Sed0027417 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCAAAATTCAACATCAACAATATCAGACAACATCTCCATTAATACTTAAGCATAAATAATCGATAGACACCATACTTCAATAAGAAAGTGAGATTACAAATACCAATTCCGAAGTTCGATCCTGTCAACCAGATAACCAATCACGTGACCGATTAAGTAAAAAAAATTAGCAATCGGGGGAACCGGGTTCTTTTTTGGATTCCCAAATAAACGTGGCCCATACTCATAGATCCCCAACCAACATTGACTCTGGGAATTCGAAGTTTGGTCGTCTTTCTCTCTAATCGGATTCTTCAGCTCTCAAATCTTCGCTTTCCCTTTGATTCGCCGCTTTGTCAGCCATGAACGCCTTCACAGTTTTCTTCCTAGCCCTAATTCTTTTCGCCTCTCCATTTCTCCCAGGTTCGCCCTTTTTTTCCAATCTCAGATCTACTTTTTTGGTCATCATTTCGGAATTCCGGACTCTTGTTTTGAAATTGCCCTGTTTGATTAGATTTTGCATCTTGTTGCGCATGCATGGTTTTCGATCGAGATTTTTCTGTTCTAATGGGTTCTGGGTGTTTGACTATTTTGGGGTTTGATTGTTGGGAGTTTAGATTTTTCATTTTGTATTGAATCGTGTCTTTCCCATTTGTATTTTGTTTTTCTTTGACTGATTTTGATGGTGAAGTGAGTTTAATTGATTAATTGATCATTCATTGAAGAAGTTTATTTTGGGGACTTCATTGTCAAATTGTTTGTCTATTGTCAATAATTGATTGTAGATTTCTAACCTCAATTCCTCGTCCTCTTTTGTGAATTAGCCAAATTTTTGTTTCATTGAATCTACTAGTAGAATGGTGAGGTGCAGCTAAAGGGGGAGGGATAAAAAATATGCAGTCACTTTTCTCGTTTGGAACATGCATGAAGTCTAGCTAGAGAATCGAAGAATGTGTTTTTGTTGTCTTTCGTTGAATGCATGTAATTTCATTGTTCTAGCTGCTTTTTTTACCTTGTTGTTTATTTGATTGATAGTTGCCACTTGTCAATCGAACTCCGATGGTGAAACGTCTGAGATTGTTGAAGAAGCTAGTGATCTTGGAATTGTGGGTGAAGAAGATTCTCAGGATTTTGGAGAAGTGAACTTCGGTACAGCTCCAGGAGTCGATACTGTCTGCATTTTCCCGAAAAATAGTGCACGCAGTAAGTGTTAAGCTAGATTCATTGGTAAATCATAAATGTTTGTTTTCTTTGATAGGCGTGGCATGCTTTTGTGGTATCGATTAATTGACATCGGATTCATGTCTTTTATTGCAGTAGTGCAAGCTGGAGAAGAGACCGAACTACTTGCAGGGGTGAAAAATGAGGGTAACTAACTCTAATCTGCTTAACCTTTTGGCCTTGTACATCCAAAAGATAATCACAGGCATCTTTGAACTTGAAAGTTGCCTCTTCTAGTTGATCTTGTCGCAGTTTCGATTAATCTGGAATTCTTTTATTGGCTGGGTTTTCATCTGAAATTACACTCCTCAGCATTACATTGGCTTCTTTGATTTTTTTTATAGGAAACAAAATCTTCATTGATGAATGAAAAGATTACAAATCCTATCAAAACGTTACAAAAAATTATGCCATTGAGATATCAAGGTAGATAAATCATAGTTAGAAAAGGGAGGGGATTTATGACACCTATACAACACCAAAAAACGGCAGAATCGACAAGTGTGCTAAAATCCTTTGGGGAATATTCCATCTCGAACAGTCTGCTATTACGTTCCGTCCAACAAGACCAAAGATAGGCAAAAATGAAGTTGGTCCATAGGATCTCTCTCTCTTTCTTGAATGGTGGCCCATTAGCACATAACGGAGGAGATCTGGGGCAGATTTAGGAATAAGTGTGGCCCATTGGCTTCTTTGATTTAATTTTGTTAAACGTGGCATTGAAAGGCTAGTGTTTATTATCGCTTTCCATTGATCCAAAACCTTGTATGTCAATAATTTCCTTTATTGCTATTTGTTAATCCAGGTGAATCAAGCTTGAATATTATAGCTATTAAGGCCAGCATTCATTACACTTTTGATCATCGCATGTTGATTCAAAATCTTACTGGACAGGTAATCCCAGCCTGACTTATGGTTATTAAATAGAGTTGCTGTGTCATGTGATCTCAAATTGTCTTTTTTTTCCTTTTTCTTTGTCTCTAATACATTTAATGAATACAAGCATAATTTCCTTGATTTGAAAGATACGAGTTTTGGCAATTAGTTGTGGAGAACCTGGTAACTTCCTTGAAGAAGACATTCTATGCCACCTAGAATTCCTATAGTTTTGCCCTTCAGAGTTTGGGCACCATTAATTTAGTTGTACGCAATGAATATGGTTTTTCTTGTAATATATGTTTATATATTTTTCTCATTTTTTTCTTCTTTTTTCTTATTTCTGAAATCGTGGCTCATGTTTTCCTTTTCTTTTTAAGACAGTTTTTTGTCAGTTCATATTACTAGAATTGTCAGTTTCTAGAGAAAGATGTTCCTATTATTCTTTCTGCAATATGTTTTGTATCTCAATGTCGATTGTTATCTTTTTTATCCGAAGTGTCAACATTAATGATTGAAATTAATCTGTAGTTTTCCTGTTAGAAATTATCTTTAGGGAATTTATTGCTGCATATATATCATTCTGCTATTTTGAGTAACTATTCTTATTGTAAAGATAATATGACATAACTTGCATCTAAAGTTTAACATCCTCTCTATTTTTTAAAAGGTTTTTTGTGTAAAAGCTTATTTTAGTTTGGTTGCAGTAACTTCAGCTCCCTACTTTTAGCTTATATCATCTTCCTCGTTATGCTTGTAGGTTTTCCACAACGCAACGGTGCCACCATCAACCCAAGCATCTTATCCGTATGCATTTGCTGTCAGCAAGTTCTTGCAGGTTTATTCATAGTCATTATTATTGCAGTTTCTCGTCCTTTACTGTATGAATTTTCAGTTTACAGACTTACTAACCGGCATATCTTTTATCAATTTTGAAATTCTATTAATTGATGGAATGAAAACGCCATAATACATTCCTGATTTGCAGCCCGGAAACTTTGATCTAGTGGGCACCATCTATTATGAAATCGACCAGAATGCATACCAAAGCATCTTCTATAACGGTACTATTGAAGTTGTTGAACCTAGTGGTTTCCTTAGCATTGAGACTGTGTTTTTAGTCACTCTTGGTATTGCCCTTCTCGTTATTCTTGGCTTATGGATTCGTGGTCAAATACAGCAAAAACTCTCCAAGGTAAAGATCTTTCTGGACTTCATTTGATGATGCCAATGTATTCTAATTGTGGATGTTGCCTTATTTATATTCTTATTAGTTTGCGACTTAAAATAACCTAATTTTGGAAAACTAAGAGGTGAAGGGTTCAATTCATAGTGACCACCTACCTACCTAGGAATTAAGTTCCTACGCGTTTCCTTGATATTCAAATGTTGTAGGGTTAAATGGTATGTATCATGACAGGAGTCGAGATGTACACAAGCTGGCATAGTCAGTTATGGATATAAAAAAAATGAAAAGAAGTTTGCGACTTAAAATATATCTGAGGTCTTTTACAAGTATATACCGTCTGCCTTTTCTTTTATTAGTAACCGTGGTCTGTTCCTTCTTACGGAATTTTATGAGACTTCGATGTATGAACTATGAAGTATGAGAAGTGGAGCTGCAAGATGTGCATCTTTTCTAATTTAATTTTTTTTCTAGATGTATGTAAACGTTTTGACATCAAATACTGTGCAATTCCTTGTCTGTTTCAGAAACCCAAGAGGGCTGCTTCCAAGGTTGAAGTGGGAACAAAAACAGTTGATACCTCAATGGATGAATGGCTTCAGGTTTGTAATTGTTTCTGGAATTCATGTCTGGTGAAAATATCAGAAACTGCTGCTGATATATTTTGTAATCTTATCCTTAGGGCACTGCATACACTCGGTCCGGATCAAGCAAGTCGAAGAAGAAGATCTAGTTCAATCTCGTCTCCATCCCAGTTGCACAGCACACTGACAATGAGCGGATTCCTGCAACTCGCATTCGAGGTTGACTAGTTTTGTAAGTTAGGTTTGTTAAACAACCTTTCCCTGCAAGTGTGGCATGTGAAGGAATTGTTTCTTAATGCCAATCTAAATTAAGTCGGCTATAGAACAGTTTTCTGGGTCTAGAGAATTTTCCTTGGGGCATATGATTATCAAAGTTGAAACTTTTTAAACTTTCCTTGGAACCCTTTTTCTGTATTAATCACAATCTCTGCTTTGTTGAATCACCAATGTCGTTCTCTTTGACTTATTTTGCCTCTACTGCTTCTTTACTATAAGGTTTCGTGTTTGGATTTCATTTTTTTTTAATAGTTTCTTAACGAAG CCAAAATTCAACATCAACAATATCAGACAACATCTCCATTAATACTTAAGCATAAATAATCGATAGACACCATACTTCAATAAGAAAGTGAGATTACAAATACCAATTCCGAAGTTCGATCCTGTCAACCAGATAACCAATCACGTGACCGATTAAGTAAAAAAAATTAGCAATCGGGGGAACCGGGTTCTTTTTTGGATTCCCAAATAAACGTGGCCCATACTCATAGATCCCCAACCAACATTGACTCTGGGAATTCGAAGTTTGGTCGTCTTTCTCTCTAATCGGATTCTTCAGCTCTCAAATCTTCGCTTTCCCTTTGATTCGCCGCTTTGTCAGCCATGAACGCCTTCACAGTTTTCTTCCTAGCCCTAATTCTTTTCGCCTCTCCATTTCTCCCAGTTGCCACTTGTCAATCGAACTCCGATGGTGAAACGTCTGAGATTGTTGAAGAAGCTAGTGATCTTGGAATTGTGGGTGAAGAAGATTCTCAGGATTTTGGAGAAGTGAACTTCGGTACAGCTCCAGGAGTCGATACTGTCTGCATTTTCCCGAAAAATAGTGCACGCATAGTGCAAGCTGGAGAAGAGACCGAACTACTTGCAGGGGTGAAAAATGAGGGTGAATCAAGCTTGAATATTATAGCTATTAAGGCCAGCATTCATTACACTTTTGATCATCGCATGTTGATTCAAAATCTTACTGGACAGGTTTTCCACAACGCAACGGTGCCACCATCAACCCAAGCATCTTATCCGTATGCATTTGCTGTCAGCAAGTTCTTGCAGCCCGGAAACTTTGATCTAGTGGGCACCATCTATTATGAAATCGACCAGAATGCATACCAAAGCATCTTCTATAACGGTACTATTGAAGTTGTTGAACCTAGTGGTTTCCTTAGCATTGAGACTGTGTTTTTAGTCACTCTTGGTATTGCCCTTCTCGTTATTCTTGGCTTATGGATTCGTGGTCAAATACAGCAAAAACTCTCCAAGAAACCCAAGAGGGCTGCTTCCAAGGTTGAAGTGGGAACAAAAACAGTTGATACCTCAATGGATGAATGGCTTCAGGGCACTGCATACACTCGGTCCGGATCAAGCAAGTCGAAGAAGAAGATCTAGTTCAATCTCGTCTCCATCCCAGTTGCACAGCACACTGACAATGAGCGGATTCCTGCAACTCGCATTCGAGGTTGACTAGTTTTGTAAGTTAGGTTTGTTAAACAACCTTTCCCTGCAAGTGTGGCATGTGAAGGAATTGTTTCTTAATGCCAATCTAAATTAAGTCGGCTATAGAACAGTTTTCTGGGTCTAGAGAATTTTCCTTGGGGCATATGATTATCAAAGTTGAAACTTTTTAAACTTTCCTTGGAACCCTTTTTCTGTATTAATCACAATCTCTGCTTTGTTGAATCACCAATGTCGTTCTCTTTGACTTATTTTGCCTCTACTGCTTCTTTACTATAAGGTTTCGTGTTTGGATTTCATTTTTTTTTAATAGTTTCTTAACGAAG ATGAACGCCTTCACAGTTTTCTTCCTAGCCCTAATTCTTTTCGCCTCTCCATTTCTCCCAGTTGCCACTTGTCAATCGAACTCCGATGGTGAAACGTCTGAGATTGTTGAAGAAGCTAGTGATCTTGGAATTGTGGGTGAAGAAGATTCTCAGGATTTTGGAGAAGTGAACTTCGGTACAGCTCCAGGAGTCGATACTGTCTGCATTTTCCCGAAAAATAGTGCACGCATAGTGCAAGCTGGAGAAGAGACCGAACTACTTGCAGGGGTGAAAAATGAGGGTGAATCAAGCTTGAATATTATAGCTATTAAGGCCAGCATTCATTACACTTTTGATCATCGCATGTTGATTCAAAATCTTACTGGACAGGTTTTCCACAACGCAACGGTGCCACCATCAACCCAAGCATCTTATCCGTATGCATTTGCTGTCAGCAAGTTCTTGCAGCCCGGAAACTTTGATCTAGTGGGCACCATCTATTATGAAATCGACCAGAATGCATACCAAAGCATCTTCTATAACGGTACTATTGAAGTTGTTGAACCTAGTGGTTTCCTTAGCATTGAGACTGTGTTTTTAGTCACTCTTGGTATTGCCCTTCTCGTTATTCTTGGCTTATGGATTCGTGGTCAAATACAGCAAAAACTCTCCAAGAAACCCAAGAGGGCTGCTTCCAAGGTTGAAGTGGGAACAAAAACAGTTGATACCTCAATGGATGAATGGCTTCAGGGCACTGCATACACTCGGTCCGGATCAAGCAAGTCGAAGAAGAAGATCTAG MNAFTVFFLALILFASPFLPVATCQSNSDGETSEIVEEASDLGIVGEEDSQDFGEVNFGTAPGVDTVCIFPKNSARIVQAGEETELLAGVKNEGESSLNIIAIKASIHYTFDHRMLIQNLTGQVFHNATVPPSTQASYPYAFAVSKFLQPGNFDLVGTIYYEIDQNAYQSIFYNGTIEVVEPSGFLSIETVFLVTLGIALLVILGLWIRGQIQQKLSKKPKRAASKVEVGTKTVDTSMDEWLQGTAYTRSGSSKSKKKI Homology
BLAST of Sed0027417 vs. NCBI nr
Match: XP_023529772.1 (translocon-associated protein subunit alpha-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 449.5 bits (1155), Expect = 1.9e-122 Identity = 226/258 (87.60%), Postives = 247/258 (95.74%), Query Frame = 0
BLAST of Sed0027417 vs. NCBI nr
Match: XP_038886848.1 (translocon-associated protein subunit alpha-like [Benincasa hispida]) HSP 1 Score: 448.4 bits (1152), Expect = 4.3e-122 Identity = 230/258 (89.15%), Postives = 242/258 (93.80%), Query Frame = 0
BLAST of Sed0027417 vs. NCBI nr
Match: XP_022989061.1 (translocon-associated protein subunit alpha-like [Cucurbita maxima]) HSP 1 Score: 446.0 bits (1146), Expect = 2.1e-121 Identity = 226/258 (87.60%), Postives = 245/258 (94.96%), Query Frame = 0
BLAST of Sed0027417 vs. NCBI nr
Match: KAG6572098.1 (Translocon-associated protein subunit alpha, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011750.1 Translocon-associated protein subunit alpha [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 444.1 bits (1141), Expect = 8.2e-121 Identity = 226/258 (87.60%), Postives = 242/258 (93.80%), Query Frame = 0
BLAST of Sed0027417 vs. NCBI nr
Match: XP_023553718.1 (translocon-associated protein subunit alpha-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 442.2 bits (1136), Expect = 3.1e-120 Identity = 226/258 (87.60%), Postives = 241/258 (93.41%), Query Frame = 0
BLAST of Sed0027417 vs. ExPASy Swiss-Prot
Match: P45434 (Translocon-associated protein subunit alpha OS=Arabidopsis thaliana OX=3702 GN=At2g21160 PE=2 SV=3) HSP 1 Score: 265.4 bits (677), Expect = 6.8e-70 Identity = 138/256 (53.91%), Postives = 193/256 (75.39%), Query Frame = 0
BLAST of Sed0027417 vs. ExPASy Swiss-Prot
Match: Q54R45 (Translocon-associated protein subunit alpha OS=Dictyostelium discoideum OX=44689 GN=ssr1 PE=3 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 3.7e-15 Identity = 59/193 (30.57%), Postives = 95/193 (49.22%), Query Frame = 0
BLAST of Sed0027417 vs. ExPASy Swiss-Prot
Match: P43307 (Translocon-associated protein subunit alpha OS=Homo sapiens OX=9606 GN=SSR1 PE=1 SV=3) HSP 1 Score: 80.9 bits (198), Expect = 2.4e-14 Identity = 63/217 (29.03%), Postives = 104/217 (47.93%), Query Frame = 0
BLAST of Sed0027417 vs. ExPASy Swiss-Prot
Match: Q7TPJ0 (Translocon-associated protein subunit alpha OS=Rattus norvegicus OX=10116 GN=Ssr1 PE=1 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 3.1e-14 Identity = 74/251 (29.48%), Postives = 114/251 (45.42%), Query Frame = 0
BLAST of Sed0027417 vs. ExPASy Swiss-Prot
Match: Q5R4X4 (Translocon-associated protein subunit alpha OS=Pongo abelii OX=9601 GN=SSR1 PE=2 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 4.1e-14 Identity = 76/250 (30.40%), Postives = 114/250 (45.60%), Query Frame = 0
BLAST of Sed0027417 vs. ExPASy TrEMBL
Match: A0A6J1JIZ3 (Signal sequence receptor subunit alpha OS=Cucurbita maxima OX=3661 GN=LOC111486246 PE=3 SV=1) HSP 1 Score: 446.0 bits (1146), Expect = 1.0e-121 Identity = 226/258 (87.60%), Postives = 245/258 (94.96%), Query Frame = 0
BLAST of Sed0027417 vs. ExPASy TrEMBL
Match: A0A6J1GKP1 (Signal sequence receptor subunit alpha OS=Cucurbita moschata OX=3662 GN=LOC111455149 PE=3 SV=1) HSP 1 Score: 442.2 bits (1136), Expect = 1.5e-120 Identity = 225/258 (87.21%), Postives = 242/258 (93.80%), Query Frame = 0
BLAST of Sed0027417 vs. ExPASy TrEMBL
Match: A0A6J1I2T7 (Signal sequence receptor subunit alpha OS=Cucurbita maxima OX=3661 GN=LOC111468485 PE=3 SV=1) HSP 1 Score: 440.7 bits (1132), Expect = 4.4e-120 Identity = 226/258 (87.60%), Postives = 241/258 (93.41%), Query Frame = 0
BLAST of Sed0027417 vs. ExPASy TrEMBL
Match: A0A5D3CLZ0 (Signal sequence receptor subunit alpha OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00850 PE=3 SV=1) HSP 1 Score: 438.7 bits (1127), Expect = 1.7e-119 Identity = 223/258 (86.43%), Postives = 240/258 (93.02%), Query Frame = 0
BLAST of Sed0027417 vs. ExPASy TrEMBL
Match: A0A1S3BIP9 (Signal sequence receptor subunit alpha OS=Cucumis melo OX=3656 GN=LOC103490305 PE=3 SV=1) HSP 1 Score: 437.6 bits (1124), Expect = 3.7e-119 Identity = 222/258 (86.05%), Postives = 240/258 (93.02%), Query Frame = 0
BLAST of Sed0027417 vs. TAIR 10
Match: AT2G21160.1 (Translocon-associated protein (TRAP), alpha subunit ) HSP 1 Score: 265.4 bits (677), Expect = 4.8e-71 Identity = 138/256 (53.91%), Postives = 193/256 (75.39%), Query Frame = 0
BLAST of Sed0027417 vs. TAIR 10
Match: AT2G16595.1 (Translocon-associated protein (TRAP), alpha subunit ) HSP 1 Score: 240.7 bits (613), Expect = 1.3e-63 Identity = 137/256 (53.52%), Postives = 182/256 (71.09%), Query Frame = 0
BLAST of Sed0027417 vs. TAIR 10
Match: AT2G21160.2 (Translocon-associated protein (TRAP), alpha subunit ) HSP 1 Score: 196.8 bits (499), Expect = 2.1e-50 Identity = 99/184 (53.80%), Postives = 138/184 (75.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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