Sed0027523 (gene) Chayote v1

Overview


Name	Sed0027523
Type	gene
Organism	Sechium edule (Chayote v1)
Description	ethylene-responsive transcription factor RAP2-1
Location	LG11: 23467725 .. 23468718 (+)
RNA-Seq Expression	Sed0027523
Synteny	Sed0027523

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCGTGTCAATATAAAATAATTGTAAGATAAAATTTGATATTTATGTCGTATATAGTTTATGTTGGGAATTAAGGTTATGGTGCATATAAAACTAATCATGCAATTTGGGGTCTTCCCTCCCTCTGTCTTGAAAATAAAAGGAATGAATTGTTAGAAAGAACGACAGAGAGGATTGAATTTGTCGGCCATCTTAGGAAGTGTGTTTCCCTCAAGTCCCCTTAAAACCTCCACCCCCACCCCCACACACACAAAAACAAACACTCCATTTCATTTGTTTTGTGAGCATGGAACAAGAAGAAGCCGGCGAATCCGAGAGGCGGCAGGCGGAGAAGAAGCCTTACAGAGGAATAAGGATGAGGAAGTGGGGAAAGTGGGTGGCCGAAATCCGAGAGCCAAACAAGCGCTCTAGGATTTGGCTGGGCTCCTACACCACCCCGGTCGCGGCCGCCAGAGCCTACGACACCGCCGTCTTTTACCTCAGAGGCCCATCCGCCCGCCTCAACTTCCCCGACCTCATCGTCGACCACCGCCTCCTCGATCTCTCCCCTTCCTCCATTCGCCAACGCGCCATCGAGGTCGGCGCCCGAGTCGACGCTGCCGCCCGCCACTCCAAACCTACTTCGCATAAGCCCGACTTGAACCGCTTTCCCGACCCGGATAGCTCGGATGAAGGTTGATCACCATCACTGTTTCATGTGCTTCATACACAAGATCTTGATGAAATAGAGAGAAAGGAACCATGTGGGCTTCGCTTATTCGTTTGTAACACGGGAGAGATATGGTGAAGTAAGCTTGTTTGTGAATCCCACTACTAATTTAACGTTTCTTCTCTGCATCACCATTATTTTCTTAACTTTTTATGATTGCTTTTGTGATTCATTTTTCTTTTATTCATGTCGAGGGACTTTTAGGTTTTGTCTCGGTGATATTATTGGCTGCTACGTAAATTTATTTTAGAACCAAAAATGGGTGTTTGTTTGATGAATTTAAAAG

mRNA sequence

GCCGTGTCAATATAAAATAATTGTAAGATAAAATTTGATATTTATGTCGTATATAGTTTATGTTGGGAATTAAGGTTATGGTGCATATAAAACTAATCATGCAATTTGGGGTCTTCCCTCCCTCTGTCTTGAAAATAAAAGGAATGAATTGTTAGAAAGAACGACAGAGAGGATTGAATTTGTCGGCCATCTTAGGAAGTGTGTTTCCCTCAAGTCCCCTTAAAACCTCCACCCCCACCCCCACACACACAAAAACAAACACTCCATTTCATTTGTTTTGTGAGCATGGAACAAGAAGAAGCCGGCGAATCCGAGAGGCGGCAGGCGGAGAAGAAGCCTTACAGAGGAATAAGGATGAGGAAGTGGGGAAAGTGGGTGGCCGAAATCCGAGAGCCAAACAAGCGCTCTAGGATTTGGCTGGGCTCCTACACCACCCCGGTCGCGGCCGCCAGAGCCTACGACACCGCCGTCTTTTACCTCAGAGGCCCATCCGCCCGCCTCAACTTCCCCGACCTCATCGTCGACCACCGCCTCCTCGATCTCTCCCCTTCCTCCATTCGCCAACGCGCCATCGAGGTCGGCGCCCGAGTCGACGCTGCCGCCCGCCACTCCAAACCTACTTCGCATAAGCCCGACTTGAACCGCTTTCCCGACCCGGATAGCTCGGATGAAGGTTGATCACCATCACTGTTTCATGTGCTTCATACACAAGATCTTGATGAAATAGAGAGAAAGGAACCATGTGGGCTTCGCTTATTCGTTTGTAACACGGGAGAGATATGGTGAAGTAAGCTTGTTTGTGAATCCCACTACTAATTTAACGTTTCTTCTCTGCATCACCATTATTTTCTTAACTTTTTATGATTGCTTTTGTGATTCATTTTTCTTTTATTCATGTCGAGGGACTTTTAGGTTTTGTCTCGGTGATATTATTGGCTGCTACGTAAATTTATTTTAGAACCAAAAATGGGTGTTTGTTTGATGAATTTAAAAG

