Sed0027499 (gene) Chayote v1

Overview


Name	Sed0027499
Type	gene
Organism	Sechium edule (Chayote v1)
Description	RING-type domain-containing protein
Location	LG04: 44084930 .. 44091668 (+)
RNA-Seq Expression	Sed0027499
Synteny	Sed0027499

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGTAATTTGATGTGAAATTGAGATCTTACTACAAAAATTCTGCTCGATCATTTCTTAATCATACATTCAGAAAAAACAGCGTTAACATTTTGTTTTACTGACTTCTTGTTCTTTAATTAAATATGCATATGATTCGTTTGAGTTGCAGACTTTTGGATGGACTCTTCAAGAGGCTAAACTGCATATGGTTCCTGATTATTTCAGCAATGCAGAGGTAAGCAACCTCAGTGAATCCTAAGTAACTCTGCCGTAATTGAAATAGAAAATTGAAATTTTAAAAAGCAGCAGAAGAGAGAAAAAAATGTTGTAAAGCTTGCTGCTTTCCTGCTCTTCGAATTTGAATTTCTTTTTCATTTCTCTTGCAAGCCTTTTCACATTAGCTTATATGTTCTGTACTTCTGTTCTACCTCCAATTAAGTTTGTTTACCGTTACTTTGAAACATTGTTTTCATTTTTGTGTCACACATCTTTGTACCAGAACGATATCTGAATTGTGCAGAAGTTCTACTCTATCTAATAGTTTGGTATTTGATTACTTTGTTATGCATCCTTGTACCAGAAAGTTAATTGAAATGTGCCGAAGTCCTTTCAATTGCTCTATGAAAGTATGAGTTTTCATGAAAAAGATTAAGGTTAAAAGTATCATTTTGGTCTTAGCTTCTGAAACTTACCTACGTTCCATCAAGATGTCTAAATTTTGCCACAGTATTTCCAATTTTTCTTAAAATTAGTCTCTTCCATTCATTTATGATATGTTACAAACCTATAAAAAAGTGTTACAGAAAACTATGCCACATAAAATTAAAGTGGATATAGTTTCATCGAATAAAGACATATAACTCTTGATGGTGATTTCAAGGTAGAACAAAGCCCTATAGTTCTTCAATAACTTGTTACGATATGTATTAACATGAAAATATAAAGAAACACGACAAGCTACCTGATATGATACGTTCGAGAGTATCGGTCCCCTCGCCTTCCGAGGTCTAAACCTTACACAAAAGTAATCCTCTCAACCCACAAAACTCTCCCCACTAGAATAACCACCTCACATGGACGTACCAACTGTCTCCCCTAAAATACTCTCTTTACCCCCCCTTATACAATATTTTTGTGTAAATTGGGGTCTTATTTTCAAGTTTATTTTCTTTGACACCATCGACAAGAAAATGTCTCAGCTACAAGTAGGAAGATGAACATCCAACTTAAACTGCAAGACAGTGAATTCTTTTGTTGCAAGATATCACCAGTGTTTGAACTTCTATTTTTGAGACGGAAACACTTCTATAGAAACACAAAGTGGCAAAAGAGAGAGTAACAAACTGGGTCTCTCCCCTAGGATAGAGGTTATAACAAAACACCTTCCAATATTTAGGAACTATCACTGTTCATTTGCGGCCCCGTGGGAACCTGCTCCGTGAGGGAGAAGGGAAAAGTTCATGTGAGCTTAACACGGGGATGGGGAATACATTTAGTATCCCAGCTTCTTTATCTATCCCCTCTCTGTTTGCCAATTGTTTTCTTTTTTTTGTTATTAGATATACATATATGTACATACATGCGCGCGTACACTCATAAATATATTTAAATTTTAAGGTTTTATTGTTTAATTACTTGCATAATTTGATGTACTCGAATTTTTTGCTTGAACATTTGGACTACGTATGGATACTTGCATAATTTGATAGGCAATGCCATTTTGTTTGTTTAAGAGGTTTAATAAATTTCTCTTTAAATGGAGATTGTACGTTGAAATTAGCCATTTTAACTGCAAATTTCCAATAGGAAATTAGCTGTTGGTTGATATAATTAAATTTACCCCAATCCATCAGCTTAGGCTTTTGGATTGATTGGTGGTTTAACATAATTCAACATTAGCCATCTAAGTGAAAACTTTCAATGGAATCCATTCTTTTTTTTAAAAGACTAGTTGGGGAGTAGTTTTCTACATGATACCAGAAAATTTTAACAGAGAATTTTGCAGGACGGAGAATTAAATGAGTAGGGATGAAGACAAGGAAATTTCTGTCTGTCTCCACCTTGTCGTGTGGATATCTCTCCCGTGTTTGAACTTCTCAAAGCAAAAAAATGGAGAAACTTTGAGTTTAGGTCACGCCTTATCAGTATCCCACAAGGCCATAACTCTCATAGATGATATAAAGGGGCATGAGAATGATAGTTGAAATAGTTTACCCATAACTATTAATAGACCAAAGTCTTCGACTATCCCAGAGATCATGCACTCCAGAATTCACCTTGCCAATGGAAGAGAAACCAGAAGCAATATGCACTGCATTGTGATTAAAAGAAAAAAGAGATGAGGTAATAAGAATTAGGAAGAAGTCCCCGAGGGGTGGCACAAGTAGTTGAAGATTTGGAATTTGAAGGTGTATTTCCCTCAAGGTCCCAGGTTCGAAACTCACTTGTGACAATAATTTGTAGACACCTCTCGAACTCTATTCCTTCGATGTCTCCCAGTGTTTGGCCTAGGGACAGGCGTGGTTGCCCCGAGTATAGTGGAGCGAAGCTCCGATTTCTCAGTTTCAAAGAAAGAATTAGGAAGAAGATATCTCAATTCAAGCTTTTCCCTTGAACTGAATTTTGAGTGTGTTGCCCAGGGAAAACTTGCATGGAATGGAATCAATAATATTATCATTTATCAGCAAGTGTTCCCCTTCCTTTCCTCCTTCGTTTCCTTCAACCCACAGCATGCCTGCCTGATTCACAACTTAACCCTAAAATCAAGTTCAAGGGAAAGAACTGCACGTACTCCTTTTTTGGCATCTAATATATGAGTTTGCCCGTTGTTTAAGTATGTTGTGCTGGTAAATGTTTTAGTCTTTCTTAGATGTTATGGACATTGGCAAAACTTTTTTTGTAATTATACTCTAGGTTGGTCTTATGAGGTCATTTTTGTAGGTCACCACCCATTTTTTGTGGGTTTTTATTTTTGTATGCCATTGTATTCTTTCAAGTTTTCATTAATGAAGACATTTGTTTTTAGTATAAATTGGGAGAGGGAGACCATAAACCCTACATAAAAGGTACAACTGCTCTCGTATAAATGAGTAAAATATCAATCCTCATTAACGACGACATTTCTTGGAGAGGACAGGAATGTAAGTTACTCATTGTCTGAACGAATTACGTGGCTCACGTTTTTGCATTGGTGCTTTATTACAACCTTGTAGTTTTCTCTTCTTTGGGGTGAGATGGCATTCATTGACACACTGAAATCCACAGATGATACGTATATTGGATACGCGTGAGCACAATCACATTGCTTTTATGGTGGAGTTTCCCCCATCTACAATCATATGTTCAGTTTGAACACTCCTTAGCCCTGATTGTTACTTATTCTTCACGATGATGGAATTTGAATTGTATATATATGGGACCTAAAAGTCTCTCGTATTTCTAGGACCCACTATGGTTTTTCACTTGTCAGTATGTGGAAATGGGGCTGTTATAATCTGAAGCATATTACTACACCGCAAAATGGTCTTTAAGGGTGGCATAGTGATCGAAGGCTTTGGCTATGGATGGTGTGCTTACCTCAAGATCTCAGGTTTGAGATTCACCTGTGACATTAATTTGTAGATATCTCACATGTCTTCAATCCTTCGATGTTTCCTAGTGTCTGGCCTAGGAACGGGCGTGATTATTTCGAATATAGTGGAGCGAAGTTCCATTATATCGATTTCCAAAACAAAAAAAAAAATACTGTTAATGACCTTAGTTCAAGAGGATCGATTTATAGGTGGTAGTTACTATATTGTATAAGATGTTACTTGAACTTTCCCTCACCCTCATTGTTGTCGATCTCTTTTTCTTATTAATTATGAGTTTCTTTTTGGCTTACAGGTACAGGTAGATTTAGGGACTAACTCAATAATTTCAATATAAGGTCAGAGCCTCCTACCTTGGTTTCTCATATGGCATGTGATCATTCTCTAATTAGATCATCTTCTTCCCTCTTTTCAAAACCAAAATCCGTACTAAATATTGAGCACGATTGTCCCTAAGGGGTGGCATAATGGATGAAGACTTTGGCTTTGAAGGTATGCTCTCTTCAAGATCTTGGATTCGAGACTCACCTATGACATTACTCCTTCGATGTCTCTAGAGCCTAGTCTAGAGACGGGCGTGGTTACCCTTGTTTCAAATATTGAGCACGTTTAATTTGAGATATATATGGATCACAACACTTGCATGATTAGTCACCTATATTCCTTCATTGGTGTCAATTGCATAACCTCATTGTCTTCTGTTTGTAATGACAGTTGAAAAATTGGGTTGATTGCAGGAACAGAGCTTGCAGTCGCAGCTGTGATACTAACATGTGGAGTATTTGTTCAATTTCTGAAGTGGAAGGTTTTGATTTAAATTTGTGTGTATTCATGGATTTTTTAGAATCGTAGAGAAATTTATTTGTAGACAGTTTCATAATGAGGCCATAATAAGAGAAAAGTAGCCTTTTGTAGGCAAGGTAGGTAAAAGTAAACTTGGGGTTTATTTGAACATGCATTTTCTTTTCATAGAAAAGAAATTACTTGAAAGAAAGTGTAAAGAAACATCTTTTATGGAGACACTGTTCACCTTTGATTCATTATGGCCAATTTCAACTTTTTGGACAAAAGGTGGGTCGGAAACCCCCTAAAATTAAGTAGGAAGGAGAAGAAACGTGCCGGATTTATTGGCTTTTGCCTTCTTTTTCTTCGAATGAACTCGCCGCAAAGCAGTAGAAAATTGGCATCATTATGGTTTTAGGAGCTAGCTTGCTCAATGGCCATAATTAAGAACAAGGTGGCCTCCCCCTTTCCAAGTTTACACTTTGCCTTTATTCATCTTCTCCAAGTTACCAAGGGCTCCATAAAGTAAAAAAGTAGCACAGAAGTAGTTTCGGACTATTTCAATTTCATATGAGCTATCATGTTCATTAGAGACTATCCCATTCTCTATTCAAGTATAGATTTTGATATCTCCAAGGAGTGACGCAGTAGTTGAAGACTTGGAAGTTGAGAATATGCTTCCCTCACGGTCCTGAGTTCGAGATTCACTTGTGACATTACTCTTTTCATGTCTCTGGTGTCTAGTTTAGGGACGAGCGTGGTTACTCTTAGTTCAAAAAAAGAAGTATAGATTTTGATTTCTAGAACGTGTTAACTTCAAGAATCTTTTCCCATAATTAGATTTGTGTTTGTAAGGATTAAAGCTTAGAAATGAGACGTGATGATCCCAAAGACTATTCTGCATTGACAATCTTTTGCTGGCTTGAGATACGTGAGAATCATATACACTGTTCAGGATGGTGGGTTGTTGAAGAAAATATGCAATATACACCATTTGTATTTATCATAGACTTAGAAGAGTAAATGCCTAAATGGTGCATTCTCTCACTAGAGAGATTAGCTTGAATGGCGCATAGTGGACAAATTTGAATTAGTTACTTTCCAACCCACCAGGAGTCTTTGCGATCGATAGAAATAGATAAATAGATATCAATTTTCAACAGAGCTATCAATCAAGGCGGGTCCCCTTTTCCATATAGATAAAAATTGATGCCTGCAGTTTTATTGCTTTACTCTCTCTTCATTCTCTCTGCTGTGGCGCTCCCCCCTCCACTCCAATGCCAGCCCCCTCTAAGTTTTTGATCCATCAGCCACACTAACTCAACCATGGCACACATCCTTTAGCTCAGTTCCTGAAGATCTACAAAACCCAGAACTGGTTAGTATTAGTAAGATCATCTTCATTACTAATTTTCTCTGTTCTTTGATCTGAAAAAAAGGAAACATTTTTATGCATTCTTCTTTCTGGGTTTGTTATCTTCTCTAACACCTGATATAGCTGACACCATTTTATCGTTGATTTCATCGGAATTCCTTTGTGGGTCTTTTCTGTATCAGTCCAGTGGCTTTGAGGAAATTATGGAGAGGTCAAATGAAGGGCGGAGATGGGCCAATTTGAAGCAACGGCTAGGATTGAAGGGGATGGGGTGCTGTGGAGGTTCATGGAGTCCAACGTCATCAACTCTGACGATGATGGAAGGGATCGGCTTGAGCCGCCATGGCAGCAGCCGGAGCCGCAGAGAAGATGAGGCTCGGAGCTCTGCAGCTTCGGGCATGAACCTGGCCATGGCTCTGGCGGCGGAGAGGAACATGAGGTCCGGCGAAGTGGGCCCCACCGGCGCCGGCGACGTGAAGTCGCTGGTGAGATTGTTTGAAGAAATGGACGGTGGAGATTGGAAGACAAGAAGAAAGGAGAGCAAGGGCGGCGATTGGATGTGCTGCGTGTGCATGGAGAGGAGTAAAGGTGCGGCTTTTATTCCCTGTGGACACACCTTTTGTAGGGTTTGTTCTAGGGAACTATGGCTCAACCGAGGCACGTGTCCTATTTGCAACCGTTCGATCATTGAGATTCTTGATATTTTTTAAGAGGCAAAGAAAATTCATTTTCGTTTTTTCTTCAATTTATTATCTTTATGTGATCTTTGTTTTATATGAAATGATTGAAAGAAAGGATAAGGGGAAGCACGTGGTATTGAGATTGCATGATCCAAAGATGCATTGGGACAAATTTGTTCTTCCCCTCAAGAACATAATTACCATGATTCATATGCGAATGAATCTGATTATAATTTTTGTCAAGATTGGATCCTAGATCTTGATAGGATCAGGATCTGTTAAATATTCATTTCTAGTTTTGCTTTACTTGTTTGGATCAAATCGATTCTTC

mRNA sequence

GGGTAATTTGATGTGAAATTGAGATCTTACTACAAAAATTCTGCTCGATCATTTCTTAATCATACATTCAGAAAAAACAGCGTTAACATTTTGTTTTACTGACTTCTTGTTCTTTAATTAAATATGCATATGATTCGTTTGAGTTGCAGACTTTTGGATGGACTCTTCAAGAGGCTAAACTGCATATGGTTCCTGATTATTTCAGCAATGCAGAGGTACAGGTAGATTTAGGGACTAACTCAATAATTTCAATATAAGGAACAGAGCTTGCAGTCGCAGCTGTGATACTAACATGTGGAGTATTTGTTCAATTTCTGAAGTGGAAGGTTTTGATTTAAATTTGTGTGTATTCATGGATTTTTTAGAATCGTAGAGAAATTTATTTGTAGACAGTTTCATAATGAGGCCATAATAAGAGAAAAGTAGCCTTTTGTAGGCAAGGTAGGTAAAAGTAAACTTGGGGTTTATTTGAACATGCATTTTCTTTTCATAGAAAAGAAATTACTTGAAAGAAAGTGTAAAGAAACATCTTTTATGGAGACACTGTTCACCTTTGATTCATTATGGCCAATTTCAACTTTTTGGACAAAAGGTGGGTCGGAAACCCCCTAAAATTAAGTAGGAAGGAGAAGAAACGTGCCGGATTTATTGGCTTTTGCCTTCTTTTTCTTCGAATGAACTCGCCGCAAAGCAGTAGAAAATTGGCATCATTATGGTTTTAGGAGCTAGCTTGCTCAATGGCCATAATTAAGAACAAGGTGGCCTCCCCCTTTCCAAGTTTACACTTTGCCTTTATTCATCTTCTCCAAGTTACCAAGGGCTCCATAAAGTAAAAAAGTAGCACAGAAGTAGTTTCGGACTATTTCAATTTCATATGAGCTATCATGTTCATTAGAGACTATCCCATTCTCTATTCAAGTATAGATTTTGATATCTCCAAGGAGTGACGCAGTAGTTGAAGACTTGGAAGTTGAGAATATGCTTCCCTCACGGTCCTGAGTTCGAGATTCACTTGTGACATTACTCTTTTCATGTCTCTGGTGTCTAGTTTAGGGACGAGCGTGGTTACTCTTAGTTCAAAAAAAGAAGTATAGATTTTGATTTCTAGAACGTGTTAACTTCAAGAATCTTTTCCCATAATTAGATTTGTGTTTGTAAGGATTAAAGCTTAGAAATGAGACGTGATGATCCCAAAGACTATTCTGCATTGACAATCTTTTGCTGGCTTGAGATACGTGAGAATCATATACACTGTTCAGGATGGTGGGTTGTTGAAGAAAATATGCAATATACACCATTTGTATTTATCATAGACTTAGAAGAGTAAATGCCTAAATGGTGCATTCTCTCACTAGAGAGATTAGCTTGAATGGCGCATAGTGGACAAATTTGAATTAGTTACTTTCCAACCCACCAGGAGTCTTTGCGATCGATAGAAATAGATAAATAGATATCAATTTTCAACAGAGCTATCAATCAAGGCGGGTCCCCTTTTCCATATAGATAAAAATTGATGCCTGCAGTTTTATTGCTTTACTCTCTCTTCATTCTCTCTGCTGTGGCGCTCCCCCCTCCACTCCAATGCCAGCCCCCTCTAAGTTTTTGATCCATCAGCCACACTAACTCAACCATGGCACACATCCTTTAGCTCAGTTCCTGAAGATCTACAAAACCCAGAACTGGTTAGTATTAGTAAGATCATCTTCATTACTAATTTTCTCTGTTCTTTGATCTGAAAAAAAGGAAACATTTTTATGCATTCTTCTTTCTGGGTTTGTTATCTTCTCTAACACCTGATATAGCTGACACCATTTTATCGTTGATTTCATCGGAATTCCTTTGTGGGTCTTTTCTGTATCAGTCCAGTGGCTTTGAGGAAATTATGGAGAGGTCAAATGAAGGGCGGAGATGGGCCAATTTGAAGCAACGGCTAGGATTGAAGGGGATGGGGTGCTGTGGAGGTTCATGGAGTCCAACGTCATCAACTCTGACGATGATGGAAGGGATCGGCTTGAGCCGCCATGGCAGCAGCCGGAGCCGCAGAGAAGATGAGGCTCGGAGCTCTGCAGCTTCGGGCATGAACCTGGCCATGGCTCTGGCGGCGGAGAGGAACATGAGGTCCGGCGAAGTGGGCCCCACCGGCGCCGGCGACGTGAAGTCGCTGGTGAGATTGTTTGAAGAAATGGACGGTGGAGATTGGAAGACAAGAAGAAAGGAGAGCAAGGGCGGCGATTGGATGTGCTGCGTGTGCATGGAGAGGAGTAAAGGTGCGGCTTTTATTCCCTGTGGACACACCTTTTGTAGGGTTTGTTCTAGGGAACTATGGCTCAACCGAGGCACGTGTCCTATTTGCAACCGTTCGATCATTGAGATTCTTGATATTTTTTAAGAGGCAAAGAAAATTCATTTTCGTTTTTTCTTCAATTTATTATCTTTATGTGATCTTTGTTTTATATGAAATGATTGAAAGAAAGGATAAGGGGAAGCACGTGGTATTGAGATTGCATGATCCAAAGATGCATTGGGACAAATTTGTTCTTCCCCTCAAGAACATAATTACCATGATTCATATGCGAATGAATCTGATTATAATTTTTGTCAAGATTGGATCCTAGATCTTGATAGGATCAGGATCTGTTAAATATTCATTTCTAGTTTTGCTTTACTTGTTTGGATCAAATCGATTCTTC

Coding sequence (CDS)

ATGGAGAGGTCAAATGAAGGGCGGAGATGGGCCAATTTGAAGCAACGGCTAGGATTGAAGGGGATGGGGTGCTGTGGAGGTTCATGGAGTCCAACGTCATCAACTCTGACGATGATGGAAGGGATCGGCTTGAGCCGCCATGGCAGCAGCCGGAGCCGCAGAGAAGATGAGGCTCGGAGCTCTGCAGCTTCGGGCATGAACCTGGCCATGGCTCTGGCGGCGGAGAGGAACATGAGGTCCGGCGAAGTGGGCCCCACCGGCGCCGGCGACGTGAAGTCGCTGGTGAGATTGTTTGAAGAAATGGACGGTGGAGATTGGAAGACAAGAAGAAAGGAGAGCAAGGGCGGCGATTGGATGTGCTGCGTGTGCATGGAGAGGAGTAAAGGTGCGGCTTTTATTCCCTGTGGACACACCTTTTGTAGGGTTTGTTCTAGGGAACTATGGCTCAACCGAGGCACGTGTCCTATTTGCAACCGTTCGATCATTGAGATTCTTGATATTTTTTAA

Protein sequence

MERSNEGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMMEGIGLSRHGSSRSRREDEARSSAASGMNLAMALAAERNMRSGEVGPTGAGDVKSLVRLFEEMDGGDWKTRRKESKGGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF

Homology

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BLAST of Sed0027499 vs. NCBI nr
Match: XP_022953088.1 (RNA-binding protein MEX3B-like [Cucurbita moschata] >XP_022953089.1 RNA-binding protein MEX3B-like [Cucurbita moschata] >XP_022969345.1 RNA-binding protein MEX3B-like [Cucurbita maxima] >XP_022969346.1 RNA-binding protein MEX3B-like [Cucurbita maxima] >XP_023511758.1 RNA-binding protein MEX3B-like [Cucurbita pepo subsp. pepo] >XP_023511759.1 RNA-binding protein MEX3B-like [Cucurbita pepo subsp. pepo] >KAG6572419.1 hypothetical protein SDJN03_29147, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 313.5 bits (802), Expect = 1.1e-81
Identity = 151/169 (89.35%), Postives = 160/169 (94.67%), Query Frame = 0


Query: 1   MERSNEGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMMEGIGLSRHGSSRSRREDEARS 60
           MER N GRRWANLKQRLGLKGMGCCGGSWSPTSSTLTM+EG+ LSRHGSSRS RED ARS
Sbjct: 1   MERQNGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGLSLSRHGSSRSHREDGARS 60

Query: 61  SAASGMNLAMALAAERNMRSGEVGPTGAGDVKSLVRLFEEMDGGDWKTRRKESKG-GDWM 120
           SA+SG+NLAMALAAERN+R+ E GPTGAGDVKSL+RLFEEMDGGDWKT+RKES+  GDWM
Sbjct: 61  SASSGVNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFEEMDGGDWKTKRKESENTGDWM 120

Query: 121 CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF 169
           CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF
Sbjct: 121 CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF 169

[Close]

BLAST of Sed0027499 vs. NCBI nr
Match: KAA0061653.1 (zf-C3HC4_3 domain-containing protein [Cucumis melo var. makuwa] >TYK05853.1 zf-C3HC4_3 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 305.1 bits (780), Expect = 3.8e-79
Identity = 148/169 (87.57%), Postives = 156/169 (92.31%), Query Frame = 0


Query: 1   MERSNEGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMMEGIGLSRHGSSRSRREDEARS 60
           MER+N GRRWANLKQRLGLKGMGCC GSWSPTSSTLTM+EG  LS HGSSRS+RED  RS
Sbjct: 1   MERANRGRRWANLKQRLGLKGMGCCRGSWSPTSSTLTMIEGFSLSLHGSSRSQREDGGRS 60

Query: 61  SAASGMNLAMALAAERNMRSGEVGPTGAGDVKSLVRLFEEMDGGDWKTRRKESK-GGDWM 120
           SAASGMNLAMALAAERN+RS E GPTGA DVKSL+RLFEEMDGGDWKT+RKE +  GDWM
Sbjct: 61  SAASGMNLAMALAAERNLRSDEGGPTGASDVKSLMRLFEEMDGGDWKTKRKEGENNGDWM 120

Query: 121 CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF 169
           CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPIC+RSIIEILDIF
Sbjct: 121 CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF 169

[Close]

BLAST of Sed0027499 vs. NCBI nr
Match: KGN47968.1 (hypothetical protein Csa_002927 [Cucumis sativus])

HSP 1 Score: 295.4 bits (755), Expect = 3.0e-76
Identity = 143/169 (84.62%), Postives = 153/169 (90.53%), Query Frame = 0


Query: 1   MERSNEGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMMEGIGLSRHGSSRSRREDEARS 60
           MER+N  RRW NL+QRLGLKGMGCC GSWSPTSSTLTM+EG  LS HGSSRS+ ED  RS
Sbjct: 1   MERANRRRRWTNLRQRLGLKGMGCCRGSWSPTSSTLTMIEGFSLSLHGSSRSQGEDGGRS 60

Query: 61  SAASGMNLAMALAAERNMRSGEVGPTGAGDVKSLVRLFEEMDGGDWKTRRKESK-GGDWM 120
           SAASGMNLAMALAAERN+R+ E GPTG  DVKSL+RLFEEMDGGDWKT+RKES+  GDWM
Sbjct: 61  SAASGMNLAMALAAERNLRNDEGGPTGGSDVKSLMRLFEEMDGGDWKTKRKESENNGDWM 120

Query: 121 CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF 169
           CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPIC+RSIIEILDIF
Sbjct: 121 CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF 169

[Close]

BLAST of Sed0027499 vs. NCBI nr
Match: XP_023531397.1 (uncharacterized protein LOC111793648 [Cucurbita pepo subsp. pepo] >XP_023531398.1 uncharacterized protein LOC111793648 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 283.5 bits (724), Expect = 1.2e-72
Identity = 143/170 (84.12%), Postives = 155/170 (91.18%), Query Frame = 0


Query: 1   MERSNEGRRWANLKQRLGL-KGMGCCGGSWSPTSSTLTMMEGIGLSRHGSSRSRREDEAR 60
           MER N G+RWANLKQRLGL KGMGCCGGSWS TSSTLTM++GIGLSRHGSSRS R+D  R
Sbjct: 62  MERPNRGQRWANLKQRLGLMKGMGCCGGSWSSTSSTLTMIDGIGLSRHGSSRSHRDDGTR 121

Query: 61  SSAASGMNLAMALAAERNMRSGEVGPTGAGDVKSLVRLFEEMDGGDWKTRRKESK-GGDW 120
           SSAASGMNLAMALAAERN+ + E GPT  G+VKSL+RLFEE+DGGDWKTRRKES+  GDW
Sbjct: 122 SSAASGMNLAMALAAERNL-TEEGGPT-VGNVKSLMRLFEEIDGGDWKTRRKESENNGDW 181

Query: 121 MCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF 169
           +CCVCMERSKGAAFIPCGHTFCRVCSRELWLN GTCPIC+RSIIEILDIF
Sbjct: 182 LCCVCMERSKGAAFIPCGHTFCRVCSRELWLNGGTCPICSRSIIEILDIF 229

[Close]

BLAST of Sed0027499 vs. NCBI nr
Match: KAG6589274.1 (hypothetical protein SDJN03_17839, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 283.5 bits (724), Expect = 1.2e-72
Identity = 143/170 (84.12%), Postives = 155/170 (91.18%), Query Frame = 0


Query: 1   MERSNEGRRWANLKQRLGL-KGMGCCGGSWSPTSSTLTMMEGIGLSRHGSSRSRREDEAR 60
           MER N G+RWANLKQRLGL KGMGCCGGSWS TSSTLTM++GIGLSRHGSSRS R+D  R
Sbjct: 62  MERPNRGQRWANLKQRLGLMKGMGCCGGSWSSTSSTLTMIDGIGLSRHGSSRSHRDDGTR 121

Query: 61  SSAASGMNLAMALAAERNMRSGEVGPTGAGDVKSLVRLFEEMDGGDWKTRRKESK-GGDW 120
           SSAASGMNLAMALAAERN+ + E GPT  G+VKSL+RLFEE+DGGDWKTRRKES+  GDW
Sbjct: 122 SSAASGMNLAMALAAERNL-TEEGGPT-VGNVKSLMRLFEEIDGGDWKTRRKESENNGDW 181

Query: 121 MCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF 169
           +CCVCMERSKGAAFIPCGHTFCRVCSRELWLN GTCPIC+RSIIEILDIF
Sbjct: 182 LCCVCMERSKGAAFIPCGHTFCRVCSRELWLNGGTCPICSRSIIEILDIF 229

[Close]

BLAST of Sed0027499 vs. ExPASy Swiss-Prot
Match: B3H754 (E3 ubiquitin-protein ligase APD3 OS=Arabidopsis thaliana OX=3702 GN=APD3 PE=2 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 2.5e-04
Identity = 16/51 (31.37%), Postives = 28/51 (54.90%), Query Frame = 0


Query: 119 MCCVCMERSKGAAFIPCGH-TFCRVCSRELWLNRGTCPICNRSIIEILDIF 169
           +C +C +  +   F+PCGH   C  C  ++   +G CPIC + +I +  I+
Sbjct: 352 LCAICFDAPRDCCFLPCGHCVSCYQCGTKIKRTKGRCPICRKKMIHVKRIY 402

[Close]

BLAST of Sed0027499 vs. ExPASy TrEMBL
Match: A0A6J1HXI8 (RNA-binding protein MEX3B-like OS=Cucurbita maxima OX=3661 GN=LOC111468383 PE=4 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 5.2e-82
Identity = 151/169 (89.35%), Postives = 160/169 (94.67%), Query Frame = 0


Query: 1   MERSNEGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMMEGIGLSRHGSSRSRREDEARS 60
           MER N GRRWANLKQRLGLKGMGCCGGSWSPTSSTLTM+EG+ LSRHGSSRS RED ARS
Sbjct: 1   MERQNGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGLSLSRHGSSRSHREDGARS 60

Query: 61  SAASGMNLAMALAAERNMRSGEVGPTGAGDVKSLVRLFEEMDGGDWKTRRKESKG-GDWM 120
           SA+SG+NLAMALAAERN+R+ E GPTGAGDVKSL+RLFEEMDGGDWKT+RKES+  GDWM
Sbjct: 61  SASSGVNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFEEMDGGDWKTKRKESENTGDWM 120

Query: 121 CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF 169
           CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF
Sbjct: 121 CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF 169

[Close]

BLAST of Sed0027499 vs. ExPASy TrEMBL
Match: A0A6J1GME5 (RNA-binding protein MEX3B-like OS=Cucurbita moschata OX=3662 GN=LOC111455597 PE=4 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 5.2e-82
Identity = 151/169 (89.35%), Postives = 160/169 (94.67%), Query Frame = 0


Query: 1   MERSNEGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMMEGIGLSRHGSSRSRREDEARS 60
           MER N GRRWANLKQRLGLKGMGCCGGSWSPTSSTLTM+EG+ LSRHGSSRS RED ARS
Sbjct: 1   MERQNGGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMIEGLSLSRHGSSRSHREDGARS 60

Query: 61  SAASGMNLAMALAAERNMRSGEVGPTGAGDVKSLVRLFEEMDGGDWKTRRKESKG-GDWM 120
           SA+SG+NLAMALAAERN+R+ E GPTGAGDVKSL+RLFEEMDGGDWKT+RKES+  GDWM
Sbjct: 61  SASSGVNLAMALAAERNLRTDEGGPTGAGDVKSLMRLFEEMDGGDWKTKRKESENTGDWM 120

Query: 121 CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF 169
           CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF
Sbjct: 121 CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF 169

[Close]

BLAST of Sed0027499 vs. ExPASy TrEMBL
Match: A0A5A7V0I3 (Zf-C3HC4_3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1465G00070 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 1.9e-79
Identity = 148/169 (87.57%), Postives = 156/169 (92.31%), Query Frame = 0


Query: 1   MERSNEGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMMEGIGLSRHGSSRSRREDEARS 60
           MER+N GRRWANLKQRLGLKGMGCC GSWSPTSSTLTM+EG  LS HGSSRS+RED  RS
Sbjct: 1   MERANRGRRWANLKQRLGLKGMGCCRGSWSPTSSTLTMIEGFSLSLHGSSRSQREDGGRS 60

Query: 61  SAASGMNLAMALAAERNMRSGEVGPTGAGDVKSLVRLFEEMDGGDWKTRRKESK-GGDWM 120
           SAASGMNLAMALAAERN+RS E GPTGA DVKSL+RLFEEMDGGDWKT+RKE +  GDWM
Sbjct: 61  SAASGMNLAMALAAERNLRSDEGGPTGASDVKSLMRLFEEMDGGDWKTKRKEGENNGDWM 120

Query: 121 CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF 169
           CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPIC+RSIIEILDIF
Sbjct: 121 CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF 169

[Close]

BLAST of Sed0027499 vs. ExPASy TrEMBL
Match: A0A0A0KEL6 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G421620 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 1.5e-76
Identity = 143/169 (84.62%), Postives = 153/169 (90.53%), Query Frame = 0


Query: 1   MERSNEGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMMEGIGLSRHGSSRSRREDEARS 60
           MER+N  RRW NL+QRLGLKGMGCC GSWSPTSSTLTM+EG  LS HGSSRS+ ED  RS
Sbjct: 1   MERANRRRRWTNLRQRLGLKGMGCCRGSWSPTSSTLTMIEGFSLSLHGSSRSQGEDGGRS 60

Query: 61  SAASGMNLAMALAAERNMRSGEVGPTGAGDVKSLVRLFEEMDGGDWKTRRKESK-GGDWM 120
           SAASGMNLAMALAAERN+R+ E GPTG  DVKSL+RLFEEMDGGDWKT+RKES+  GDWM
Sbjct: 61  SAASGMNLAMALAAERNLRNDEGGPTGGSDVKSLMRLFEEMDGGDWKTKRKESENNGDWM 120

Query: 121 CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF 169
           CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPIC+RSIIEILDIF
Sbjct: 121 CCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSRSIIEILDIF 169

[Close]

BLAST of Sed0027499 vs. ExPASy TrEMBL
Match: A0A6J1EWQ9 (uncharacterized protein LOC111437226 OS=Cucurbita moschata OX=3662 GN=LOC111437226 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 3.2e-71
Identity = 142/170 (83.53%), Postives = 154/170 (90.59%), Query Frame = 0


Query: 1   MERSNEGRRWANLKQRLGL-KGMGCCGGSWSPTSSTLTMMEGIGLSRHGSSRSRREDEAR 60
           MER N G+RWANLKQRLGL KG+GCCGGSWS TSSTLTM++GIGLSRHGSSRS R+D  R
Sbjct: 62  MERPNRGQRWANLKQRLGLMKGIGCCGGSWSSTSSTLTMIDGIGLSRHGSSRSHRDDGTR 121

Query: 61  SSAASGMNLAMALAAERNMRSGEVGPTGAGDVKSLVRLFEEMDGGDWKTRRKESK-GGDW 120
           SSAASGMNLAMALAAERN+ + E GPT  G+VKSLVRLFEE+DGGDWKTRRKES+  GDW
Sbjct: 122 SSAASGMNLAMALAAERNL-TEEGGPT-VGNVKSLVRLFEEIDGGDWKTRRKESENNGDW 181

Query: 121 MCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF 169
           +CCVCMERSKGAAFIPCGHTFCRVCSREL LN GTCPIC+RSIIEILDIF
Sbjct: 182 LCCVCMERSKGAAFIPCGHTFCRVCSRELRLNGGTCPICSRSIIEILDIF 229

[Close]

BLAST of Sed0027499 vs. TAIR 10
Match: AT4G03965.1 (RING/U-box superfamily protein )

HSP 1 Score: 133.7 bits (335), Expect = 1.4e-31
Identity = 84/178 (47.19%), Postives = 103/178 (57.87%), Query Frame = 0


Query: 8   RRWANLKQRLGLKGMGCCGGSWSPTSSTLTMMEGIGLSRHGSSRSR---REDEARSSAAS 67
           RR   LK+RLG K +GCCG +W      L +    G        +R     D        
Sbjct: 37  RRKRTLKERLGFKRIGCCGPTWG-----LRLTSNTGEDDDEPFENRLVSGSDHVTGPLNQ 96

Query: 68  GMNLAMALAAERNMRSGEVGPTGA-GDVK-SLVRLFEE----MDGGDWKTRRKESK---- 127
           GMNLA ALAAERN R+ E   +G+   +K SL+RL EE    +   + +T R  +     
Sbjct: 97  GMNLATALAAERNYRTEETEASGSLTPLKVSLMRLLEETAERVVVEENETERVTASASST 156

Query: 128 ----GGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF 169
                 D +CCVCM R KGAAFIPCGHTFCRVCSRE+WLNRG+CP+CNR IIEILDI+
Sbjct: 157 VRGVNNDSVCCVCMGRKKGAAFIPCGHTFCRVCSREVWLNRGSCPLCNRPIIEILDIY 209

[Close]

BLAST of Sed0027499 vs. TAIR 10
Match: AT4G22250.1 (RING/U-box superfamily protein )

HSP 1 Score: 128.6 bits (322), Expect = 4.6e-30
Identity = 83/178 (46.63%), Postives = 100/178 (56.18%), Query Frame = 0


Query: 8   RRWANLKQRLGLKGMGCCGGSWSPTSSTLTMMEGIGLSRHGSSRSRRED-----EARSSA 67
           RR   LK+RL  K +GCCG +W+   +  T +     SR       + +     E+   +
Sbjct: 38  RRKRTLKERLRFKCIGCCGPTWNLRLTNNTTLHS-PTSRDDEIEELQIETGLVLESDHGS 97

Query: 68  ASGMNLAMALAAERNMR--SGEVGPTGAGDVKSLVRLFEEMDGGDWKTRRKESK------ 127
            +GMNLA AL AER  R  S E          SL+RL EE          KE++      
Sbjct: 98  GTGMNLATALEAERYNRGESTEAEADMTPRRVSLMRLLEETAEKIVDDDGKETEILTASI 157

Query: 128 ----GGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF 169
               G D +CCVCM R KGAAFIPCGHTFCRVCSRELWLNRG+CP+CNR IIEILDIF
Sbjct: 158 GTLTGNDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRPIIEILDIF 214

[Close]

BLAST of Sed0027499 vs. TAIR 10
Match: AT1G62370.1 (RING/U-box superfamily protein )

HSP 1 Score: 117.5 bits (293), Expect = 1.1e-26
Identity = 72/175 (41.14%), Postives = 92/175 (52.57%), Query Frame = 0


Query: 9   RWANLKQRLGLKGMGCCGGSWSPTSSTLTMMEGIGLSRHGSSRSRREDEARS-------- 68
           +W  LKQRL    +GCCG    P +  L   E   +          +++           
Sbjct: 40  KWTTLKQRLRFDWVGCCG---KPLTLRLRQAETPIVVDDDDDEEESQNQVVDFSDPGTGT 99

Query: 69  -----SAASGMNLAMALAAER--NMRSGEVGPTGAGDVKSLVRLFEEMDGGDWKTRRKES 128
                +  S  NLA ALA ER  ++   E   T       L+RL  E DG D  T     
Sbjct: 100 ELDCLTRGSTRNLAEALAEERLAHVTEEETAVTKV----PLMRLLAESDGCDSTT---TW 159

Query: 129 KGGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDIF 169
            G D +CCVCM R KGAAFIPCGHT+CRVCSRE+W+NRGTCP+CNRSI ++LD++
Sbjct: 160 LGNDPLCCVCMGREKGAAFIPCGHTYCRVCSREIWMNRGTCPLCNRSIFDVLDLY 204

[Close]

BLAST of Sed0027499 vs. TAIR 10
Match: AT3G25030.1 (RING/U-box superfamily protein )

HSP 1 Score: 104.4 bits (259), Expect = 9.3e-23
Identity = 68/181 (37.57%), Postives = 92/181 (50.83%), Query Frame = 0


Query: 4   SNEGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMMEGIGLSRHG----SSRSRREDEAR 63
           S +   W +L+++L LK  G    S +   S  T +       H      S S    E  
Sbjct: 70  SRDKTAWKSLREKLRLKRNGSVWISSNSIPSLDTPIPNRDNVSHQLGFLLSNSGNVTEEA 129

Query: 64  SSAASGMNLAMALAAERNMRSGEVGPTGAGDVK----SLVRLFEEMDG--------GDWK 123
           SS    + L   LA ER + + E       +V+    SL+ L EE +G        G+ +
Sbjct: 130 SSVEGRIRLGAVLAEERALSAREEETPAEREVEPARMSLMELLEENEGQMSFVSVDGEAE 189

Query: 124 TRRKESKGGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDI 169
                    +  CCVCM RSKGAAFIPCGHTFCR+CSRELW+ RG CP+CN +I+E+LD+
Sbjct: 190 EEVAAVTAAEISCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTTILEVLDL 249

[Close]

BLAST of Sed0027499 vs. TAIR 10
Match: AT3G25030.2 (RING/U-box superfamily protein )

HSP 1 Score: 104.4 bits (259), Expect = 9.3e-23
Identity = 68/181 (37.57%), Postives = 92/181 (50.83%), Query Frame = 0


Query: 4   SNEGRRWANLKQRLGLKGMGCCGGSWSPTSSTLTMMEGIGLSRHG----SSRSRREDEAR 63
           S +   W +L+++L LK  G    S +   S  T +       H      S S    E  
Sbjct: 70  SRDKTAWKSLREKLRLKRNGSVWISSNSIPSLDTPIPNRDNVSHQLGFLLSNSGNVTEEA 129

Query: 64  SSAASGMNLAMALAAERNMRSGEVGPTGAGDVK----SLVRLFEEMDG--------GDWK 123
           SS    + L   LA ER + + E       +V+    SL+ L EE +G        G+ +
Sbjct: 130 SSVEGRIRLGAVLAEERALSAREEETPAEREVEPARMSLMELLEENEGQMSFVSVDGEAE 189

Query: 124 TRRKESKGGDWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICNRSIIEILDI 169
                    +  CCVCM RSKGAAFIPCGHTFCR+CSRELW+ RG CP+CN +I+E+LD+
Sbjct: 190 EEVAAVTAAEISCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTTILEVLDL 249

The following BLAST results are available for this feature:

BLAST of Sed0027499 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022953088.1	1.1e-81	89.35	RNA-binding protein MEX3B-like [Cucurbita moschata] >XP_022953089.1 RNA-binding ...	[more]
KAA0061653.1	3.8e-79	87.57	zf-C3HC4_3 domain-containing protein [Cucumis melo var. makuwa] >TYK05853.1 zf-C...	[more]
KGN47968.1	3.0e-76	84.62	hypothetical protein Csa_002927 [Cucumis sativus]	[more]
XP_023531397.1	1.2e-72	84.12	uncharacterized protein LOC111793648 [Cucurbita pepo subsp. pepo] >XP_023531398....	[more]
KAG6589274.1	1.2e-72	84.12	hypothetical protein SDJN03_17839, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Sed0027499 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B3H754	2.5e-04	31.37	E3 ubiquitin-protein ligase APD3 OS=Arabidopsis thaliana OX=3702 GN=APD3 PE=2 SV...	[more]

BLAST of Sed0027499 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HXI8	5.2e-82	89.35	RNA-binding protein MEX3B-like OS=Cucurbita maxima OX=3661 GN=LOC111468383 PE=4 ...	[more]
A0A6J1GME5	5.2e-82	89.35	RNA-binding protein MEX3B-like OS=Cucurbita moschata OX=3662 GN=LOC111455597 PE=...	[more]
A0A5A7V0I3	1.9e-79	87.57	Zf-C3HC4_3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A0A0KEL6	1.5e-76	84.62	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G421620 P...	[more]
A0A6J1EWQ9	3.2e-71	83.53	uncharacterized protein LOC111437226 OS=Cucurbita moschata OX=3662 GN=LOC1114372...	[more]

BLAST of Sed0027499 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G03965.1	1.4e-31	47.19	RING/U-box superfamily protein	[more]
AT4G22250.1	4.6e-30	46.63	RING/U-box superfamily protein	[more]
AT1G62370.1	1.1e-26	41.14	RING/U-box superfamily protein	[more]
AT3G25030.1	9.3e-23	37.57	RING/U-box superfamily protein	[more]
AT3G25030.2	9.3e-23	37.57	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 120..157 e-value: 4.9E-7 score: 39.4
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 120..158 score: 11.353297
None	No IPR available	PFAM	PF13920	zf-C3HC4_3	coord: 119..163 e-value: 1.2E-12 score: 47.4
None	No IPR available	PANTHER	PTHR46629	OS01G0917900 PROTEIN	coord: 1..168
None	No IPR available	PANTHER	PTHR46629:SF18	LIGASE, PUTATIVE-RELATED	coord: 1..168
None	No IPR available	CDD	cd16449	RING-HC	coord: 120..157 e-value: 1.8084E-8 score: 46.3065
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 108..165
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 100..168 e-value: 6.9E-14 score: 53.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0027499.1	Sed0027499.1	mRNA
Sed0027499.2	Sed0027499.2	mRNA