Sed0027560 (gene) Chayote v1

Overview


Name	Sed0027560
Type	gene
Organism	Sechium edule (Chayote v1)
Description	ctenidin-3-like
Location	LG10: 1965836 .. 1966818 (-)
RNA-Seq Expression	Sed0027560
Synteny	Sed0027560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCTCATTTTCAAATTTTCTATCCATATCACATTATCGAAAACTTTTCTAATGTGAAAAGAAAGAAGAGAAAGAGAAAAACGAAGCCGACCTCGAAAGCCCATTAATGAGGAGCCAACTGCCCCTCCATTACCATCTTTCCATTAATGCATTTCCTGCCCCTCCACTTTCTTCAACACCCACTTTCACTTCTCTTATTTCTACTTTTTCCCCCCCACTTTTCTCTCCTAATTACCCAAAAACGCGTCTAAAATGAATCGCTCAACGCTACTTTCCACTTTCCTCGTCGCCGTTCTCCTCACCCTCGCCGCCGGCGGAGGCCCCGGCTACGACGGCATGTTCGGACCCGGCTCCGGATTCGGCGACATACCCGGCTTCGGAAAGGGCTGGGACAAGGGCATCATCGGCGGCGGATACGGCGGCGGCTACGGCGGCCCCAAAGGCGGCTACGGGAAGGGCGGAATCATAAGAAACACTGTGCTCTGTAAAGAGAAAGGCCCTTGTTACAATAAGAAGGTGACGTGTCCGGCCAAGTGCTTCTCCTCTTACAGCCGATCCGGCAAGGGCTACGGCGGCGGCGGCGGCGGCGGTGGCTGCACCATCGACTGCACTAAGAAATGTATCGGTTATTGTTAGAGAGGGGGCGGCGGCGGCTTCTGAGTGTTTTTGTTTAACACGGCTGCCGGAAAAAAAAAACGTATCTATAATTAATTAGTATGCTTGTTTTAATGGGTTAAAAAAAAGGGGCTATGTACCGCAGTTTTACTAGACTGTTATATATAAATTATTAGAAATATAATTACTATTAAGTGGTGTTGTGTAATGTTGTATCAGTGTTTGAATTATGGTTTTCTTGGACTCTTTTGGAATACAGCTTTTTTAATTATGAATATGTAGTGAGTATTATAATAATTTCCACGTGTTTGATTGGTTTTGAATTATTATGCATCTATCTATAATTTGAGGGTTTTGTTTGAGCTGGT

mRNA sequence

CTCCTCATTTTCAAATTTTCTATCCATATCACATTATCGAAAACTTTTCTAATGTGAAAAGAAAGAAGAGAAAGAGAAAAACGAAGCCGACCTCGAAAGCCCATTAATGAGGAGCCAACTGCCCCTCCATTACCATCTTTCCATTAATGCATTTCCTGCCCCTCCACTTTCTTCAACACCCACTTTCACTTCTCTTATTTCTACTTTTTCCCCCCCACTTTTCTCTCCTAATTACCCAAAAACGCGTCTAAAATGAATCGCTCAACGCTACTTTCCACTTTCCTCGTCGCCGTTCTCCTCACCCTCGCCGCCGGCGGAGGCCCCGGCTACGACGGCATGTTCGGACCCGGCTCCGGATTCGGCGACATACCCGGCTTCGGAAAGGGCTGGGACAAGGGCATCATCGGCGGCGGATACGGCGGCGGCTACGGCGGCCCCAAAGGCGGCTACGGGAAGGGCGGAATCATAAGAAACACTGTGCTCTGTAAAGAGAAAGGCCCTTGTTACAATAAGAAGGTGACGTGTCCGGCCAAGTGCTTCTCCTCTTACAGCCGATCCGGCAAGGGCTACGGCGGCGGCGGCGGCGGCGGTGGCTGCACCATCGACTGCACTAAGAAATGTATCGGTTATTGTTAGAGAGGGGGCGGCGGCGGCTTCTGAGTGTTTTTGTTTAACACGGCTGCCGGAAAAAAAAAACGTATCTATAATTAATTAGTATGCTTGTTTTAATGGGTTAAAAAAAAGGGGCTATGTACCGCAGTTTTACTAGACTGTTATATATAAATTATTAGAAATATAATTACTATTAAGTGGTGTTGTGTAATGTTGTATCAGTGTTTGAATTATGGTTTTCTTGGACTCTTTTGGAATACAGCTTTTTTAATTATGAATATGTAGTGAGTATTATAATAATTTCCACGTGTTTGATTGGTTTTGAATTATTATGCATCTATCTATAATTTGAGGGTTTTGTTTGAGCTGGT

Coding sequence (CDS)

ATGAATCGCTCAACGCTACTTTCCACTTTCCTCGTCGCCGTTCTCCTCACCCTCGCCGCCGGCGGAGGCCCCGGCTACGACGGCATGTTCGGACCCGGCTCCGGATTCGGCGACATACCCGGCTTCGGAAAGGGCTGGGACAAGGGCATCATCGGCGGCGGATACGGCGGCGGCTACGGCGGCCCCAAAGGCGGCTACGGGAAGGGCGGAATCATAAGAAACACTGTGCTCTGTAAAGAGAAAGGCCCTTGTTACAATAAGAAGGTGACGTGTCCGGCCAAGTGCTTCTCCTCTTACAGCCGATCCGGCAAGGGCTACGGCGGCGGCGGCGGCGGCGGTGGCTGCACCATCGACTGCACTAAGAAATGTATCGGTTATTGTTAG

Protein sequence

MNRSTLLSTFLVAVLLTLAAGGGPGYDGMFGPGSGFGDIPGFGKGWDKGIIGGGYGGGYGGPKGGYGKGGIIRNTVLCKEKGPCYNKKVTCPAKCFSSYSRSGKGYGGGGGGGGCTIDCTKKCIGYC

Homology

[Close]

BLAST of Sed0027560 vs. NCBI nr
Match: XP_022926656.1 (neuropeptide-like protein 31 [Cucurbita moschata] >KAG6594623.1 hypothetical protein SDJN03_11176, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026592.1 hypothetical protein SDJN02_10594, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 223.8 bits (569), Expect = 8.5e-55
Identity = 112/135 (82.96%), Postives = 117/135 (86.67%), Query Frame = 0


Query: 1   MNRSTLLSTFLVAVLL--------TLAAGGGPGYDGMFGPGSGFGDIPGFGKGWDKGIIG 60
           MNR   +ST LVAVLL        T    GG G+DGMFGPG+GF DIPGFGKGWDKGIIG
Sbjct: 1   MNRHMAISTLLVAVLLLSPAFSLATARNSGGGGFDGMFGPGNGFDDIPGFGKGWDKGIIG 60

Query: 61  GGYGGGYGGPKGGYGKGGIIRNTVLCKEKGPCYNKKVTCPAKCFSSYSRSGKGYGGGGGG 120
           GGYGGGYGGPKGGYGKGGIIRNTV+CKEKGPCYNKKVTCPAKCFSSYSRSGKG+GGGGGG
Sbjct: 61  GGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCFSSYSRSGKGFGGGGGG 120

Query: 121 GGCTIDCTKKCIGYC 128
           GGCTIDCTKKCIGYC
Sbjct: 121 GGCTIDCTKKCIGYC 135

[Close]

BLAST of Sed0027560 vs. NCBI nr
Match: XP_023517828.1 (cold shock domain-containing protein 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 221.9 bits (564), Expect = 3.2e-54
Identity = 111/135 (82.22%), Postives = 116/135 (85.93%), Query Frame = 0


Query: 1   MNRSTLLSTFLVAVLL--------TLAAGGGPGYDGMFGPGSGFGDIPGFGKGWDKGIIG 60
           MNR   +S  LVAVLL        T    GG G+DGMFGPG+GF DIPGFGKGWDKGIIG
Sbjct: 39  MNRHMAISALLVAVLLLSPPFSLATARNSGGGGFDGMFGPGNGFDDIPGFGKGWDKGIIG 98

Query: 61  GGYGGGYGGPKGGYGKGGIIRNTVLCKEKGPCYNKKVTCPAKCFSSYSRSGKGYGGGGGG 120
           GGYGGGYGGPKGGYGKGGIIRNTV+CKEKGPCYNKKVTCPAKCFSSYSRSGKG+GGGGGG
Sbjct: 99  GGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCFSSYSRSGKGFGGGGGG 158

Query: 121 GGCTIDCTKKCIGYC 128
           GGCTIDCTKKCIGYC
Sbjct: 159 GGCTIDCTKKCIGYC 173

[Close]

BLAST of Sed0027560 vs. NCBI nr
Match: XP_023003427.1 (eggshell protein-like [Cucurbita maxima])

HSP 1 Score: 216.5 bits (550), Expect = 1.4e-52
Identity = 108/133 (81.20%), Postives = 114/133 (85.71%), Query Frame = 0


Query: 1   MNRSTLLSTFLVAVLLT------LAAGGGPGYDGMFGPGSGFGDIPGFGKGWDKGIIGGG 60
           MNR   +ST LV  LL+       A   G G+DGMF PG+GF DIPGFGKGWDKGIIGGG
Sbjct: 1   MNRHMAISTLLVVFLLSPAFSFATARNSGGGFDGMFEPGNGFDDIPGFGKGWDKGIIGGG 60

Query: 61  YGGGYGGPKGGYGKGGIIRNTVLCKEKGPCYNKKVTCPAKCFSSYSRSGKGYGGGGGGGG 120
           YGGGYGGPKGGYGKGGIIRNTV+CKEKGPCYNKKVTCPAKCFSSYSRSGKG+GGGGGGGG
Sbjct: 61  YGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCFSSYSRSGKGFGGGGGGGG 120

Query: 121 CTIDCTKKCIGYC 128
           CTIDCTKKCIGYC
Sbjct: 121 CTIDCTKKCIGYC 133

[Close]

BLAST of Sed0027560 vs. NCBI nr
Match: XP_004134728.1 (ctenidin-3 [Cucumis sativus] >KGN49190.1 hypothetical protein Csa_003176 [Cucumis sativus])

HSP 1 Score: 211.5 bits (537), Expect = 4.4e-51
Identity = 106/133 (79.70%), Postives = 113/133 (84.96%), Query Frame = 0


Query: 1   MNRSTLLSTFLVAVLL------TLAAGGGPGYDGMFGPGSGFGDIPGFGKGWDKGIIGGG 60
           MN    +  FL+A+LL         A    G+DGMFGPG+GFGDIPGFGKGWDKGIIGGG
Sbjct: 1   MNLFIPIFPFLIAILLLSPSISLATARKDGGFDGMFGPGNGFGDIPGFGKGWDKGIIGGG 60

Query: 61  YGGGYGGPKGGYGKGGIIRNTVLCKEKGPCYNKKVTCPAKCFSSYSRSGKGYGGGGGGGG 120
           YGGGYGGPKGGYGKGGIIRN+V+CK KGPCYNKKVTCPAKCFSSYSRSGKGYGGGGGGGG
Sbjct: 61  YGGGYGGPKGGYGKGGIIRNSVVCKVKGPCYNKKVTCPAKCFSSYSRSGKGYGGGGGGGG 120

Query: 121 CTIDCTKKCIGYC 128
           CTIDCTKKCIGYC
Sbjct: 121 CTIDCTKKCIGYC 133

[Close]

BLAST of Sed0027560 vs. NCBI nr
Match: XP_023543509.1 (ATP-dependent RNA helicase A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 202.2 bits (513), Expect = 2.6e-48
Identity = 102/127 (80.31%), Postives = 109/127 (85.83%), Query Frame = 0


Query: 1   MNRSTLLSTFLVAVLLTLAAGGGPGYDGMFGPGSGFGDIPGFGKGWDKGIIGGGYGGGYG 60
           MN S L+S  L+AVLL   +       GMF PG GF DIPGF KGWDKGI+GGGYGGGYG
Sbjct: 1   MNPSLLISALLLAVLLLSPSASLAA--GMFEPGGGFDDIPGFRKGWDKGIVGGGYGGGYG 60

Query: 61  GPKGGYGKGGIIRNTVLCKEKGPCYNKKVTCPAKCFSSYSRSGKGYGGGGGGGGCTIDCT 120
           GPKGGYGKGGIIRNTV+CKEKGPCYNKKVTCPAKCFSSYSRSGKG+GGGGGGGGCTIDC+
Sbjct: 61  GPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCFSSYSRSGKGFGGGGGGGGCTIDCS 120

Query: 121 KKCIGYC 128
           KKCIGYC
Sbjct: 121 KKCIGYC 125

[Close]

BLAST of Sed0027560 vs. ExPASy TrEMBL
Match: A0A6J1EFI3 (neuropeptide-like protein 31 OS=Cucurbita moschata OX=3662 GN=LOC111433724 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 4.1e-55
Identity = 112/135 (82.96%), Postives = 117/135 (86.67%), Query Frame = 0


Query: 1   MNRSTLLSTFLVAVLL--------TLAAGGGPGYDGMFGPGSGFGDIPGFGKGWDKGIIG 60
           MNR   +ST LVAVLL        T    GG G+DGMFGPG+GF DIPGFGKGWDKGIIG
Sbjct: 1   MNRHMAISTLLVAVLLLSPAFSLATARNSGGGGFDGMFGPGNGFDDIPGFGKGWDKGIIG 60

Query: 61  GGYGGGYGGPKGGYGKGGIIRNTVLCKEKGPCYNKKVTCPAKCFSSYSRSGKGYGGGGGG 120
           GGYGGGYGGPKGGYGKGGIIRNTV+CKEKGPCYNKKVTCPAKCFSSYSRSGKG+GGGGGG
Sbjct: 61  GGYGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCFSSYSRSGKGFGGGGGG 120

Query: 121 GGCTIDCTKKCIGYC 128
           GGCTIDCTKKCIGYC
Sbjct: 121 GGCTIDCTKKCIGYC 135

[Close]

BLAST of Sed0027560 vs. ExPASy TrEMBL
Match: A0A6J1KMH9 (eggshell protein-like OS=Cucurbita maxima OX=3661 GN=LOC111497041 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 6.6e-53
Identity = 108/133 (81.20%), Postives = 114/133 (85.71%), Query Frame = 0


Query: 1   MNRSTLLSTFLVAVLLT------LAAGGGPGYDGMFGPGSGFGDIPGFGKGWDKGIIGGG 60
           MNR   +ST LV  LL+       A   G G+DGMF PG+GF DIPGFGKGWDKGIIGGG
Sbjct: 1   MNRHMAISTLLVVFLLSPAFSFATARNSGGGFDGMFEPGNGFDDIPGFGKGWDKGIIGGG 60

Query: 61  YGGGYGGPKGGYGKGGIIRNTVLCKEKGPCYNKKVTCPAKCFSSYSRSGKGYGGGGGGGG 120
           YGGGYGGPKGGYGKGGIIRNTV+CKEKGPCYNKKVTCPAKCFSSYSRSGKG+GGGGGGGG
Sbjct: 61  YGGGYGGPKGGYGKGGIIRNTVVCKEKGPCYNKKVTCPAKCFSSYSRSGKGFGGGGGGGG 120

Query: 121 CTIDCTKKCIGYC 128
           CTIDCTKKCIGYC
Sbjct: 121 CTIDCTKKCIGYC 133

[Close]

BLAST of Sed0027560 vs. ExPASy TrEMBL
Match: A0A0A0KHJ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G516980 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 2.1e-51
Identity = 106/133 (79.70%), Postives = 113/133 (84.96%), Query Frame = 0


Query: 1   MNRSTLLSTFLVAVLL------TLAAGGGPGYDGMFGPGSGFGDIPGFGKGWDKGIIGGG 60
           MN    +  FL+A+LL         A    G+DGMFGPG+GFGDIPGFGKGWDKGIIGGG
Sbjct: 1   MNLFIPIFPFLIAILLLSPSISLATARKDGGFDGMFGPGNGFGDIPGFGKGWDKGIIGGG 60

Query: 61  YGGGYGGPKGGYGKGGIIRNTVLCKEKGPCYNKKVTCPAKCFSSYSRSGKGYGGGGGGGG 120
           YGGGYGGPKGGYGKGGIIRN+V+CK KGPCYNKKVTCPAKCFSSYSRSGKGYGGGGGGGG
Sbjct: 61  YGGGYGGPKGGYGKGGIIRNSVVCKVKGPCYNKKVTCPAKCFSSYSRSGKGYGGGGGGGG 120

Query: 121 CTIDCTKKCIGYC 128
           CTIDCTKKCIGYC
Sbjct: 121 CTIDCTKKCIGYC 133

[Close]

BLAST of Sed0027560 vs. ExPASy TrEMBL
Match: A0A5A7UGS4 (Ctenidin-3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G003320 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 3.7e-48
Identity = 102/133 (76.69%), Postives = 111/133 (83.46%), Query Frame = 0


Query: 1   MNRSTLLSTFLVAVL-----LTLAAG-GGPGYDGMFGPGSGFGDIPGFGKGWDKGIIGGG 60
           MN    +  FL+A+L     L+LA      G+ GMFGPG+GF DIPGFGKGWDKGI+GGG
Sbjct: 1   MNFFIPIFPFLIAILLLSPSLSLATSRKDGGFGGMFGPGNGFDDIPGFGKGWDKGIVGGG 60

Query: 61  YGGGYGGPKGGYGKGGIIRNTVLCKEKGPCYNKKVTCPAKCFSSYSRSGKGYGGGGGGGG 120
           YGGGYGGPKGGYGKGGIIR  V+CKEKGPC+NKKVTCPAKCFSSYSRSGKGYGGGGGGGG
Sbjct: 61  YGGGYGGPKGGYGKGGIIRKPVVCKEKGPCFNKKVTCPAKCFSSYSRSGKGYGGGGGGGG 120

Query: 121 CTIDCTKKCIGYC 128
           CTIDC KKCIGYC
Sbjct: 121 CTIDCAKKCIGYC 133

[Close]

BLAST of Sed0027560 vs. ExPASy TrEMBL
Match: A0A1S3AZW7 (ctenidin-3-like OS=Cucumis melo OX=3656 GN=LOC103484551 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 3.7e-48
Identity = 102/133 (76.69%), Postives = 111/133 (83.46%), Query Frame = 0


Query: 1   MNRSTLLSTFLVAVL-----LTLAAG-GGPGYDGMFGPGSGFGDIPGFGKGWDKGIIGGG 60
           MN    +  FL+A+L     L+LA      G+ GMFGPG+GF DIPGFGKGWDKGI+GGG
Sbjct: 1   MNFFIPIFPFLIAILLLSPSLSLATSRKDGGFGGMFGPGNGFDDIPGFGKGWDKGIVGGG 60

Query: 61  YGGGYGGPKGGYGKGGIIRNTVLCKEKGPCYNKKVTCPAKCFSSYSRSGKGYGGGGGGGG 120
           YGGGYGGPKGGYGKGGIIR  V+CKEKGPC+NKKVTCPAKCFSSYSRSGKGYGGGGGGGG
Sbjct: 61  YGGGYGGPKGGYGKGGIIRKPVVCKEKGPCFNKKVTCPAKCFSSYSRSGKGYGGGGGGGG 120

Query: 121 CTIDCTKKCIGYC 128
           CTIDC KKCIGYC
Sbjct: 121 CTIDCAKKCIGYC 133

[Close]

BLAST of Sed0027560 vs. TAIR 10
Match: AT4G21620.1 (glycine-rich protein )

HSP 1 Score: 153.3 bits (386), Expect = 1.3e-37
Identity = 83/130 (63.85%), Postives = 100/130 (76.92%), Query Frame = 0


Query: 3   RSTLLSTFLVAVLL--TLAAGGGPGYDGM-FG--PGSGFGDIPGFGKGWDKGIIGGGYGG 62
           +S LL++ L+ +L+  T +A    G DG+ FG  PGSGF  IPGFG G+    +GGGYGG
Sbjct: 4   KSILLASLLIIILVSATESARQKSGNDGLGFGGVPGSGF--IPGFGNGFPGTGVGGGYGG 63

Query: 63  GYGGPKGGYGKGGIIRNTVLCKEKGPCYNKKVTCPAKCFSSYSRSGKGYGGGGGGGGCTI 122
           G+GGP GG+GKGG++R TV CKEKGPC  KK+ CPAKCF S+SRSGKGYGGGGGGGGCT+
Sbjct: 64  GFGGPSGGFGKGGVVRPTVTCKEKGPCNGKKLRCPAKCFKSFSRSGKGYGGGGGGGGCTM 123

Query: 123 DCTKKCIGYC 128
           DC KKCI YC
Sbjct: 124 DCKKKCIAYC 131

[Close]

BLAST of Sed0027560 vs. TAIR 10
Match: AT4G21620.2 (glycine-rich protein )

HSP 1 Score: 116.3 bits (290), Expect = 1.8e-26
Identity = 50/64 (78.12%), Postives = 56/64 (87.50%), Query Frame = 0


Query: 64  GGYGKGGIIRNTVLCKEKGPCYNKKVTCPAKCFSSYSRSGKGYGGGGGGGGCTIDCTKKC 123
           GG+GKGG++R TV CKEKGPC  KK+ CPAKCF S+SRSGKGYGGGGGGGGCT+DC KKC
Sbjct: 35  GGFGKGGVVRPTVTCKEKGPCNGKKLRCPAKCFKSFSRSGKGYGGGGGGGGCTMDCKKKC 94

Query: 124 IGYC 128
           I YC
Sbjct: 95  IAYC 98

[Close]

BLAST of Sed0027560 vs. TAIR 10
Match: AT1G61255.1 (BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G21620.2); Has 58 Blast hits to 58 proteins in 12 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 95.9 bits (237), Expect = 2.5e-20
Identity = 58/100 (58.00%), Postives = 64/100 (64.00%), Query Frame = 0


Query: 30  FGPGSGFGDIPGFGKGWDKGII--GGGYGGGYGGPKGGYGKGGIIRNTVLCKEKGPCYNK 89
           +  G G G  PG       G I  G G GG Y    GGY KG  +R TV+C+EKG CY K
Sbjct: 47  YNKGYGSGGYPGLTTEPATGFILPGSGPGGSYSELSGGYSKGRGVRLTVMCEEKGHCYMK 106

Query: 90  KVTCPAKCFSSYSRSGKGYGGGGGGGGCTIDCTKKCIGYC 128
           K+TCPAKCF S SR GKGY  GGGGGGCTIDC KKC+ YC
Sbjct: 107 KLTCPAKCFKSLSRKGKGY--GGGGGGCTIDC-KKCVAYC 143

The following BLAST results are available for this feature:

BLAST of Sed0027560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022926656.1	8.5e-55	82.96	neuropeptide-like protein 31 [Cucurbita moschata] >KAG6594623.1 hypothetical pro...	[more]
XP_023517828.1	3.2e-54	82.22	cold shock domain-containing protein 4-like [Cucurbita pepo subsp. pepo]	[more]
XP_023003427.1	1.4e-52	81.20	eggshell protein-like [Cucurbita maxima]	[more]
XP_004134728.1	4.4e-51	79.70	ctenidin-3 [Cucumis sativus] >KGN49190.1 hypothetical protein Csa_003176 [Cucumi...	[more]
XP_023543509.1	2.6e-48	80.31	ATP-dependent RNA helicase A [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0027560 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0027560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EFI3	4.1e-55	82.96	neuropeptide-like protein 31 OS=Cucurbita moschata OX=3662 GN=LOC111433724 PE=4 ...	[more]
A0A6J1KMH9	6.6e-53	81.20	eggshell protein-like OS=Cucurbita maxima OX=3661 GN=LOC111497041 PE=4 SV=1	[more]
A0A0A0KHJ2	2.1e-51	79.70	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G516980 PE=4 SV=1	[more]
A0A5A7UGS4	3.7e-48	76.69	Ctenidin-3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G0033...	[more]
A0A1S3AZW7	3.7e-48	76.69	ctenidin-3-like OS=Cucumis melo OX=3656 GN=LOC103484551 PE=4 SV=1	[more]

BLAST of Sed0027560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G21620.1	1.3e-37	63.85	glycine-rich protein	[more]
AT4G21620.2	1.8e-26	78.13	glycine-rich protein	[more]
AT1G61255.1	2.5e-20	58.00	BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G21620...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34789	EXPRESSED PROTEIN	coord: 21..127

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0027560.1	Sed0027560.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046855	inositol phosphate dephosphorylation
biological_process	GO:0007218	neuropeptide signaling pathway
biological_process	GO:0046854	phosphatidylinositol phosphate biosynthetic process
molecular_function	GO:0004386	helicase activity