Coding sequence (CDS)

ATGGAACAAGAAGAAGCCGGCGAATCCGAGAGGCGGCAGGCGGAGAAGAAGCCTTACAGAGGAATAAGGATGAGGAAGTGGGGAAAGTGGGTGGCCGAAATCCGAGAGCCAAACAAGCGCTCTAGGATTTGGCTGGGCTCCTACACCACCCCGGTCGCGGCCGCCAGAGCCTACGACACCGCCGTCTTTTACCTCAGAGGCCCATCCGCCCGCCTCAACTTCCCCGACCTCATCGTCGACCACCGCCTCCTCGATCTCTCCCCTTCCTCCATTCGCCAACGCGCCATCGAGGTCGGCGCCCGAGTCGACGCTGCCGCCCGCCACTCCAAACCTACTTCGCATAAGCCCGACTTGAACCGCTTTCCCGACCCGGATAGCTCGGATGAAGGTTGA

Protein sequence

MEQEEAGESERRQAEKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPDLIVDHRLLDLSPSSIRQRAIEVGARVDAAARHSKPTSHKPDLNRFPDPDSSDEG

Homology

[Close]

BLAST of Sed0027523 vs. NCBI nr
Match: XP_038884237.1 (ethylene-responsive transcription factor RAP2-1-like [Benincasa hispida])

HSP 1 Score: 201.8 bits (512), Expect = 3.5e-48
Identity = 103/123 (83.74%), Postives = 112/123 (91.06%), Query Frame = 0


Query: 15  EKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNF 74
           ++KPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP+AAARAYDTAVFYLRGPSARLNF
Sbjct: 20  QEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAARAYDTAVFYLRGPSARLNF 79

Query: 75  PDLI---VDHRLLDLSPSSIRQRAIEVGARVDAAA-----RHSKPTSHKPDLNRFPDPDS 130
           PDLI   +DH+LLD+SPSSIR+RAIEVGARVDAAA     R SKP S KPDLN+FPDP+S
Sbjct: 80  PDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLRQSKPISDKPDLNQFPDPES 139

[Close]

BLAST of Sed0027523 vs. NCBI nr
Match: XP_022997304.1 (ethylene-responsive transcription factor RAP2-1-like [Cucurbita maxima])

HSP 1 Score: 200.7 bits (509), Expect = 7.9e-48
Identity = 102/123 (82.93%), Postives = 112/123 (91.06%), Query Frame = 0


Query: 15  EKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNF 74
           ++KPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP+AAARAYDTAVFYLRGPSARLNF
Sbjct: 20  QEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAARAYDTAVFYLRGPSARLNF 79

Query: 75  PDLI---VDHRLLDLSPSSIRQRAIEVGARVDAAA-----RHSKPTSHKPDLNRFPDPDS 130
           PDLI   +DH+LLD+SPSSIR+RAIEVGARVDAAA     R SKP S KPDLN+FP+P+S
Sbjct: 80  PDLILQDMDHQLLDVSPSSIRRRAIEVGARVDAAANRTSLRQSKPISEKPDLNQFPEPES 139

[Close]

BLAST of Sed0027523 vs. NCBI nr
Match: XP_008444599.1 (PREDICTED: ethylene-responsive transcription factor RAP2-1 [Cucumis melo] >KAA0060919.1 ethylene-responsive transcription factor RAP2-1 [Cucumis melo var. makuwa])

HSP 1 Score: 200.7 bits (509), Expect = 7.9e-48
Identity = 105/130 (80.77%), Postives = 117/130 (90.00%), Query Frame = 0


