Sed0027610 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTGTTGTCTCCAACTTTGGAAAATATTTGGGGCTCCCAGCCATTGCTCGAGAAGTAAGAGGAATGATTTTTACTATATTAAGGAGAAAGTGCAAAAAGTTGTGGAAAGGTGGAAAGGGAGGTTTTTTCGGTGGCTGGCAAAAAAGTTCTGTTTGAAGTTATAGCTCAGTCCATCCCCACTTATGCCATGTCTAGTGTTAGATTTCCTAAATCTCTTTGCCATGATTTATCTAAAATTGTTGCCCGAATTTGGTGGAGAGCAACCAAATCTAGAAATCGCATTCGCTATGCTAAATAGGACAAGATATGTATGGCTAAGGATAGAGGACGTCTTGGATTCCAAAATTTAGAAGGTTTTAACCAGGCTCTTCTTGCAAAGCAAGTTTGGCGCCTTCTTATCAATCCTGTCTTTAACTAGGAGAGTGTTTTTATCCTTGATGTAAAAGGGAAAGCTAATGCCTCTTTTGTTTGGAGAAGCCTTCTGTGGGGAAGAGACTTGTTGAAATGTGGTTTACGTAGGAGAATTGGAAATGGAGAAAGCACTCCTTTCTTTAACTTGACCTTGGTCCTTTACTCTCACTTCTCCTAATATTTCAGGTGCTGAAGAGGAGGTAGTAAAGGACTATATTCCAGAAGAGGGATGTTGGAATATGGATAAACTGTCCTCTGTTCTTCTTTTGGAGGATGATGTTAATTGTGTGTCTTCTATCCCTATCTGTAAAACTCAGTTGGATGACAGATGGATATGGCACTTTACTAAATATGGAGAATTCTCAGTTAAAAGGGCTCACAAGGTGTTTATGGATAAAAGATTTGAGGAGCAGAGCTCTAATAGTGAGATGGGAAGAGCTAGTTGGAATTCCCTTTGGAAGTTAAATATTCCTTCTAAGGTAAAAAAATTTCTTTGGAGGCTGTGCAAAGGTTACATTCCCACAAATTATACTCTTTATCAAAGGCATATTAATATAGCCCCTTGGTGTGTTCAGTGTGGAAACAACATCGAATCTATTAGCCATACCTTTTTCGGTTGCAAGCTTGCCAAGAAGATTTGGAATTCGTTGAATATTGGAGTTAATCCTCTATGGGCTATTTGGAATGACAGGATCAAAGTTAATGCAGGAGAAGCAGAGTTAACTGGATTTGGAGCTACTGAATGA ATGAGTGTTGTCTCCAACTTTGGAAAATATTTGGGGCTCCCAGCCATTGCTCGAGAAGTAAGAGGAATGATTTTTACTATATTAAGGAGAAAGTGCAAAAAGTTGTGGAAAGGTGGAAAGGGAGGTGCTGAAGAGGAGGTAGTAAAGGACTATATTCCAGAAGAGGGATGTTGGAATATGGATAAACTGTCCTCTGTTCTTCTTTTGGAGGATGATGTTAATTGTGTGTCTTCTATCCCTATCTGTAAAACTCAGTTGGATGACAGATGGATATGGCACTTTACTAAATATGGAGAATTCTCAGTTAAAAGGGCTCACAAGTGTGGAAACAACATCGAATCTATTAGCCATACCTTTTTCGGTTGCAAGCTTGCCAAGAAGATTTGGAATTCGTTGAATATTGGAGTTAATCCTCTATGGGCTATTTGGAATGACAGGATCAAAGTTAATGCAGGAGAAGCAGAGTTAACTGGATTTGGAGCTACTGAATGA ATGAGTGTTGTCTCCAACTTTGGAAAATATTTGGGGCTCCCAGCCATTGCTCGAGAAGTAAGAGGAATGATTTTTACTATATTAAGGAGAAAGTGCAAAAAGTTGTGGAAAGGTGGAAAGGGAGGTGCTGAAGAGGAGGTAGTAAAGGACTATATTCCAGAAGAGGGATGTTGGAATATGGATAAACTGTCCTCTGTTCTTCTTTTGGAGGATGATGTTAATTGTGTGTCTTCTATCCCTATCTGTAAAACTCAGTTGGATGACAGATGGATATGGCACTTTACTAAATATGGAGAATTCTCAGTTAAAAGGGCTCACAAGTGTGGAAACAACATCGAATCTATTAGCCATACCTTTTTCGGTTGCAAGCTTGCCAAGAAGATTTGGAATTCGTTGAATATTGGAGTTAATCCTCTATGGGCTATTTGGAATGACAGGATCAAAGTTAATGCAGGAGAAGCAGAGTTAACTGGATTTGGAGCTACTGAATGA MSVVSNFGKYLGLPAIAREVRGMIFTILRRKCKKLWKGGKGGAEEEVVKDYIPEEGCWNMDKLSSVLLLEDDVNCVSSIPICKTQLDDRWIWHFTKYGEFSVKRAHKCGNNIESISHTFFGCKLAKKIWNSLNIGVNPLWAIWNDRIKVNAGEAELTGFGATE Homology
BLAST of Sed0027610 vs. NCBI nr
Match: XP_021801569.1 (uncharacterized protein LOC110745747 isoform X1 [Prunus avium]) HSP 1 Score: 64.7 bits (156), Expect = 8.5e-07 Identity = 32/95 (33.68%), Postives = 49/95 (51.58%), Query Frame = 0
BLAST of Sed0027610 vs. NCBI nr
Match: OMO77499.1 (putative ribonuclease H protein [Corchorus olitorius]) HSP 1 Score: 61.6 bits (148), Expect = 7.2e-06 Identity = 31/98 (31.63%), Postives = 46/98 (46.94%), Query Frame = 0
BLAST of Sed0027610 vs. NCBI nr
Match: OMO91045.1 (Endonuclease/exonuclease/phosphatase [Corchorus capsularis]) HSP 1 Score: 59.3 bits (142), Expect = 3.6e-05 Identity = 39/120 (32.50%), Postives = 59/120 (49.17%), Query Frame = 0
BLAST of Sed0027610 vs. NCBI nr
Match: KAF4404898.1 (hypothetical protein G4B88_006284 [Cannabis sativa]) HSP 1 Score: 58.9 bits (141), Expect = 4.6e-05 Identity = 42/150 (28.00%), Postives = 62/150 (41.33%), Query Frame = 0
BLAST of Sed0027610 vs. NCBI nr
Match: KAF4363267.1 (hypothetical protein G4B88_016078 [Cannabis sativa]) HSP 1 Score: 58.9 bits (141), Expect = 4.6e-05 Identity = 40/120 (33.33%), Postives = 59/120 (49.17%), Query Frame = 0
BLAST of Sed0027610 vs. ExPASy TrEMBL
Match: A0A6P5RF81 (uncharacterized protein LOC110745747 isoform X1 OS=Prunus avium OX=42229 GN=LOC110745747 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 4.1e-07 Identity = 32/95 (33.68%), Postives = 49/95 (51.58%), Query Frame = 0
BLAST of Sed0027610 vs. ExPASy TrEMBL
Match: A0A803NGI9 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 2.0e-06 Identity = 35/132 (26.52%), Postives = 54/132 (40.91%), Query Frame = 0
BLAST of Sed0027610 vs. ExPASy TrEMBL
Match: A0A1R3I4N6 (Putative ribonuclease H protein OS=Corchorus olitorius OX=93759 GN=COLO4_25140 PE=4 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 3.5e-06 Identity = 31/98 (31.63%), Postives = 46/98 (46.94%), Query Frame = 0
BLAST of Sed0027610 vs. ExPASy TrEMBL
Match: A0A1R3J874 (Endonuclease/exonuclease/phosphatase OS=Corchorus capsularis OX=210143 GN=CCACVL1_07229 PE=4 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 1.7e-05 Identity = 39/120 (32.50%), Postives = 59/120 (49.17%), Query Frame = 0
BLAST of Sed0027610 vs. ExPASy TrEMBL
Match: A0A7J6EXV6 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_016078 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 2.2e-05 Identity = 40/120 (33.33%), Postives = 59/120 (49.17%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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