Sed0027451 (gene) Chayote v1

Overview
NameSed0027451
Typegene
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
LocationLG06: 31694189 .. 31697728 (-)
RNA-Seq ExpressionSed0027451
SyntenySed0027451
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAACCAGTTGTGGATATGCTTTCAAATGAAGGTCACATTCAGAGCCAAGGGTATACAAAAGTAGGAAGTTTGAAGTCTGTGGTGATGGTGGTACAGAGGGATCACCATATCCTCTCATGGAGAAAAGGGCAAGAAAAGGGCAAGAAAGCTGTGAAGTGTTAATGTTGTTGTCTTCAATTTACTTGAATTGTTGCAATGCTTTATCAATTTTCTTTAGTGTTTTGCATAGATATGTTGTTGAGTTATGCTATTTCACCTTGTTTTCCTTATGCATTGGTGTATAATGTGAATTTCAACAAATTGTATTTGTATTATAACTTATCTCTGACACTTTTTATATTTTTCCAGGTGGTTAAAAGGAAAGGAAAAGATCTTGAACATGCTTGCTTCAATAGTTGTTTTGTGGGAATCATTTGATTTGAAACAAAATGATAGACTTTTTAGCAAAAGGTAATTCTTAAACCCTTTCCCTCATATATTGTATCACTGTTGGTGAATCATTGAGAACCAAATTGAAAAAAATGACTTGATTAAATATGACTGTGATACAAAAGGGTTGAGATAAAATTGACTTGATTAAATATATTAGTCCAAAAGTTATTTCCTTTTCTAGAGTTGTGGTGTGATTTGAGGTTTTATGGAATTGGAATAGGTTTCTTCCTCTGGTCTAACCAAATTTCAAAAACAAAAACAAGCTTTTGGAAGCTACTTTTTTTTGTTTCTAAATTTTAGTTTTGTTTATTAAAATATAGGTAAGATGTATATATCCAAATAAAAAAAAAGGTAGAGTAAGGTAGTTGTTGTAGGCTTAAGTTTCATAAATAAAAAATGAAAAACAAAATAGTTACCAAACGGGGCCTTATCTATGTGTTTAGCTTTTGGAGTTGGTGGCTGATTGATTTTGCTTTGTTATCTTAGCTTATGGTAAACAGTTATTTTGCTAACATCTTGTGTTATCTTTGGCTTTTGTTCTTATCCATTTAATATCTATTTTTAGGGAAAGACAATTAGTTAGTTACATATTTATTGAATTGAATATGTACCAAACTTTATCTTATTTTTATGTCTCCATAATCAGAGATTTTGTTTCCTTTAGAGGTAAATTGAAGGGTTAGATTGACATTGGAGATAAATATAATTGAACTAACTATTTTGGTTTCTTAATAAATATAAGAACCTATTCTCATCTCCATAATCTATAGCTGTTAAAATTCTTAAAAATGCTTAATAAGGTAAAACTATTTATTTCTTGAACTATTGATAAAAATAAAAAAAATAAACAAATTTGGTTAGTACTTGTTTAATCTCTCAGTCACATACAAAAAAGAGCATAATAAGGATTCACATTTTATAGCTTATATTTTGAACTCTTTGCAGCTTTCAATTTATCAAAAATTGTTTAATGAGTCTCTAAACTATCTATTTTGTGTATTATGTCTTAGTACTCTTAATTATGTATCTAATGTAGACCATTAATATGAATCTATTGAATACATGCCCATTTTTTGTTAATTTTTTTGGTTGGTCAATTTTAAATGGTAAGACTCGTATTTCCTACGGTTAAACTTGAACCTACTTTTATTTTATACATTGTTCCTTTTGTCTCTCTTTCTTTTGCCATTGTTCTTATAGAATGACGAATGTTTCAAGATGGCTCAAATTTTCTACACATTGTATGACTTAAATTTTTACAAGAACTTGTAACTTGTAAGTTATTCTCTCATGTTTTATACCCTACACTAAATTTTTATTAAGATAACAAAGTAAATTAAAATACTATGATTTTGACCTACATTTTATGTTCACCAATTTTCACTTCATAATTTGATAGTTCTATTGAGCAAGATGATCATAAACCAGATAAAAATTCAAAGCAACAAGGTAAGTTTTTTTTTTTTGGTTAGTTTTGTGGCTTTGAATTGAAAAATAATATTGTTTTGAATGTTATTTTTTATATATTATAGTATTGTGACTAGATCTGATCTGTGTAGAGCTTCCTTACATATATTGAGGTTTAATTGATCTTTTTTCTTATAGGTAAAATATCATCTAGTGAAAGGTAAACCAAAATCTAGCAAGGAAGTATCGTTCTTGCCAAGGCTCCGATTCTTGAAGTAAGTTTCATTTTGTAGTTCAACTTTGGTTAATAGTAATATTAAGTATGTACATAGTTCAAATTTTAGAGGCATCATGTTTTCATTCGTTGCTTTTTGGGTCCGTTTTTCTTGATTTATATTTCATCACCAACTCTGCATTCATTTCTAAGGTTCATCATCCAACCATATATCTTGGGTGGAATATCCTTTGGAAGCCATGAGTTTTTTCTTAAAGAGATGTTCATGGCTCGACTCATTGGTCTTATATATTATGTAATAGAAAATTGGGTGCCGAAATGCTAAGTAAGATTCATTCCCTTCAATCCTATGAAATCTCTTTCTCTCTCTTCAAAACAGTGGAATATATTCAATTGGTTAAAATACTAAATTGATCCCTGAACTTTCAACTTTGTTCCATTTAAGTCCCTGAAGTTTCAAAAGTTCTAATTTAGTCCTCCAAGTATGAATTAAGCTTAGAAATGGTCCCTACCGTTAATGTGGAGTTAAGTGATCATTAAAATCAAATAAAATAATAATATATATATATTTTATTCTTCCATCCATCTCTTCCCCTCTCCTCCATTTTTTCTCCCTTTCTCGTCGGATTTACTCGAGAAGCCCCTCTTTCTTTCACTGAGTTATCAAACCTAGACTAATTCATAACACCCAACGAGTTCCCAATCTAAATTTTGAGCTCCACTAGAAGAATTAACAAACCCCTTTGTTGCTAAAATTGATTCCATAAGTTCTTGTTTCATCGCCCTATCTCCAAATCCAGAATCAAAGTTTCATTACATGACGCCATAAATCTCGACAAGATAAGACAACCTCAAGACTCAAAGATCGAATGAACCGATAATCCTCTCGGCCAACACTAACACTATCACTGTCGCCGCCGCCATTGTTGCTCAAATGAAGACCTTCAGTTCCATCAACAACAAGACTCGAAAATAGTGTGGTCGGAGTAGAGGAATAATGCGAAAGACCACCAAAATTATAGTGTTCTTGATGAGACTGCTGATTGCTCATCGAATCGAAATTGATGAAATCAGAAATCCATTATCACATCTTCTTTTTCACGCACTTTCCATACCTCACTTTCTTTATCCAAGCATTTCATTCTCACCTACAACACTTTGCTATGTTTTCATATTGCCCCAAATCACTCTCCCTTTCCATTTTCTCACCAATTCACTCCATTTTCCTTGAAATTGTTAAGTTTTCTCATCGAATCATGGTGATTTCTCCCATTTCCCCATCCAATCGAATTTTTAAAACCCTTAATCTTTTATGTTTTACCCTTCGTTGCAAAAGAATCGGAGATGACGATGACGCCGTCGAGGAACGTTCTGTTTCAAAAGTACAAAATGAGACATTTATTGAGGAAATGAAACTTTGTCAAGGCTTGATGACTCACGAAGTATCGCCATTAAAGTGGTGA

mRNA sequence

ATGAAACCAGTTGTGGATATGCTTTCAAATGAAGGTCACATTCAGAGCCAAGGGTATACAAAAGTAGGAAGTTTGAAGTCTGTGGTGATGGTGGTACAGAGGGATCACCATATCCTCTCATGGAGAAAAGGGCAAGAAAAGGGCAAGAAAGCTGTGAAGTGGTTAAAAGGAAAGGAAAAGATCTTGAACATGCTTGCTTCAATAGTTGTTTTGTGGGAATCATTTGATTTGAAACAAAATGATAGACTTTTTAGCAAAAGTTCTATTGAGCAAGATGATCATAAACCAGATAAAAATTCAAAGCAACAAGGTAAAATATCATCTAGTGAAAGAATCGGAGATGACGATGACGCCGTCGAGGAACGTTCTGTTTCAAAAGTACAAAATGAGACATTTATTGAGGAAATGAAACTTTGTCAAGGCTTGATGACTCACGAAGTATCGCCATTAAAGTGGTGA

Coding sequence (CDS)

ATGAAACCAGTTGTGGATATGCTTTCAAATGAAGGTCACATTCAGAGCCAAGGGTATACAAAAGTAGGAAGTTTGAAGTCTGTGGTGATGGTGGTACAGAGGGATCACCATATCCTCTCATGGAGAAAAGGGCAAGAAAAGGGCAAGAAAGCTGTGAAGTGGTTAAAAGGAAAGGAAAAGATCTTGAACATGCTTGCTTCAATAGTTGTTTTGTGGGAATCATTTGATTTGAAACAAAATGATAGACTTTTTAGCAAAAGTTCTATTGAGCAAGATGATCATAAACCAGATAAAAATTCAAAGCAACAAGGTAAAATATCATCTAGTGAAAGAATCGGAGATGACGATGACGCCGTCGAGGAACGTTCTGTTTCAAAAGTACAAAATGAGACATTTATTGAGGAAATGAAACTTTGTCAAGGCTTGATGACTCACGAAGTATCGCCATTAAAGTGGTGA

Protein sequence

MKPVVDMLSNEGHIQSQGYTKVGSLKSVVMVVQRDHHILSWRKGQEKGKKAVKWLKGKEKILNMLASIVVLWESFDLKQNDRLFSKSSIEQDDHKPDKNSKQQGKISSSERIGDDDDAVEERSVSKVQNETFIEEMKLCQGLMTHEVSPLKW
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..125
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..101
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 108..125

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0027451.1Sed0027451.1mRNA