Query: 10  ERRQA--EKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRG 69
           +R+Q+  ++KPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP+AAARAYDTAVFYLRG
Sbjct: 12  KRKQSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAARAYDTAVFYLRG 71

Query: 70  PSARLNFPDLI---VDHRLLDLSPSSIRQRAIEVGARVDAAA-----RHSKPTSHKPDLN 129
           PSARLNFPDLI   +DH+LLD+SPSSIR+RAIEVGARVDAAA     R SKP S KPDLN
Sbjct: 72  PSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLRQSKPISDKPDLN 131

[Close]

BLAST of Sed0027523 vs. NCBI nr
Match: KAG7029328.1 (Ethylene-responsive transcription factor RAP2-1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 200.7 bits (509), Expect = 7.9e-48
Identity = 102/123 (82.93%), Postives = 112/123 (91.06%), Query Frame = 0


Query: 15  EKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNF 74
           ++KPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP+AAARAYDTAVFYLRGPSARLNF
Sbjct: 107 QEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAARAYDTAVFYLRGPSARLNF 166

Query: 75  PDLI---VDHRLLDLSPSSIRQRAIEVGARVDAAA-----RHSKPTSHKPDLNRFPDPDS 130
           PDLI   +DH+LLD+SPSSIR+RAIEVGARVDAAA     R SKP S KPDLN+FP+P+S
Sbjct: 167 PDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAANRTSLRQSKPISEKPDLNQFPEPES 226

[Close]

BLAST of Sed0027523 vs. NCBI nr
Match: XP_022962377.1 (ethylene-responsive transcription factor RAP2-1-like [Cucurbita moschata] >XP_023545716.1 ethylene-responsive transcription factor RAP2-1-like [Cucurbita pepo subsp. pepo] >KAG6598357.1 Ethylene-responsive transcription factor RAP2-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 200.7 bits (509), Expect = 7.9e-48
Identity = 102/123 (82.93%), Postives = 112/123 (91.06%), Query Frame = 0


Query: 15  EKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNF 74
           ++KPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP+AAARAYDTAVFYLRGPSARLNF
Sbjct: 20  QEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAARAYDTAVFYLRGPSARLNF 79

Query: 75  PDLI---VDHRLLDLSPSSIRQRAIEVGARVDAAA-----RHSKPTSHKPDLNRFPDPDS 130
           PDLI   +DH+LLD+SPSSIR+RAIEVGARVDAAA     R SKP S KPDLN+FP+P+S
Sbjct: 80  PDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAANRTSLRQSKPISEKPDLNQFPEPES 139

[Close]

BLAST of Sed0027523 vs. ExPASy Swiss-Prot
Match: Q8LC30 (Ethylene-responsive transcription factor RAP2-1 OS=Arabidopsis thaliana OX=3702 GN=RAP2-1 PE=2 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 3.2e-36
Identity = 87/146 (59.59%), Postives = 101/146 (69.18%), Query Frame = 0


Query: 2   EQEEAGESERRQ----------AEKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP 61
           EQEE+   +RRQ          A +KPYRGIR RKWGKWVAEIREPNKRSR+WLGSYTT 
Sbjct: 4   EQEESTMRKRRQPPQEEVPNHVATRKPYRGIRRRKWGKWVAEIREPNKRSRLWLGSYTTD 63

Query: 62  VAAARAYDTAVFYLRGPSARLNFPDLIV---DH----RLLDLSPSSIRQRAIEVGARVDA 121
           +AAARAYD AVFYLRGPSARLNFPDL++   DH       D+  + IR++A EVGARVDA
Sbjct: 64  IAAARAYDVAVFYLRGPSARLNFPDLLLQEEDHLSAATTADMPAALIREKAAEVGARVDA 123

Query: 122 -------AARHSKPTSHKPDLNRFPD 124
                  +  HS P   KPDLN+ P+
Sbjct: 124 LLASAAPSMAHSTPPVIKPDLNQIPE 149

[Close]

BLAST of Sed0027523 vs. ExPASy Swiss-Prot
Match: O22174 (Ethylene-responsive transcription factor ERF008 OS=Arabidopsis thaliana OX=3702 GN=ERF008 PE=2 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 2.0e-33
Identity = 80/146 (54.79%), Postives = 95/146 (65.07%), Query Frame = 0


Query: 12  RQAEKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSAR 71
           R+ + KPY+GIRMRKWGKWVAEIREPNKRSRIWLGSY TP AAARAYDTAVFYLRGPSAR
Sbjct: 21  RKRDLKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYATPEAAARAYDTAVFYLRGPSAR 80

Query: 72  LNFPDLIV-------DHRLLDLSPSSIRQRAIEVGARVDA-------------------- 129
           LNFP+L+          R  DLS + IR++A EVGA+VDA                    
Sbjct: 81  LNFPELLAGLTVSNGGGRGGDLSAAYIRRKAAEVGAQVDALGATVVVNTGGENRGDYEKI 140

[Close]

BLAST of Sed0027523 vs. ExPASy Swiss-Prot
Match: Q8W3M3 (Ethylene-responsive transcription factor RAP2-9 OS=Arabidopsis thaliana OX=3702 GN=RAP2-9 PE=2 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.3e-32
Identity = 73/116 (62.93%), Postives = 86/116 (74.14%), Query Frame = 0


Query: 14  AEKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLN 73
           + +K Y+GIRMRKWGKWVAEIREPNKRSRIWLGSY T VAAARAYDTAVFYLRGPSARLN
Sbjct: 31  SNEKRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYKTAVAAARAYDTAVFYLRGPSARLN 90

Query: 74  FPDLIV------DHRLLDLSPSSIRQRAIEVGARVDAAARHSKPTSHKPDLNRFPD 124
           FP+ +       +    D+SP+ IR++A EVGARVDA  R         D+N+ P+
Sbjct: 91  FPEEVFKDGNGGEGLGGDMSPTLIRKKAAEVGARVDAELRLENRMVENLDMNKLPE 146

[Close]

BLAST of Sed0027523 vs. ExPASy Swiss-Prot
Match: Q9SNE1 (Ethylene-responsive transcription factor ERF011 OS=Arabidopsis thaliana OX=3702 GN=ERF011 PE=2 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 2.8e-32
Identity = 73/135 (54.07%), Postives = 95/135 (70.37%), Query Frame = 0


Query: 12  RQAEKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSAR 71
           +   ++P++GIRMRKWGKWVAEIREPNKRSR+WLGSY+TP AAARAYDTAVFYLRGP+A 
Sbjct: 14  KMKRERPFKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTAT 73

Query: 72  LNFPDLIVDHRLLDLSPSSIRQRAIEVGARVDAAA-------RHSKPTSHK--------- 130
           LNFP+L+      D+S ++IR++A EVGA+VDA         +  +  S K         
Sbjct: 74  LNFPELLPCTSAEDMSAATIRKKATEVGAQVDAIGATVVQNNKRRRVFSQKRDFGGGLLE 133

[Close]

BLAST of Sed0027523 vs. ExPASy Swiss-Prot
Match: Q9FH94 (Ethylene-responsive transcription factor ERF010 OS=Arabidopsis thaliana OX=3702 GN=ERF010 PE=2 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 3.7e-32
Identity = 71/115 (61.74%), Postives = 89/115 (77.39%), Query Frame = 0


Query: 17  KPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPD 76
           +PY+GIRMRKWGKWVAEIREPNKRSR+WLGSY+TP AAARAYDTAVFYLRGP+ARLNFP+
Sbjct: 19  RPYKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTARLNFPE 78

Query: 77  LIVDHRLL--DLSPSSIRQRAIEVGARVDAAARHSKPTSHKP-DLNRFPDPDSSD 129
           L+   +    D+S ++IR++A EVGA+VDA     +   H+    NR  D D+ +
Sbjct: 79  LLPGEKFSDEDMSAATIRKKATEVGAQVDALGTAVQNNRHRVFGQNRDSDVDNKN 133

[Close]

BLAST of Sed0027523 vs. ExPASy TrEMBL
Match: A0A6J1KB24 (ethylene-responsive transcription factor RAP2-1-like OS=Cucurbita maxima OX=3661 GN=LOC111492253 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 3.8e-48
Identity = 102/123 (82.93%), Postives = 112/123 (91.06%), Query Frame = 0


Query: 15  EKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNF 74
           ++KPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP+AAARAYDTAVFYLRGPSARLNF
Sbjct: 20  QEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAARAYDTAVFYLRGPSARLNF 79

Query: 75  PDLI---VDHRLLDLSPSSIRQRAIEVGARVDAAA-----RHSKPTSHKPDLNRFPDPDS 130
           PDLI   +DH+LLD+SPSSIR+RAIEVGARVDAAA     R SKP S KPDLN+FP+P+S
Sbjct: 80  PDLILQDMDHQLLDVSPSSIRRRAIEVGARVDAAANRTSLRQSKPISEKPDLNQFPEPES 139

[Close]

BLAST of Sed0027523 vs. ExPASy TrEMBL
Match: A0A5A7V5C8 (Ethylene-responsive transcription factor RAP2-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00520 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 3.8e-48
Identity = 105/130 (80.77%), Postives = 117/130 (90.00%), Query Frame = 0


Query: 10  ERRQA--EKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRG 69
           +R+Q+  ++KPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP+AAARAYDTAVFYLRG
Sbjct: 12  KRKQSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAARAYDTAVFYLRG 71

Query: 70  PSARLNFPDLI---VDHRLLDLSPSSIRQRAIEVGARVDAAA-----RHSKPTSHKPDLN 129
           PSARLNFPDLI   +DH+LLD+SPSSIR+RAIEVGARVDAAA     R SKP S KPDLN
Sbjct: 72  PSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLRQSKPISDKPDLN 131

[Close]

BLAST of Sed0027523 vs. ExPASy TrEMBL
Match: A0A6J1HCJ9 (ethylene-responsive transcription factor RAP2-1-like OS=Cucurbita moschata OX=3662 GN=LOC111462838 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 3.8e-48
Identity = 102/123 (82.93%), Postives = 112/123 (91.06%), Query Frame = 0


Query: 15  EKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNF 74
           ++KPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP+AAARAYDTAVFYLRGPSARLNF
Sbjct: 20  QEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAARAYDTAVFYLRGPSARLNF 79

Query: 75  PDLI---VDHRLLDLSPSSIRQRAIEVGARVDAAA-----RHSKPTSHKPDLNRFPDPDS 130
           PDLI   +DH+LLD+SPSSIR+RAIEVGARVDAAA     R SKP S KPDLN+FP+P+S
Sbjct: 80  PDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAANRTSLRQSKPISEKPDLNQFPEPES 139

[Close]

BLAST of Sed0027523 vs. ExPASy TrEMBL
Match: A0A1S3BAR1 (ethylene-responsive transcription factor RAP2-1 OS=Cucumis melo OX=3656 GN=LOC103487870 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 3.8e-48
Identity = 105/130 (80.77%), Postives = 117/130 (90.00%), Query Frame = 0


Query: 10  ERRQA--EKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRG 69
           +R+Q+  ++KPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP+AAARAYDTAVFYLRG
Sbjct: 12  KRKQSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAARAYDTAVFYLRG 71

Query: 70  PSARLNFPDLI---VDHRLLDLSPSSIRQRAIEVGARVDAAA-----RHSKPTSHKPDLN 129
           PSARLNFPDLI   +DH+LLD+SPSSIR+RAIEVGARVDAAA     R SKP S KPDLN
Sbjct: 72  PSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLRQSKPISDKPDLN 131

[Close]

BLAST of Sed0027523 vs. ExPASy TrEMBL
Match: A0A0A0LR87 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G356600 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.5e-47
Identity = 104/130 (80.00%), Postives = 116/130 (89.23%), Query Frame = 0


Query: 10  ERRQA--EKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRG 69
           +R+Q+  ++KPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP+AAARAYDTAVFYLRG
Sbjct: 12  KRKQSGRQEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPLAAARAYDTAVFYLRG 71

Query: 70  PSARLNFPDLI---VDHRLLDLSPSSIRQRAIEVGARVDAAA-----RHSKPTSHKPDLN 129
           PSARLNFPDLI   +DH+LLD+SPSSIR+RAIEVGARVDAAA     R SKP S KPDLN
Sbjct: 72  PSARLNFPDLILQDMDHQLLDVSPSSIRKRAIEVGARVDAAAHQTSLRQSKPISDKPDLN 131

[Close]

BLAST of Sed0027523 vs. TAIR 10
Match: AT1G46768.1 (related to AP2 1 )

HSP 1 Score: 152.5 bits (384), Expect = 2.3e-37
Identity = 87/146 (59.59%), Postives = 101/146 (69.18%), Query Frame = 0


Query: 2   EQEEAGESERRQ----------AEKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTP 61
           EQEE+   +RRQ          A +KPYRGIR RKWGKWVAEIREPNKRSR+WLGSYTT 
Sbjct: 4   EQEESTMRKRRQPPQEEVPNHVATRKPYRGIRRRKWGKWVAEIREPNKRSRLWLGSYTTD 63

Query: 62  VAAARAYDTAVFYLRGPSARLNFPDLIV---DH----RLLDLSPSSIRQRAIEVGARVDA 121
           +AAARAYD AVFYLRGPSARLNFPDL++   DH       D+  + IR++A EVGARVDA
Sbjct: 64  IAAARAYDVAVFYLRGPSARLNFPDLLLQEEDHLSAATTADMPAALIREKAAEVGARVDA 123

Query: 122 -------AARHSKPTSHKPDLNRFPD 124
                  +  HS P   KPDLN+ P+
Sbjct: 124 LLASAAPSMAHSTPPVIKPDLNQIPE 149

[Close]

BLAST of Sed0027523 vs. TAIR 10
Match: AT2G23340.1 (DREB and EAR motif protein 3 )

HSP 1 Score: 143.3 bits (360), Expect = 1.4e-34
Identity = 80/146 (54.79%), Postives = 95/146 (65.07%), Query Frame = 0


Query: 12  RQAEKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSAR 71
           R+ + KPY+GIRMRKWGKWVAEIREPNKRSRIWLGSY TP AAARAYDTAVFYLRGPSAR
Sbjct: 21  RKRDLKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYATPEAAARAYDTAVFYLRGPSAR 80

Query: 72  LNFPDLIV-------DHRLLDLSPSSIRQRAIEVGARVDA-------------------- 129
           LNFP+L+          R  DLS + IR++A EVGA+VDA                    
Sbjct: 81  LNFPELLAGLTVSNGGGRGGDLSAAYIRRKAAEVGAQVDALGATVVVNTGGENRGDYEKI 140

[Close]

BLAST of Sed0027523 vs. TAIR 10
Match: AT4G06746.1 (related to AP2 9 )

HSP 1 Score: 140.6 bits (353), Expect = 9.0e-34
Identity = 73/116 (62.93%), Postives = 86/116 (74.14%), Query Frame = 0


Query: 14  AEKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLN 73
           + +K Y+GIRMRKWGKWVAEIREPNKRSRIWLGSY T VAAARAYDTAVFYLRGPSARLN
Sbjct: 31  SNEKRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYKTAVAAARAYDTAVFYLRGPSARLN 90

Query: 74  FPDLIV------DHRLLDLSPSSIRQRAIEVGARVDAAARHSKPTSHKPDLNRFPD 124
           FP+ +       +    D+SP+ IR++A EVGARVDA  R         D+N+ P+
Sbjct: 91  FPEEVFKDGNGGEGLGGDMSPTLIRKKAAEVGARVDAELRLENRMVENLDMNKLPE 146

[Close]

BLAST of Sed0027523 vs. TAIR 10
Match: AT3G50260.1 (cooperatively regulated by ethylene and jasmonate 1 )

HSP 1 Score: 139.4 bits (350), Expect = 2.0e-33
Identity = 73/135 (54.07%), Postives = 95/135 (70.37%), Query Frame = 0


Query: 12  RQAEKKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSAR 71
           +   ++P++GIRMRKWGKWVAEIREPNKRSR+WLGSY+TP AAARAYDTAVFYLRGP+A 
Sbjct: 14  KMKRERPFKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTAT 73

Query: 72  LNFPDLIVDHRLLDLSPSSIRQRAIEVGARVDAAA-------RHSKPTSHK--------- 130
           LNFP+L+      D+S ++IR++A EVGA+VDA         +  +  S K         
Sbjct: 74  LNFPELLPCTSAEDMSAATIRKKATEVGAQVDAIGATVVQNNKRRRVFSQKRDFGGGLLE 133

[Close]

BLAST of Sed0027523 vs. TAIR 10
Match: AT5G67190.1 (DREB and EAR motif protein 2 )

HSP 1 Score: 139.0 bits (349), Expect = 2.6e-33
Identity = 71/115 (61.74%), Postives = 89/115 (77.39%), Query Frame = 0


Query: 17  KPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPVAAARAYDTAVFYLRGPSARLNFPD 76
           +PY+GIRMRKWGKWVAEIREPNKRSR+WLGSY+TP AAARAYDTAVFYLRGP+ARLNFP+
Sbjct: 19  RPYKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTARLNFPE 78

Query: 77  LIVDHRLL--DLSPSSIRQRAIEVGARVDAAARHSKPTSHKP-DLNRFPDPDSSD 129
           L+   +    D+S ++IR++A EVGA+VDA     +   H+    NR  D D+ +
Sbjct: 79  LLPGEKFSDEDMSAATIRKKATEVGAQVDALGTAVQNNRHRVFGQNRDSDVDNKN 133

The following BLAST results are available for this feature:

BLAST of Sed0027523 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884237.1	3.5e-48	83.74	ethylene-responsive transcription factor RAP2-1-like [Benincasa hispida]	[more]
XP_022997304.1	7.9e-48	82.93	ethylene-responsive transcription factor RAP2-1-like [Cucurbita maxima]	[more]
XP_008444599.1	7.9e-48	80.77	PREDICTED: ethylene-responsive transcription factor RAP2-1 [Cucumis melo] >KAA00...	[more]
KAG7029328.1	7.9e-48	82.93	Ethylene-responsive transcription factor RAP2-1, partial [Cucurbita argyrosperma...	[more]
XP_022962377.1	7.9e-48	82.93	ethylene-responsive transcription factor RAP2-1-like [Cucurbita moschata] >XP_02...	[more]

BLAST of Sed0027523 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LC30	3.2e-36	59.59	Ethylene-responsive transcription factor RAP2-1 OS=Arabidopsis thaliana OX=3702 ...	[more]
O22174	2.0e-33	54.79	Ethylene-responsive transcription factor ERF008 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q8W3M3	1.3e-32	62.93	Ethylene-responsive transcription factor RAP2-9 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SNE1	2.8e-32	54.07	Ethylene-responsive transcription factor ERF011 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9FH94	3.7e-32	61.74	Ethylene-responsive transcription factor ERF010 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Sed0027523 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KB24	3.8e-48	82.93	ethylene-responsive transcription factor RAP2-1-like OS=Cucurbita maxima OX=3661...	[more]
A0A5A7V5C8	3.8e-48	80.77	Ethylene-responsive transcription factor RAP2-1 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A6J1HCJ9	3.8e-48	82.93	ethylene-responsive transcription factor RAP2-1-like OS=Cucurbita moschata OX=36...	[more]
A0A1S3BAR1	3.8e-48	80.77	ethylene-responsive transcription factor RAP2-1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0LR87	2.5e-47	80.00	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G356600 PE=...	[more]

BLAST of Sed0027523 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G46768.1	2.3e-37	59.59	related to AP2 1	[more]
AT2G23340.1	1.4e-34	54.79	DREB and EAR motif protein 3	[more]
AT4G06746.1	9.0e-34	62.93	related to AP2 9	[more]
AT3G50260.1	2.0e-33	54.07	cooperatively regulated by ethylene and jasmonate 1	[more]
AT5G67190.1	2.6e-33	61.74	DREB and EAR motif protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 57..77 score: 52.99 coord: 19..30 score: 64.24
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 18..81 e-value: 5.2E-36 score: 135.6
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 19..67 e-value: 1.6E-11 score: 44.3
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 18..75 score: 22.128345
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 19..77 e-value: 5.60451E-27 score: 93.105
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 17..76 e-value: 4.1E-25 score: 89.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 102..130
None	No IPR available	PANTHER	PTHR31729	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED	coord: 8..128
None	No IPR available	PANTHER	PTHR31729:SF2	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED	coord: 8..128
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 18..76

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0027523.1	Sed0027523.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity