Sed0027533 (gene) Chayote v1

Overview
NameSed0027533
Typegene
OrganismSechium edule (Chayote v1)
DescriptionPentatricopeptide repeat-containing protein
LocationLG06: 40598510 .. 40600397 (+)
RNA-Seq ExpressionSed0027533
SyntenySed0027533
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTGTGTGTGGAAAATGCTTCTACCAATCCCACCAAATCCAAACTCCATTCCTATTCAAATCAACCACCAGACTCATCTTCTTCAATTGCTTAGCGACTGTACCGATTTCTCAAAGCTCAAGCAAATCCACGCTCAGGCAATTCGCACACTCTCCCCCCACAAATCCTCTCTGTTCATCTTTACCCGAATCCTCTCTGTTTCGTCTTCGACCGATTTCGATTATGCCCGTCGTGTTTTTCATCAAATTCATCCCCCAAATTCGTTCATGTGGAACACCCTCATCGCCGCCTGTGCGCGGAGCTTCGACCGGAAAGAGCAGGCGATTGAGCTTTTCTGCAGAATGTTAGAACAGGGCTTGGCTGAACCAGATAAGCATACTTTCCCTTTTCTTCTCAAGGCTTGTGCTTACTTATTTGCGTTATCTGAAGGGAGGCAGGCTCATGGTTATGTTGTAAAACTTGGGTTGGATTCGGATGTTTATGTTGGTAATAGTTTGATTCATTTTTATGCTTCTTGTGGGTGTTTGAGTTTAGCATTGAAGGTGTTCGATAAAATGCCCCATAGAAGTTTGGTTTCCTGGAATGTGATGATTGAGGGTTATGTCCAATGTGGGCTTTTTGAGAATGCTCTGAAACTGTTTGATGAAATGCAGACTGCTTTTGAGCCTGATGGGTATACCATTCAGAGCGTAATTGGCGCTTGTGCGGGTATCGGTGCTTTGTCTTTGGGAATGTGGGCTCATGCTTATGTGTTGAGGAAGGCCGATGGCGCTATGGCTCGTGATGTGTTGATCAACTCCTCGCTTGTGGATATGTACAGCAAGTGTGGTTCGTTGAGAATGGCTCAGCAAGTATTTGAGACAATGCCTAAACATGACTTGAATTCGTGGAATTCAATGATTCTTGCACTTGCCATGCATGGACAGGCCGTCGCGGCATTGCAGTGTTTCTCTCGGTTGGTTGAGATTGGGCAGTTTCGACCCAACTCTGTTACGTTCGTTGGTGTTCTTAGTGCATGTAACCATAGAGGCATGGTTGCTGAAGGTCGAAAGTATTTTGATATGATGATTAACGAATATAAGATCGAACCCCGGTTGGAGCACTATGGATGCCTTGTTGATCTCCTATGTCGCTCTGGTTTCTTTGATGAAGCTTTAGAGTTGGTGACAGATATGAAAATAAAACCAGATGCAGTGATATGGAGAACTCTTCTTGATGCTTGCTACAAGCAGAATGCTGGTGTTGAGCTGAGCGATGAAGTGGCATTGCAGATTCTTCAATCTGAAACAACAGCTTCGAGCGGTGTTTATGTGCTGTTGTCGAGAGTCTATGCTTCAGCTCGCCAGTGGAACAACGTTGGGCTTATAAGGAAGGCAATGACCGAGAAGGGCGTGACGAAAGAGGCCGGCTGCAGTTTGATAGAAATAGATGGTATTAGCCATGAGTTTTTTGCAGGAGACACATCTCACCCGCATATCAAAAAGATATACGAAGTCATTGATTTGATTGAGGAAAAACTAGAGAAGGACGGTTATTCACCTGACTATTCACAGGCAACCATGGTAGACGAACCCGATAATGTCAAACGACAGTCTCTTAGATCACACAGTGAGAGACTTGCCATTGCTTTTGGGTTACTAAATTTGAAACCCGGGATGCCCATACGTATATTTAAGAATCTCCGGGTGTGCAACGATTGCCATCAGGTAACAAAGTCGATTTCTCGAATTTTTAATGTAGAGATTATCACGAGAGATCGTAATAGATTTCACCATTTTAAGAATGGAACGTGTTCCTGCATGGATTTCTGGTGATTTCGTTGTAGAACAGCCAAAAAAACTTATTCATTTGTATAAAAAGCATGGGTGGAAACTGCTGGGAAATGGAA

mRNA sequence

CTTGTGTGTGGAAAATGCTTCTACCAATCCCACCAAATCCAAACTCCATTCCTATTCAAATCAACCACCAGACTCATCTTCTTCAATTGCTTAGCGACTGTACCGATTTCTCAAAGCTCAAGCAAATCCACGCTCAGGCAATTCGCACACTCTCCCCCCACAAATCCTCTCTGTTCATCTTTACCCGAATCCTCTCTGTTTCGTCTTCGACCGATTTCGATTATGCCCGTCGTGTTTTTCATCAAATTCATCCCCCAAATTCGTTCATGTGGAACACCCTCATCGCCGCCTGTGCGCGGAGCTTCGACCGGAAAGAGCAGGCGATTGAGCTTTTCTGCAGAATGTTAGAACAGGGCTTGGCTGAACCAGATAAGCATACTTTCCCTTTTCTTCTCAAGGCTTGTGCTTACTTATTTGCGTTATCTGAAGGGAGGCAGGCTCATGGTTATGTTGTAAAACTTGGGTTGGATTCGGATGTTTATGTTGGTAATAGTTTGATTCATTTTTATGCTTCTTGTGGGTGTTTGAGTTTAGCATTGAAGGTGTTCGATAAAATGCCCCATAGAAGTTTGGTTTCCTGGAATGTGATGATTGAGGGTTATGTCCAATGTGGGCTTTTTGAGAATGCTCTGAAACTGTTTGATGAAATGCAGACTGCTTTTGAGCCTGATGGGTATACCATTCAGAGCGTAATTGGCGCTTGTGCGGGTATCGGTGCTTTGTCTTTGGGAATGTGGGCTCATGCTTATGTGTTGAGGAAGGCCGATGGCGCTATGGCTCGTGATGTGTTGATCAACTCCTCGCTTGTGGATATGTACAGCAAGTGTGGTTCGTTGAGAATGGCTCAGCAAGTATTTGAGACAATGCCTAAACATGACTTGAATTCGTGGAATTCAATGATTCTTGCACTTGCCATGCATGGACAGGCCGTCGCGGCATTGCAGTGTTTCTCTCGGTTGGTTGAGATTGGGCAGTTTCGACCCAACTCTGTTACGTTCGTTGGTGTTCTTAGTGCATGTAACCATAGAGGCATGGTTGCTGAAGGTCGAAAGTATTTTGATATGATGATTAACGAATATAAGATCGAACCCCGGTTGGAGCACTATGGATGCCTTGTTGATCTCCTATGTCGCTCTGGTTTCTTTGATGAAGCTTTAGAGTTGGTGACAGATATGAAAATAAAACCAGATGCAGTGATATGGAGAACTCTTCTTGATGCTTGCTACAAGCAGAATGCTGGTGTTGAGCTGAGCGATGAAGTGGCATTGCAGATTCTTCAATCTGAAACAACAGCTTCGAGCGGTGTTTATGTGCTGTTGTCGAGAGTCTATGCTTCAGCTCGCCAGTGGAACAACGTTGGGCTTATAAGGAAGGCAATGACCGAGAAGGGCGTGACGAAAGAGGCCGGCTGCAGTTTGATAGAAATAGATGGTATTAGCCATGAGTTTTTTGCAGGAGACACATCTCACCCGCATATCAAAAAGATATACGAAGTCATTGATTTGATTGAGGAAAAACTAGAGAAGGACGGTTATTCACCTGACTATTCACAGGCAACCATGGTAGACGAACCCGATAATGTCAAACGACAGTCTCTTAGATCACACAGTGAGAGACTTGCCATTGCTTTTGGGTTACTAAATTTGAAACCCGGGATGCCCATACGTATATTTAAGAATCTCCGGGTGTGCAACGATTGCCATCAGGTAACAAAGTCGATTTCTCGAATTTTTAATGTAGAGATTATCACGAGAGATCGTAATAGATTTCACCATTTTAAGAATGGAACGTGTTCCTGCATGGATTTCTGGTGATTTCGTTGTAGAACAGCCAAAAAAACTTATTCATTTGTATAAAAAGCATGGGTGGAAACTGCTGGGAAATGGAA

Coding sequence (CDS)

ATGCTTCTACCAATCCCACCAAATCCAAACTCCATTCCTATTCAAATCAACCACCAGACTCATCTTCTTCAATTGCTTAGCGACTGTACCGATTTCTCAAAGCTCAAGCAAATCCACGCTCAGGCAATTCGCACACTCTCCCCCCACAAATCCTCTCTGTTCATCTTTACCCGAATCCTCTCTGTTTCGTCTTCGACCGATTTCGATTATGCCCGTCGTGTTTTTCATCAAATTCATCCCCCAAATTCGTTCATGTGGAACACCCTCATCGCCGCCTGTGCGCGGAGCTTCGACCGGAAAGAGCAGGCGATTGAGCTTTTCTGCAGAATGTTAGAACAGGGCTTGGCTGAACCAGATAAGCATACTTTCCCTTTTCTTCTCAAGGCTTGTGCTTACTTATTTGCGTTATCTGAAGGGAGGCAGGCTCATGGTTATGTTGTAAAACTTGGGTTGGATTCGGATGTTTATGTTGGTAATAGTTTGATTCATTTTTATGCTTCTTGTGGGTGTTTGAGTTTAGCATTGAAGGTGTTCGATAAAATGCCCCATAGAAGTTTGGTTTCCTGGAATGTGATGATTGAGGGTTATGTCCAATGTGGGCTTTTTGAGAATGCTCTGAAACTGTTTGATGAAATGCAGACTGCTTTTGAGCCTGATGGGTATACCATTCAGAGCGTAATTGGCGCTTGTGCGGGTATCGGTGCTTTGTCTTTGGGAATGTGGGCTCATGCTTATGTGTTGAGGAAGGCCGATGGCGCTATGGCTCGTGATGTGTTGATCAACTCCTCGCTTGTGGATATGTACAGCAAGTGTGGTTCGTTGAGAATGGCTCAGCAAGTATTTGAGACAATGCCTAAACATGACTTGAATTCGTGGAATTCAATGATTCTTGCACTTGCCATGCATGGACAGGCCGTCGCGGCATTGCAGTGTTTCTCTCGGTTGGTTGAGATTGGGCAGTTTCGACCCAACTCTGTTACGTTCGTTGGTGTTCTTAGTGCATGTAACCATAGAGGCATGGTTGCTGAAGGTCGAAAGTATTTTGATATGATGATTAACGAATATAAGATCGAACCCCGGTTGGAGCACTATGGATGCCTTGTTGATCTCCTATGTCGCTCTGGTTTCTTTGATGAAGCTTTAGAGTTGGTGACAGATATGAAAATAAAACCAGATGCAGTGATATGGAGAACTCTTCTTGATGCTTGCTACAAGCAGAATGCTGGTGTTGAGCTGAGCGATGAAGTGGCATTGCAGATTCTTCAATCTGAAACAACAGCTTCGAGCGGTGTTTATGTGCTGTTGTCGAGAGTCTATGCTTCAGCTCGCCAGTGGAACAACGTTGGGCTTATAAGGAAGGCAATGACCGAGAAGGGCGTGACGAAAGAGGCCGGCTGCAGTTTGATAGAAATAGATGGTATTAGCCATGAGTTTTTTGCAGGAGACACATCTCACCCGCATATCAAAAAGATATACGAAGTCATTGATTTGATTGAGGAAAAACTAGAGAAGGACGGTTATTCACCTGACTATTCACAGGCAACCATGGTAGACGAACCCGATAATGTCAAACGACAGTCTCTTAGATCACACAGTGAGAGACTTGCCATTGCTTTTGGGTTACTAAATTTGAAACCCGGGATGCCCATACGTATATTTAAGAATCTCCGGGTGTGCAACGATTGCCATCAGGTAACAAAGTCGATTTCTCGAATTTTTAATGTAGAGATTATCACGAGAGATCGTAATAGATTTCACCATTTTAAGAATGGAACGTGTTCCTGCATGGATTTCTGGTGA

Protein sequence

MLLPIPPNPNSIPIQINHQTHLLQLLSDCTDFSKLKQIHAQAIRTLSPHKSSLFIFTRILSVSSSTDFDYARRVFHQIHPPNSFMWNTLIAACARSFDRKEQAIELFCRMLEQGLAEPDKHTFPFLLKACAYLFALSEGRQAHGYVVKLGLDSDVYVGNSLIHFYASCGCLSLALKVFDKMPHRSLVSWNVMIEGYVQCGLFENALKLFDEMQTAFEPDGYTIQSVIGACAGIGALSLGMWAHAYVLRKADGAMARDVLINSSLVDMYSKCGSLRMAQQVFETMPKHDLNSWNSMILALAMHGQAVAALQCFSRLVEIGQFRPNSVTFVGVLSACNHRGMVAEGRKYFDMMINEYKIEPRLEHYGCLVDLLCRSGFFDEALELVTDMKIKPDAVIWRTLLDACYKQNAGVELSDEVALQILQSETTASSGVYVLLSRVYASARQWNNVGLIRKAMTEKGVTKEAGCSLIEIDGISHEFFAGDTSHPHIKKIYEVIDLIEEKLEKDGYSPDYSQATMVDEPDNVKRQSLRSHSERLAIAFGLLNLKPGMPIRIFKNLRVCNDCHQVTKSISRIFNVEIITRDRNRFHHFKNGTCSCMDFW
Homology
BLAST of Sed0027533 vs. NCBI nr
Match: XP_023537748.1 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1031.9 bits (2667), Expect = 2.1e-297
Identity = 505/605 (83.47%), Postives = 541/605 (89.42%), Query Frame = 0

Query: 1   MLLPIPPNPNSIPIQINHQT------HLLQLLSDCTDFSKLKQIHAQAIRTLSPHKSSLF 60
           M+L IPPN  SIP++I H+T       LL LLSDCTD S+LKQIHAQA+RT S HKSSLF
Sbjct: 1   MILSIPPNGQSIPVEIKHETFHAPQSRLLHLLSDCTDLSRLKQIHAQALRTFSTHKSSLF 60

Query: 61  IFTRILSVSSSTDFDYARRVFHQIHPPNSFMWNTLIAACARSFDRKEQAIELFCRMLEQG 120
           +F+RIL VSS TDF+YA RVF QI  PNSFMWNTLI ACARS DRKEQA +LF RMLE+G
Sbjct: 61  LFSRILHVSSLTDFEYALRVFDQIDSPNSFMWNTLIGACARSLDRKEQANKLFYRMLEEG 120

Query: 121 LAEPDKHTFPFLLKACAYLFALSEGRQAHGYVVKLGLDSDVYVGNSLIHFYASCGCLSLA 180
             EPDKHTFPFLLKACAY+FALSEGRQAH ++VK GLDSDVYVGNSLIH YASCGCLSLA
Sbjct: 121 SVEPDKHTFPFLLKACAYVFALSEGRQAHAHIVKRGLDSDVYVGNSLIHLYASCGCLSLA 180

Query: 181 LKVFDKMPHRSLVSWNVMIEGYVQCGLFENALKLFDEMQTAFEPDGYTIQSVIGACAGIG 240
           LKVF+KMPHRSLVSWNVMI+ YVQCGLFENALKLF EMQ  FEPDGYT+QS+I ACAGIG
Sbjct: 181 LKVFEKMPHRSLVSWNVMIDAYVQCGLFENALKLFAEMQDTFEPDGYTMQSIISACAGIG 240

Query: 241 ALSLGMWAHAYVLRKADGAMARDVLINSSLVDMYSKCGSLRMAQQVFETMPKHDLNSWNS 300
           ALSLGMW+HAYVLRK  GAMA +VLINSSLVDMYSKCGSL MAQQVFETMPKHDLNSWNS
Sbjct: 241 ALSLGMWSHAYVLRKTGGAMAGEVLINSSLVDMYSKCGSLSMAQQVFETMPKHDLNSWNS 300

Query: 301 MILALAMHGQAVAALQCFSRLVEIGQFRPNSVTFVGVLSACNHRGMVAEGRKYFDMMINE 360
           MILA AMHG+A AAL CFSRLVE  +F PNSVTFVGVLSACNHRGMVAEGRKYFDMM+NE
Sbjct: 301 MILAFAMHGRAEAALGCFSRLVETEKFLPNSVTFVGVLSACNHRGMVAEGRKYFDMMVNE 360

Query: 361 YKIEPRLEHYGCLVDLLCRSGFFDEALELVTDMKIKPDAVIWRTLLDACYKQNAGVELSD 420
           YKI PRLEHYGCLVDLL RSGF DEALELVT+M IKPDAVIWRTLLDACYKQNAGVELS+
Sbjct: 361 YKIVPRLEHYGCLVDLLSRSGFIDEALELVTNMHIKPDAVIWRTLLDACYKQNAGVELSE 420

Query: 421 EVALQILQSETTASSGVYVLLSRVYASARQWNNVGLIRKAMTEKGVTKEAGCSLIEIDGI 480
           EVALQILQSETTASSGVYVLLSRVYASA +WN+VGL+RKAM +KGV KE GCS IEIDG+
Sbjct: 421 EVALQILQSETTASSGVYVLLSRVYASAHRWNDVGLVRKAMADKGVAKEPGCSSIEIDGV 480

Query: 481 SHEFFAGDTSHPHIKKIYEVIDLIEEKLEKDGYSPDYSQATMVDEPDNVKRQSLRSHSER 540
           SHEFFAGDTSHP IK+IY VIDLIEEKL+K GYSPDYSQATMVD+PD VK QSL+ HSER
Sbjct: 481 SHEFFAGDTSHPKIKEIYAVIDLIEEKLQKHGYSPDYSQATMVDDPDTVKWQSLKLHSER 540

Query: 541 LAIAFGLLNLKPGMPIRIFKNLRVCNDCHQVTKSISRIFNVEIITRDRNRFHHFKNGTCS 600
            AIAFG+LNLKPGMPIRIFKNLRVCNDCHQVTK ISRIFNVEII RDRNRFHHF+NG CS
Sbjct: 541 FAIAFGILNLKPGMPIRIFKNLRVCNDCHQVTKLISRIFNVEIIMRDRNRFHHFENGMCS 600

BLAST of Sed0027533 vs. NCBI nr
Match: XP_022957211.1 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial [Cucurbita moschata])

HSP 1 Score: 1028.5 bits (2658), Expect = 2.3e-296
Identity = 503/605 (83.14%), Postives = 539/605 (89.09%), Query Frame = 0

Query: 1   MLLPIPPNPNSIPIQINHQT------HLLQLLSDCTDFSKLKQIHAQAIRTLSPHKSSLF 60
           MLL IPPN  SIP++I H+T       LL LLSDCTD S+LKQIHAQA+RT S HKSSLF
Sbjct: 1   MLLSIPPNGQSIPVEIKHETFHARQSRLLHLLSDCTDLSRLKQIHAQALRTFSTHKSSLF 60

Query: 61  IFTRILSVSSSTDFDYARRVFHQIHPPNSFMWNTLIAACARSFDRKEQAIELFCRMLEQG 120
           +F+RIL VSS TDF+YA RVF QI  PNSFMWNTLI ACARS DRKEQAIELF RMLE+G
Sbjct: 61  LFSRILHVSSLTDFEYALRVFDQIDSPNSFMWNTLIGACARSLDRKEQAIELFYRMLEEG 120

Query: 121 LAEPDKHTFPFLLKACAYLFALSEGRQAHGYVVKLGLDSDVYVGNSLIHFYASCGCLSLA 180
             EPDKHTFPFLLKACAY+FALSEGRQAH ++VK GLDSDVYVGNSLIH YASCGCLSLA
Sbjct: 121 SVEPDKHTFPFLLKACAYVFALSEGRQAHAHIVKRGLDSDVYVGNSLIHLYASCGCLSLA 180

Query: 181 LKVFDKMPHRSLVSWNVMIEGYVQCGLFENALKLFDEMQTAFEPDGYTIQSVIGACAGIG 240
           LKVF+KMPHRSLVSWNVMI+ YVQCGLF+NAL LF EMQ  FEPDGYT+QS+I ACAGIG
Sbjct: 181 LKVFEKMPHRSLVSWNVMIDAYVQCGLFKNALNLFAEMQNTFEPDGYTMQSIISACAGIG 240

Query: 241 ALSLGMWAHAYVLRKADGAMARDVLINSSLVDMYSKCGSLRMAQQVFETMPKHDLNSWNS 300
           ALSLGMW+HAYVLRK  GAM  +VLINSSLVDMYSKCGSL MAQQVFETMPKHDLNSWNS
Sbjct: 241 ALSLGMWSHAYVLRKTGGAMVGEVLINSSLVDMYSKCGSLSMAQQVFETMPKHDLNSWNS 300

Query: 301 MILALAMHGQAVAALQCFSRLVEIGQFRPNSVTFVGVLSACNHRGMVAEGRKYFDMMINE 360
           MILA AMHG+A AAL CFSRLVE  +F PNSVTFVGVLSACNHRGMVAEGRKYFDMM+NE
Sbjct: 301 MILAFAMHGRAEAALGCFSRLVETEKFLPNSVTFVGVLSACNHRGMVAEGRKYFDMMVNE 360

Query: 361 YKIEPRLEHYGCLVDLLCRSGFFDEALELVTDMKIKPDAVIWRTLLDACYKQNAGVELSD 420
           YKI PRLEHYGCLVDLL RSGF DEALELVT++ IKPDAVIWR+LLDACYKQNAGVELS+
Sbjct: 361 YKIVPRLEHYGCLVDLLSRSGFIDEALELVTNIHIKPDAVIWRSLLDACYKQNAGVELSE 420

Query: 421 EVALQILQSETTASSGVYVLLSRVYASARQWNNVGLIRKAMTEKGVTKEAGCSLIEIDGI 480
           EVALQILQSETT SSGVYVLLSRVYASA +WN+VGL+RKAM +KGV KE GCS IEIDG+
Sbjct: 421 EVALQILQSETTTSSGVYVLLSRVYASAHRWNDVGLVRKAMADKGVAKEPGCSSIEIDGV 480

Query: 481 SHEFFAGDTSHPHIKKIYEVIDLIEEKLEKDGYSPDYSQATMVDEPDNVKRQSLRSHSER 540
           SHEFFAGDTSHP IK+IY VIDLIEEKL+K GYSPDYSQATMVD+PD VK QSL+ HSER
Sbjct: 481 SHEFFAGDTSHPKIKEIYAVIDLIEEKLQKHGYSPDYSQATMVDDPDTVKWQSLKLHSER 540

Query: 541 LAIAFGLLNLKPGMPIRIFKNLRVCNDCHQVTKSISRIFNVEIITRDRNRFHHFKNGTCS 600
            AIAFGLLNLKPGMPIRIFKNLRVCNDCHQVTK ISRIFNVEII RDRNRFHHF+NG CS
Sbjct: 541 FAIAFGLLNLKPGMPIRIFKNLRVCNDCHQVTKLISRIFNVEIIMRDRNRFHHFENGMCS 600

BLAST of Sed0027533 vs. NCBI nr
Match: KAG7032179.1 (Pentatricopeptide repeat-containing protein, chloroplastic/mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1028.5 bits (2658), Expect = 2.3e-296
Identity = 503/605 (83.14%), Postives = 540/605 (89.26%), Query Frame = 0

Query: 1   MLLPIPPNPNSIPIQINHQT------HLLQLLSDCTDFSKLKQIHAQAIRTLSPHKSSLF 60
           MLL IPPN  SIP++I H+T       LL LLSDCTD S+LKQIHAQA+RT S HKSSLF
Sbjct: 1   MLLSIPPNGQSIPVEIKHETFHARQSRLLHLLSDCTDLSRLKQIHAQALRTFSTHKSSLF 60

Query: 61  IFTRILSVSSSTDFDYARRVFHQIHPPNSFMWNTLIAACARSFDRKEQAIELFCRMLEQG 120
           +F+RIL  SS TDF+YA RVF QI  PNSF+WNTLI ACARS DRKEQAIELF RMLE+G
Sbjct: 61  LFSRILHASSLTDFEYALRVFDQIDSPNSFVWNTLIGACARSLDRKEQAIELFYRMLEEG 120

Query: 121 LAEPDKHTFPFLLKACAYLFALSEGRQAHGYVVKLGLDSDVYVGNSLIHFYASCGCLSLA 180
             EPDKHTFPFLLKACAY+FALSEGRQAH ++VK GLDSDVYVGNSLIH +ASCG LSLA
Sbjct: 121 SVEPDKHTFPFLLKACAYVFALSEGRQAHAHIVKRGLDSDVYVGNSLIHLHASCGYLSLA 180

Query: 181 LKVFDKMPHRSLVSWNVMIEGYVQCGLFENALKLFDEMQTAFEPDGYTIQSVIGACAGIG 240
           LKVF+KMPHRSLVSWNVMI+ YVQCGLFENAL LF EMQ  FEPDGYT+QS+I ACAGIG
Sbjct: 181 LKVFEKMPHRSLVSWNVMIDAYVQCGLFENALNLFAEMQNTFEPDGYTMQSIISACAGIG 240

Query: 241 ALSLGMWAHAYVLRKADGAMARDVLINSSLVDMYSKCGSLRMAQQVFETMPKHDLNSWNS 300
           ALSLGMW+HAYVLRK  GAMA +VLINSSLVDMYSKCGSL MAQQVFETMPKHDLNSWNS
Sbjct: 241 ALSLGMWSHAYVLRKTGGAMAGEVLINSSLVDMYSKCGSLSMAQQVFETMPKHDLNSWNS 300

Query: 301 MILALAMHGQAVAALQCFSRLVEIGQFRPNSVTFVGVLSACNHRGMVAEGRKYFDMMINE 360
           MILA AMHG+A AAL CFSRLVE  +F PNSVTFVGVLSACNHRGMVAEGRKYFDMM+NE
Sbjct: 301 MILAFAMHGRAEAALGCFSRLVETEKFLPNSVTFVGVLSACNHRGMVAEGRKYFDMMVNE 360

Query: 361 YKIEPRLEHYGCLVDLLCRSGFFDEALELVTDMKIKPDAVIWRTLLDACYKQNAGVELSD 420
           YKI PRLEHYGCLVDLL RSGF DEALELVT+M IKPDAVIWR+LLDACYKQNAGVELS+
Sbjct: 361 YKIVPRLEHYGCLVDLLSRSGFIDEALELVTNMHIKPDAVIWRSLLDACYKQNAGVELSE 420

Query: 421 EVALQILQSETTASSGVYVLLSRVYASARQWNNVGLIRKAMTEKGVTKEAGCSLIEIDGI 480
           EVALQILQSETT SSGVYVLLSR+YASA +WN+VGL+RKAM +KGVTKE GCS IEIDG+
Sbjct: 421 EVALQILQSETTTSSGVYVLLSRIYASANRWNDVGLVRKAMADKGVTKEPGCSSIEIDGV 480

Query: 481 SHEFFAGDTSHPHIKKIYEVIDLIEEKLEKDGYSPDYSQATMVDEPDNVKRQSLRSHSER 540
           SHEFFAGDTSHP IK+IY VIDLIEEKL+K GYSPDYSQATMVD+PD VKRQSL+ HSER
Sbjct: 481 SHEFFAGDTSHPKIKEIYAVIDLIEEKLQKHGYSPDYSQATMVDDPDTVKRQSLKLHSER 540

Query: 541 LAIAFGLLNLKPGMPIRIFKNLRVCNDCHQVTKSISRIFNVEIITRDRNRFHHFKNGTCS 600
            AIAFGLLNLKPGMPIRIFKNLRVCNDCHQVTK ISRIFNVEII RDRNRFHHF+NG CS
Sbjct: 541 FAIAFGLLNLKPGMPIRIFKNLRVCNDCHQVTKLISRIFNVEIIMRDRNRFHHFENGMCS 600

BLAST of Sed0027533 vs. NCBI nr
Match: XP_038892628.1 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial [Benincasa hispida])

HSP 1 Score: 1028.1 bits (2657), Expect = 3.1e-296
Identity = 503/605 (83.14%), Postives = 547/605 (90.41%), Query Frame = 0

Query: 1   MLLPIPPNPNSIPIQI------NHQTHLLQLLSDCTDFSKLKQIHAQAIRTLSPHKSSLF 60
           MLL IPPN  SIPI+I       HQ+ LL LL+ CTD SKLKQIHAQ IR  S HKSSLF
Sbjct: 1   MLLAIPPNAQSIPIEIKRETFHTHQSRLLHLLTHCTDLSKLKQIHAQVIRNFSTHKSSLF 60

Query: 61  IFTRILSVSSSTDFDYARRVFHQIHPPNSFMWNTLIAACARSFDRKEQAIELFCRMLEQG 120
           +++RIL VSS TDFDYA RVF+QI  PNSFMWNTLI ACARS DRKEQAIELF  MLE+G
Sbjct: 61  LYSRILHVSSLTDFDYACRVFYQIGNPNSFMWNTLIGACARSLDRKEQAIELFYGMLEEG 120

Query: 121 LAEPDKHTFPFLLKACAYLFALSEGRQAHGYVVKLGLDSDVYVGNSLIHFYASCGCLSLA 180
             EPDKHTFPFLLKACAY+FALSEGRQAH ++VKLGLDSDVYVGNSLIH YASCGCLS+A
Sbjct: 121 SVEPDKHTFPFLLKACAYVFALSEGRQAHAHIVKLGLDSDVYVGNSLIHLYASCGCLSIA 180

Query: 181 LKVFDKMPHRSLVSWNVMIEGYVQCGLFENALKLFDEMQTAFEPDGYTIQSVIGACAGIG 240
           LKVF+KMP RSLVSWNVMI+ YVQCG FENALKLF +MQ +FEPDGYT+QS+IGACAGIG
Sbjct: 181 LKVFEKMPLRSLVSWNVMIDAYVQCGDFENALKLFVDMQNSFEPDGYTMQSIIGACAGIG 240

Query: 241 ALSLGMWAHAYVLRKADGAMARDVLINSSLVDMYSKCGSLRMAQQVFETMPKHDLNSWNS 300
           ALS+GMWAHAYVLRKA+GAMA DVLINSSL+DMYSKC SLRMAQQVF+TMPKHDLNSWNS
Sbjct: 241 ALSVGMWAHAYVLRKANGAMANDVLINSSLIDMYSKCASLRMAQQVFDTMPKHDLNSWNS 300

Query: 301 MILALAMHGQAVAALQCFSRLVEIGQFRPNSVTFVGVLSACNHRGMVAEGRKYFDMMINE 360
           MILA AMHG+  AALQCFSRLVE+ +F+PNSVTFVGVLSACNHRGMVA+GRKYFDMM+NE
Sbjct: 301 MILAHAMHGRGEAALQCFSRLVEMEKFQPNSVTFVGVLSACNHRGMVADGRKYFDMMVNE 360

Query: 361 YKIEPRLEHYGCLVDLLCRSGFFDEALELVTDMKIKPDAVIWRTLLDACYKQNAGVELSD 420
           YKIEPRLEHYGCLVDLL RSGF DEALELVT+M IKPDAVIWR+LLDACYKQNAGVELS+
Sbjct: 361 YKIEPRLEHYGCLVDLLSRSGFIDEALELVTNMHIKPDAVIWRSLLDACYKQNAGVELSE 420

Query: 421 EVALQILQSETTASSGVYVLLSRVYASARQWNNVGLIRKAMTEKGVTKEAGCSLIEIDGI 480
           EVAL+ILQSE TASSGVYVLLSRVYASARQWN+VGL+RKAM +KGVTKE GCS IEIDGI
Sbjct: 421 EVALEILQSEKTASSGVYVLLSRVYASARQWNDVGLVRKAMVDKGVTKEPGCSSIEIDGI 480

Query: 481 SHEFFAGDTSHPHIKKIYEVIDLIEEKLEKDGYSPDYSQATMVDEPDNVKRQSLRSHSER 540
           +HEFFAGDTSHP IK+IY VIDLIEEKLEK GYSPD SQATMVDEPD +KRQSL+ HSER
Sbjct: 481 NHEFFAGDTSHPKIKEIYGVIDLIEEKLEKHGYSPDCSQATMVDEPDVIKRQSLKLHSER 540

Query: 541 LAIAFGLLNLKPGMPIRIFKNLRVCNDCHQVTKSISRIFNVEIITRDRNRFHHFKNGTCS 600
           LAIAFGLLNLKPG+P+RIFKNL+VCNDCHQVTK IS+IFNVEII RDRNRFHHFK+G CS
Sbjct: 541 LAIAFGLLNLKPGVPMRIFKNLKVCNDCHQVTKLISQIFNVEIIMRDRNRFHHFKSGMCS 600

BLAST of Sed0027533 vs. NCBI nr
Match: XP_022998351.1 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial [Cucurbita maxima])

HSP 1 Score: 1027.3 bits (2655), Expect = 5.2e-296
Identity = 504/605 (83.31%), Postives = 542/605 (89.59%), Query Frame = 0

Query: 1   MLLPIPPNPNSIPIQINHQTH------LLQLLSDCTDFSKLKQIHAQAIRTLSPHKSSLF 60
           MLL IPPN  SIP++I H+T       LL LLS+CTD S+LKQIHAQA+RT S HKSSLF
Sbjct: 1   MLLSIPPNGQSIPVEIKHETFHARQSGLLHLLSNCTDLSRLKQIHAQALRTFSTHKSSLF 60

Query: 61  IFTRILSVSSSTDFDYARRVFHQIHPPNSFMWNTLIAACARSFDRKEQAIELFCRMLEQG 120
           +F+RIL VSS TDF+YA RVF QI  PNSFMWNTLI ACARS DRK+QAIELF RMLE+G
Sbjct: 61  LFSRILHVSSLTDFEYALRVFDQIDSPNSFMWNTLIGACARSLDRKKQAIELFYRMLEEG 120

Query: 121 LAEPDKHTFPFLLKACAYLFALSEGRQAHGYVVKLGLDSDVYVGNSLIHFYASCGCLSLA 180
             EPDKHTFPFLLKACAY+FALSEGRQAH ++VK GLDSDVYVGNSLIH YASCGCLSLA
Sbjct: 121 SVEPDKHTFPFLLKACAYVFALSEGRQAHAHIVKRGLDSDVYVGNSLIHLYASCGCLSLA 180

Query: 181 LKVFDKMPHRSLVSWNVMIEGYVQCGLFENALKLFDEMQTAFEPDGYTIQSVIGACAGIG 240
           LKVF++MPHRSLVSWNVMI+ YVQ GLFENALKLF EMQ  FEPDGYT+QS+I ACAGIG
Sbjct: 181 LKVFEQMPHRSLVSWNVMIDAYVQRGLFENALKLFAEMQDTFEPDGYTMQSIISACAGIG 240

Query: 241 ALSLGMWAHAYVLRKADGAMARDVLINSSLVDMYSKCGSLRMAQQVFETMPKHDLNSWNS 300
           ALSLGMW+HAYVLR+  GAMA +VLINSSLVDMYSKCGSLRMAQQVFETMPK DLNSWNS
Sbjct: 241 ALSLGMWSHAYVLRRTGGAMAGEVLINSSLVDMYSKCGSLRMAQQVFETMPKRDLNSWNS 300

Query: 301 MILALAMHGQAVAALQCFSRLVEIGQFRPNSVTFVGVLSACNHRGMVAEGRKYFDMMINE 360
           MILALAMHG+A AAL CFSRLVE  +F PNSVTFVGVLSACNHRGMV EGRKYFDMM+NE
Sbjct: 301 MILALAMHGRAEAALGCFSRLVETEKFLPNSVTFVGVLSACNHRGMVTEGRKYFDMMVNE 360

Query: 361 YKIEPRLEHYGCLVDLLCRSGFFDEALELVTDMKIKPDAVIWRTLLDACYKQNAGVELSD 420
           YKI PRLEHYGCLVDLL RSGF DEALELVT+M IKPDAVIWR+LLDACYKQNAGVELS+
Sbjct: 361 YKIVPRLEHYGCLVDLLSRSGFIDEALELVTNMHIKPDAVIWRSLLDACYKQNAGVELSE 420

Query: 421 EVALQILQSETTASSGVYVLLSRVYASARQWNNVGLIRKAMTEKGVTKEAGCSLIEIDGI 480
           EVALQILQSETTASSGVYVLLSRVYASA +WN+VGL+RKAM +KGV KE GCS IEIDG+
Sbjct: 421 EVALQILQSETTASSGVYVLLSRVYASAHRWNDVGLVRKAMADKGVAKEPGCSSIEIDGV 480

Query: 481 SHEFFAGDTSHPHIKKIYEVIDLIEEKLEKDGYSPDYSQATMVDEPDNVKRQSLRSHSER 540
           SHEFFAGDTSHP IK+IY VIDLIEEKL+K GYSPDYSQATMVD+PD VKRQSL+ HSER
Sbjct: 481 SHEFFAGDTSHPKIKEIYAVIDLIEEKLQKHGYSPDYSQATMVDDPDTVKRQSLKLHSER 540

Query: 541 LAIAFGLLNLKPGMPIRIFKNLRVCNDCHQVTKSISRIFNVEIITRDRNRFHHFKNGTCS 600
            AIAFGLLNLKPGMPIRIFKNLRVCNDCHQVTK ISRIFNVEII RDRNRFHHF+NG CS
Sbjct: 541 FAIAFGLLNLKPGMPIRIFKNLRVCNDCHQVTKLISRIFNVEIIMRDRNRFHHFENGMCS 600

BLAST of Sed0027533 vs. ExPASy Swiss-Prot
Match: Q0WQW5 (Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H51 PE=1 SV=2)

HSP 1 Score: 741.9 bits (1914), Expect = 5.7e-213
Identity = 358/593 (60.37%), Postives = 451/593 (76.05%), Query Frame = 0

Query: 17  NHQTHLLQLLSDCTDFSKLKQIHAQAIRTLSPHK-SSLFIFTRILSVSSS-TDFDYARRV 76
           NH   +  L   C+D S+LKQ+HA  +RT  P + ++LF++ +IL +SSS +D +YA RV
Sbjct: 46  NHHQRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRV 105

Query: 77  FHQIHPPNSFMWNTLIAACARSFDRKEQAIELFCRMLEQGLAEPDKHTFPFLLKACAYLF 136
           F  I   +SFMWNTLI ACA    RKE+A  L+ +MLE+G + PDKHTFPF+LKACAY+F
Sbjct: 106 FDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIF 165

Query: 137 ALSEGRQAHGYVVKLGLDSDVYVGNSLIHFYASCGCLSLALKVFDKMPHRSLVSWNVMIE 196
             SEG+Q H  +VK G   DVYV N LIH Y SCGCL LA KVFD+MP RSLVSWN MI+
Sbjct: 166 GFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMID 225

Query: 197 GYVQCGLFENALKLFDEMQTAFEPDGYTIQSVIGACAGIGALSLGMWAHAYVLRKADGAM 256
             V+ G +++AL+LF EMQ +FEPDGYT+QSV+ ACAG+G+LSLG WAHA++LRK D  +
Sbjct: 226 ALVRFGEYDSALQLFREMQRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDV 285

Query: 257 ARDVLINSSLVDMYSKCGSLRMAQQVFETMPKHDLNSWNSMILALAMHGQAVAALQCFSR 316
           A DVL+ +SL++MY KCGSLRMA+QVF+ M K DL SWN+MIL  A HG+A  A+  F R
Sbjct: 286 AMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDR 345

Query: 317 LVEIGQ-FRPNSVTFVGVLSACNHRGMVAEGRKYFDMMINEYKIEPRLEHYGCLVDLLCR 376
           +V+  +  RPNSVTFVG+L ACNHRG V +GR+YFDMM+ +Y IEP LEHYGC+VDL+ R
Sbjct: 346 MVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIAR 405

Query: 377 SGFFDEALELVTDMKIKPDAVIWRTLLDACYKQNAGVELSDEVALQIL------QSETTA 436
           +G+  EA+++V  M +KPDAVIWR+LLDAC K+ A VELS+E+A  I+      +S    
Sbjct: 406 AGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGN 465

Query: 437 SSGVYVLLSRVYASARQWNNVGLIRKAMTEKGVTKEAGCSLIEIDGISHEFFAGDTSHPH 496
            SG YVLLSRVYASA +WN+VG++RK M+E G+ KE GCS IEI+GISHEFFAGDTSHP 
Sbjct: 466 CSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQ 525

Query: 497 IKKIYEVIDLIEEKLEKDGYSPDYSQATMVDEP-DNVKRQSLRSHSERLAIAFGLLNLKP 556
            K+IY+ + +I+++L   GY PD SQA +VD   D  K  SLR HSERLAIAFGL+NL P
Sbjct: 526 TKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLPP 585

Query: 557 GMPIRIFKNLRVCNDCHQVTKSISRIFNVEIITRDRNRFHHFKNGTCSCMDFW 600
             PIRIFKNLRVCNDCH+VTK IS++FN EII RDR RFHHFK+G+CSC+D+W
Sbjct: 586 QTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638

BLAST of Sed0027533 vs. ExPASy Swiss-Prot
Match: A8MQA3 (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H28 PE=2 SV=2)

HSP 1 Score: 466.1 bits (1198), Expect = 6.1e-130
Identity = 245/575 (42.61%), Postives = 352/575 (61.22%), Query Frame = 0

Query: 30  TDFSKLKQIHAQAIR---TLSPHKSSLFIFTRILSVSSSTDFDYARRVFHQIHPP-NSFM 89
           +  +KL+QIHA +IR   ++S  +    +   ++S+ S     YA +VF +I  P N F+
Sbjct: 28  SSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFI 87

Query: 90  WNTLIAACARSFDRKEQAIELFCRMLEQGLAEPDKHTFPFLLKACAYLFALSEGRQAHGY 149
           WNTLI   A        A  L+  M   GL EPD HT+PFL+KA   +  +  G   H  
Sbjct: 88  WNTLIRGYA-EIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSV 147

Query: 150 VVKLGLDSDVYVGNSLIHFYASCGCLSLALKVFDKMPHRSLVSWNVMIEGYVQCGLFENA 209
           V++ G  S +YV NSL+H YA+CG ++ A KVFDKMP + LV+WN +I G+ + G  E A
Sbjct: 148 VIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEA 207

Query: 210 LKLFDEMQT-AFEPDGYTIQSVIGACAGIGALSLGMWAHAYVLRKADGAMARDVLINSSL 269
           L L+ EM +   +PDG+TI S++ ACA IGAL+LG   H Y+++     + R++  ++ L
Sbjct: 208 LALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV---GLTRNLHSSNVL 267

Query: 270 VDMYSKCGSLRMAQQVFETMPKHDLNSWNSMILALAMHGQAVAALQCFSRLVEIGQFRPN 329
           +D+Y++CG +  A+ +F+ M   +  SW S+I+ LA++G    A++ F  +       P 
Sbjct: 268 LDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPC 327

Query: 330 SVTFVGVLSACNHRGMVAEGRKYFDMMINEYKIEPRLEHYGCLVDLLCRSGFFDEALELV 389
            +TFVG+L AC+H GMV EG +YF  M  EYKIEPR+EH+GC+VDLL R+G   +A E +
Sbjct: 328 EITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYI 387

Query: 390 TDMKIKPDAVIWRTLLDACYKQNAGVELSDEVALQILQSETTASSGVYVLLSRVYASARQ 449
             M ++P+ VIWRTLL AC   +   +L++   +QILQ E    SG YVLLS +YAS ++
Sbjct: 388 KSMPMQPNVVIWRTLLGAC-TVHGDSDLAEFARIQILQLEPN-HSGDYVLLSNMYASEQR 447

Query: 450 WNNVGLIRKAMTEKGVTKEAGCSLIEIDGISHEFFAGDTSHPHIKKIYEVIDLIEEKLEK 509
           W++V  IRK M   GV K  G SL+E+    HEF  GD SHP    IY  +  +  +L  
Sbjct: 448 WSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRS 507

Query: 510 DGYSPDYSQATMVDEPDNVKRQSLRSHSERLAIAFGLLNLKPGMPIRIFKNLRVCNDCHQ 569
           +GY P  S    VD  +  K  ++  HSE++AIAF L++     PI + KNLRVC DCH 
Sbjct: 508 EGYVPQISN-VYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHL 567

Query: 570 VTKSISRIFNVEIITRDRNRFHHFKNGTCSCMDFW 600
             K +S+++N EI+ RDR+RFHHFKNG+CSC D+W
Sbjct: 568 AIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595

BLAST of Sed0027533 vs. ExPASy Swiss-Prot
Match: Q9FI80 (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H38 PE=2 SV=1)

HSP 1 Score: 466.1 bits (1198), Expect = 6.1e-130
Identity = 256/645 (39.69%), Postives = 362/645 (56.12%), Query Frame = 0

Query: 8   NPNSIPIQINHQTHLLQLLSDCTDFSKLKQIHAQAIR------TLSPHKSSLFIFTRILS 67
           +P S P   +H + L   +++C     L QIHA  I+      TL+  +   F  T  L 
Sbjct: 14  SPASSP--ASHPSSLFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDL- 73

Query: 68  VSSSTDFDYARRVFHQIHPPNSFMWNTLIAACARSFDRKEQ-AIELFCRMLEQGLAEPDK 127
                D DYA ++F+Q+   N F WNT+I   + S + K   AI LF  M+     EP++
Sbjct: 74  --HHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNR 133

Query: 128 HTFPFLLKACAYLFALSEGRQAHGYVVKLGLDSDVYVGNSLIHFYASCGCL--------- 187
            TFP +LKACA    + EG+Q HG  +K G   D +V ++L+  Y  CG +         
Sbjct: 134 FTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYK 193

Query: 188 ------------------------------------SLALKVFDKMPHRSLVSWNVMIEG 247
                                                 A  +FDKM  RS+VSWN MI G
Sbjct: 194 NIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISG 253

Query: 248 YVQCGLFENALKLFDEMQTA-FEPDGYTIQSVIGACAGIGALSLGMWAHAYVLRKADGAM 307
           Y   G F++A+++F EM+     P+  T+ SV+ A + +G+L LG W H Y     D  +
Sbjct: 254 YSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYA---EDSGI 313

Query: 308 ARDVLINSSLVDMYSKCGSLRMAQQVFETMPKHDLNSWNSMILALAMHGQAVAALQCFSR 367
             D ++ S+L+DMYSKCG +  A  VFE +P+ ++ +W++MI   A+HGQA  A+ CF +
Sbjct: 314 RIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCK 373

Query: 368 LVEIGQFRPNSVTFVGVLSACNHRGMVAEGRKYFDMMINEYKIEPRLEHYGCLVDLLCRS 427
           + + G  RP+ V ++ +L+AC+H G+V EGR+YF  M++   +EPR+EHYGC+VDLL RS
Sbjct: 374 MRQAG-VRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRS 433

Query: 428 GFFDEALELVTDMKIKPDAVIWRTLLDACYKQNAGVELSDEVALQILQSETTASSGVYVL 487
           G  DEA E + +M IKPD VIW+ LL AC +    VE+   VA  IL       SG YV 
Sbjct: 434 GLLDEAEEFILNMPIKPDDVIWKALLGAC-RMQGNVEMGKRVA-NILMDMVPHDSGAYVA 493

Query: 488 LSRVYASARQWNNVGLIRKAMTEKGVTKEAGCSLIEIDGISHEFFAGDTSHPHIKKIYEV 547
           LS +YAS   W+ V  +R  M EK + K+ GCSLI+IDG+ HEF   D SHP  K+I  +
Sbjct: 494 LSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSM 553

Query: 548 IDLIEEKLEKDGYSPDYSQATMVDEPDNVKRQSLRSHSERLAIAFGLLNLKPGMPIRIFK 600
           +  I +KL   GY P  +Q  +  E ++ K   L  HSE++A AFGL++  PG PIRI K
Sbjct: 554 LVEISDKLRLAGYRPITTQVLLNLEEED-KENVLHYHSEKIATAFGLISTSPGKPIRIVK 613

BLAST of Sed0027533 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 466.1 bits (1198), Expect = 6.1e-130
Identity = 236/554 (42.60%), Postives = 351/554 (63.36%), Query Frame = 0

Query: 47  SPHKSSLFIFTRILSVSSSTDFDYARRVFHQIHPPNSFMWNTLIAACARSFDRKEQAIEL 106
           SPH+  +     I   +S    + A+++F +I   +   WN +I+  A + + KE A+EL
Sbjct: 195 SPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKE-ALEL 254

Query: 107 FCRMLEQGLAEPDKHTFPFLLKACAYLFALSEGRQAHGYVVKLGLDSDVYVGNSLIHFYA 166
           F  M++  +  PD+ T   ++ ACA   ++  GRQ H ++   G  S++ + N+LI  Y+
Sbjct: 255 FKDMMKTNV-RPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYS 314

Query: 167 SCGCLSLALKVFDKMPHRSLVSWNVMIEGYVQCGLFENALKLFDEMQTAFE-PDGYTIQS 226
            CG L  A  +F+++P++ ++SWN +I GY    L++ AL LF EM  + E P+  T+ S
Sbjct: 315 KCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLS 374

Query: 227 VIGACAGIGALSLGMWAHAYVLRKADGAMARDVLINSSLVDMYSKCGSLRMAQQVFETMP 286
           ++ ACA +GA+ +G W H Y+ ++  G      L  +SL+DMY+KCG +  A QVF ++ 
Sbjct: 375 ILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSL-RTSLIDMYAKCGDIEAAHQVFNSIL 434

Query: 287 KHDLNSWNSMILALAMHGQAVAALQCFSRLVEIGQFRPNSVTFVGVLSACNHRGMVAEGR 346
              L+SWN+MI   AMHG+A A+   FSR+ +IG  +P+ +TFVG+LSAC+H GM+  GR
Sbjct: 435 HKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIG-IQPDDITFVGLLSACSHSGMLDLGR 494

Query: 347 KYFDMMINEYKIEPRLEHYGCLVDLLCRSGFFDEALELVTDMKIKPDAVIWRTLLDACYK 406
             F  M  +YK+ P+LEHYGC++DLL  SG F EA E++  M+++PD VIW +LL AC K
Sbjct: 495 HIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKAC-K 554

Query: 407 QNAGVELSDEVALQILQSETTASSGVYVLLSRVYASARQWNNVGLIRKAMTEKGVTKEAG 466
            +  VEL +  A  +++ E   + G YVLLS +YASA +WN V   R  + +KG+ K  G
Sbjct: 555 MHGNVELGESFAENLIKIE-PENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPG 614

Query: 467 CSLIEIDGISHEFFAGDTSHPHIKKIYEVIDLIEEKLEKDGYSPDYSQATMVDEPDNVKR 526
           CS IEID + HEF  GD  HP  ++IY +++ +E  LEK G+ PD S+  + +  +  K 
Sbjct: 615 CSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSE-VLQEMEEEWKE 674

Query: 527 QSLRSHSERLAIAFGLLNLKPGMPIRIFKNLRVCNDCHQVTKSISRIFNVEIITRDRNRF 586
            +LR HSE+LAIAFGL++ KPG  + I KNLRVC +CH+ TK IS+I+  EII RDR RF
Sbjct: 675 GALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRF 734

Query: 587 HHFKNGTCSCMDFW 600
           HHF++G CSC D+W
Sbjct: 735 HHFRDGVCSCNDYW 741

BLAST of Sed0027533 vs. ExPASy Swiss-Prot
Match: Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 2.5e-123
Identity = 239/627 (38.12%), Postives = 360/627 (57.42%), Query Frame = 0

Query: 8   NPNSIPIQINHQTH-LLQLLSDCTDFSKLKQIHAQAIRT-LSPHKSSLFIFTRILSVSSS 67
           N  S    + H  +  +  L  C+   +LKQIHA+ ++T L     ++  F      S+S
Sbjct: 2   NVISCSFSLEHNLYETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTS 61

Query: 68  TDF-DYARRVFHQIHPPNSFMWNTLIAACARSFDRKEQAIELFCRMLEQGLAEPDKHTFP 127
           +DF  YA+ VF     P++F+WN +I   + S D  E+++ L+ RML    A  + +TFP
Sbjct: 62  SDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCS-DEPERSLLLYQRMLCSS-APHNAYTFP 121

Query: 128 FLLKACAYLFALSEGRQAHGYVVKLGLDSDVYVGNSLIHFYA------------------ 187
            LLKAC+ L A  E  Q H  + KLG ++DVY  NSLI+ YA                  
Sbjct: 122 SLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEP 181

Query: 188 -------------SCGCLSLALKVFDKMPHRSLVSWNVMIEGYVQCGLFENALKLFDEMQ 247
                          G + +AL +F KM  ++ +SW  MI GYVQ  + + AL+LF EMQ
Sbjct: 182 DDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQ 241

Query: 248 TA-FEPDGYTIQSVIGACAGIGALSLGMWAHAYVLRKADGAMARDVLINSSLVDMYSKCG 307
            +  EPD  ++ + + ACA +GAL  G W H+Y+ +     +  D ++   L+DMY+KCG
Sbjct: 242 NSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKT---RIRMDSVLGCVLIDMYAKCG 301

Query: 308 SLRMAQQVFETMPKHDLNSWNSMILALAMHGQAVAALQCFSRLVEIGQFRPNSVTFVGVL 367
            +  A +VF+ + K  + +W ++I   A HG    A+  F  + ++G  +PN +TF  VL
Sbjct: 302 EMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMG-IKPNVITFTAVL 361

Query: 368 SACNHRGMVAEGRKYFDMMINEYKIEPRLEHYGCLVDLLCRSGFFDEALELVTDMKIKPD 427
           +AC++ G+V EG+  F  M  +Y ++P +EHYGC+VDLL R+G  DEA   + +M +KP+
Sbjct: 362 TACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPN 421

Query: 428 AVIWRTLLDACYKQNAGVELSDEVALQILQSETTASSGVYVLLSRVYASARQWNNVGLIR 487
           AVIW  LL AC + +  +EL +E+  +IL +      G YV  + ++A  ++W+     R
Sbjct: 422 AVIWGALLKAC-RIHKNIELGEEIG-EILIAIDPYHGGRYVHKANIHAMDKKWDKAAETR 481

Query: 488 KAMTEKGVTKEAGCSLIEIDGISHEFFAGDTSHPHIKKIYEVIDLIEEKLEKDGYSPDYS 547
           + M E+GV K  GCS I ++G +HEF AGD SHP I+KI     ++  KLE++GY P+  
Sbjct: 482 RLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELE 541

Query: 548 QATMVDEPDNVKRQSLRSHSERLAIAFGLLNLKPGMPIRIFKNLRVCNDCHQVTKSISRI 600
           +  +    D+ +   +  HSE+LAI +GL+  KPG  IRI KNLRVC DCH+VTK IS+I
Sbjct: 542 EMLLDLVDDDEREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKI 601

BLAST of Sed0027533 vs. ExPASy TrEMBL
Match: A0A6J1GYL5 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111458669 PE=3 SV=1)

HSP 1 Score: 1028.5 bits (2658), Expect = 1.1e-296
Identity = 503/605 (83.14%), Postives = 539/605 (89.09%), Query Frame = 0

Query: 1   MLLPIPPNPNSIPIQINHQT------HLLQLLSDCTDFSKLKQIHAQAIRTLSPHKSSLF 60
           MLL IPPN  SIP++I H+T       LL LLSDCTD S+LKQIHAQA+RT S HKSSLF
Sbjct: 1   MLLSIPPNGQSIPVEIKHETFHARQSRLLHLLSDCTDLSRLKQIHAQALRTFSTHKSSLF 60

Query: 61  IFTRILSVSSSTDFDYARRVFHQIHPPNSFMWNTLIAACARSFDRKEQAIELFCRMLEQG 120
           +F+RIL VSS TDF+YA RVF QI  PNSFMWNTLI ACARS DRKEQAIELF RMLE+G
Sbjct: 61  LFSRILHVSSLTDFEYALRVFDQIDSPNSFMWNTLIGACARSLDRKEQAIELFYRMLEEG 120

Query: 121 LAEPDKHTFPFLLKACAYLFALSEGRQAHGYVVKLGLDSDVYVGNSLIHFYASCGCLSLA 180
             EPDKHTFPFLLKACAY+FALSEGRQAH ++VK GLDSDVYVGNSLIH YASCGCLSLA
Sbjct: 121 SVEPDKHTFPFLLKACAYVFALSEGRQAHAHIVKRGLDSDVYVGNSLIHLYASCGCLSLA 180

Query: 181 LKVFDKMPHRSLVSWNVMIEGYVQCGLFENALKLFDEMQTAFEPDGYTIQSVIGACAGIG 240
           LKVF+KMPHRSLVSWNVMI+ YVQCGLF+NAL LF EMQ  FEPDGYT+QS+I ACAGIG
Sbjct: 181 LKVFEKMPHRSLVSWNVMIDAYVQCGLFKNALNLFAEMQNTFEPDGYTMQSIISACAGIG 240

Query: 241 ALSLGMWAHAYVLRKADGAMARDVLINSSLVDMYSKCGSLRMAQQVFETMPKHDLNSWNS 300
           ALSLGMW+HAYVLRK  GAM  +VLINSSLVDMYSKCGSL MAQQVFETMPKHDLNSWNS
Sbjct: 241 ALSLGMWSHAYVLRKTGGAMVGEVLINSSLVDMYSKCGSLSMAQQVFETMPKHDLNSWNS 300

Query: 301 MILALAMHGQAVAALQCFSRLVEIGQFRPNSVTFVGVLSACNHRGMVAEGRKYFDMMINE 360
           MILA AMHG+A AAL CFSRLVE  +F PNSVTFVGVLSACNHRGMVAEGRKYFDMM+NE
Sbjct: 301 MILAFAMHGRAEAALGCFSRLVETEKFLPNSVTFVGVLSACNHRGMVAEGRKYFDMMVNE 360

Query: 361 YKIEPRLEHYGCLVDLLCRSGFFDEALELVTDMKIKPDAVIWRTLLDACYKQNAGVELSD 420
           YKI PRLEHYGCLVDLL RSGF DEALELVT++ IKPDAVIWR+LLDACYKQNAGVELS+
Sbjct: 361 YKIVPRLEHYGCLVDLLSRSGFIDEALELVTNIHIKPDAVIWRSLLDACYKQNAGVELSE 420

Query: 421 EVALQILQSETTASSGVYVLLSRVYASARQWNNVGLIRKAMTEKGVTKEAGCSLIEIDGI 480
           EVALQILQSETT SSGVYVLLSRVYASA +WN+VGL+RKAM +KGV KE GCS IEIDG+
Sbjct: 421 EVALQILQSETTTSSGVYVLLSRVYASAHRWNDVGLVRKAMADKGVAKEPGCSSIEIDGV 480

Query: 481 SHEFFAGDTSHPHIKKIYEVIDLIEEKLEKDGYSPDYSQATMVDEPDNVKRQSLRSHSER 540
           SHEFFAGDTSHP IK+IY VIDLIEEKL+K GYSPDYSQATMVD+PD VK QSL+ HSER
Sbjct: 481 SHEFFAGDTSHPKIKEIYAVIDLIEEKLQKHGYSPDYSQATMVDDPDTVKWQSLKLHSER 540

Query: 541 LAIAFGLLNLKPGMPIRIFKNLRVCNDCHQVTKSISRIFNVEIITRDRNRFHHFKNGTCS 600
            AIAFGLLNLKPGMPIRIFKNLRVCNDCHQVTK ISRIFNVEII RDRNRFHHF+NG CS
Sbjct: 541 FAIAFGLLNLKPGMPIRIFKNLRVCNDCHQVTKLISRIFNVEIIMRDRNRFHHFENGMCS 600

BLAST of Sed0027533 vs. ExPASy TrEMBL
Match: A0A6J1KA08 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111492988 PE=3 SV=1)

HSP 1 Score: 1027.3 bits (2655), Expect = 2.5e-296
Identity = 504/605 (83.31%), Postives = 542/605 (89.59%), Query Frame = 0

Query: 1   MLLPIPPNPNSIPIQINHQTH------LLQLLSDCTDFSKLKQIHAQAIRTLSPHKSSLF 60
           MLL IPPN  SIP++I H+T       LL LLS+CTD S+LKQIHAQA+RT S HKSSLF
Sbjct: 1   MLLSIPPNGQSIPVEIKHETFHARQSGLLHLLSNCTDLSRLKQIHAQALRTFSTHKSSLF 60

Query: 61  IFTRILSVSSSTDFDYARRVFHQIHPPNSFMWNTLIAACARSFDRKEQAIELFCRMLEQG 120
           +F+RIL VSS TDF+YA RVF QI  PNSFMWNTLI ACARS DRK+QAIELF RMLE+G
Sbjct: 61  LFSRILHVSSLTDFEYALRVFDQIDSPNSFMWNTLIGACARSLDRKKQAIELFYRMLEEG 120

Query: 121 LAEPDKHTFPFLLKACAYLFALSEGRQAHGYVVKLGLDSDVYVGNSLIHFYASCGCLSLA 180
             EPDKHTFPFLLKACAY+FALSEGRQAH ++VK GLDSDVYVGNSLIH YASCGCLSLA
Sbjct: 121 SVEPDKHTFPFLLKACAYVFALSEGRQAHAHIVKRGLDSDVYVGNSLIHLYASCGCLSLA 180

Query: 181 LKVFDKMPHRSLVSWNVMIEGYVQCGLFENALKLFDEMQTAFEPDGYTIQSVIGACAGIG 240
           LKVF++MPHRSLVSWNVMI+ YVQ GLFENALKLF EMQ  FEPDGYT+QS+I ACAGIG
Sbjct: 181 LKVFEQMPHRSLVSWNVMIDAYVQRGLFENALKLFAEMQDTFEPDGYTMQSIISACAGIG 240

Query: 241 ALSLGMWAHAYVLRKADGAMARDVLINSSLVDMYSKCGSLRMAQQVFETMPKHDLNSWNS 300
           ALSLGMW+HAYVLR+  GAMA +VLINSSLVDMYSKCGSLRMAQQVFETMPK DLNSWNS
Sbjct: 241 ALSLGMWSHAYVLRRTGGAMAGEVLINSSLVDMYSKCGSLRMAQQVFETMPKRDLNSWNS 300

Query: 301 MILALAMHGQAVAALQCFSRLVEIGQFRPNSVTFVGVLSACNHRGMVAEGRKYFDMMINE 360
           MILALAMHG+A AAL CFSRLVE  +F PNSVTFVGVLSACNHRGMV EGRKYFDMM+NE
Sbjct: 301 MILALAMHGRAEAALGCFSRLVETEKFLPNSVTFVGVLSACNHRGMVTEGRKYFDMMVNE 360

Query: 361 YKIEPRLEHYGCLVDLLCRSGFFDEALELVTDMKIKPDAVIWRTLLDACYKQNAGVELSD 420
           YKI PRLEHYGCLVDLL RSGF DEALELVT+M IKPDAVIWR+LLDACYKQNAGVELS+
Sbjct: 361 YKIVPRLEHYGCLVDLLSRSGFIDEALELVTNMHIKPDAVIWRSLLDACYKQNAGVELSE 420

Query: 421 EVALQILQSETTASSGVYVLLSRVYASARQWNNVGLIRKAMTEKGVTKEAGCSLIEIDGI 480
           EVALQILQSETTASSGVYVLLSRVYASA +WN+VGL+RKAM +KGV KE GCS IEIDG+
Sbjct: 421 EVALQILQSETTASSGVYVLLSRVYASAHRWNDVGLVRKAMADKGVAKEPGCSSIEIDGV 480

Query: 481 SHEFFAGDTSHPHIKKIYEVIDLIEEKLEKDGYSPDYSQATMVDEPDNVKRQSLRSHSER 540
           SHEFFAGDTSHP IK+IY VIDLIEEKL+K GYSPDYSQATMVD+PD VKRQSL+ HSER
Sbjct: 481 SHEFFAGDTSHPKIKEIYAVIDLIEEKLQKHGYSPDYSQATMVDDPDTVKRQSLKLHSER 540

Query: 541 LAIAFGLLNLKPGMPIRIFKNLRVCNDCHQVTKSISRIFNVEIITRDRNRFHHFKNGTCS 600
            AIAFGLLNLKPGMPIRIFKNLRVCNDCHQVTK ISRIFNVEII RDRNRFHHF+NG CS
Sbjct: 541 FAIAFGLLNLKPGMPIRIFKNLRVCNDCHQVTKLISRIFNVEIIMRDRNRFHHFENGMCS 600

BLAST of Sed0027533 vs. ExPASy TrEMBL
Match: A0A1S3BE78 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial OS=Cucumis melo OX=3656 GN=LOC103489069 PE=3 SV=1)

HSP 1 Score: 1023.5 bits (2645), Expect = 3.6e-295
Identity = 504/605 (83.31%), Postives = 538/605 (88.93%), Query Frame = 0

Query: 1   MLLPIPPNPNSIPIQI------NHQTHLLQLLSDCTDFSKLKQIHAQAIRTLSPHKSSLF 60
           MLL IPPN  S PI+I       HQ+ LL LL+DCTD SKLKQIHAQAIR  S HKSSLF
Sbjct: 7   MLLAIPPNSQSFPIEIKRETFNTHQSRLLHLLTDCTDLSKLKQIHAQAIRNFSTHKSSLF 66

Query: 61  IFTRILSVSSSTDFDYARRVFHQIHPPNSFMWNTLIAACARSFDRKEQAIELFCRMLEQG 120
           +++RIL VSS  DFDYA RVF+QI  PNSFMWNTLI ACARS DRKEQAIE+F RMLE+G
Sbjct: 67  LYSRILHVSSLIDFDYACRVFNQIGNPNSFMWNTLIGACARSLDRKEQAIEIFYRMLEEG 126

Query: 121 LAEPDKHTFPFLLKACAYLFALSEGRQAHGYVVKLGLDSDVYVGNSLIHFYASCGCLSLA 180
             EPDKHTFPFLLKACAY+FALSEGRQAH ++ KLGLD DVYVGNSLIH YASCGCLS+A
Sbjct: 127 SVEPDKHTFPFLLKACAYVFALSEGRQAHAHIFKLGLDLDVYVGNSLIHLYASCGCLSMA 186

Query: 181 LKVFDKMPHRSLVSWNVMIEGYVQCGLFENALKLFDEMQTAFEPDGYTIQSVIGACAGIG 240
           LKVF+KMP RSLVSWNVMI+ YVQCGLFENALKLF EMQ +FEPDGYT+QS+I ACAGIG
Sbjct: 187 LKVFEKMPLRSLVSWNVMIDAYVQCGLFENALKLFFEMQNSFEPDGYTMQSIISACAGIG 246

Query: 241 ALSLGMWAHAYVLRKADGAMARDVLINSSLVDMYSKCGSLRMAQQVFETMPKHDLNSWNS 300
           ALSLGMWAHAYVLRKA GAMA DVLINSSLVDMYSKCGSLRMAQQVFETMPKHDLNSWNS
Sbjct: 247 ALSLGMWAHAYVLRKAGGAMAGDVLINSSLVDMYSKCGSLRMAQQVFETMPKHDLNSWNS 306

Query: 301 MILALAMHGQAVAALQCFSRLVEIGQFRPNSVTFVGVLSACNHRGMVAEGRKYFDMMINE 360
           MILALAMHG   AALQCFSRLVE+  F PNSVTFVGVLSACNHRGMVA+GRKYFDMM+NE
Sbjct: 307 MILALAMHGLGEAALQCFSRLVEMEIFLPNSVTFVGVLSACNHRGMVADGRKYFDMMVNE 366

Query: 361 YKIEPRLEHYGCLVDLLCRSGFFDEALELVTDMKIKPDAVIWRTLLDACYKQNAGVELSD 420
           YKIEPRLEHYGCLVDLL RSGF DEALELV +M IKPDAVIWR+LLDACYKQNAGVELS+
Sbjct: 367 YKIEPRLEHYGCLVDLLSRSGFIDEALELVANMHIKPDAVIWRSLLDACYKQNAGVELSE 426

Query: 421 EVALQILQSETTASSGVYVLLSRVYASARQWNNVGLIRKAMTEKGVTKEAGCSLIEIDGI 480
           EVA +ILQSE T SSGVYVLLSRVYASARQWN+VG+IRK MT+ GVTKE GCS IEIDGI
Sbjct: 427 EVAFKILQSEKTVSSGVYVLLSRVYASARQWNDVGIIRKVMTDMGVTKEPGCSSIEIDGI 486

Query: 481 SHEFFAGDTSHPHIKKIYEVIDLIEEKLEKDGYSPDYSQATMVDEPDNVKRQSLRSHSER 540
           SHEFFAGDTSHP IK+IY VIDLIEEKLEK GYSPD SQATMVDEPD +K+QSL+ HSER
Sbjct: 487 SHEFFAGDTSHPRIKEIYGVIDLIEEKLEKHGYSPDCSQATMVDEPDYIKQQSLKLHSER 546

Query: 541 LAIAFGLLNLKPGMPIRIFKNLRVCNDCHQVTKSISRIFNVEIITRDRNRFHHFKNGTCS 600
           LAIAFGLLNLKPG P+RIFKNLRVCNDCHQVTK IS IFNVEII RDRNRFHHFK+G CS
Sbjct: 547 LAIAFGLLNLKPGTPVRIFKNLRVCNDCHQVTKLISEIFNVEIIMRDRNRFHHFKHGMCS 606

BLAST of Sed0027533 vs. ExPASy TrEMBL
Match: A0A6J1DAJ2 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial OS=Momordica charantia OX=3673 GN=LOC111019179 PE=3 SV=1)

HSP 1 Score: 1013.8 bits (2620), Expect = 2.9e-292
Identity = 496/605 (81.98%), Postives = 541/605 (89.42%), Query Frame = 0

Query: 1   MLLPIPPNPNSIPIQI------NHQTHLLQLLSDCTDFSKLKQIHAQAIRTLSPHKSSLF 60
           MLL IPP   SI ++        HQ+ LLQLLS CTD S+LK+IHA+A+R+ S H+SSLF
Sbjct: 1   MLLAIPPIAQSIAVEFKHDTFRTHQSRLLQLLSHCTDLSQLKKIHARALRSFSTHESSLF 60

Query: 61  IFTRILSVSSSTDFDYARRVFHQIHPPNSFMWNTLIAACARSFDRKEQAIELFCRMLEQG 120
           +F+RIL VSS  DFDYA RVF +I  PNSFMWNTLI ACARSFDRKEQAI LF RMLE+G
Sbjct: 61  LFSRILHVSSLIDFDYACRVFDRIDNPNSFMWNTLIGACARSFDRKEQAILLFYRMLEEG 120

Query: 121 LAEPDKHTFPFLLKACAYLFALSEGRQAHGYVVKLGLDSDVYVGNSLIHFYASCGCLSLA 180
             EPDKHTFPFLLKACAY+FALSEG+QAH ++VKLGLDSDVYVGNSLIH YASCGCL+ A
Sbjct: 121 SVEPDKHTFPFLLKACAYVFALSEGKQAHAHIVKLGLDSDVYVGNSLIHLYASCGCLNFA 180

Query: 181 LKVFDKMPHRSLVSWNVMIEGYVQCGLFENALKLFDEMQTAFEPDGYTIQSVIGACAGIG 240
           LK+F+KMP RSLVSWNV I+ +VQCGLFENALKLF EMQ  FEPDGYT+QSVI ACAGIG
Sbjct: 181 LKLFEKMPKRSLVSWNVTIDAFVQCGLFENALKLFVEMQDVFEPDGYTMQSVISACAGIG 240

Query: 241 ALSLGMWAHAYVLRKADGAMARDVLINSSLVDMYSKCGSLRMAQQVFETMPKHDLNSWNS 300
           ALSLGMWAHAYVLRKA GAM+ DVLINSSLVDMYSKCGSLRMAQ+VFETMPKHDLNSWNS
Sbjct: 241 ALSLGMWAHAYVLRKAGGAMSADVLINSSLVDMYSKCGSLRMAQEVFETMPKHDLNSWNS 300

Query: 301 MILALAMHGQAVAALQCFSRLVEIGQFRPNSVTFVGVLSACNHRGMVAEGRKYFDMMINE 360
           MIL LAMHG+A +AL+CFSRLV++ QF PNSVTFVGVLSACNHRGMVAEGRKYFDMM+NE
Sbjct: 301 MILGLAMHGRAESALRCFSRLVKMKQFLPNSVTFVGVLSACNHRGMVAEGRKYFDMMVNE 360

Query: 361 YKIEPRLEHYGCLVDLLCRSGFFDEALELVTDMKIKPDAVIWRTLLDACYKQNAGVELSD 420
           YKIEPRLEHYGCLVDLL RSGF DEALELV +M IKPDAVIWR+LLDAC KQNAGVELS+
Sbjct: 361 YKIEPRLEHYGCLVDLLSRSGFIDEALELVANMHIKPDAVIWRSLLDACCKQNAGVELSE 420

Query: 421 EVALQILQSETTASSGVYVLLSRVYASARQWNNVGLIRKAMTEKGVTKEAGCSLIEIDGI 480
           EVALQIL+SE  ASSGVYVLLS+VYASA QWN+ GL+RKAM ++GV KE GCSLIE+DGI
Sbjct: 421 EVALQILESEKAASSGVYVLLSKVYASACQWNDAGLVRKAMADQGVAKEPGCSLIEVDGI 480

Query: 481 SHEFFAGDTSHPHIKKIYEVIDLIEEKLEKDGYSPDYSQATMVDEPDNVKRQSLRSHSER 540
           SHEFFAGD SHP IK+IY+VIDLIEEKLEKDGYSPDYSQATMVDEPDNVK+QSLR HSER
Sbjct: 481 SHEFFAGDASHPKIKEIYDVIDLIEEKLEKDGYSPDYSQATMVDEPDNVKQQSLRLHSER 540

Query: 541 LAIAFGLLNLKPGMPIRIFKNLRVCNDCHQVTKSISRIFNVEIITRDRNRFHHFKNGTCS 600
           LAIAFGLLN+KPGMPIRIFKNLRVCNDCHQVTKSISRIFNVEII RDRNRFHH KNG CS
Sbjct: 541 LAIAFGLLNMKPGMPIRIFKNLRVCNDCHQVTKSISRIFNVEIIMRDRNRFHHVKNGLCS 600

BLAST of Sed0027533 vs. ExPASy TrEMBL
Match: A0A0A0KTV7 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G604120 PE=3 SV=1)

HSP 1 Score: 1012.3 bits (2616), Expect = 8.4e-292
Identity = 496/605 (81.98%), Postives = 536/605 (88.60%), Query Frame = 0

Query: 1   MLLPIPPNPNSIPIQI------NHQTHLLQLLSDCTDFSKLKQIHAQAIRTLSPHKSSLF 60
           MLL IP N  S+PI+I       HQ+  L LL+DCTD SKLKQIHAQAIR  S H SSLF
Sbjct: 1   MLLAIPTNSQSLPIEIKGENSKTHQSRFLHLLTDCTDLSKLKQIHAQAIRNFSTHNSSLF 60

Query: 61  IFTRILSVSSSTDFDYARRVFHQIHPPNSFMWNTLIAACARSFDRKEQAIELFCRMLEQG 120
           +++RIL VSS  DFDYA RVF+QI  PNSFMWNTLI ACARS DRKEQAIE+F RMLE+G
Sbjct: 61  LYSRILHVSSLIDFDYACRVFNQIDNPNSFMWNTLIGACARSLDRKEQAIEIFYRMLEEG 120

Query: 121 LAEPDKHTFPFLLKACAYLFALSEGRQAHGYVVKLGLDSDVYVGNSLIHFYASCGCLSLA 180
             EPDKHTFPFLLKACAY+FALSEGRQAH  + KLGLD DVYVGNSLIH YASCGCLS+A
Sbjct: 121 SVEPDKHTFPFLLKACAYVFALSEGRQAHAQIFKLGLDLDVYVGNSLIHLYASCGCLSMA 180

Query: 181 LKVFDKMPHRSLVSWNVMIEGYVQCGLFENALKLFDEMQTAFEPDGYTIQSVIGACAGIG 240
           LKVF+KMP RSLVSWNVMI+ YVQ GLFENALKLF EMQ +FEPDGYT+QS++ ACAGIG
Sbjct: 181 LKVFEKMPLRSLVSWNVMIDAYVQSGLFENALKLFVEMQNSFEPDGYTMQSIVSACAGIG 240

Query: 241 ALSLGMWAHAYVLRKADGAMARDVLINSSLVDMYSKCGSLRMAQQVFETMPKHDLNSWNS 300
           ALSLGMWAHAYVLRKA GAMA DVLINSSLVDMYSKCGSLRMAQQVFETMPKHDLNSWNS
Sbjct: 241 ALSLGMWAHAYVLRKASGAMAGDVLINSSLVDMYSKCGSLRMAQQVFETMPKHDLNSWNS 300

Query: 301 MILALAMHGQAVAALQCFSRLVEIGQFRPNSVTFVGVLSACNHRGMVAEGRKYFDMMINE 360
           MILALAMHG+  AALQCFSRLVE+ +F PNSVTFVGVLSACNH GMVA+GRKYFDMM+N+
Sbjct: 301 MILALAMHGRGQAALQCFSRLVEMEKFLPNSVTFVGVLSACNHGGMVADGRKYFDMMVND 360

Query: 361 YKIEPRLEHYGCLVDLLCRSGFFDEALELVTDMKIKPDAVIWRTLLDACYKQNAGVELSD 420
           YKIEPRLEHYGCLVDLL RSGF DEALELV +M IKPDAVIWR+LLDACYKQNAGVELS+
Sbjct: 361 YKIEPRLEHYGCLVDLLSRSGFIDEALELVANMHIKPDAVIWRSLLDACYKQNAGVELSE 420

Query: 421 EVALQILQSETTASSGVYVLLSRVYASARQWNNVGLIRKAMTEKGVTKEAGCSLIEIDGI 480
           EVA +ILQSE T SSGVYV+LSRVYASARQWN+VG+IRK MT+ GVTKE GCS IEIDGI
Sbjct: 421 EVAFKILQSEKTISSGVYVMLSRVYASARQWNDVGIIRKVMTDMGVTKEPGCSSIEIDGI 480

Query: 481 SHEFFAGDTSHPHIKKIYEVIDLIEEKLEKDGYSPDYSQATMVDEPDNVKRQSLRSHSER 540
           SHEFFAGDTSHP IK+IY VIDLIEEKLE+ GYSPD SQATMVDEPDN+K+QSL+ HSER
Sbjct: 481 SHEFFAGDTSHPRIKEIYGVIDLIEEKLERRGYSPDCSQATMVDEPDNIKQQSLKLHSER 540

Query: 541 LAIAFGLLNLKPGMPIRIFKNLRVCNDCHQVTKSISRIFNVEIITRDRNRFHHFKNGTCS 600
           LAIAFGLLNLKPG P+RIFKNLRVCNDCHQVTK IS IFNVEII RDRNRFHHFK+G CS
Sbjct: 541 LAIAFGLLNLKPGTPVRIFKNLRVCNDCHQVTKLISEIFNVEIIMRDRNRFHHFKHGMCS 600

BLAST of Sed0027533 vs. TAIR 10
Match: AT1G59720.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 741.9 bits (1914), Expect = 4.1e-214
Identity = 358/593 (60.37%), Postives = 451/593 (76.05%), Query Frame = 0

Query: 17  NHQTHLLQLLSDCTDFSKLKQIHAQAIRTLSPHK-SSLFIFTRILSVSSS-TDFDYARRV 76
           NH   +  L   C+D S+LKQ+HA  +RT  P + ++LF++ +IL +SSS +D +YA RV
Sbjct: 46  NHHQRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRV 105

Query: 77  FHQIHPPNSFMWNTLIAACARSFDRKEQAIELFCRMLEQGLAEPDKHTFPFLLKACAYLF 136
           F  I   +SFMWNTLI ACA    RKE+A  L+ +MLE+G + PDKHTFPF+LKACAY+F
Sbjct: 106 FDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIF 165

Query: 137 ALSEGRQAHGYVVKLGLDSDVYVGNSLIHFYASCGCLSLALKVFDKMPHRSLVSWNVMIE 196
             SEG+Q H  +VK G   DVYV N LIH Y SCGCL LA KVFD+MP RSLVSWN MI+
Sbjct: 166 GFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMID 225

Query: 197 GYVQCGLFENALKLFDEMQTAFEPDGYTIQSVIGACAGIGALSLGMWAHAYVLRKADGAM 256
             V+ G +++AL+LF EMQ +FEPDGYT+QSV+ ACAG+G+LSLG WAHA++LRK D  +
Sbjct: 226 ALVRFGEYDSALQLFREMQRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDV 285

Query: 257 ARDVLINSSLVDMYSKCGSLRMAQQVFETMPKHDLNSWNSMILALAMHGQAVAALQCFSR 316
           A DVL+ +SL++MY KCGSLRMA+QVF+ M K DL SWN+MIL  A HG+A  A+  F R
Sbjct: 286 AMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDR 345

Query: 317 LVEIGQ-FRPNSVTFVGVLSACNHRGMVAEGRKYFDMMINEYKIEPRLEHYGCLVDLLCR 376
           +V+  +  RPNSVTFVG+L ACNHRG V +GR+YFDMM+ +Y IEP LEHYGC+VDL+ R
Sbjct: 346 MVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIAR 405

Query: 377 SGFFDEALELVTDMKIKPDAVIWRTLLDACYKQNAGVELSDEVALQIL------QSETTA 436
           +G+  EA+++V  M +KPDAVIWR+LLDAC K+ A VELS+E+A  I+      +S    
Sbjct: 406 AGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGN 465

Query: 437 SSGVYVLLSRVYASARQWNNVGLIRKAMTEKGVTKEAGCSLIEIDGISHEFFAGDTSHPH 496
            SG YVLLSRVYASA +WN+VG++RK M+E G+ KE GCS IEI+GISHEFFAGDTSHP 
Sbjct: 466 CSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQ 525

Query: 497 IKKIYEVIDLIEEKLEKDGYSPDYSQATMVDEP-DNVKRQSLRSHSERLAIAFGLLNLKP 556
            K+IY+ + +I+++L   GY PD SQA +VD   D  K  SLR HSERLAIAFGL+NL P
Sbjct: 526 TKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLPP 585

Query: 557 GMPIRIFKNLRVCNDCHQVTKSISRIFNVEIITRDRNRFHHFKNGTCSCMDFW 600
             PIRIFKNLRVCNDCH+VTK IS++FN EII RDR RFHHFK+G+CSC+D+W
Sbjct: 586 QTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638

BLAST of Sed0027533 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 466.1 bits (1198), Expect = 4.3e-131
Identity = 236/554 (42.60%), Postives = 351/554 (63.36%), Query Frame = 0

Query: 47  SPHKSSLFIFTRILSVSSSTDFDYARRVFHQIHPPNSFMWNTLIAACARSFDRKEQAIEL 106
           SPH+  +     I   +S    + A+++F +I   +   WN +I+  A + + KE A+EL
Sbjct: 195 SPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKE-ALEL 254

Query: 107 FCRMLEQGLAEPDKHTFPFLLKACAYLFALSEGRQAHGYVVKLGLDSDVYVGNSLIHFYA 166
           F  M++  +  PD+ T   ++ ACA   ++  GRQ H ++   G  S++ + N+LI  Y+
Sbjct: 255 FKDMMKTNV-RPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYS 314

Query: 167 SCGCLSLALKVFDKMPHRSLVSWNVMIEGYVQCGLFENALKLFDEMQTAFE-PDGYTIQS 226
            CG L  A  +F+++P++ ++SWN +I GY    L++ AL LF EM  + E P+  T+ S
Sbjct: 315 KCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLS 374

Query: 227 VIGACAGIGALSLGMWAHAYVLRKADGAMARDVLINSSLVDMYSKCGSLRMAQQVFETMP 286
           ++ ACA +GA+ +G W H Y+ ++  G      L  +SL+DMY+KCG +  A QVF ++ 
Sbjct: 375 ILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSL-RTSLIDMYAKCGDIEAAHQVFNSIL 434

Query: 287 KHDLNSWNSMILALAMHGQAVAALQCFSRLVEIGQFRPNSVTFVGVLSACNHRGMVAEGR 346
              L+SWN+MI   AMHG+A A+   FSR+ +IG  +P+ +TFVG+LSAC+H GM+  GR
Sbjct: 435 HKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIG-IQPDDITFVGLLSACSHSGMLDLGR 494

Query: 347 KYFDMMINEYKIEPRLEHYGCLVDLLCRSGFFDEALELVTDMKIKPDAVIWRTLLDACYK 406
             F  M  +YK+ P+LEHYGC++DLL  SG F EA E++  M+++PD VIW +LL AC K
Sbjct: 495 HIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKAC-K 554

Query: 407 QNAGVELSDEVALQILQSETTASSGVYVLLSRVYASARQWNNVGLIRKAMTEKGVTKEAG 466
            +  VEL +  A  +++ E   + G YVLLS +YASA +WN V   R  + +KG+ K  G
Sbjct: 555 MHGNVELGESFAENLIKIE-PENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPG 614

Query: 467 CSLIEIDGISHEFFAGDTSHPHIKKIYEVIDLIEEKLEKDGYSPDYSQATMVDEPDNVKR 526
           CS IEID + HEF  GD  HP  ++IY +++ +E  LEK G+ PD S+  + +  +  K 
Sbjct: 615 CSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSE-VLQEMEEEWKE 674

Query: 527 QSLRSHSERLAIAFGLLNLKPGMPIRIFKNLRVCNDCHQVTKSISRIFNVEIITRDRNRF 586
            +LR HSE+LAIAFGL++ KPG  + I KNLRVC +CH+ TK IS+I+  EII RDR RF
Sbjct: 675 GALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRF 734

Query: 587 HHFKNGTCSCMDFW 600
           HHF++G CSC D+W
Sbjct: 735 HHFRDGVCSCNDYW 741

BLAST of Sed0027533 vs. TAIR 10
Match: AT4G21065.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 466.1 bits (1198), Expect = 4.3e-131
Identity = 245/575 (42.61%), Postives = 352/575 (61.22%), Query Frame = 0

Query: 30  TDFSKLKQIHAQAIR---TLSPHKSSLFIFTRILSVSSSTDFDYARRVFHQIHPP-NSFM 89
           +  +KL+QIHA +IR   ++S  +    +   ++S+ S     YA +VF +I  P N F+
Sbjct: 28  SSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFI 87

Query: 90  WNTLIAACARSFDRKEQAIELFCRMLEQGLAEPDKHTFPFLLKACAYLFALSEGRQAHGY 149
           WNTLI   A        A  L+  M   GL EPD HT+PFL+KA   +  +  G   H  
Sbjct: 88  WNTLIRGYA-EIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSV 147

Query: 150 VVKLGLDSDVYVGNSLIHFYASCGCLSLALKVFDKMPHRSLVSWNVMIEGYVQCGLFENA 209
           V++ G  S +YV NSL+H YA+CG ++ A KVFDKMP + LV+WN +I G+ + G  E A
Sbjct: 148 VIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEA 207

Query: 210 LKLFDEMQT-AFEPDGYTIQSVIGACAGIGALSLGMWAHAYVLRKADGAMARDVLINSSL 269
           L L+ EM +   +PDG+TI S++ ACA IGAL+LG   H Y+++     + R++  ++ L
Sbjct: 208 LALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV---GLTRNLHSSNVL 267

Query: 270 VDMYSKCGSLRMAQQVFETMPKHDLNSWNSMILALAMHGQAVAALQCFSRLVEIGQFRPN 329
           +D+Y++CG +  A+ +F+ M   +  SW S+I+ LA++G    A++ F  +       P 
Sbjct: 268 LDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPC 327

Query: 330 SVTFVGVLSACNHRGMVAEGRKYFDMMINEYKIEPRLEHYGCLVDLLCRSGFFDEALELV 389
            +TFVG+L AC+H GMV EG +YF  M  EYKIEPR+EH+GC+VDLL R+G   +A E +
Sbjct: 328 EITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYI 387

Query: 390 TDMKIKPDAVIWRTLLDACYKQNAGVELSDEVALQILQSETTASSGVYVLLSRVYASARQ 449
             M ++P+ VIWRTLL AC   +   +L++   +QILQ E    SG YVLLS +YAS ++
Sbjct: 388 KSMPMQPNVVIWRTLLGAC-TVHGDSDLAEFARIQILQLEPN-HSGDYVLLSNMYASEQR 447

Query: 450 WNNVGLIRKAMTEKGVTKEAGCSLIEIDGISHEFFAGDTSHPHIKKIYEVIDLIEEKLEK 509
           W++V  IRK M   GV K  G SL+E+    HEF  GD SHP    IY  +  +  +L  
Sbjct: 448 WSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRS 507

Query: 510 DGYSPDYSQATMVDEPDNVKRQSLRSHSERLAIAFGLLNLKPGMPIRIFKNLRVCNDCHQ 569
           +GY P  S    VD  +  K  ++  HSE++AIAF L++     PI + KNLRVC DCH 
Sbjct: 508 EGYVPQISN-VYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHL 567

Query: 570 VTKSISRIFNVEIITRDRNRFHHFKNGTCSCMDFW 600
             K +S+++N EI+ RDR+RFHHFKNG+CSC D+W
Sbjct: 568 AIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595

BLAST of Sed0027533 vs. TAIR 10
Match: AT5G48910.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 466.1 bits (1198), Expect = 4.3e-131
Identity = 256/645 (39.69%), Postives = 362/645 (56.12%), Query Frame = 0

Query: 8   NPNSIPIQINHQTHLLQLLSDCTDFSKLKQIHAQAIR------TLSPHKSSLFIFTRILS 67
           +P S P   +H + L   +++C     L QIHA  I+      TL+  +   F  T  L 
Sbjct: 14  SPASSP--ASHPSSLFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDL- 73

Query: 68  VSSSTDFDYARRVFHQIHPPNSFMWNTLIAACARSFDRKEQ-AIELFCRMLEQGLAEPDK 127
                D DYA ++F+Q+   N F WNT+I   + S + K   AI LF  M+     EP++
Sbjct: 74  --HHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNR 133

Query: 128 HTFPFLLKACAYLFALSEGRQAHGYVVKLGLDSDVYVGNSLIHFYASCGCL--------- 187
            TFP +LKACA    + EG+Q HG  +K G   D +V ++L+  Y  CG +         
Sbjct: 134 FTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYK 193

Query: 188 ------------------------------------SLALKVFDKMPHRSLVSWNVMIEG 247
                                                 A  +FDKM  RS+VSWN MI G
Sbjct: 194 NIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISG 253

Query: 248 YVQCGLFENALKLFDEMQTA-FEPDGYTIQSVIGACAGIGALSLGMWAHAYVLRKADGAM 307
           Y   G F++A+++F EM+     P+  T+ SV+ A + +G+L LG W H Y     D  +
Sbjct: 254 YSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYA---EDSGI 313

Query: 308 ARDVLINSSLVDMYSKCGSLRMAQQVFETMPKHDLNSWNSMILALAMHGQAVAALQCFSR 367
             D ++ S+L+DMYSKCG +  A  VFE +P+ ++ +W++MI   A+HGQA  A+ CF +
Sbjct: 314 RIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCK 373

Query: 368 LVEIGQFRPNSVTFVGVLSACNHRGMVAEGRKYFDMMINEYKIEPRLEHYGCLVDLLCRS 427
           + + G  RP+ V ++ +L+AC+H G+V EGR+YF  M++   +EPR+EHYGC+VDLL RS
Sbjct: 374 MRQAG-VRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRS 433

Query: 428 GFFDEALELVTDMKIKPDAVIWRTLLDACYKQNAGVELSDEVALQILQSETTASSGVYVL 487
           G  DEA E + +M IKPD VIW+ LL AC +    VE+   VA  IL       SG YV 
Sbjct: 434 GLLDEAEEFILNMPIKPDDVIWKALLGAC-RMQGNVEMGKRVA-NILMDMVPHDSGAYVA 493

Query: 488 LSRVYASARQWNNVGLIRKAMTEKGVTKEAGCSLIEIDGISHEFFAGDTSHPHIKKIYEV 547
           LS +YAS   W+ V  +R  M EK + K+ GCSLI+IDG+ HEF   D SHP  K+I  +
Sbjct: 494 LSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSM 553

Query: 548 IDLIEEKLEKDGYSPDYSQATMVDEPDNVKRQSLRSHSERLAIAFGLLNLKPGMPIRIFK 600
           +  I +KL   GY P  +Q  +  E ++ K   L  HSE++A AFGL++  PG PIRI K
Sbjct: 554 LVEISDKLRLAGYRPITTQVLLNLEEED-KENVLHYHSEKIATAFGLISTSPGKPIRIVK 613

BLAST of Sed0027533 vs. TAIR 10
Match: AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 444.1 bits (1141), Expect = 1.8e-124
Identity = 239/627 (38.12%), Postives = 360/627 (57.42%), Query Frame = 0

Query: 8   NPNSIPIQINHQTH-LLQLLSDCTDFSKLKQIHAQAIRT-LSPHKSSLFIFTRILSVSSS 67
           N  S    + H  +  +  L  C+   +LKQIHA+ ++T L     ++  F      S+S
Sbjct: 2   NVISCSFSLEHNLYETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTS 61

Query: 68  TDF-DYARRVFHQIHPPNSFMWNTLIAACARSFDRKEQAIELFCRMLEQGLAEPDKHTFP 127
           +DF  YA+ VF     P++F+WN +I   + S D  E+++ L+ RML    A  + +TFP
Sbjct: 62  SDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCS-DEPERSLLLYQRMLCSS-APHNAYTFP 121

Query: 128 FLLKACAYLFALSEGRQAHGYVVKLGLDSDVYVGNSLIHFYA------------------ 187
            LLKAC+ L A  E  Q H  + KLG ++DVY  NSLI+ YA                  
Sbjct: 122 SLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEP 181

Query: 188 -------------SCGCLSLALKVFDKMPHRSLVSWNVMIEGYVQCGLFENALKLFDEMQ 247
                          G + +AL +F KM  ++ +SW  MI GYVQ  + + AL+LF EMQ
Sbjct: 182 DDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQ 241

Query: 248 TA-FEPDGYTIQSVIGACAGIGALSLGMWAHAYVLRKADGAMARDVLINSSLVDMYSKCG 307
            +  EPD  ++ + + ACA +GAL  G W H+Y+ +     +  D ++   L+DMY+KCG
Sbjct: 242 NSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKT---RIRMDSVLGCVLIDMYAKCG 301

Query: 308 SLRMAQQVFETMPKHDLNSWNSMILALAMHGQAVAALQCFSRLVEIGQFRPNSVTFVGVL 367
            +  A +VF+ + K  + +W ++I   A HG    A+  F  + ++G  +PN +TF  VL
Sbjct: 302 EMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMG-IKPNVITFTAVL 361

Query: 368 SACNHRGMVAEGRKYFDMMINEYKIEPRLEHYGCLVDLLCRSGFFDEALELVTDMKIKPD 427
           +AC++ G+V EG+  F  M  +Y ++P +EHYGC+VDLL R+G  DEA   + +M +KP+
Sbjct: 362 TACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPN 421

Query: 428 AVIWRTLLDACYKQNAGVELSDEVALQILQSETTASSGVYVLLSRVYASARQWNNVGLIR 487
           AVIW  LL AC + +  +EL +E+  +IL +      G YV  + ++A  ++W+     R
Sbjct: 422 AVIWGALLKAC-RIHKNIELGEEIG-EILIAIDPYHGGRYVHKANIHAMDKKWDKAAETR 481

Query: 488 KAMTEKGVTKEAGCSLIEIDGISHEFFAGDTSHPHIKKIYEVIDLIEEKLEKDGYSPDYS 547
           + M E+GV K  GCS I ++G +HEF AGD SHP I+KI     ++  KLE++GY P+  
Sbjct: 482 RLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELE 541

Query: 548 QATMVDEPDNVKRQSLRSHSERLAIAFGLLNLKPGMPIRIFKNLRVCNDCHQVTKSISRI 600
           +  +    D+ +   +  HSE+LAI +GL+  KPG  IRI KNLRVC DCH+VTK IS+I
Sbjct: 542 EMLLDLVDDDEREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKI 601

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_023537748.12.1e-29783.47pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri... [more]
XP_022957211.12.3e-29683.14pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri... [more]
KAG7032179.12.3e-29683.14Pentatricopeptide repeat-containing protein, chloroplastic/mitochondrial [Cucurb... [more]
XP_038892628.13.1e-29683.14pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri... [more]
XP_022998351.15.2e-29683.31pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri... [more]
Match NameE-valueIdentityDescription
Q0WQW55.7e-21360.37Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri... [more]
A8MQA36.1e-13042.61Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX... [more]
Q9FI806.1e-13039.69Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX... [more]
Q9LN016.1e-13042.60Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
Q9FJY72.5e-12338.12Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A6J1GYL51.1e-29683.14pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri... [more]
A0A6J1KA082.5e-29683.31pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri... [more]
A0A1S3BE783.6e-29583.31pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri... [more]
A0A6J1DAJ22.9e-29281.98pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri... [more]
A0A0A0KTV78.4e-29281.98DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G6041... [more]
Match NameE-valueIdentityDescription
AT1G59720.14.1e-21460.37Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G08070.14.3e-13142.60Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G21065.14.3e-13142.61Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G48910.14.3e-13139.69Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G66520.11.8e-12438.12Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 326..353
e-value: 0.98
score: 9.8
coord: 363..388
e-value: 0.001
score: 19.2
coord: 159..184
e-value: 0.0031
score: 17.7
coord: 262..287
e-value: 0.038
score: 14.3
coord: 291..319
e-value: 0.0081
score: 16.3
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 81..131
e-value: 1.3E-8
score: 34.9
coord: 186..231
e-value: 4.2E-10
score: 39.7
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 85..116
e-value: 4.5E-4
score: 18.2
coord: 364..388
e-value: 9.5E-4
score: 17.2
coord: 187..214
e-value: 8.6E-7
score: 26.8
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 257..291
score: 8.6266
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 82..117
score: 10.621557
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 185..215
score: 10.709248
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 465..589
e-value: 3.2E-35
score: 120.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 249..489
e-value: 1.6E-39
score: 138.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 140..237
e-value: 3.3E-22
score: 80.7
coord: 16..139
e-value: 1.0E-12
score: 49.8
NoneNo IPR availablePANTHERPTHR47925:SF96BNAC04G18690D PROTEINcoord: 17..540
NoneNo IPR availablePANTHERPTHR47925OS01G0913400 PROTEIN-RELATEDcoord: 17..540

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0027533.1Sed0027533.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding