Sed0027528 (gene) Chayote v1

Overview


Name	Sed0027528
Type	gene
Organism	Sechium edule (Chayote v1)
Description	beta-carotene isomerase D27, chloroplastic
Location	LG05: 385121 .. 388861 (-)
RNA-Seq Expression	Sed0027528
Synteny	Sed0027528

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGCAAAACTTATTCAAGAAAGGAGTGTCATTTTGGCAAATTGGCCAAACTTGAGGGGCAAGAACAAAAGAGAGTTGAGGAGGAAAAGCAATTCTTGTGTTGTTGCAGTGCTCACAAGACCAGCAGAGAGTGGAGTAGTAAATGAAGACACAAGAAAGGCCAACACTGTTTATAGAGACAACTGGTTTGATAAATTAGCCATTGATTATCTATCTCAGGCAGTACAGGCAACTTTAGGTGATTGAATTTTAGTTGCTGTTTTTTTTGGAAGATTAATTTGGAGAAGGGGGGGTAAAGTGGTAAATAAGATGAAATGTTTGTGCAGGTTGGAGAAGCAAAAAGAGTGGATATGAAAGCTTGGTGGATGTGGCAACAATGGCGTCAAGAAATTTTGACAAGATCAAACAAAGAGAGTTTGTCATTGAGGGGCTTCAAAGGGCGTTTCCAAGGCCAATACTCTCTTTGGTAATAAACTTTCATTTCTTCCCATTTTTACCATGTTTACAGGCCATGATACTAATTTTTTACTTTTAAGTTATCAAAACATGTATATTTTATTTTTGACAACTTCTTAAAAATTATTTTATATATAACAAATATTTCTATTTTTACGATCTTCCATTAGTTTCATTTAATTGTTTTCAATGATATCAAAAGTGAGTGAAATGTCTTCGGCTAGTTTTTTTTTTTAATTGAATCAATTTTTAGTGTATTTATTTTTTTCTTCTAGAATTTTCACATCCATGAAATTACTTTAATTTTATAATTATTCATTAAAAAAATCCTCCCAAATCATTCATGTCCATATATAGCTGGGATTTCTTTGCTTGGCCTCTCTTCTCCCATCAACATGTGGAGGACTATAGTTGGGATTTATTGCCTACATTAGAATCTCCCATCAACATGTGGAGGAATATAGTTAGGATTTATTGCCTATATTAGAACCTACTGAACAACAATTCCCTTTTCTATTTTTTCTTTCAATTAATCATTGGGTTTAATAATTACTTGATTGGAAATAAGATCATCAAATGCTCACATTTTCTATTGTTTTTCTTAATATCAACATTTATTCCATTAAACAAGTATTTGAGCTTTACTTTTTACTATAACTAATCCATTTACAAATTATATGTCAACAACTTGTGGTGGACAAAGCGCAGATAAGAACATTGCTACCACAATCCAAATTCGCAAGGGAATATTTTGCTGTGTTCACCACTCTTTTCTTTGCTTGGCTAGTTGGACCCTGCAAGGTAAGATGATGTCAATTTACATAAAGACCCTCTATTTACATAGTATGTTAAGATCAATCCAAGAACGAGTTAAACTCCTCTACGCATGCAAGAATCACATCAATGAATTTTAACATCATCCAAAGTTTACGAATTACATGAGAAGCCTTTCATTTACAAGACAAATGGGAGTAAAAATAAATTAACCTAAGACTTGCTTAAAATTAACTTATTACCATCATTCCAAAATATATATTGCTTCAATGATATGAGAGCCAACACGCGTATTGCTTCAATGACCTAGAAACCAAGAGGTTATGTCTTTGAGTTTGCATTCAAACACGGGATAGGTACGACTCACATTAATTGGTTGTCACTACAGAATCTTTCCACGAGTGCAAGAACAATTATTCATGCCCAACACTGCCATTTCAGATCTCTGTCATAGACTTTTGGCAGAATAGAGACTATTTGAACAAAGTAATGGTGGACATTGAGAACTTCAACTTTAACGCTGAATTCAATATAAAATAATATGATTTTCAACAGCCAAGTTGAAAAACCTGCGGTGTTTGAGGCACTAGCCTCTAGTAGACCTGTTCCTGTCCCTACAAATCGTAAATAGACGAACCAATTCTCTTCATAATCTTTCTCTTTGGCCCTTTCACTTTCTATGCATTCCTTGCGAACTCAATCCGGCATAGCCAATGTATCTAGTTTGTAGGGTAGGGGTTCAAGAAGATTTTGAAGCAGAACATCTAATAAACACAAGTAGTAGCCAATCCCAACGCACACACATATATAAGTTTTTAATCACTAATTTGTAAGACTAATAATTGTAATATATGATTCTTACAGGTGAAGGAATCAGAATTCAATGGAAAAAGAGAAAAGAATGTTGTTCAGATCCACAAGTGCAGGTAATTTTTTTTTCTCGTATCAGAGTTCTATAATTGAGGTAATGCTACTTAGCCGTTCATAGGTTCCAATCTCACCTAGCTATCTGAGAGTCTGAAACACTTTCAACGCCCACAGAACAATCTGTCTATGATTGTTATGCTTCTTCTAAACCCTCAGTACTCATTCACTCACATCATTGATAACTTGAAATTATCACAGCCAAAAATGCCATTCAGAAAATCTCTATTGCCCCTAAACATATCCTATTCATTTGCAGGTTCCTAGAGCAAACTAACTGTGCTGGAATGTGCATTAATCTATGCAAGTTTCCAAGTCAGGATTTCATCAAGGATTCATTGGGAATGCCTGTCAGTATGGTACCCAGTAAGTCTCCTCACTAAGCTACAGAATCACCAAACAATTGCAGCAAATATTTTCTTCCCAAAAGAAAAAGAAAGTTTAAAGTTAACGTATACTGCTGCTTAAGGCAAATCTGGACAATAATTCAAGTTGTCCAACAATAACCGAGGGCTACTGGGTATTATTTTTCTTCTCTTATCTGTGAGTGTTTGAGTCATGTTGGACACACTTCTACTATTATTCTTACAAGGACAATTATATTTGGTGACTAGCTGGCTACCATGACTTCAACTCATTTCTTCTAATCCCTTTACTATTTACATTGGTTCCTATTGGCCATTAGGATAAATCATGGTGATTAACTGAAAGCCATGATTAAAACTTCATATTCACATGTTGAGGAATGTTAGAAATTAAGGGATTAAATTATTTCAACTGCATCTATGAGGACATTGAATAAAGTAAATCAGCTATCGCACAATGACTGGTAGATCCATAAGCAAAAGTGAAATTACTATTAAAGCAATTACCAGCACCAAATGAGGATCATGTTAATGGAGTGGAGGGTCCCATGCATGAACCATTTTGGGTGCAAATGAAATGTAGATAGGCCCCATCCAAGTTAAGTGGGATTTCTAACCTGCAGCTTAATATTGCAATATGGCTATAATCCAAGAATTAGAAGTTGAATTTCCAACGTTAATTAGTCATCCAGCTGAATCTCCAATGAACCAAACAACGCTCTCACCCATAATATGTAAAAACTGCAACAAAGCAGAGGCATTAATATTCTCATGTTAATTCAGCATCATGATGTAATAACTAGCTGGTAGCCATTAGGATTGGTGTCCATGACCAATAAACACATCAATATGCAAGAGAAATTTGGGAGGGAAAAAGGCTTCATAATATGATTCAAACAACCGTGTGTTTTTGTAAGCAGATTTTGATGACATGAGTTGTGAGATGATATTTGGACAGGAACCACCAGCTCCAACCGATGATCCAGTGCTTAAGCAACCGTGTTATAAACTATGTAGGCTTCTTCTTCCTTTTTCTTATTATACCTTTATTTCATTATCTGCAAGTGGAAAAGTCAAACATATCAAAATAATTCACTTGGCATGGAAGCAGGTTCTAATGAGATGTTATGGGGGATGGTAATATAAGTTAAAAATGAATTCTAACCTTATTCGTCTACTTATTTCAGGCAAAACGAAAGAAAAACACATGACAAACTGA

mRNA sequence

ATGGATGCAAAACTTATTCAAGAAAGGAGTGTCATTTTGGCAAATTGGCCAAACTTGAGGGGCAAGAACAAAAGAGAGTTGAGGAGGAAAAGCAATTCTTGTGTTGTTGCAGTGCTCACAAGACCAGCAGAGAGTGGAGTAGTAAATGAAGACACAAGAAAGGCCAACACTGTTTATAGAGACAACTGGTTTGATAAATTAGCCATTGATTATCTATCTCAGGCAGTACAGGCAACTTTAGGTTGGAGAAGCAAAAAGAGTGGATATGAAAGCTTGGTGGATGTGGCAACAATGGCGTCAAGAAATTTTGACAAGATCAAACAAAGAGAGTTTGTCATTGAGGGGCTTCAAAGGGCGTTTCCAAGGCCAATACTCTCTTTGATAAGAACATTGCTACCACAATCCAAATTCGCAAGGGAATATTTTGCTGTGTTCACCACTCTTTTCTTTGCTTGGCTAGTTGGACCCTGCAAGGTGAAGGAATCAGAATTCAATGGAAAAAGAGAAAAGAATGTTGTTCAGATCCACAAGTGCAGGTTCCTAGAGCAAACTAACTGTGCTGGAATGTGCATTAATCTATGCAAGTTTCCAAGTCAGGATTTCATCAAGGATTCATTGGGAATGCCTGTCAGTATGGTACCCAATTTTGATGACATGAGTTGTGAGATGATATTTGGACAGGAACCACCAGCTCCAACCGATGATCCAGTGCTTAAGCAACCGTGTTATAAACTATGCAAAACGAAAGAAAAACACATGACAAACTGA

Coding sequence (CDS)

ATGGATGCAAAACTTATTCAAGAAAGGAGTGTCATTTTGGCAAATTGGCCAAACTTGAGGGGCAAGAACAAAAGAGAGTTGAGGAGGAAAAGCAATTCTTGTGTTGTTGCAGTGCTCACAAGACCAGCAGAGAGTGGAGTAGTAAATGAAGACACAAGAAAGGCCAACACTGTTTATAGAGACAACTGGTTTGATAAATTAGCCATTGATTATCTATCTCAGGCAGTACAGGCAACTTTAGGTTGGAGAAGCAAAAAGAGTGGATATGAAAGCTTGGTGGATGTGGCAACAATGGCGTCAAGAAATTTTGACAAGATCAAACAAAGAGAGTTTGTCATTGAGGGGCTTCAAAGGGCGTTTCCAAGGCCAATACTCTCTTTGATAAGAACATTGCTACCACAATCCAAATTCGCAAGGGAATATTTTGCTGTGTTCACCACTCTTTTCTTTGCTTGGCTAGTTGGACCCTGCAAGGTGAAGGAATCAGAATTCAATGGAAAAAGAGAAAAGAATGTTGTTCAGATCCACAAGTGCAGGTTCCTAGAGCAAACTAACTGTGCTGGAATGTGCATTAATCTATGCAAGTTTCCAAGTCAGGATTTCATCAAGGATTCATTGGGAATGCCTGTCAGTATGGTACCCAATTTTGATGACATGAGTTGTGAGATGATATTTGGACAGGAACCACCAGCTCCAACCGATGATCCAGTGCTTAAGCAACCGTGTTATAAACTATGCAAAACGAAAGAAAAACACATGACAAACTGA

Protein sequence

MDAKLIQERSVILANWPNLRGKNKRELRRKSNSCVVAVLTRPAESGVVNEDTRKANTVYRDNWFDKLAIDYLSQAVQATLGWRSKKSGYESLVDVATMASRNFDKIKQREFVIEGLQRAFPRPILSLIRTLLPQSKFAREYFAVFTTLFFAWLVGPCKVKESEFNGKREKNVVQIHKCRFLEQTNCAGMCINLCKFPSQDFIKDSLGMPVSMVPNFDDMSCEMIFGQEPPAPTDDPVLKQPCYKLCKTKEKHMTN

Homology

[Close]

BLAST of Sed0027528 vs. NCBI nr
Match: XP_023534254.1 (beta-carotene isomerase D27, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 419.5 bits (1077), Expect = 2.1e-113
Identity = 203/254 (79.92%), Postives = 222/254 (87.40%), Query Frame = 0


Query: 1   MDAKLIQERSVILANWPNLRGKNKRELRRKSNSCVVAVLTRPAESGVVNEDTRKANTVYR 60
           MD KLIQER VIL NW N+RG +KR+LRRK+N C VAVLT  AE G  NE TR  NTVY 
Sbjct: 1   MDVKLIQERRVILGNWGNMRGNHKRKLRRKAN-CCVAVLTGAAERG-GNEGTRNLNTVYT 60

Query: 61  DNWFDKLAIDYLSQAVQATLGWRSKKSGYESLVDVATMASRNFDKIKQREFVIEGLQRAF 120
           DNWFDKLAID+LS+AVQAT GWRSKKSGYESLV+VATMASRN ++IKQRE +IE LQRAF
Sbjct: 61  DNWFDKLAIDHLSEAVQATSGWRSKKSGYESLVEVATMASRNLNQIKQREAMIEALQRAF 120

Query: 121 PRPILSLIRTLLPQSKFAREYFAVFTTLFFAWLVGPCKVKESEFNGKREKNVVQIHKCRF 180
           PRPILSLIR LLPQSKFAREYFA FTT+FFAWLVGPC+VKESE NG+RE+NVV IHKCRF
Sbjct: 121 PRPILSLIRALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESELNGRRERNVVHIHKCRF 180

Query: 181 LEQTNCAGMCINLCKFPSQDFIKDSLGMPVSMVPNFDDMSCEMIFGQEPPAPTDDPVLKQ 240
           LEQTNC GMCINLCKFP+QDFIKDSLGMPVSM+PNFDDMSCEM FG++PPA  +DP L Q
Sbjct: 181 LEQTNCVGMCINLCKFPTQDFIKDSLGMPVSMIPNFDDMSCEMKFGEDPPASIEDPALNQ 240

Query: 241 PCYKLCKTKEKHMT 255
           PCYKLCK KEKH T
Sbjct: 241 PCYKLCKKKEKHTT 252

[Close]

BLAST of Sed0027528 vs. NCBI nr
Match: XP_022931142.1 (beta-carotene isomerase D27, chloroplastic-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 418.7 bits (1075), Expect = 3.6e-113
Identity = 203/255 (79.61%), Postives = 223/255 (87.45%), Query Frame = 0


Query: 1   MDAKLIQERSVILANWPNLRGKNKRELRRKSNSCVVAVLTRPAESGVVNEDTRKANTVYR 60
           MD KLIQER V L NW NLRG +KR+LRRK+ +C VAVLT  AE G  NE TR  NTVY 
Sbjct: 1   MDVKLIQERRVFLGNWGNLRGNHKRKLRRKT-TCCVAVLTGAAERG-GNEGTRNLNTVYT 60

Query: 61  DNWFDKLAIDYLSQAVQATLGWRSKKSGYESLVDVATMASRNFDKIKQREFVIEGLQRAF 120
           DNWFDKLAID+LS+AVQAT GWRSKKSGYESLV+VATMASRN ++IKQRE +IE LQRAF
Sbjct: 61  DNWFDKLAIDHLSEAVQATSGWRSKKSGYESLVEVATMASRNLNQIKQREAMIEALQRAF 120

Query: 121 PRPILSLIRTLLPQSKFAREYFAVFTTLFFAWLVGPCKVKESEFNGKREKNVVQIHKCRF 180
           PRPILSLIRTLLPQSKFAREYFA FTT+FFAWLVGPC+VKESE NG+RE+NVV IHKCRF
Sbjct: 121 PRPILSLIRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESELNGRRERNVVHIHKCRF 180

Query: 181 LEQTNCAGMCINLCKFPSQDFIKDSLGMPVSMVPNFDDMSCEMIFGQEPPAPTDDPVLKQ 240
           LEQTNC GMCINLCKFP+QDFIKDSLGMPVSM+PNFDDMSCEM FG++PPA  +DP L Q
Sbjct: 181 LEQTNCVGMCINLCKFPTQDFIKDSLGMPVSMIPNFDDMSCEMKFGEDPPASIEDPALNQ 240

Query: 241 PCYKLCKTKEKHMTN 256
           PCYKLCK KEKH T+
Sbjct: 241 PCYKLCKKKEKHDTD 253

[Close]

BLAST of Sed0027528 vs. NCBI nr
Match: XP_022995501.1 (beta-carotene isomerase D27, chloroplastic-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 417.9 bits (1073), Expect = 6.2e-113
Identity = 202/253 (79.84%), Postives = 222/253 (87.75%), Query Frame = 0


Query: 1   MDAKLIQERSVILANWPNLRGKNKRELRRKSNSCVVAVLTRPAESGVVNEDTRKANTVYR 60
           MD KLIQER VIL NW NLRG +KR+LRR +N C VAVLT  AE G  NE+TR  N VYR
Sbjct: 1   MDVKLIQERRVILGNWGNLRGNHKRKLRRNAN-CCVAVLTGAAERG-GNEETRNLNAVYR 60

Query: 61  DNWFDKLAIDYLSQAVQATLGWRSKKSGYESLVDVATMASRNFDKIKQREFVIEGLQRAF 120
           DNWFDKLAID+LS+AVQAT GWRS+KSGYESLV+VATMASRN ++IKQRE +IE LQRAF
Sbjct: 61  DNWFDKLAIDHLSEAVQATSGWRSEKSGYESLVEVATMASRNLNQIKQREAMIEALQRAF 120

Query: 121 PRPILSLIRTLLPQSKFAREYFAVFTTLFFAWLVGPCKVKESEFNGKREKNVVQIHKCRF 180
           PRPILSLIRTLLPQSKFAREYFA FTT+FFAWLVGPC+VKESE NG+RE+NVV IHKCRF
Sbjct: 121 PRPILSLIRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESELNGRRERNVVHIHKCRF 180

Query: 181 LEQTNCAGMCINLCKFPSQDFIKDSLGMPVSMVPNFDDMSCEMIFGQEPPAPTDDPVLKQ 240
           LEQTNC GMCINLCKFP+Q+FIKDSLGMPVSM PNFDDMSCEM FG++PPA  +DP L Q
Sbjct: 181 LEQTNCVGMCINLCKFPTQEFIKDSLGMPVSMTPNFDDMSCEMKFGEDPPASIEDPALNQ 240

Query: 241 PCYKLCKTKEKHM 254
           PCYKLCK KEKHM
Sbjct: 241 PCYKLCKKKEKHM 251

[Close]

BLAST of Sed0027528 vs. NCBI nr
Match: XP_038888067.1 (beta-carotene isomerase D27, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 416.8 bits (1070), Expect = 1.4e-112
Identity = 206/256 (80.47%), Postives = 227/256 (88.67%), Query Frame = 0


Query: 1   MDAKLIQERSVILANWPNLRGKNK-RELRRKSNSCVVAVLTRPAESGVVNEDTRKANTVY 60
           MD ++IQER VIL   P +   NK ++L RKS  C VAVLTRPAESGV+ E+TRK NTVY
Sbjct: 1   MDLRVIQERRVIL---PTMMNNNKMKKLGRKSLPC-VAVLTRPAESGVI-EETRKTNTVY 60

Query: 61  RDNWFDKLAIDYLSQAVQATLGWRSKKSGYESLVDVATMASRNFDKIKQREFVIEGLQRA 120
            DNWFDK+AI +LSQAVQAT GWRSKKSGYESLV+V TMASRNF++IKQRE VI+ L RA
Sbjct: 61  TDNWFDKIAIHHLSQAVQATSGWRSKKSGYESLVEVTTMASRNFNQIKQREVVIQALGRA 120

Query: 121 FPRPILSLIRTLLPQSKFAREYFAVFTTLFFAWLVGPCKVKESEFNGKREKNVVQIHKCR 180
           FP+PILSLI+ L+PQSKFAREYFAVFTT+FFAWLVGPC+VKESEF GKREKNVVQIHKCR
Sbjct: 121 FPKPILSLIKALVPQSKFAREYFAVFTTVFFAWLVGPCEVKESEFEGKREKNVVQIHKCR 180

Query: 181 FLEQTNCAGMCINLCKFPSQDFIKDSLGMPVSMVPNFDDMSCEMIFGQEPPAPTDDPVLK 240
           FLEQTNCAGMCINLCKFP QDFIKDSLGMPVSMVPNFDDMSCEMIFG++PPAP DDP LK
Sbjct: 181 FLEQTNCAGMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAPIDDPALK 240

Query: 241 QPCYKLCKTKEKHMTN 256
           QPCYKLCK+KEKH TN
Sbjct: 241 QPCYKLCKSKEKHTTN 251

[Close]

BLAST of Sed0027528 vs. NCBI nr
Match: XP_023534253.1 (beta-carotene isomerase D27, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 413.7 bits (1062), Expect = 1.2e-111
Identity = 203/259 (78.38%), Postives = 222/259 (85.71%), Query Frame = 0


Query: 1   MDAKLIQERSVILANWPNLRGKNKRELRRKSNSCVVAVLTRPAESGVVNEDTRKANTVYR 60
           MD KLIQER VIL NW N+RG +KR+LRRK+N C VAVLT  AE G  NE TR  NTVY 
Sbjct: 1   MDVKLIQERRVILGNWGNMRGNHKRKLRRKAN-CCVAVLTGAAERG-GNEGTRNLNTVYT 60

Query: 61  DNWFDKLAIDYLSQAVQAT-----LGWRSKKSGYESLVDVATMASRNFDKIKQREFVIEG 120
           DNWFDKLAID+LS+AVQAT      GWRSKKSGYESLV+VATMASRN ++IKQRE +IE 
Sbjct: 61  DNWFDKLAIDHLSEAVQATSGHIFAGWRSKKSGYESLVEVATMASRNLNQIKQREAMIEA 120

Query: 121 LQRAFPRPILSLIRTLLPQSKFAREYFAVFTTLFFAWLVGPCKVKESEFNGKREKNVVQI 180
           LQRAFPRPILSLIR LLPQSKFAREYFA FTT+FFAWLVGPC+VKESE NG+RE+NVV I
Sbjct: 121 LQRAFPRPILSLIRALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESELNGRRERNVVHI 180

Query: 181 HKCRFLEQTNCAGMCINLCKFPSQDFIKDSLGMPVSMVPNFDDMSCEMIFGQEPPAPTDD 240
           HKCRFLEQTNC GMCINLCKFP+QDFIKDSLGMPVSM+PNFDDMSCEM FG++PPA  +D
Sbjct: 181 HKCRFLEQTNCVGMCINLCKFPTQDFIKDSLGMPVSMIPNFDDMSCEMKFGEDPPASIED 240

Query: 241 PVLKQPCYKLCKTKEKHMT 255
           P L QPCYKLCK KEKH T
Sbjct: 241 PALNQPCYKLCKKKEKHTT 257

[Close]

BLAST of Sed0027528 vs. ExPASy Swiss-Prot
Match: R4HZ96 (Beta-carotene isomerase D27, chloroplastic OS=Medicago truncatula OX=3880 GN=D27 PE=1 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 2.4e-88
Identity = 157/257 (61.09%), Postives = 197/257 (76.65%), Query Frame = 0


Query: 1   MDAKLIQERSVI---LANWPNLRGKNKRELRRKSNSCVVAVLTRPAESGVVNEDTRKANT 60
           MD+K+I     +   LA W  LR K K       ++ VV VL RP +   ++E+T +   
Sbjct: 1   MDSKMIAHNMSLTPTLAQWKKLRLKPK-------HTFVVGVLARPTDD--ISEETLRKTN 60

Query: 61  VYRDNWFDKLAIDYLSQAVQATLGWRSKKSGYESLVDVATMASRNFDKIKQREFVIEGLQ 120
           VY+DNWFDKLAI++LS++VQA  G  + KSG++SLV+ AT+AS+ F+  +Q+  +++ L 
Sbjct: 61  VYKDNWFDKLAINHLSKSVQAATGISNNKSGFDSLVEAATVASQKFNTTQQQGIILDALD 120

Query: 121 RAFPRPILSLIRTLLPQSKFAREYFAVFTTLFFAWLVGPCKVKESEFNGKREKNVVQIHK 180
           RAFP+PILS+IR ++P SK AREYFAVFTT+FFAWL+GP +V+ESE NG+REKN+V I K
Sbjct: 121 RAFPKPILSVIRRVMPPSKLAREYFAVFTTIFFAWLLGPSEVRESEINGRREKNIVHIKK 180

Query: 181 CRFLEQTNCAGMCINLCKFPSQDFIKDSLGMPVSMVPNFDDMSCEMIFGQEPPAPTDDPV 240
           CRFLE+TNC GMCINLCK PSQ FIKDS GMPV+MVPNFDDMSCEMIFGQEPPA TDDP 
Sbjct: 181 CRFLEETNCVGMCINLCKMPSQLFIKDSFGMPVNMVPNFDDMSCEMIFGQEPPASTDDPA 240

Query: 241 LKQPCYKLCKTKEKHMT 255
           LKQPCYKLCK K+ H T
Sbjct: 241 LKQPCYKLCKAKKNHAT 248

[Close]

BLAST of Sed0027528 vs. ExPASy Swiss-Prot
Match: C7AU21 (Beta-carotene isomerase D27, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=D27 PE=1 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 7.4e-69
Identity = 134/245 (54.69%), Postives = 164/245 (66.94%), Query Frame = 0


Query: 29  RKSNSCVVAVLTRPAES---------------GVVNEDTRKA--NTVYRDNWFDKLAIDY 88
           R+  S V AV+ RP E+                 V  +T  A   TVYRD+WFDKLAI Y
Sbjct: 33  RRCCSTVRAVMARPQEAPASAPAKKTETAAMMSTVQTETAAAPPATVYRDSWFDKLAIGY 92

Query: 89  LSQAVQATLGWRSKKSGYESLVDVATMASRNFDKIKQREFVIEGLQRAFPRPILSLIRTL 148
           LS+ +Q   G +++K GYESL+D A   SR F   KQ E V + L+RA P  IL++I+ +
Sbjct: 93  LSRNLQEASGLKNEKDGYESLIDAALAISRIFSLDKQSEIVTQALERALPSYILTMIKVM 152

Query: 149 LPQSKFAREYFAVFTTLFFAWLVGPCKVKESEFNGKREKNVVQIHKCRFLEQTNCAGMCI 208
           +P S+F+REYFA FTT+FF WLVGPC+V ESE  G++EKNVV I KCRFLE TNC GMC 
Sbjct: 153 MPPSRFSREYFAAFTTIFFPWLVGPCEVMESEVEGRKEKNVVYIPKCRFLESTNCVGMCT 212

Query: 209 NLCKFPSQDFIKDSLGMPVSMVPNFDDMSCEMIFGQEPPAPTDDPVLKQPCYKL-CKTKE 256
           NLCK P Q FI+DSLGM V M PNF+DMSCEMIFGQ+P  P DDP LKQPC++  C  K+
Sbjct: 213 NLCKIPCQKFIQDSLGMKVYMSPNFEDMSCEMIFGQQP--PEDDPALKQPCFRTKCVAKQ 272

[Close]

BLAST of Sed0027528 vs. ExPASy Swiss-Prot
Match: Q7XA78 (Beta-carotene isomerase D27, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=D27 PE=1 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 7.4e-61
Identity = 110/205 (53.66%), Postives = 149/205 (72.68%), Query Frame = 0


Query: 50  EDTRKANTVYRDNWFDKLAIDYLSQAVQ--ATLGWRSKKSGYESLVDVATMASRNFDKIK 109
           E +   N    D++F K+AI+YLS+ +Q  A +   SK + Y+ LVD AT  SRNFD  +
Sbjct: 56  ETSNTKNASIEDSFFSKIAINYLSKNLQDAAGISSSSKSTDYDRLVDTATRVSRNFDTKQ 115

Query: 110 QREFVIEGLQRAFPRPILSLIRTLLPQSKFAREYFAVFTTLFFAWLVGPCKVKESEFNGK 169
           Q EFV+  L RA P  I SLI+   P SK +RE FA+FTT+ FAWLVGP +V+E+E NG+
Sbjct: 116 QHEFVLSSLDRALPTVISSLIKMAFPPSKVSRELFALFTTISFAWLVGPSEVRETEVNGR 175

Query: 170 REKNVVQIHKCRFLEQTNCAGMCINLCKFPSQDFIKDSLGMPVSMVPNFDDMSCEMIFGQ 229
           +EK+VV I KCRFLEQ+NC GMC ++CK PSQ FIK+SLGMP+ M P+F+D+SC+M+FG+
Sbjct: 176 KEKSVVYIEKCRFLEQSNCVGMCTHICKIPSQIFIKNSLGMPIYMEPDFNDLSCKMMFGR 235

Query: 230 EPPAPTDDPVLKQPCYKLCKTKEKH 253
           EPP   DDP +KQPC++ CK+ + +
Sbjct: 236 EPPEIEDDPAMKQPCFEFCKSNKSY 260

[Close]

BLAST of Sed0027528 vs. ExPASy TrEMBL
Match: A0A6J1ESQ1 (beta-carotene isomerase D27, chloroplastic-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111437410 PE=4 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 1.7e-113
Identity = 203/255 (79.61%), Postives = 223/255 (87.45%), Query Frame = 0


Query: 1   MDAKLIQERSVILANWPNLRGKNKRELRRKSNSCVVAVLTRPAESGVVNEDTRKANTVYR 60
           MD KLIQER V L NW NLRG +KR+LRRK+ +C VAVLT  AE G  NE TR  NTVY 
Sbjct: 1   MDVKLIQERRVFLGNWGNLRGNHKRKLRRKT-TCCVAVLTGAAERG-GNEGTRNLNTVYT 60

Query: 61  DNWFDKLAIDYLSQAVQATLGWRSKKSGYESLVDVATMASRNFDKIKQREFVIEGLQRAF 120
           DNWFDKLAID+LS+AVQAT GWRSKKSGYESLV+VATMASRN ++IKQRE +IE LQRAF
Sbjct: 61  DNWFDKLAIDHLSEAVQATSGWRSKKSGYESLVEVATMASRNLNQIKQREAMIEALQRAF 120

Query: 121 PRPILSLIRTLLPQSKFAREYFAVFTTLFFAWLVGPCKVKESEFNGKREKNVVQIHKCRF 180
           PRPILSLIRTLLPQSKFAREYFA FTT+FFAWLVGPC+VKESE NG+RE+NVV IHKCRF
Sbjct: 121 PRPILSLIRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESELNGRRERNVVHIHKCRF 180

Query: 181 LEQTNCAGMCINLCKFPSQDFIKDSLGMPVSMVPNFDDMSCEMIFGQEPPAPTDDPVLKQ 240
           LEQTNC GMCINLCKFP+QDFIKDSLGMPVSM+PNFDDMSCEM FG++PPA  +DP L Q
Sbjct: 181 LEQTNCVGMCINLCKFPTQDFIKDSLGMPVSMIPNFDDMSCEMKFGEDPPASIEDPALNQ 240

Query: 241 PCYKLCKTKEKHMTN 256
           PCYKLCK KEKH T+
Sbjct: 241 PCYKLCKKKEKHDTD 253

[Close]

BLAST of Sed0027528 vs. ExPASy TrEMBL
Match: A0A6J1K233 (beta-carotene isomerase D27, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111491020 PE=4 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 3.0e-113
Identity = 202/253 (79.84%), Postives = 222/253 (87.75%), Query Frame = 0


Query: 1   MDAKLIQERSVILANWPNLRGKNKRELRRKSNSCVVAVLTRPAESGVVNEDTRKANTVYR 60
           MD KLIQER VIL NW NLRG +KR+LRR +N C VAVLT  AE G  NE+TR  N VYR
Sbjct: 1   MDVKLIQERRVILGNWGNLRGNHKRKLRRNAN-CCVAVLTGAAERG-GNEETRNLNAVYR 60

Query: 61  DNWFDKLAIDYLSQAVQATLGWRSKKSGYESLVDVATMASRNFDKIKQREFVIEGLQRAF 120
           DNWFDKLAID+LS+AVQAT GWRS+KSGYESLV+VATMASRN ++IKQRE +IE LQRAF
Sbjct: 61  DNWFDKLAIDHLSEAVQATSGWRSEKSGYESLVEVATMASRNLNQIKQREAMIEALQRAF 120

Query: 121 PRPILSLIRTLLPQSKFAREYFAVFTTLFFAWLVGPCKVKESEFNGKREKNVVQIHKCRF 180
           PRPILSLIRTLLPQSKFAREYFA FTT+FFAWLVGPC+VKESE NG+RE+NVV IHKCRF
Sbjct: 121 PRPILSLIRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESELNGRRERNVVHIHKCRF 180

Query: 181 LEQTNCAGMCINLCKFPSQDFIKDSLGMPVSMVPNFDDMSCEMIFGQEPPAPTDDPVLKQ 240
           LEQTNC GMCINLCKFP+Q+FIKDSLGMPVSM PNFDDMSCEM FG++PPA  +DP L Q
Sbjct: 181 LEQTNCVGMCINLCKFPTQEFIKDSLGMPVSMTPNFDDMSCEMKFGEDPPASIEDPALNQ 240

Query: 241 PCYKLCKTKEKHM 254
           PCYKLCK KEKHM
Sbjct: 241 PCYKLCKKKEKHM 251

[Close]

BLAST of Sed0027528 vs. ExPASy TrEMBL
Match: A0A6J1ESU9 (beta-carotene isomerase D27, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437410 PE=4 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 9.6e-112
Identity = 203/260 (78.08%), Postives = 223/260 (85.77%), Query Frame = 0


Query: 1   MDAKLIQERSVILANWPNLRGKNKRELRRKSNSCVVAVLTRPAESGVVNEDTRKANTVYR 60
           MD KLIQER V L NW NLRG +KR+LRRK+ +C VAVLT  AE G  NE TR  NTVY 
Sbjct: 1   MDVKLIQERRVFLGNWGNLRGNHKRKLRRKT-TCCVAVLTGAAERG-GNEGTRNLNTVYT 60

Query: 61  DNWFDKLAIDYLSQAVQAT-----LGWRSKKSGYESLVDVATMASRNFDKIKQREFVIEG 120
           DNWFDKLAID+LS+AVQAT      GWRSKKSGYESLV+VATMASRN ++IKQRE +IE 
Sbjct: 61  DNWFDKLAIDHLSEAVQATSGHMFAGWRSKKSGYESLVEVATMASRNLNQIKQREAMIEA 120

Query: 121 LQRAFPRPILSLIRTLLPQSKFAREYFAVFTTLFFAWLVGPCKVKESEFNGKREKNVVQI 180
           LQRAFPRPILSLIRTLLPQSKFAREYFA FTT+FFAWLVGPC+VKESE NG+RE+NVV I
Sbjct: 121 LQRAFPRPILSLIRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESELNGRRERNVVHI 180

Query: 181 HKCRFLEQTNCAGMCINLCKFPSQDFIKDSLGMPVSMVPNFDDMSCEMIFGQEPPAPTDD 240
           HKCRFLEQTNC GMCINLCKFP+QDFIKDSLGMPVSM+PNFDDMSCEM FG++PPA  +D
Sbjct: 181 HKCRFLEQTNCVGMCINLCKFPTQDFIKDSLGMPVSMIPNFDDMSCEMKFGEDPPASIED 240

Query: 241 PVLKQPCYKLCKTKEKHMTN 256
           P L QPCYKLCK KEKH T+
Sbjct: 241 PALNQPCYKLCKKKEKHDTD 258

[Close]

BLAST of Sed0027528 vs. ExPASy TrEMBL
Match: A0A6J1K5Z4 (beta-carotene isomerase D27, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491020 PE=4 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 1.6e-111
Identity = 202/258 (78.29%), Postives = 222/258 (86.05%), Query Frame = 0


Query: 1   MDAKLIQERSVILANWPNLRGKNKRELRRKSNSCVVAVLTRPAESGVVNEDTRKANTVYR 60
           MD KLIQER VIL NW NLRG +KR+LRR +N C VAVLT  AE G  NE+TR  N VYR
Sbjct: 1   MDVKLIQERRVILGNWGNLRGNHKRKLRRNAN-CCVAVLTGAAERG-GNEETRNLNAVYR 60

Query: 61  DNWFDKLAIDYLSQAVQAT-----LGWRSKKSGYESLVDVATMASRNFDKIKQREFVIEG 120
           DNWFDKLAID+LS+AVQAT      GWRS+KSGYESLV+VATMASRN ++IKQRE +IE 
Sbjct: 61  DNWFDKLAIDHLSEAVQATSAHIFAGWRSEKSGYESLVEVATMASRNLNQIKQREAMIEA 120

Query: 121 LQRAFPRPILSLIRTLLPQSKFAREYFAVFTTLFFAWLVGPCKVKESEFNGKREKNVVQI 180
           LQRAFPRPILSLIRTLLPQSKFAREYFA FTT+FFAWLVGPC+VKESE NG+RE+NVV I
Sbjct: 121 LQRAFPRPILSLIRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESELNGRRERNVVHI 180

Query: 181 HKCRFLEQTNCAGMCINLCKFPSQDFIKDSLGMPVSMVPNFDDMSCEMIFGQEPPAPTDD 240
           HKCRFLEQTNC GMCINLCKFP+Q+FIKDSLGMPVSM PNFDDMSCEM FG++PPA  +D
Sbjct: 181 HKCRFLEQTNCVGMCINLCKFPTQEFIKDSLGMPVSMTPNFDDMSCEMKFGEDPPASIED 240

Query: 241 PVLKQPCYKLCKTKEKHM 254
           P L QPCYKLCK KEKHM
Sbjct: 241 PALNQPCYKLCKKKEKHM 256

[Close]

BLAST of Sed0027528 vs. ExPASy TrEMBL
Match: A0A6J1HUP9 (beta-carotene isomerase D27, chloroplastic-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111466998 PE=4 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 1.8e-110
Identity = 199/256 (77.73%), Postives = 226/256 (88.28%), Query Frame = 0


Query: 1   MDAKLIQERSVILANWPNLRGKNK-RELRRKSNSCVVAVLTRPAESGVVNEDTRKANTVY 60
           M+ ++ +ER VIL +  N+R  NK +++RRKS +C VAVLTR AESG   E+TRK NTVY
Sbjct: 1   MEVRVGEERRVILGSGTNVRRSNKTKKMRRKSIAC-VAVLTRAAESG-ATEETRKPNTVY 60

Query: 61  RDNWFDKLAIDYLSQAVQATLGWRSKKSGYESLVDVATMASRNFDKIKQREFVIEGLQRA 120
            DNWF+K+AI ++SQAVQAT GWRSKKSGYESLV+VATMASRN+++IKQRE +I+ L RA
Sbjct: 61  TDNWFEKIAIHHVSQAVQATSGWRSKKSGYESLVEVATMASRNYNQIKQREVIIQALGRA 120

Query: 121 FPRPILSLIRTLLPQSKFAREYFAVFTTLFFAWLVGPCKVKESEFNGKREKNVVQIHKCR 180
           FP PILSLIRTLLPQSKFAREYFA FTT+FFAWLVGPC+VKES+F GK+EKNVVQIHKCR
Sbjct: 121 FPAPILSLIRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESDFKGKKEKNVVQIHKCR 180

Query: 181 FLEQTNCAGMCINLCKFPSQDFIKDSLGMPVSMVPNFDDMSCEMIFGQEPPAPTDDPVLK 240
           FLEQTNCAGMCINLCKFP QDFIKDSLGMPVSMVPNFDDMSCEMIFG++PPA  DDP LK
Sbjct: 181 FLEQTNCAGMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAAVDDPALK 240

Query: 241 QPCYKLCKTKEKHMTN 256
           QPCYKLCKTKEKH TN
Sbjct: 241 QPCYKLCKTKEKHTTN 254

[Close]

BLAST of Sed0027528 vs. TAIR 10
Match: AT1G03055.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64680.1); Has 143 Blast hits to 143 proteins in 26 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). )

HSP 1 Score: 235.3 bits (599), Expect = 5.3e-62
Identity = 110/205 (53.66%), Postives = 149/205 (72.68%), Query Frame = 0


Query: 50  EDTRKANTVYRDNWFDKLAIDYLSQAVQ--ATLGWRSKKSGYESLVDVATMASRNFDKIK 109
           E +   N    D++F K+AI+YLS+ +Q  A +   SK + Y+ LVD AT  SRNFD  +
Sbjct: 56  ETSNTKNASIEDSFFSKIAINYLSKNLQDAAGISSSSKSTDYDRLVDTATRVSRNFDTKQ 115

Query: 110 QREFVIEGLQRAFPRPILSLIRTLLPQSKFAREYFAVFTTLFFAWLVGPCKVKESEFNGK 169
           Q EFV+  L RA P  I SLI+   P SK +RE FA+FTT+ FAWLVGP +V+E+E NG+
Sbjct: 116 QHEFVLSSLDRALPTVISSLIKMAFPPSKVSRELFALFTTISFAWLVGPSEVRETEVNGR 175

Query: 170 REKNVVQIHKCRFLEQTNCAGMCINLCKFPSQDFIKDSLGMPVSMVPNFDDMSCEMIFGQ 229
           +EK+VV I KCRFLEQ+NC GMC ++CK PSQ FIK+SLGMP+ M P+F+D+SC+M+FG+
Sbjct: 176 KEKSVVYIEKCRFLEQSNCVGMCTHICKIPSQIFIKNSLGMPIYMEPDFNDLSCKMMFGR 235

Query: 230 EPPAPTDDPVLKQPCYKLCKTKEKH 253
           EPP   DDP +KQPC++ CK+ + +
Sbjct: 236 EPPEIEDDPAMKQPCFEFCKSNKSY 260

[Close]

BLAST of Sed0027528 vs. TAIR 10
Match: AT1G64680.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03055.1); Has 146 Blast hits to 146 proteins in 26 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). )

HSP 1 Score: 157.9 bits (398), Expect = 1.1e-38
Identity = 85/225 (37.78%), Postives = 126/225 (56.00%), Query Frame = 0


Query: 28  RRKSNSCVVAVLT-RPAESGVVNEDTRKANTVYRDNWFDKLAIDYLSQAVQATLGWRSKK 87
           RR+S  C +A  +  PA  G+         T Y D   +++ +   ++ +    G + KK
Sbjct: 15  RRRSTRCGIAEPSGEPAPMGL--------KTRYEDGLVERVFMGLFARKMD-KFGSKKKK 74

Query: 88  S---------GYESLVDVATMASRNFDKIKQREFVIEGLQRAFPRPILSLIRTLLPQSKF 147
                      YES V+V+    +   +++Q+E V E L    P       R L P +K+
Sbjct: 75  DTKEKGFWEYDYESFVEVSKRVMQGRSRVQQQEAVREVLLSMLPPGAPEQFRKLFPPTKW 134

Query: 148 AREYFAVFTTLFFAWLVGPCKVKESEFNGKREKNVVQIHKCRFLEQTNCAGMCINLCKFP 207
           A E+ A  T  FF WLVGP +V E E NG ++++ V+I KCR+LE + C GMC+N+CK P
Sbjct: 135 AAEFNAALTVPFFHWLVGPSQVIEVEVNGVKQRSGVRIKKCRYLENSGCVGMCVNMCKIP 194

Query: 208 SQDFIKDSLGMPVSMVPNFDDMSCEMIFGQEPPAPTDDPVLKQPC 243
           +QDF  +  G+P++M PN++DMSCEMI+GQ PPA  +D   KQPC
Sbjct: 195 TQDFFTNEFGLPLTMNPNYEDMSCEMIYGQAPPAFEEDVATKQPC 230

[Close]

BLAST of Sed0027528 vs. TAIR 10
Match: AT1G03055.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64680.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 131.3 bits (329), Expect = 1.1e-30
Identity = 67/132 (50.76%), Postives = 89/132 (67.42%), Query Frame = 0


Query: 50  EDTRKANTVYRDNWFDKLAIDYLSQAVQ--ATLGWRSKKSGYESLVDVATMASRNFDKIK 109
           E +   N    D++F K+AI+YLS+ +Q  A +   SK + Y+ LVD AT  SRNFD  +
Sbjct: 56  ETSNTKNASIEDSFFSKIAINYLSKNLQDAAGISSSSKSTDYDRLVDTATRVSRNFDTKQ 115

Query: 110 QREFVIEGLQRAFPRPILSLIRTLLPQSKFAREYFAVFTTLFFAWLVGPCKVKESEFNGK 169
           Q EFV+  L RA P  I SLI+   P SK +RE FA+FTT+ FAWLVGP +V+E+E NG+
Sbjct: 116 QHEFVLSSLDRALPTVISSLIKMAFPPSKVSRELFALFTTISFAWLVGPSEVRETEVNGR 175

Query: 170 REKNVVQIHKCR 180
           +EK+VV I KCR
Sbjct: 176 KEKSVVYIEKCR 187

[Close]

BLAST of Sed0027528 vs. TAIR 10
Match: AT4G01995.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 117.5 bits (293), Expect = 1.6e-26
Identity = 69/211 (32.70%), Postives = 105/211 (49.76%), Query Frame = 0


Query: 41  RPAESGVVNEDTRKANTVYRDNWFDKLAIDYLSQAVQATLGWRSKKSGYESLVD-VATMA 100
           R + S  V  D       Y+    D   +      +   +G  S+K GY  L++ V  + 
Sbjct: 34  RISNSSEVKSDEGAPKLEYKPGPLDDFFMQSFRNKLVEEVGSDSEKPGYVGLIELVKLLL 93

Query: 101 SRNFDKIKQREFVIEGLQRAFPRPILSLIRTL---LPQSKFAREYFAVFTTLFFAWLVGP 160
            +   + +  +  +  L+  FP  IL L + L   + Q K A    A  T L   WL+GP
Sbjct: 94  LKGRTRSETSDAAVRILKSLFPPLILELYKLLIAPIAQGKLAALMVARVTVLTCQWLMGP 153

Query: 161 CKVKESEF-NGKREKNVVQIHKCRFLEQTNCAGMCINLCKFPSQDFIKDSLGMPVSMVPN 220
            KV   +  NG+   + V + KC++LE++ C G+CIN CK P+Q F KD +G+P+ M PN
Sbjct: 154 SKVNIIDLPNGESWDSGVFVEKCQYLEESKCVGVCINTCKLPTQTFFKDYMGVPLVMEPN 213

Query: 221 FDDMSCEMIFGQEPPAPTDDPVLKQPCYKLC 247
           F D SC+  FG  P  P DD  + +PC++ C
Sbjct: 214 FKDYSCQFKFGVAP--PEDDGNVNEPCFETC 242

The following BLAST results are available for this feature:

BLAST of Sed0027528 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023534254.1	2.1e-113	79.92	beta-carotene isomerase D27, chloroplastic-like isoform X2 [Cucurbita pepo subsp...	[more]
XP_022931142.1	3.6e-113	79.61	beta-carotene isomerase D27, chloroplastic-like isoform X2 [Cucurbita moschata]	[more]
XP_022995501.1	6.2e-113	79.84	beta-carotene isomerase D27, chloroplastic-like isoform X2 [Cucurbita maxima]	[more]
XP_038888067.1	1.4e-112	80.47	beta-carotene isomerase D27, chloroplastic isoform X2 [Benincasa hispida]	[more]
XP_023534253.1	1.2e-111	78.38	beta-carotene isomerase D27, chloroplastic-like isoform X1 [Cucurbita pepo subsp...	[more]

BLAST of Sed0027528 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
R4HZ96	2.4e-88	61.09	Beta-carotene isomerase D27, chloroplastic OS=Medicago truncatula OX=3880 GN=D27...	[more]
C7AU21	7.4e-69	54.69	Beta-carotene isomerase D27, chloroplastic OS=Oryza sativa subsp. japonica OX=39...	[more]
Q7XA78	7.4e-61	53.66	Beta-carotene isomerase D27, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=D2...	[more]

BLAST of Sed0027528 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ESQ1	1.7e-113	79.61	beta-carotene isomerase D27, chloroplastic-like isoform X2 OS=Cucurbita moschata...	[more]
A0A6J1K233	3.0e-113	79.84	beta-carotene isomerase D27, chloroplastic-like isoform X2 OS=Cucurbita maxima O...	[more]
A0A6J1ESU9	9.6e-112	78.08	beta-carotene isomerase D27, chloroplastic-like isoform X1 OS=Cucurbita moschata...	[more]
A0A6J1K5Z4	1.6e-111	78.29	beta-carotene isomerase D27, chloroplastic-like isoform X1 OS=Cucurbita maxima O...	[more]
A0A6J1HUP9	1.8e-110	77.73	beta-carotene isomerase D27, chloroplastic-like isoform X3 OS=Cucurbita maxima O...	[more]

BLAST of Sed0027528 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G03055.1	5.3e-62	53.66	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G64680.1	1.1e-38	37.78	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G03055.2	1.1e-30	50.76	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G01995.1	1.6e-26	32.70	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025114	Beta-carotene isomerase D27-like, C-terminal	PFAM	PF13225	DUF4033	coord: 152..232 e-value: 4.0E-34 score: 116.5
None	No IPR available	PANTHER	PTHR33591:SF1	BETA-CAROTENE ISOMERASE D27, CHLOROPLASTIC	coord: 1..254
IPR038938	Beta-carotene isomerase D27-like	PANTHER	PTHR33591	BETA-CAROTENE ISOMERASE D27	coord: 1..254

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0027528.1	Sed0027528.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010223	secondary shoot formation
biological_process	GO:1901601	strigolactone biosynthetic process
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0016859	cis-trans isomerase activity
molecular_function	GO:0005506	iron ion binding