFPFV KA
Sbjct: 64 TNYTKLVFSQAKEPNIFLWNTMIRGLVSKDCFDDAIDVYGSMRRQGFLPNNFTFPFVLKA 123
Query: 121 CARKLDVRLGVNIHTLVVKAGFDSDVFVQTSLLSMYAKCAHLESALKVFDDIPNKNVASW 180
CARK D+RLGV IHTLVVKAGFD DVFV+TSLLS+YAKC +LE+ALKVFDDIP+KNV SW
Sbjct: 124 CARKFDIRLGVKIHTLVVKAGFDYDVFVKTSLLSLYAKCDNLENALKVFDDIPDKNVVSW 183
Query: 181 TAIITGYIANGKFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRYISD 240
TAIITGYI +G+FREAIDAFKRLLEMGLRPDSFSLVKVLSACAQ GDF SGEWIDRYI+D
Sbjct: 184 TAIITGYIGSGQFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQHGDFKSGEWIDRYITD 243
Query: 241 SGLGRNVFVATSLLDMYVKCGNMEGANVIFVAMSEKDIVSWSTMIQGYAFNGLPKQALDL 300
SGLGRNVFVATSLLDMYVKCGNME AN+IF AM EKDIVSWSTMIQGYAFNGLPKQALDL
Sbjct: 244 SGLGRNVFVATSLLDMYVKCGNMERANLIFHAMPEKDIVSWSTMIQGYAFNGLPKQALDL 303
Query: 301 FFQMQSENFKPDCYTMVGVLSACAKLGALDLGIWASSLMDRHEFLSNPVLGTALIDMYSK 360
FFQM S+N KPDCY MVGVLSACA+LGALDLG WAS+LMDRHEFLSNPVLGTALIDMY+K
Sbjct: 304 FFQMHSQNLKPDCYAMVGVLSACARLGALDLGNWASTLMDRHEFLSNPVLGTALIDMYTK 363
Query: 361 CGSVARAWEIFQAMEKKDRVVWNAMIVGLSLNGHAKAVFSLFSLVEKHGIQPNENTFIGL 420
CGSVARAWEIFQAMEKKDRVVWNAM+VGLS+NGHAKAVFSLFSLVEKHGIQP+ENTFIGL
Sbjct: 364 CGSVARAWEIFQAMEKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIQPDENTFIGL 423
Query: 421 LCGCTHGGFVDEGRRYFNSMKRVFSLTPSIEHYGCMVDLLGRAGLLDEALQLINSMPMQP 480
LCGCTHGGFV+EGR+YF+SMKRVFSLTPSIEHYGCMVDLLGRAG L EA QLINSMPM+P
Sbjct: 424 LCGCTHGGFVNEGRQYFDSMKRVFSLTPSIEHYGCMVDLLGRAGFLGEAQQLINSMPMKP 483
Query: 481 NAVVWGALLGGCRLHRDTHLAEQVLKKLIDLEPWNSGNYVLLSNIYSASQRWEEAEKIRS 540
NAVVWGALLGGCRLHRDTHLAEQVL KLI+LEPWNSGNYVLLSNIYSAS RWEEAEKIRS
Sbjct: 484 NAVVWGALLGGCRLHRDTHLAEQVLMKLIELEPWNSGNYVLLSNIYSASHRWEEAEKIRS 543
Query: 541 VMKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSEKIYAKLDELGRELKAAGHVPTTEF 600
MKE RIQKIRGCSWIE+DGIVH+FLVGDKSHS SEKIYAKLDEL RELK AGH+PTTEF
Sbjct: 544 TMKEHRIQKIRGCSWIEVDGIVHQFLVGDKSHSFSEKIYAKLDELSRELKEAGHMPTTEF 603
Query: 601 VLFDIEEEEKEHFLGCHSEKLAVAFGLISSPSNHVIRVVKNLRVCGDCHDAIKLISKITG 660
VLFDIEEEEKEHFLGCHSEKLAVAFGLIS P NH+IRVVKNLRVCGDCH+AIKLISKITG
Sbjct: 604 VLFDIEEEEKEHFLGCHSEKLAVAFGLISFPKNHIIRVVKNLRVCGDCHEAIKLISKITG 663
Query: 661 REIIIRDTNRFHTFIDGSCSCKDYW 686
REIIIRDTNRFHTFIDGSCSCKDYW
Sbjct: 664 REIIIRDTNRFHTFIDGSCSCKDYW 688
BLAST of Sed0027623 vs. ExPASy TrEMBL
Match:
A0A5A7TLY9 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G005630 PE=3 SV=1)
HSP 1 Score: 1229.2 bits (3179), Expect = 0.0e+00
Identity = 588/685 (85.84%), Postives = 638/685 (93.14%), Query Frame = 0
Query: 1 MTSPSSPVISKALEIEKYLIHGVNSLKQLKHIHARLLRLDLDQHNHLLNILLCSALDLGF 60
+T+PSSPV SKAL+I+ YL +GVN KQLKHIHARLLRL L Q N+LLN++LC LD G
Sbjct: 4 LTNPSSPVFSKALDIKNYLSNGVNFFKQLKHIHARLLRLHLHQDNYLLNMILCCGLDFGS 63
Query: 61 TNYAKLVFSQPKHPNIFLWNTVIRAFVSKDCFDEAIHVYGSMRTRGFLPNNFTFPFVFKA 120
T+Y KLVFSQ K PNIFLWNT+IR VSKDCFDEAIH+YGSMR GFLPNNFTFPFV KA
Sbjct: 64 TDYTKLVFSQVKEPNIFLWNTMIRGLVSKDCFDEAIHLYGSMRGGGFLPNNFTFPFVLKA 123
Query: 121 CARKLDVRLGVNIHTLVVKAGFDSDVFVQTSLLSMYAKCAHLESALKVFDDIPNKNVASW 180
CARKLD+RLG+ IHTL+VKAG+D DVFV+TSLLS+Y KC +L+ ALKVFDDIP+KNV SW
Sbjct: 124 CARKLDIRLGLKIHTLLVKAGYDCDVFVKTSLLSLYVKCDNLDDALKVFDDIPDKNVVSW 183
Query: 181 TAIITGYIANGKFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRYISD 240
TAIITGYI++G FREAI AFK+LLEMGL+PDSFSLVKVL+ACA+LGDFTSGEWIDRYISD
Sbjct: 184 TAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDFTSGEWIDRYISD 243
Query: 241 SGLGRNVFVATSLLDMYVKCGNMEGANVIFVAMSEKDIVSWSTMIQGYAFNGLPKQALDL 300
+G+GRNVFVATSLLDMYVKCGN+E AN+IF AM EKD+VSWSTMIQGYAFNGLP+QALDL
Sbjct: 244 NGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDVVSWSTMIQGYAFNGLPQQALDL 303
Query: 301 FFQMQSENFKPDCYTMVGVLSACAKLGALDLGIWASSLMDRHEFLSNPVLGTALIDMYSK 360
FFQMQSEN KPDCYTMVGVLSACA LGALDLGIWASSLMDRHEFLSNPVLGTALIDMYSK
Sbjct: 304 FFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRHEFLSNPVLGTALIDMYSK 363
Query: 361 CGSVARAWEIFQAMEKKDRVVWNAMIVGLSLNGHAKAVFSLFSLVEKHGIQPNENTFIGL 420
CGSV RAWEIF+ MEKKDRVVWNAM+VGLS+NGHAKAVFSLFSLVEKHGI+P+ENTFIGL
Sbjct: 364 CGSVTRAWEIFRTMEKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGL 423
Query: 421 LCGCTHGGFVDEGRRYFNSMKRVFSLTPSIEHYGCMVDLLGRAGLLDEALQLINSMPMQP 480
LCGCTHGGFV+EGR++FN+MKRVFSLTPSIEHYGCMVDLLGRAGLL+EA QLIN MPM+P
Sbjct: 424 LCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINDMPMKP 483
Query: 481 NAVVWGALLGGCRLHRDTHLAEQVLKKLIDLEPWNSGNYVLLSNIYSASQRWEEAEKIRS 540
NAVVWGALLGGC+LH+DTHLAEQVLKKLI+LEPWNSGNYVLLSNIYSA+ RWEEAEKIR
Sbjct: 484 NAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVLLSNIYSANHRWEEAEKIRL 543
Query: 541 VMKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSEKIYAKLDELGRELKAAGHVPTTEF 600
MKEQ+IQKIR CSWIEI+GIVHEFLVGD SHSLSEKIYAKLDELGRELKA GHVPTTEF
Sbjct: 544 TMKEQQIQKIRACSWIEINGIVHEFLVGDNSHSLSEKIYAKLDELGRELKAVGHVPTTEF 603
Query: 601 VLFDIEEEEKEHFLGCHSEKLAVAFGLISSPSNHVIRVVKNLRVCGDCHDAIKLISKITG 660
VLFDIEEEEKEHFLG HSEKLAVAFGLI+SP N VIRVVKNLRVCGDCHDAIKLISKIT
Sbjct: 604 VLFDIEEEEKEHFLGYHSEKLAVAFGLIASPPNCVIRVVKNLRVCGDCHDAIKLISKITK 663
Query: 661 REIIIRDTNRFHTFIDGSCSCKDYW 686
REIIIRDTNRFHTFIDGSCSCKDYW
Sbjct: 664 REIIIRDTNRFHTFIDGSCSCKDYW 688
BLAST of Sed0027623 vs. ExPASy TrEMBL
Match:
A0A5D3DMV5 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00430 PE=3 SV=1)
HSP 1 Score: 1226.8 bits (3173), Expect = 0.0e+00
Identity = 586/685 (85.55%), Postives = 638/685 (93.14%), Query Frame = 0
Query: 1 MTSPSSPVISKALEIEKYLIHGVNSLKQLKHIHARLLRLDLDQHNHLLNILLCSALDLGF 60
+T+PSSPV SKAL+I+ YL +GVN KQLKHIHARLLRL L Q N+LLN++LC LD G
Sbjct: 4 LTNPSSPVFSKALDIKNYLSNGVNFFKQLKHIHARLLRLHLHQDNYLLNMILCCGLDFGS 63
Query: 61 TNYAKLVFSQPKHPNIFLWNTVIRAFVSKDCFDEAIHVYGSMRTRGFLPNNFTFPFVFKA 120
T+Y KLVFSQ K PNIFLWNT+IR VSKDCFD+AIH+YGSMR GFLPNNFTFPFV KA
Sbjct: 64 TDYTKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTFPFVLKA 123
Query: 121 CARKLDVRLGVNIHTLVVKAGFDSDVFVQTSLLSMYAKCAHLESALKVFDDIPNKNVASW 180
CARKLD+RLG+ IHTL+VKAG+D DVFV+TSLLS+Y KC +L+ ALKVFDDIP+KNV SW
Sbjct: 124 CARKLDIRLGLKIHTLLVKAGYDCDVFVKTSLLSLYVKCDNLDDALKVFDDIPDKNVVSW 183
Query: 181 TAIITGYIANGKFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRYISD 240
TAIITGYI++G FREAI AF++LLEMGL+PDSFSLVKVL+ACA+LGDFTSGEWIDRYISD
Sbjct: 184 TAIITGYISSGHFREAIGAFRKLLEMGLKPDSFSLVKVLAACARLGDFTSGEWIDRYISD 243
Query: 241 SGLGRNVFVATSLLDMYVKCGNMEGANVIFVAMSEKDIVSWSTMIQGYAFNGLPKQALDL 300
+G+GRNVFVATSLLDMYVKCGN+E AN+IF AM EKD+VSWSTMIQGYAFNGLP+QALDL
Sbjct: 244 NGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDVVSWSTMIQGYAFNGLPQQALDL 303
Query: 301 FFQMQSENFKPDCYTMVGVLSACAKLGALDLGIWASSLMDRHEFLSNPVLGTALIDMYSK 360
FFQMQSEN KPDCYTMVGVLSACA LGALDLGIWASSLMDRHEFLSNPVLGTALIDMYSK
Sbjct: 304 FFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRHEFLSNPVLGTALIDMYSK 363
Query: 361 CGSVARAWEIFQAMEKKDRVVWNAMIVGLSLNGHAKAVFSLFSLVEKHGIQPNENTFIGL 420
CGSV RAWEIF+ MEKKDRVVWNAM+VGLS+NGHAKAVFSLFSLVEKHGI+P+ENTFIGL
Sbjct: 364 CGSVTRAWEIFRTMEKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGL 423
Query: 421 LCGCTHGGFVDEGRRYFNSMKRVFSLTPSIEHYGCMVDLLGRAGLLDEALQLINSMPMQP 480
LCGCTHGGFV+EGR++FN+MKRVFSLTPSIEHYGCMVDLLGRAGLL+EA QLIN MPM+P
Sbjct: 424 LCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINDMPMKP 483
Query: 481 NAVVWGALLGGCRLHRDTHLAEQVLKKLIDLEPWNSGNYVLLSNIYSASQRWEEAEKIRS 540
NAVVWGALLGGC+LH+DTHLAEQVLKKLI+LEPWNSGNYVLLSNIYSA+ RWEEAEKIR
Sbjct: 484 NAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVLLSNIYSANHRWEEAEKIRL 543
Query: 541 VMKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSEKIYAKLDELGRELKAAGHVPTTEF 600
MKEQ+IQKIR CSWIEI+GIVHEFLVGD SHSLSEKIYAKLDELGRELKA GHVPTTEF
Sbjct: 544 TMKEQQIQKIRACSWIEINGIVHEFLVGDNSHSLSEKIYAKLDELGRELKAVGHVPTTEF 603
Query: 601 VLFDIEEEEKEHFLGCHSEKLAVAFGLISSPSNHVIRVVKNLRVCGDCHDAIKLISKITG 660
VLFDIEEEEKEHFLG HSEKLAVAFGLI+SP N VIRVVKNLRVCGDCHDAIKLISKIT
Sbjct: 604 VLFDIEEEEKEHFLGYHSEKLAVAFGLIASPPNCVIRVVKNLRVCGDCHDAIKLISKITK 663
Query: 661 REIIIRDTNRFHTFIDGSCSCKDYW 686
REIIIRDTNRFHTFIDGSCSCKDYW
Sbjct: 664 REIIIRDTNRFHTFIDGSCSCKDYW 688
BLAST of Sed0027623 vs. TAIR 10
Match:
AT3G08820.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 805.1 bits (2078), Expect = 4.5e-233
Identity = 381/685 (55.62%), Postives = 504/685 (73.58%), Query Frame = 0
Query: 1 MTSPSSPVISKALEIEKYLIHGVNSLKQLKHIHARLLRLDLDQHNHLLNILLCSALDLGF 60
+T PS+ SK +I K LI ++ LK IH L+ L L+N+LL L
Sbjct: 4 VTVPSA--TSKVQQI-KTLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQ 63
Query: 61 TNYAKLVFSQPKHPNIFLWNTVIRAFVSKDCFDEAIHVYGSMRTRGFLPNNFTFPFVFKA 120
T Y+ L+FS + PNIFL+N++I FV+ F E + ++ S+R G + FTFP V KA
Sbjct: 64 TKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKA 123
Query: 121 CARKLDVRLGVNIHTLVVKAGFDSDVFVQTSLLSMYAKCAHLESALKVFDDIPNKNVASW 180
C R +LG+++H+LVVK GF+ DV TSLLS+Y+ L A K+FD+IP+++V +W
Sbjct: 124 CTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTW 183
Query: 181 TAIITGYIANGKFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRYISD 240
TA+ +GY +G+ REAID FK+++EMG++PDS+ +V+VLSAC +GD SGEWI +Y+ +
Sbjct: 184 TALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEE 243
Query: 241 SGLGRNVFVATSLLDMYVKCGNMEGANVIFVAMSEKDIVSWSTMIQGYAFNGLPKQALDL 300
+ +N FV T+L+++Y KCG ME A +F +M EKDIV+WSTMIQGYA N PK+ ++L
Sbjct: 244 MEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIEL 303
Query: 301 FFQMQSENFKPDCYTMVGVLSACAKLGALDLGIWASSLMDRHEFLSNPVLGTALIDMYSK 360
F QM EN KPD +++VG LS+CA LGALDLG W SL+DRHEFL+N + ALIDMY+K
Sbjct: 304 FLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAK 363
Query: 361 CGSVARAWEIFQAMEKKDRVVWNAMIVGLSLNGHAKAVFSLFSLVEKHGIQPNENTFIGL 420
CG++AR +E+F+ M++KD V+ NA I GL+ NGH K F++F EK GI P+ +TF+GL
Sbjct: 364 CGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGL 423
Query: 421 LCGCTHGGFVDEGRRYFNSMKRVFSLTPSIEHYGCMVDLLGRAGLLDEALQLINSMPMQP 480
LCGC H G + +G R+FN++ V++L ++EHYGCMVDL GRAG+LD+A +LI MPM+P
Sbjct: 424 LCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRP 483
Query: 481 NAVVWGALLGGCRLHRDTHLAEQVLKKLIDLEPWNSGNYVLLSNIYSASQRWEEAEKIRS 540
NA+VWGALL GCRL +DT LAE VLK+LI LEPWN+GNYV LSNIYS RW+EA ++R
Sbjct: 484 NAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRD 543
Query: 541 VMKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSEKIYAKLDELGRELKAAGHVPTTEF 600
+M ++ ++KI G SWIE++G VHEFL DKSH LS+KIYAKL++LG E++ G VPTTEF
Sbjct: 544 MMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEF 603
Query: 601 VLFDIEEEEKEHFLGCHSEKLAVAFGLISSPSNHVIRVVKNLRVCGDCHDAIKLISKITG 660
V FD+EEEEKE LG HSEKLAVA GLIS+ VIRVVKNLRVCGDCH+ +KLISKIT
Sbjct: 604 VFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITR 663
Query: 661 REIIIRDTNRFHTFIDGSCSCKDYW 686
REI++RD NRFH F +GSCSC DYW
Sbjct: 664 REIVVRDNNRFHCFTNGSCSCNDYW 685
BLAST of Sed0027623 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 600.1 bits (1546), Expect = 2.2e-171
Identity = 301/703 (42.82%), Postives = 434/703 (61.74%), Query Frame = 0
Query: 19 LIHGVNSLKQLKHIHARLLRLDLDQHNHLLNILL-CSALDLGFTN--YAKLVFSQPKHPN 78
L+H +L+ L+ IHA+++++ L N+ L+ L+ L F YA VF + PN
Sbjct: 39 LLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPN 98
Query: 79 IFLWNTVIRAFVSKDCFDEAIHVYGSMRTRGFLPNNFTFPFVFKACARKLDVRLGVNIHT 138
+ +WNT+ R A+ +Y M + G LPN++TFPFV K+CA+ + G IH
Sbjct: 99 LLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHG 158
Query: 139 LVVKAGFDSDVFVQTSLLSM-------------------------------YAKCAHLES 198
V+K G D D++V TSL+SM YA ++E+
Sbjct: 159 HVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIEN 218
Query: 199 ALKVFDDIPNKNVASWTAIITGYIANGKFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQ 258
A K+FD+IP K+V SW A+I+GY G ++EA++ FK +++ +RPD ++V V+SACAQ
Sbjct: 219 AQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQ 278
Query: 259 LGDFTSGEWIDRYISDSGLGRNVFVATSLLDMYVKCGNMEGANVIFVAMSEKDIVSWSTM 318
G G + +I D G G N+ + +L+D+Y KCG +E A +F + KD++SW+T+
Sbjct: 279 SGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTL 338
Query: 319 IQGYAFNGLPKQALDLFFQMQSENFKPDCYTMVGVLSACAKLGALDLGIWASSLMDRH-- 378
I GY L K+AL LF +M P+ TM+ +L ACA LGA+D+G W +D+
Sbjct: 339 IGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLK 398
Query: 379 EFLSNPVLGTALIDMYSKCGSVARAWEIFQAMEKKDRVVWNAMIVGLSLNGHAKAVFSLF 438
+ L T+LIDMY+KCG + A ++F ++ K WNAMI G +++G A A F LF
Sbjct: 399 GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLF 458
Query: 439 SLVEKHGIQPNENTFIGLLCGCTHGGFVDEGRRYFNSMKRVFSLTPSIEHYGCMVDLLGR 498
S + K GIQP++ TF+GLL C+H G +D GR F +M + + +TP +EHYGCM+DLLG
Sbjct: 459 SRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGH 518
Query: 499 AGLLDEALQLINSMPMQPNAVVWGALLGGCRLHRDTHLAEQVLKKLIDLEPWNSGNYVLL 558
+GL EA ++IN M M+P+ V+W +LL C++H + L E + LI +EP N G+YVLL
Sbjct: 519 SGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLL 578
Query: 559 SNIYSASQRWEEAEKIRSVMKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSEKIYAKL 618
SNIY+++ RW E K R+++ ++ ++K+ GCS IEID +VHEF++GDK H + +IY L
Sbjct: 579 SNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGML 638
Query: 619 DELGRELKAAGHVPTTEFVLFDIEEEEKEHFLGCHSEKLAVAFGLISSPSNHVIRVVKNL 678
+E+ L+ AG VP T VL ++EEE KE L HSEKLA+AFGLIS+ + +VKNL
Sbjct: 639 EEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNL 698
Query: 679 RVCGDCHDAIKLISKITGREIIIRDTNRFHTFIDGSCSCKDYW 686
RVC +CH+A KLISKI REII RD RFH F DG CSC DYW
Sbjct: 699 RVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
BLAST of Sed0027623 vs. TAIR 10
Match:
AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 567.4 bits (1461), Expect = 1.6e-161
Identity = 291/720 (40.42%), Postives = 430/720 (59.72%), Query Frame = 0
Query: 2 TSPSSPVISKALEIEKYLIHGVNSLKQLKHIHARLLRLDLDQHNHLLNILLCSALDLGFT 61
++P+ P + LI SL+QLK H ++R + + L A F
Sbjct: 19 SNPNQPTTNNERSRHISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFA 78
Query: 62 N--YAKLVFSQPKHPNIFLWNTVIRAFVSKDCFDEAIHVYGSMRTRG-FLPNNFTFPFVF 121
+ YA+ VF + PN F WNT+IRA+ S +I + M + PN +TFPF+
Sbjct: 79 SLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLI 138
Query: 122 KACARKLDVRLGVNIHTLVVKAGFDSDVFVQTSLLSMYAKCAHLESALKVFDDIPNKNVA 181
KA A + LG ++H + VK+ SDVFV SL+ Y C L+SA KVF I K+V
Sbjct: 139 KAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVV 198
Query: 182 SWTAIITGYIANGKFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRYI 241
SW ++I G++ G +A++ FK++ ++ ++V VLSACA++ + G + YI
Sbjct: 199 SWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYI 258
Query: 242 SDSGLGRNVFVATSLLDMYVKCGNMEGANVIFVAMSEKDIVSWSTMIQGYAF-------- 301
++ + N+ +A ++LDMY KCG++E A +F AM EKD V+W+TM+ GYA
Sbjct: 259 EENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAR 318
Query: 302 -----------------------NGLPKQALDLFFQMQ-SENFKPDCYTMVGVLSACAKL 361
NG P +AL +F ++Q +N K + T+V LSACA++
Sbjct: 319 EVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQV 378
Query: 362 GALDLGIWASSLMDRHEFLSNPVLGTALIDMYSKCGSVARAWEIFQAMEKKDRVVWNAMI 421
GAL+LG W S + +H N + +ALI MYSKCG + ++ E+F ++EK+D VW+AMI
Sbjct: 379 GALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMI 438
Query: 422 VGLSLNGHAKAVFSLFSLVEKHGIQPNENTFIGLLCGCTHGGFVDEGRRYFNSMKRVFSL 481
GL+++G +F +++ ++PN TF + C C+H G VDE F+ M+ + +
Sbjct: 439 GGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGI 498
Query: 482 TPSIEHYGCMVDLLGRAGLLDEALQLINSMPMQPNAVVWGALLGGCRLHRDTHLAEQVLK 541
P +HY C+VD+LGR+G L++A++ I +MP+ P+ VWGALLG C++H + +LAE
Sbjct: 499 VPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACT 558
Query: 542 KLIDLEPWNSGNYVLLSNIYSASQRWEEAEKIRSVMKEQRIQKIRGCSWIEIDGIVHEFL 601
+L++LEP N G +VLLSNIY+ +WE ++R M+ ++K GCS IEIDG++HEFL
Sbjct: 559 RLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFL 618
Query: 602 VGDKSHSLSEKIYAKLDELGRELKAAGHVPTTEFVLFDIEEEE-KEHFLGCHSEKLAVAF 661
GD +H +SEK+Y KL E+ +LK+ G+ P VL IEEEE KE L HSEKLA+ +
Sbjct: 619 SGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICY 678
Query: 662 GLISSPSNHVIRVVKNLRVCGDCHDAIKLISKITGREIIIRDTNRFHTFIDGSCSCKDYW 686
GLIS+ + VIRV+KNLRVCGDCH KLIS++ REII+RD RFH F +G CSC D+W
Sbjct: 679 GLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
BLAST of Sed0027623 vs. TAIR 10
Match:
AT3G12770.1 (mitochondrial editing factor 22 )
HSP 1 Score: 567.4 bits (1461), Expect = 1.6e-161
Identity = 275/669 (41.11%), Postives = 409/669 (61.14%), Query Frame = 0
Query: 19 LIHGVNSLKQLKHIHARLLRLDLDQHNHLLNILLCSALDLGFTNYAKLVFSQPKHPNIFL 78
LI QLK IHARLL L L L+ L+ ++ G +A+ VF P IF
Sbjct: 27 LIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFP 86
Query: 79 WNTVIRAFVSKDCFDEAIHVYGSMRTRGFLPNNFTFPFVFKACARKLDVRLGVNIHTLVV 138
WN +IR + + F +A+ +Y +M+ P++FTFP + KAC+ +++G +H V
Sbjct: 87 WNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVF 146
Query: 139 KAGFDSDVFVQTSLLSMYAKCAHLESALKVFD--DIPNKNVASWTAIITGYIANGKFREA 198
+ GFD+DVFVQ L+++YAKC L SA VF+ +P + + SWTAI++ Y NG+ EA
Sbjct: 147 RLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEA 206
Query: 199 IDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRYISDSGLGRNVFVATSLLDM 258
++ F ++ +M ++PD +LV VL+A L D G I + GL + SL M
Sbjct: 207 LEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTM 266
Query: 259 YVKCGNMEGANVIFVAMSEKDIVSWSTMIQGYAFNGLPKQALDLFFQMQSENFKPDCYTM 318
Y KCG + A ++F M +++ W+ MI GYA NG ++A+D+F +M +++ +PD ++
Sbjct: 267 YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISI 326
Query: 319 VGVLSACAKLGALDLGIWASSLMDRHEFLSNPVLGTALIDMYSKCGSVARAWEIFQAMEK 378
+SACA++G+L+ + R ++ + + +ALIDM++KCGSV A +F
Sbjct: 327 TSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLD 386
Query: 379 KDRVVWNAMIVGLSLNGHAKAVFSLFSLVEKHGIQPNENTFIGLLCGCTHGGFVDEGRRY 438
+D VVW+AMIVG L+G A+ SL+ +E+ G+ PN+ TF+GLL C H G V EG +
Sbjct: 387 RDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWF 446
Query: 439 FNSMKRVFSLTPSIEHYGCMVDLLGRAGLLDEALQLINSMPMQPNAVVWGALLGGCRLHR 498
FN M + P +HY C++DLLGRAG LD+A ++I MP+QP VWGALL C+ HR
Sbjct: 447 FNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHR 506
Query: 499 DTHLAEQVLKKLIDLEPWNSGNYVLLSNIYSASQRWEEAEKIRSVMKEQRIQKIRGCSWI 558
L E ++L ++P N+G+YV LSN+Y+A++ W+ ++R MKE+ + K GCSW+
Sbjct: 507 HVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWV 566
Query: 559 EIDGIVHEFLVGDKSHSLSEKIYAKLDELGRELKAAGHVPTTEFVLFDIEEEEKEHFLGC 618
E+ G + F VGDKSH E+I +++ + LK G V + L D+ +EE E L
Sbjct: 567 EVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCS 626
Query: 619 HSEKLAVAFGLISSPSNHVIRVVKNLRVCGDCHDAIKLISKITGREIIIRDTNRFHTFID 678
HSE++A+A+GLIS+P +R+ KNLR C +CH A KLISK+ REI++RDTNRFH F D
Sbjct: 627 HSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKD 686
Query: 679 GSCSCKDYW 686
G CSC DYW
Sbjct: 687 GVCSCGDYW 694
BLAST of Sed0027623 vs. TAIR 10
Match:
AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 537.7 bits (1384), Expect = 1.3e-152
Identity = 266/686 (38.78%), Postives = 420/686 (61.22%), Query Frame = 0
Query: 8 VISKALEIEKYLIHGV----NSLKQL---KHIHARLLRLDLDQHNHLLNILLCSALDLGF 67
++S +E++ Y V +SL+ + + +H +L+ + N + N L+ L
Sbjct: 186 MMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQR 245
Query: 68 TNYAKLVFSQPKHPNIFLWNTVIRAFVSKDCFDEAIHVYGSMRTRGFLPNNFTFPFVFKA 127
+ A+ VF + ++ WN++I +VS ++ + V+ M G + T VF
Sbjct: 246 VDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAG 305
Query: 128 CARKLDVRLGVNIHTLVVKAGFDSDVFVQTSLLSMYAKCAHLESALKVFDDIPNKNVASW 187
CA + LG +H++ VKA F + +LL MY+KC L+SA VF ++ +++V S+
Sbjct: 306 CADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSY 365
Query: 188 TAIITGYIANGKFREAIDAFKRLLEMGLRPDSFSLVKVLSACAQLGDFTSGEWIDRYISD 247
T++I GY G EA+ F+ + E G+ PD +++ VL+ CA+ G+ + +I +
Sbjct: 366 TSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKE 425
Query: 248 SGLGRNVFVATSLLDMYVKCGNMEGANVIFVAMSEKDIVSWSTMIQGYAFNGLPKQALDL 307
+ LG ++FV+ +L+DMY KCG+M+ A ++F M KDI+SW+T+I GY+ N +AL L
Sbjct: 426 NDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSL 485
Query: 308 F-FQMQSENFKPDCYTMVGVLSACAKLGALDLGIWASSLMDRHEFLSNPVLGTALIDMYS 367
F ++ + F PD T+ VL ACA L A D G + R+ + S+ + +L+DMY+
Sbjct: 486 FNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYA 545
Query: 368 KCGSVARAWEIFQAMEKKDRVVWNAMIVGLSLNGHAKAVFSLFSLVEKHGIQPNENTFIG 427
KCG++ A +F + KD V W MI G ++G K +LF+ + + GI+ +E +F+
Sbjct: 546 KCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVS 605
Query: 428 LLCGCTHGGFVDEGRRYFNSMKRVFSLTPSIEHYGCMVDLLGRAGLLDEALQLINSMPMQ 487
LL C+H G VDEG R+FN M+ + P++EHY C+VD+L R G L +A + I +MP+
Sbjct: 606 LLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIP 665
Query: 488 PNAVVWGALLGGCRLHRDTHLAEQVLKKLIDLEPWNSGNYVLLSNIYSASQRWEEAEKIR 547
P+A +WGALL GCR+H D LAE+V +K+ +LEP N+G YVL++NIY+ +++WE+ +++R
Sbjct: 666 PDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLR 725
Query: 548 SVMKEQRIQKIRGCSWIEIDGIVHEFLVGDKSHSLSEKIYAKLDELGRELKAAGHVPTTE 607
+ ++ ++K GCSWIEI G V+ F+ GD S+ +E I A L ++ + G+ P T+
Sbjct: 726 KRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTK 785
Query: 608 FVLFDIEEEEKEHFLGCHSEKLAVAFGLISSPSNHVIRVVKNLRVCGDCHDAIKLISKIT 667
+ L D EE EKE L HSEKLA+A G+ISS +IRV KNLRVCGDCH+ K +SK+T
Sbjct: 786 YALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLT 845
Query: 668 GREIIIRDTNRFHTFIDGSCSCKDYW 686
REI++RD+NRFH F DG CSC+ +W
Sbjct: 846 RREIVLRDSNRFHQFKDGHCSCRGFW 871
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG6596322.1 | 0.0e+00 | 90.07 | putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyros... | [more] |
XP_022971519.1 | 0.0e+00 | 89.64 | putative pentatricopeptide repeat-containing protein At3g08820 [Cucurbita maxima... | [more] |
XP_023538778.1 | 0.0e+00 | 89.34 | putative pentatricopeptide repeat-containing protein At3g08820 [Cucurbita pepo s... | [more] |
XP_022951275.1 | 0.0e+00 | 89.64 | putative pentatricopeptide repeat-containing protein At3g08820 [Cucurbita moscha... | [more] |
KAG7027873.1 | 0.0e+00 | 90.09 | putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyros... | [more] |
Match Name | E-value | Identity | Description | |
Q9SR82 | 6.3e-232 | 55.62 | Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis th... | [more] |
Q9LN01 | 3.1e-170 | 42.82 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
O82380 | 2.2e-160 | 40.42 | Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... | [more] |
Q9LTV8 | 2.2e-160 | 41.11 | Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX... | [more] |
Q9SN39 | 1.9e-151 | 38.78 | Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1I8T1 | 0.0e+00 | 89.64 | putative pentatricopeptide repeat-containing protein At3g08820 OS=Cucurbita maxi... | [more] |
A0A6J1GIB8 | 0.0e+00 | 89.64 | putative pentatricopeptide repeat-containing protein At3g08820 OS=Cucurbita mosc... | [more] |
A0A6J1CU24 | 0.0e+00 | 87.30 | putative pentatricopeptide repeat-containing protein At3g08820 OS=Momordica char... | [more] |
A0A5A7TLY9 | 0.0e+00 | 85.84 | Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa... | [more] |
A0A5D3DMV5 | 0.0e+00 | 85.55 | Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa... | [more] |
Match Name | E-value | Identity | Description | |
AT3G08820.1 | 4.5e-233 | 55.62 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G08070.1 | 2.2e-171 | 42.82 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G29760.1 | 1.6e-161 | 40.42 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G12770.1 | 1.6e-161 | 41.11 | mitochondrial editing factor 22 | [more] |
AT4G18750.1 | 1.3e-152 | 38.78 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |