Sed0027379 (gene) Chayote v1

Overview


Name	Sed0027379
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Violaxanthin de-epoxidase-related protein
Location	LG05: 45808663 .. 45811893 (+)
RNA-Seq Expression	Sed0027379
Synteny	Sed0027379

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCAAATCTTATCATTACTGAGAAAAAAGTGAACAAAAATCAAAGAATAAAATGAGCGCCATGTCTATGGAAGCTCAGTTGTTTGTGAATTCCGTAACTAGAATTGGAAGTGGATGGCCTCTGAATCCTCATTTCCTGAGTAATCGGAAAGCCGTTCATTCCGCTACTCTATCGATGCCCAGCCGCCGGCGAACTGTTTCTCGTCGGCGGCTCACCGTGAGTGCGGCGGCGGACAAGATTACGGCGCCGGTGGAAACTCCGGTGAGTATTGTGGCGATTGTTGGTGAAGGAAGCATTAGCCCCTTGAAATCCACTCCATGGGAAGAAGTTATGCTTCATACTGTGAGTACTAATCATTTTAATTCACTCGTTCTTGTTTCCTTATTGCAATTTCCCAATATTTTTGTTTTGAATTCTCGGTTGGATCGTTTTCTTCTGGCTGGTATGTTCATGTGTGCAAAACATTTCATTGTCCATAATCAATGATAAAGATAATTGTTACTAGAAAATACCCAACAGAGGCATTAAAGTGAAATCACAATGCATGTATGGGAGGGACTTTTTAAGGTGCAAAATCAACTTTGTCATTTCCAAAAATCACTAATAAGGGTATGACAAAGTCACAAAAGTATAAATCATTAAGTGGTTAGAATTGTGAGTTCATTCTACACTGGCTACCTACCTAAAAATTAATTTTTTGAGTTTCATTTACTAACCTAATATAATTGGGTCAGGTGATTGTCTCATAAGAATAATTGGGTCCATTGAAGATCTCAAGAAAGTTAGCTCAAATAGCCTGATAGAAGCATAGCTTAGCATTCGAAGTATTACTTCCTTTCACGAGGTCAGAGGTTTGAATCTCCATCCTGCATTTTTTGTATTAAAAAAAGATTTTTACAAGTTCTTTTGATTACCACAGAAACCATTGAAGGCCTAAAGTAAGTGAAATCCATAGTATCTTTTAATCCTCCACAAAGCTACCGACCTATGAAGAAATTTAGTTCTTAAAGACTTTAACCTTTTAGAGTTTGACAAAGAAAGAGGAAGACAATGAGGGACAAGAAGGATTAGCAATAAAGAAGATAATATTTTAGTTTACTACACTAAATATTCATGATTAAGCATGAATATTCATGTATTGATAAACTACTCTGTTGTAAACCTTTTATTTTCCACGGCATAATAAAATAATGAATGAGAAGTTATTTTAGTCAAATGTACTTCCAAAATATTTTAGAAGATTGCTACCCTTTCTTCACCAAGGCACCATTTTTTTAAACCGGAAAATCGGAGCTTTGCTCCACTATACCCGGGATAACCACGTCCGTCCCTAGACTAGGCACTAGAAGATATCGAAGGAATGGAGACACGGGTGGTGTCTACAAATTGATGTCACAGGTGAGTCTCGAATCTAGGACTTTGAGGGGAGCATACTTTCAAAGTCCAAGTTTTCAATCACTGTGCCCTTGAGGACCCCTCGGCACCAATTAGACACAAGAGATGCTCCTACTCTTAATTTATTGTTGTGCTTTTACAGTGCCCATCTCCTTAAATGCTAGTGGAGCTAATGTGCATCTTAAATTCTTATTTAGATTAGCTTCATTTTGTTAAGAAAAAGGAAGAAGACATTCAAGTAGAGATAAGCCAGAAAAAAACACTCTTTATTTAGCAACCTCATCAACTTTGCCTTCATAATGGCTTTTACCTGTTTCTATGTTGCTCTCTATTAACAGGCAAAAAGGCTAAAATGGATCGAAGAAGACTACAAAATGCACGTCTTTGTTGATAGTTTCTGTAATGCAACTCATCAATATTCCGAAAACATTCAAATCATATGCAATGCAGATATTTTGGTTGTTGTTGCTGTCACGAGTAAAGATTCAGTCGTATGGATACAAACAAACTGCAAAAACATCCGAAATATAATCTGCTTTGACTCTGCAACAGATTTAGTTAACAAGTTAGGGGGGTTGTCCTTTCCCAGTGAAACCAAAGGAAATGTGCTGGGGAACATTTTTGGAAATTCTCAGCTGTTGGAGAAAAGAAAGAAATCTGAGGAGGTAGTACAGACCGTATTTGAGGCATGGGATCGTAGTAATTCGGATGATATAAGGTTTTGTTTGTTGGTCATAATCAATGCATATATAAAGCCTGTTCCTATATTGAAGAATCTAAGATCAAAAGGATTTTCAACTTTGAACTGCATGGTTAAAAATTGTGGAAGGCAAATATTGAATTGCTTGATGGATCCTAATTGTAGGAAAGCTCTTCAATGCTTGAATCAGTGCAGCCCTGTGGATCAAGTGTGCAACTACAGGTGCATTGCTTCCTATGAAAGTCCAAATCTTGAAGCATTTTCATTATGTGTGCTGCAGAAGAACAACTGTCTCGAGTTGGACGCAAAAGTTCCTGAAAAGCCCTCCGTGTCTCCAATGGAGAAATTTCGAGGTAAGGACATGTGCCACGAAACAGCAGAAGATCTTTTTGTTGGTTGGTTGGGGAAATTGGAGTGGAGTTGGCGAGTGGTAGCCGGGCAAAACCCTGCTTATGATCAATTTCCATGCCAATACCAATTGTTTTACAGGGGAAAAGCGCGAGGATCGTTTTGGTACGAGCCTGTTTTCATGGTGAAAACATTGGAAGGGAAGCTGGTATGGAGGCGGCGAAGATATCGAGTAAAGAGGGGGGAAACTGCAGGGACATTCTTGTTCAGTGTACTGGACAATGGTGTTGTTTCAAATGAGTTTTGGAGCATTGTGGATGTATGTGACGATCTGTCTTGGGGTTTGTTTCACTATAACGGTGCTGCTCGAGCTGCGGGACAGTCGTATACAGGTGCTGTTCTTGTGAGTCCAGATGGTGCTTACCCTGAGAATCCTCATCAAAAAGAGAGAATTGGTGCTGCTTTGGAGAAATGTGGAATTAAAGAGTGGGAACTCTTTGCTGTTGATAATTGCTCATGTACAGATGCTCCTCTTGGAATTCCAGATGGTTCAACTTTGCATTCTGTAATTCAGGTCAAATGAAAATAGTAGAGAGAAACACCAAATATTCTTTTGTGCATGAAAAACTATATGATAATGATATAGTGACCGATTCCAGTACTCGTGACCATGACCAGATAATCAATCGCGCTACCGATCCATTCGAGTTTTTTTTTTTGAATTCTTAGACAATGTATGTTGAATAATTTCTCCCTTAACCTTTTCTATCGATACTATTTTTATGATA

mRNA sequence

CCCAAATCTTATCATTACTGAGAAAAAAGTGAACAAAAATCAAAGAATAAAATGAGCGCCATGTCTATGGAAGCTCAGTTGTTTGTGAATTCCGTAACTAGAATTGGAAGTGGATGGCCTCTGAATCCTCATTTCCTGAGTAATCGGAAAGCCGTTCATTCCGCTACTCTATCGATGCCCAGCCGCCGGCGAACTGTTTCTCGTCGGCGGCTCACCGTGAGTGCGGCGGCGGACAAGATTACGGCGCCGGTGGAAACTCCGGTGAGTATTGTGGCGATTGTTGGTGAAGGAAGCATTAGCCCCTTGAAATCCACTCCATGGGAAGAAGTTATGCTTCATACTGCAAAAAGGCTAAAATGGATCGAAGAAGACTACAAAATGCACGTCTTTGTTGATAGTTTCTGTAATGCAACTCATCAATATTCCGAAAACATTCAAATCATATGCAATGCAGATATTTTGGTTGTTGTTGCTGTCACGAGTAAAGATTCAGTCGTATGGATACAAACAAACTGCAAAAACATCCGAAATATAATCTGCTTTGACTCTGCAACAGATTTAGTTAACAAGTTAGGGGGGTTGTCCTTTCCCAGTGAAACCAAAGGAAATGTGCTGGGGAACATTTTTGGAAATTCTCAGCTGTTGGAGAAAAGAAAGAAATCTGAGGAGGTAGTACAGACCGTATTTGAGGCATGGGATCGTAGTAATTCGGATGATATAAGGTTTTGTTTGTTGGTCATAATCAATGCATATATAAAGCCTGTTCCTATATTGAAGAATCTAAGATCAAAAGGATTTTCAACTTTGAACTGCATGGTTAAAAATTGTGGAAGGCAAATATTGAATTGCTTGATGGATCCTAATTGTAGGAAAGCTCTTCAATGCTTGAATCAGTGCAGCCCTGTGGATCAAGTGTGCAACTACAGGTGCATTGCTTCCTATGAAAGTCCAAATCTTGAAGCATTTTCATTATGTGTGCTGCAGAAGAACAACTGTCTCGAGTTGGACGCAAAAGTTCCTGAAAAGCCCTCCGTGTCTCCAATGGAGAAATTTCGAGGTAAGGACATGTGCCACGAAACAGCAGAAGATCTTTTTGTTGGTTGGTTGGGGAAATTGGAGTGGAGTTGGCGAGTGGTAGCCGGGCAAAACCCTGCTTATGATCAATTTCCATGCCAATACCAATTGTTTTACAGGGGAAAAGCGCGAGGATCGTTTTGGTACGAGCCTGTTTTCATGGTGAAAACATTGGAAGGGAAGCTGGTATGGAGGCGGCGAAGATATCGAGTAAAGAGGGGGGAAACTGCAGGGACATTCTTGTTCAGTGTACTGGACAATGGTGTTGTTTCAAATGAGTTTTGGAGCATTGTGGATGTATGTGACGATCTGTCTTGGGGTTTGTTTCACTATAACGGTGCTGCTCGAGCTGCGGGACAGTCGTATACAGGTGCTGTTCTTGTGAGTCCAGATGGTGCTTACCCTGAGAATCCTCATCAAAAAGAGAGAATTGGTGCTGCTTTGGAGAAATGTGGAATTAAAGAGTGGGAACTCTTTGCTGTTGATAATTGCTCATGTACAGATGCTCCTCTTGGAATTCCAGATGGTTCAACTTTGCATTCTGTAATTCAGGTCAAATGAAAATAGTAGAGAGAAACACCAAATATTCTTTTGTGCATGAAAAACTATATGATAATGATATAGTGACCGATTCCAGTACTCGTGACCATGACCAGATAATCAATCGCGCTACCGATCCATTCGAGTTTTTTTTTTTGAATTCTTAGACAATGTATGTTGAATAATTTCTCCCTTAACCTTTTCTATCGATACTATTTTTATGATA

Coding sequence (CDS)

ATGAGCGCCATGTCTATGGAAGCTCAGTTGTTTGTGAATTCCGTAACTAGAATTGGAAGTGGATGGCCTCTGAATCCTCATTTCCTGAGTAATCGGAAAGCCGTTCATTCCGCTACTCTATCGATGCCCAGCCGCCGGCGAACTGTTTCTCGTCGGCGGCTCACCGTGAGTGCGGCGGCGGACAAGATTACGGCGCCGGTGGAAACTCCGGTGAGTATTGTGGCGATTGTTGGTGAAGGAAGCATTAGCCCCTTGAAATCCACTCCATGGGAAGAAGTTATGCTTCATACTGCAAAAAGGCTAAAATGGATCGAAGAAGACTACAAAATGCACGTCTTTGTTGATAGTTTCTGTAATGCAACTCATCAATATTCCGAAAACATTCAAATCATATGCAATGCAGATATTTTGGTTGTTGTTGCTGTCACGAGTAAAGATTCAGTCGTATGGATACAAACAAACTGCAAAAACATCCGAAATATAATCTGCTTTGACTCTGCAACAGATTTAGTTAACAAGTTAGGGGGGTTGTCCTTTCCCAGTGAAACCAAAGGAAATGTGCTGGGGAACATTTTTGGAAATTCTCAGCTGTTGGAGAAAAGAAAGAAATCTGAGGAGGTAGTACAGACCGTATTTGAGGCATGGGATCGTAGTAATTCGGATGATATAAGGTTTTGTTTGTTGGTCATAATCAATGCATATATAAAGCCTGTTCCTATATTGAAGAATCTAAGATCAAAAGGATTTTCAACTTTGAACTGCATGGTTAAAAATTGTGGAAGGCAAATATTGAATTGCTTGATGGATCCTAATTGTAGGAAAGCTCTTCAATGCTTGAATCAGTGCAGCCCTGTGGATCAAGTGTGCAACTACAGGTGCATTGCTTCCTATGAAAGTCCAAATCTTGAAGCATTTTCATTATGTGTGCTGCAGAAGAACAACTGTCTCGAGTTGGACGCAAAAGTTCCTGAAAAGCCCTCCGTGTCTCCAATGGAGAAATTTCGAGGTAAGGACATGTGCCACGAAACAGCAGAAGATCTTTTTGTTGGTTGGTTGGGGAAATTGGAGTGGAGTTGGCGAGTGGTAGCCGGGCAAAACCCTGCTTATGATCAATTTCCATGCCAATACCAATTGTTTTACAGGGGAAAAGCGCGAGGATCGTTTTGGTACGAGCCTGTTTTCATGGTGAAAACATTGGAAGGGAAGCTGGTATGGAGGCGGCGAAGATATCGAGTAAAGAGGGGGGAAACTGCAGGGACATTCTTGTTCAGTGTACTGGACAATGGTGTTGTTTCAAATGAGTTTTGGAGCATTGTGGATGTATGTGACGATCTGTCTTGGGGTTTGTTTCACTATAACGGTGCTGCTCGAGCTGCGGGACAGTCGTATACAGGTGCTGTTCTTGTGAGTCCAGATGGTGCTTACCCTGAGAATCCTCATCAAAAAGAGAGAATTGGTGCTGCTTTGGAGAAATGTGGAATTAAAGAGTGGGAACTCTTTGCTGTTGATAATTGCTCATGTACAGATGCTCCTCTTGGAATTCCAGATGGTTCAACTTTGCATTCTGTAATTCAGGTCAAATGA

Protein sequence

MSAMSMEAQLFVNSVTRIGSGWPLNPHFLSNRKAVHSATLSMPSRRRTVSRRRLTVSAAADKITAPVETPVSIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIEEDYKMHVFVDSFCNATHQYSENIQIICNADILVVVAVTSKDSVVWIQTNCKNIRNIICFDSATDLVNKLGGLSFPSETKGNVLGNIFGNSQLLEKRKKSEEVVQTVFEAWDRSNSDDIRFCLLVIINAYIKPVPILKNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIASYESPNLEAFSLCVLQKNNCLELDAKVPEKPSVSPMEKFRGKDMCHETAEDLFVGWLGKLEWSWRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKLVWRRRRYRVKRGETAGTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVSPDGAYPENPHQKERIGAALEKCGIKEWELFAVDNCSCTDAPLGIPDGSTLHSVIQVK

Homology

[Close]

BLAST of Sed0027379 vs. NCBI nr
Match: XP_023532406.1 (violaxanthin de-epoxidase, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 983.4 bits (2541), Expect = 7.6e-283
Identity = 472/529 (89.22%), Postives = 496/529 (93.76%), Query Frame = 0


Query: 3   AMSMEAQLFVNSVTRIGSGWPLNPHFLSNRKAVHSATLSMPSRRRTVSRRRLTVSAA--- 62
           ++SMEAQ FVNS TR+G+GWPLN HF  NRKA HS TLSMPSRRR VSRRRLTV+AA   
Sbjct: 8   SVSMEAQWFVNSGTRVGNGWPLNRHFQRNRKAAHSVTLSMPSRRRVVSRRRLTVTAAAVA 67

Query: 63  -ADKITAPVETPVSIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIEEDYKMHVFVDSFC 122
            A+K     ETPV IVAIVGEGSISPLKSTPWEEVMLHTAKRLKWI+E YKMHVF D FC
Sbjct: 68  EANKSATKAETPVRIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIDESYKMHVFADRFC 127

Query: 123 NATHQYSENIQIICNADILVVVAVTSKDSVVWIQTNCKNIRNIICFDSATDLVNKLGGLS 182
           +ATH  ++NIQI+CNADILV+VAVTSKDSVVWIQTNCKN++NIICFDSAT+ VNKLGGLS
Sbjct: 128 DATHPDTKNIQIVCNADILVIVAVTSKDSVVWIQTNCKNVQNIICFDSATEFVNKLGGLS 187

Query: 183 FPSETKGNVLGNIFGNSQLLEKRKKSEEVVQTVFEAWDRSNSDDIRFCLLVIINAYIKPV 242
           FPSET+ NVLGNIFGNSQ+LEKRKKSEEVVQTVFEAWDR NSDDIRFCLLVIINAYIKPV
Sbjct: 188 FPSETERNVLGNIFGNSQVLEKRKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAYIKPV 247

Query: 243 PILKNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIASYE 302
           PILKNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLN+CSPVDQVCNYRCIASYE
Sbjct: 248 PILKNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNKCSPVDQVCNYRCIASYE 307

Query: 303 SPNLEAFSLCVLQKNNCLELDAKVPEKPSVSPMEKFRGKDMCHETAEDLFVGWLGKLEWS 362
           SPNLEAFSLCVLQKNNCLELDAKVPEKP VSPMEKFRGKD+CHETAEDLFVGWLG LEWS
Sbjct: 308 SPNLEAFSLCVLQKNNCLELDAKVPEKPYVSPMEKFRGKDLCHETAEDLFVGWLGNLEWS 367

Query: 363 WRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKLVWRRRRYRVKRGETA 422
           WRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGK+VWRRRRYRVKRG+TA
Sbjct: 368 WRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKMVWRRRRYRVKRGQTA 427

Query: 423 GTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVSPDGAYPEN 482
           GTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHY GAARAAGQSYTGAVLVSPDG+YP+N
Sbjct: 428 GTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYKGAARAAGQSYTGAVLVSPDGSYPQN 487

Query: 483 PHQKERIGAALEKCGIKEWELFAVDNCSCTDAPLGIPDGSTLHSVIQVK 528
            HQKER+ AALEKCGIKEWELFAVDNCSC D PLGIPDGSTLHSVIQVK
Sbjct: 488 DHQKERVVAALEKCGIKEWELFAVDNCSCIDPPLGIPDGSTLHSVIQVK 536

[Close]

BLAST of Sed0027379 vs. NCBI nr
Match: XP_022948244.1 (violaxanthin de-epoxidase, chloroplastic [Cucurbita moschata])

HSP 1 Score: 977.2 bits (2525), Expect = 5.4e-281
Identity = 468/529 (88.47%), Postives = 495/529 (93.57%), Query Frame = 0


Query: 3   AMSMEAQLFVNSVTRIGSGWPLNPHFLSNRKAVHSATLSMPSRRRTVSRRRLTVSAA--- 62
           ++SMEAQ FVNS TR+G+GWPLN HF  NRKA HS TLSMPSRRR VSRRRLTV+AA   
Sbjct: 8   SVSMEAQWFVNSGTRVGNGWPLNRHFQRNRKAAHSVTLSMPSRRRAVSRRRLTVTAAAVA 67

Query: 63  -ADKITAPVETPVSIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIEEDYKMHVFVDSFC 122
            A+K +   ETPV IVAIVGEGSISPLKSTPWEEV+LHTAKRLKWI+E YKMHVF D FC
Sbjct: 68  EANKSSTKAETPVRIVAIVGEGSISPLKSTPWEEVLLHTAKRLKWIDESYKMHVFADRFC 127

Query: 123 NATHQYSENIQIICNADILVVVAVTSKDSVVWIQTNCKNIRNIICFDSATDLVNKLGGLS 182
           + TH  ++NIQI+CNADILV+VAVTS DSVVWIQTNCKN++NIICFDSAT+LVNKLGGLS
Sbjct: 128 DVTHPDTKNIQIVCNADILVIVAVTSNDSVVWIQTNCKNVQNIICFDSATELVNKLGGLS 187

Query: 183 FPSETKGNVLGNIFGNSQLLEKRKKSEEVVQTVFEAWDRSNSDDIRFCLLVIINAYIKPV 242
           FPSET+ NVLGNIFGNSQ+LE+RKKSEEVVQTVFEAWDR NSDDIRFCLLVIINAYIKPV
Sbjct: 188 FPSETERNVLGNIFGNSQVLERRKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAYIKPV 247

Query: 243 PILKNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIASYE 302
           PILKNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIASYE
Sbjct: 248 PILKNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIASYE 307

Query: 303 SPNLEAFSLCVLQKNNCLELDAKVPEKPSVSPMEKFRGKDMCHETAEDLFVGWLGKLEWS 362
           SPNLEAFSLCVLQKNNCLELDAKVPEKP VSPMEKFRGKD+CHETAEDLFVGWLG LEWS
Sbjct: 308 SPNLEAFSLCVLQKNNCLELDAKVPEKPYVSPMEKFRGKDLCHETAEDLFVGWLGNLEWS 367

Query: 363 WRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKLVWRRRRYRVKRGETA 422
           WRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGK+VWRRRRYRVKRG+TA
Sbjct: 368 WRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKMVWRRRRYRVKRGQTA 427

Query: 423 GTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVSPDGAYPEN 482
           GTFLFSVLDNGVVSNEFWSIVDVC+DLSWGLFHY GAARAAGQSYTGAVLVSPDG+YP+N
Sbjct: 428 GTFLFSVLDNGVVSNEFWSIVDVCEDLSWGLFHYKGAARAAGQSYTGAVLVSPDGSYPQN 487

Query: 483 PHQKERIGAALEKCGIKEWELFAVDNCSCTDAPLGIPDGSTLHSVIQVK 528
            HQKER+ AALEKCGIKEWELFAVDNCSC D PLGIPD STLHSVIQVK
Sbjct: 488 DHQKERVVAALEKCGIKEWELFAVDNCSCIDPPLGIPDASTLHSVIQVK 536

[Close]

BLAST of Sed0027379 vs. NCBI nr
Match: XP_023007352.1 (violaxanthin de-epoxidase, chloroplastic [Cucurbita maxima])

HSP 1 Score: 976.9 bits (2524), Expect = 7.1e-281
Identity = 470/525 (89.52%), Postives = 490/525 (93.33%), Query Frame = 0


Query: 6   MEAQLFVNSVTRIGSGWPLNPHFLSNRKAVHSATLSMPSRRRTVSRRRLTVSAA----AD 65
           MEAQ FVNS TR+G+GWPLN HF  N KA HS TLSMPSRRR VSRRRLTV+AA    A+
Sbjct: 11  MEAQWFVNSGTRVGNGWPLNRHFQRNPKAAHSVTLSMPSRRRVVSRRRLTVTAAAVAEAN 70

Query: 66  KITAPVETPVSIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIEEDYKMHVFVDSFCNAT 125
           K     ETPV IVAIVGEGSISPLKSTPWEEVMLHTAKRLKWI+E YKMHVF D FC+ T
Sbjct: 71  KSATKAETPVRIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIDESYKMHVFADRFCDVT 130

Query: 126 HQYSENIQIICNADILVVVAVTSKDSVVWIQTNCKNIRNIICFDSATDLVNKLGGLSFPS 185
           H  ++NIQI+CNADILV+VAVTSKDSVVWIQTNCKN++NIICFDSAT+LVNKLGGLSFPS
Sbjct: 131 HPDTKNIQIVCNADILVIVAVTSKDSVVWIQTNCKNVQNIICFDSATELVNKLGGLSFPS 190

Query: 186 ETKGNVLGNIFGNSQLLEKRKKSEEVVQTVFEAWDRSNSDDIRFCLLVIINAYIKPVPIL 245
           ET+ NVLGNIFGNSQ LEKRKKSEEVVQTVFEAWDR NSDDIRFCLLVIINAYIKPVPIL
Sbjct: 191 ETERNVLGNIFGNSQRLEKRKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAYIKPVPIL 250

Query: 246 KNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIASYESPN 305
           KNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIASYESPN
Sbjct: 251 KNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIASYESPN 310

Query: 306 LEAFSLCVLQKNNCLELDAKVPEKPSVSPMEKFRGKDMCHETAEDLFVGWLGKLEWSWRV 365
           LEAFSLCVLQKNNCLELDAKVPEKP VSPMEKFRGKD+CHETAEDLFVGWLG LEWSWRV
Sbjct: 311 LEAFSLCVLQKNNCLELDAKVPEKPYVSPMEKFRGKDLCHETAEDLFVGWLGNLEWSWRV 370

Query: 366 VAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKLVWRRRRYRVKRGETAGTF 425
           VAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGK+VWRRRRYRVKRG+TAGTF
Sbjct: 371 VAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKMVWRRRRYRVKRGQTAGTF 430

Query: 426 LFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVSPDGAYPENPHQ 485
           LFSVLDNGVVSNEFWSIVDVCDDLSWGLFHY GAARAAGQSYTGAVLVSPDG+YP+N HQ
Sbjct: 431 LFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYKGAARAAGQSYTGAVLVSPDGSYPQNDHQ 490

Query: 486 KERIGAALEKCGIKEWELFAVDNCSCTDAPLGIPDGSTLHSVIQV 527
           KER+ AALEKCGIKEWELFAVDNCSC D PLGIPDGSTLHSVIQV
Sbjct: 491 KERVVAALEKCGIKEWELFAVDNCSCIDPPLGIPDGSTLHSVIQV 535

[Close]

BLAST of Sed0027379 vs. NCBI nr
Match: KAG7035248.1 (Violaxanthin de-epoxidase, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 966.1 bits (2496), Expect = 1.3e-277
Identity = 466/529 (88.09%), Postives = 492/529 (93.01%), Query Frame = 0


Query: 3   AMSMEAQLFVNSVTRIGSGWPLNPHFLSNRKAVHSATLSMPSRRRTVSRRRLTVSAA--- 62
           ++SMEAQ FVNS TR+G+GWPLN HF  NRKA HS TLSMPSRR  VSRRRLTV+A    
Sbjct: 8   SVSMEAQWFVNSGTRVGNGWPLNRHFQRNRKAAHSVTLSMPSRRPAVSRRRLTVTAVAVA 67

Query: 63  -ADKITAPVETPVSIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIEEDYKMHVFVDSFC 122
            A+K     ETPV IVAIVGEGSISPLKSTPWEEVMLHTAKRLKWI+E YKMHVF D FC
Sbjct: 68  EANKSATKAETPVRIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIDESYKMHVFADRFC 127

Query: 123 NATHQYSENIQIICNADILVVVAVTSKDSVVWIQTNCKNIRNIICFDSATDLVNKLGGLS 182
           + TH  +++IQI+C+ADILV+VAVTS DSVVWIQTNCKN++NIICFDSAT+LVNKLGGLS
Sbjct: 128 D-THPDTKDIQIVCDADILVIVAVTSNDSVVWIQTNCKNVQNIICFDSATELVNKLGGLS 187

Query: 183 FPSETKGNVLGNIFGNSQLLEKRKKSEEVVQTVFEAWDRSNSDDIRFCLLVIINAYIKPV 242
           FPSET+ NVLGNIFGNSQ+LEKRKKSEEVVQTVFEAWDR NSDDIRFCLLVIINAYIKPV
Sbjct: 188 FPSETERNVLGNIFGNSQVLEKRKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAYIKPV 247

Query: 243 PILKNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIASYE 302
           PILKNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIASYE
Sbjct: 248 PILKNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIASYE 307

Query: 303 SPNLEAFSLCVLQKNNCLELDAKVPEKPSVSPMEKFRGKDMCHETAEDLFVGWLGKLEWS 362
           SPNLEAFSLCVLQKNNCLELDA+VPEKP VSPMEKFRGKD+CHETAEDLFVGWLG LEWS
Sbjct: 308 SPNLEAFSLCVLQKNNCLELDAEVPEKPYVSPMEKFRGKDLCHETAEDLFVGWLGNLEWS 367

Query: 363 WRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKLVWRRRRYRVKRGETA 422
           WRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGK+VWRRRRYRVKRG+TA
Sbjct: 368 WRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKMVWRRRRYRVKRGQTA 427

Query: 423 GTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVSPDGAYPEN 482
           GTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHY GAARAAGQSYTGAVLVSPDG+YP+N
Sbjct: 428 GTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYKGAARAAGQSYTGAVLVSPDGSYPQN 487

Query: 483 PHQKERIGAALEKCGIKEWELFAVDNCSCTDAPLGIPDGSTLHSVIQVK 528
            HQKER+ AALEKCGIKEWELFAVDNCSC D PLGIP GSTLHSVIQVK
Sbjct: 488 DHQKERVVAALEKCGIKEWELFAVDNCSCIDPPLGIPGGSTLHSVIQVK 535

[Close]

BLAST of Sed0027379 vs. NCBI nr
Match: KAG6605288.1 (S-adenosylmethionine carrier 1, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 963.0 bits (2488), Expect = 1.1e-276
Identity = 464/524 (88.55%), Postives = 488/524 (93.13%), Query Frame = 0


Query: 6   MEAQLFVNSVTRIGSGWPLNPHFLSNRKAVHSATLSMPSRRRTVSRRRLTVSAA----AD 65
           MEAQ FVNS TR+G+GWPLN HF  NRKA HS TLSMPSRR  VSRRRLTV+A     A+
Sbjct: 1   MEAQWFVNSGTRVGNGWPLNRHFQRNRKAAHSVTLSMPSRRPAVSRRRLTVTAVAVAEAN 60

Query: 66  KITAPVETPVSIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIEEDYKMHVFVDSFCNAT 125
           K     ETPV IVAIVGEGSISPLKSTPWEEVMLHTAKRLKWI+E YKMHVF D FC+ T
Sbjct: 61  KSATKAETPVRIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIDESYKMHVFADRFCD-T 120

Query: 126 HQYSENIQIICNADILVVVAVTSKDSVVWIQTNCKNIRNIICFDSATDLVNKLGGLSFPS 185
           H  +++IQI+C+ADILV+VAVTS DSVVWIQTNCKN++NIICFDSAT+LVNKLGGLSFPS
Sbjct: 121 HPDTKDIQIVCDADILVIVAVTSNDSVVWIQTNCKNVQNIICFDSATELVNKLGGLSFPS 180

Query: 186 ETKGNVLGNIFGNSQLLEKRKKSEEVVQTVFEAWDRSNSDDIRFCLLVIINAYIKPVPIL 245
           ET+ NVLGNIFGNSQ+LEKRKKSEEVVQTVFEAWDR NSDDIRFCLLVIINAYIKPVPIL
Sbjct: 181 ETERNVLGNIFGNSQVLEKRKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAYIKPVPIL 240

Query: 246 KNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIASYESPN 305
           KNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIASYESPN
Sbjct: 241 KNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIASYESPN 300

Query: 306 LEAFSLCVLQKNNCLELDAKVPEKPSVSPMEKFRGKDMCHETAEDLFVGWLGKLEWSWRV 365
           LEAFSLCVLQKNNCLELDA+VPEKP VSPMEKFRGKD+CHETAEDLFVGWLG LEWSWRV
Sbjct: 301 LEAFSLCVLQKNNCLELDAEVPEKPYVSPMEKFRGKDLCHETAEDLFVGWLGNLEWSWRV 360

Query: 366 VAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKLVWRRRRYRVKRGETAGTF 425
           VAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGK+VWRRRRYRVKRG+TAGTF
Sbjct: 361 VAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKMVWRRRRYRVKRGQTAGTF 420

Query: 426 LFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVSPDGAYPENPHQ 485
           LFSVLDNGVVSNEFWSIVDVCDDLSWGLFHY GAARAAGQSYTGAVLVSPDG+YP+N HQ
Sbjct: 421 LFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYKGAARAAGQSYTGAVLVSPDGSYPQNDHQ 480

Query: 486 KERIGAALEKCGIKEWELFAVDNCSCTDAPLGIPDGSTLHSVIQ 526
           KER+ AALEKCGIKEWELFAVDNCSC D PLGIPDGSTLHSVIQ
Sbjct: 481 KERVVAALEKCGIKEWELFAVDNCSCIDPPLGIPDGSTLHSVIQ 523

[Close]

BLAST of Sed0027379 vs. ExPASy TrEMBL
Match: A0A6J1G9B9 (violaxanthin de-epoxidase, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111451875 PE=4 SV=1)

HSP 1 Score: 977.2 bits (2525), Expect = 2.6e-281
Identity = 468/529 (88.47%), Postives = 495/529 (93.57%), Query Frame = 0


Query: 3   AMSMEAQLFVNSVTRIGSGWPLNPHFLSNRKAVHSATLSMPSRRRTVSRRRLTVSAA--- 62
           ++SMEAQ FVNS TR+G+GWPLN HF  NRKA HS TLSMPSRRR VSRRRLTV+AA   
Sbjct: 8   SVSMEAQWFVNSGTRVGNGWPLNRHFQRNRKAAHSVTLSMPSRRRAVSRRRLTVTAAAVA 67

Query: 63  -ADKITAPVETPVSIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIEEDYKMHVFVDSFC 122
            A+K +   ETPV IVAIVGEGSISPLKSTPWEEV+LHTAKRLKWI+E YKMHVF D FC
Sbjct: 68  EANKSSTKAETPVRIVAIVGEGSISPLKSTPWEEVLLHTAKRLKWIDESYKMHVFADRFC 127

Query: 123 NATHQYSENIQIICNADILVVVAVTSKDSVVWIQTNCKNIRNIICFDSATDLVNKLGGLS 182
           + TH  ++NIQI+CNADILV+VAVTS DSVVWIQTNCKN++NIICFDSAT+LVNKLGGLS
Sbjct: 128 DVTHPDTKNIQIVCNADILVIVAVTSNDSVVWIQTNCKNVQNIICFDSATELVNKLGGLS 187

Query: 183 FPSETKGNVLGNIFGNSQLLEKRKKSEEVVQTVFEAWDRSNSDDIRFCLLVIINAYIKPV 242
           FPSET+ NVLGNIFGNSQ+LE+RKKSEEVVQTVFEAWDR NSDDIRFCLLVIINAYIKPV
Sbjct: 188 FPSETERNVLGNIFGNSQVLERRKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAYIKPV 247

Query: 243 PILKNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIASYE 302
           PILKNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIASYE
Sbjct: 248 PILKNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIASYE 307

Query: 303 SPNLEAFSLCVLQKNNCLELDAKVPEKPSVSPMEKFRGKDMCHETAEDLFVGWLGKLEWS 362
           SPNLEAFSLCVLQKNNCLELDAKVPEKP VSPMEKFRGKD+CHETAEDLFVGWLG LEWS
Sbjct: 308 SPNLEAFSLCVLQKNNCLELDAKVPEKPYVSPMEKFRGKDLCHETAEDLFVGWLGNLEWS 367

Query: 363 WRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKLVWRRRRYRVKRGETA 422
           WRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGK+VWRRRRYRVKRG+TA
Sbjct: 368 WRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKMVWRRRRYRVKRGQTA 427

Query: 423 GTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVSPDGAYPEN 482
           GTFLFSVLDNGVVSNEFWSIVDVC+DLSWGLFHY GAARAAGQSYTGAVLVSPDG+YP+N
Sbjct: 428 GTFLFSVLDNGVVSNEFWSIVDVCEDLSWGLFHYKGAARAAGQSYTGAVLVSPDGSYPQN 487

Query: 483 PHQKERIGAALEKCGIKEWELFAVDNCSCTDAPLGIPDGSTLHSVIQVK 528
            HQKER+ AALEKCGIKEWELFAVDNCSC D PLGIPD STLHSVIQVK
Sbjct: 488 DHQKERVVAALEKCGIKEWELFAVDNCSCIDPPLGIPDASTLHSVIQVK 536

[Close]

BLAST of Sed0027379 vs. ExPASy TrEMBL
Match: A0A6J1KYG1 (violaxanthin de-epoxidase, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111499873 PE=4 SV=1)

HSP 1 Score: 976.9 bits (2524), Expect = 3.4e-281
Identity = 470/525 (89.52%), Postives = 490/525 (93.33%), Query Frame = 0


Query: 6   MEAQLFVNSVTRIGSGWPLNPHFLSNRKAVHSATLSMPSRRRTVSRRRLTVSAA----AD 65
           MEAQ FVNS TR+G+GWPLN HF  N KA HS TLSMPSRRR VSRRRLTV+AA    A+
Sbjct: 11  MEAQWFVNSGTRVGNGWPLNRHFQRNPKAAHSVTLSMPSRRRVVSRRRLTVTAAAVAEAN 70

Query: 66  KITAPVETPVSIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIEEDYKMHVFVDSFCNAT 125
           K     ETPV IVAIVGEGSISPLKSTPWEEVMLHTAKRLKWI+E YKMHVF D FC+ T
Sbjct: 71  KSATKAETPVRIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIDESYKMHVFADRFCDVT 130

Query: 126 HQYSENIQIICNADILVVVAVTSKDSVVWIQTNCKNIRNIICFDSATDLVNKLGGLSFPS 185
           H  ++NIQI+CNADILV+VAVTSKDSVVWIQTNCKN++NIICFDSAT+LVNKLGGLSFPS
Sbjct: 131 HPDTKNIQIVCNADILVIVAVTSKDSVVWIQTNCKNVQNIICFDSATELVNKLGGLSFPS 190

Query: 186 ETKGNVLGNIFGNSQLLEKRKKSEEVVQTVFEAWDRSNSDDIRFCLLVIINAYIKPVPIL 245
           ET+ NVLGNIFGNSQ LEKRKKSEEVVQTVFEAWDR NSDDIRFCLLVIINAYIKPVPIL
Sbjct: 191 ETERNVLGNIFGNSQRLEKRKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAYIKPVPIL 250

Query: 246 KNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIASYESPN 305
           KNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIASYESPN
Sbjct: 251 KNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIASYESPN 310

Query: 306 LEAFSLCVLQKNNCLELDAKVPEKPSVSPMEKFRGKDMCHETAEDLFVGWLGKLEWSWRV 365
           LEAFSLCVLQKNNCLELDAKVPEKP VSPMEKFRGKD+CHETAEDLFVGWLG LEWSWRV
Sbjct: 311 LEAFSLCVLQKNNCLELDAKVPEKPYVSPMEKFRGKDLCHETAEDLFVGWLGNLEWSWRV 370

Query: 366 VAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKLVWRRRRYRVKRGETAGTF 425
           VAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGK+VWRRRRYRVKRG+TAGTF
Sbjct: 371 VAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKMVWRRRRYRVKRGQTAGTF 430

Query: 426 LFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVSPDGAYPENPHQ 485
           LFSVLDNGVVSNEFWSIVDVCDDLSWGLFHY GAARAAGQSYTGAVLVSPDG+YP+N HQ
Sbjct: 431 LFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYKGAARAAGQSYTGAVLVSPDGSYPQNDHQ 490

Query: 486 KERIGAALEKCGIKEWELFAVDNCSCTDAPLGIPDGSTLHSVIQV 527
           KER+ AALEKCGIKEWELFAVDNCSC D PLGIPDGSTLHSVIQV
Sbjct: 491 KERVVAALEKCGIKEWELFAVDNCSCIDPPLGIPDGSTLHSVIQV 535

[Close]

BLAST of Sed0027379 vs. ExPASy TrEMBL
Match: A0A0A0LQ45 (VDE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G297200 PE=4 SV=1)

HSP 1 Score: 913.3 bits (2359), Expect = 4.7e-262
Identity = 445/531 (83.80%), Postives = 476/531 (89.64%), Query Frame = 0


Query: 4   MSMEAQLFVNSVTRIGSGWPLNPH---FLSNRKAVHSATLSMPSRRRTVSRRRLTVS--- 63
           M +E     NS T IG+GWPLNPH   FLS+RK  +  TLSMPS R TVSRR LTV    
Sbjct: 1   MKVELNFNFNSGTSIGNGWPLNPHFHFFLSHRKPTYFPTLSMPSHRPTVSRRLLTVPPPV 60

Query: 64  -AAADKITAPVETPVSIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIEEDYKMHVFVDS 123
            A A+K  A  +TPV IVAIVGEGSISPLKSTPWEEVMLHTAKRLKW++E Y+MHVF D+
Sbjct: 61  VAEANKNMAMADTPVRIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWVDECYEMHVFADN 120

Query: 124 FCNATHQYSENIQIICNADILVVVAVTSKDSVVWIQTNCKNIRNIICFDSATDLVNKLGG 183
            CN T Q +E IQIIC ADILVVVAVT+KDSV+WI+ NC+NI+NIICF+SA +LVNKLGG
Sbjct: 121 VCNVTRQDTETIQIICEADILVVVAVTTKDSVLWIRLNCENIQNIICFESAAELVNKLGG 180

Query: 184 LSFPSETKGNVLGNIFGNSQLLEKRKKSEEVVQTVFEAWDRSNSDDIRFCLLVIINAYIK 243
           +SF SETKGN+L N FGNSQL+EKRKKSEEVVQTVFEAWDR NSDDIRFCLLVIINAYIK
Sbjct: 181 ISFLSETKGNLLENFFGNSQLMEKRKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAYIK 240

Query: 244 PVPILKNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIAS 303
           PVPILKNLRSKGFSTLNCMVKNCGRQILNCLMD NCRKALQCLNQCSPVDQVCNYRCIAS
Sbjct: 241 PVPILKNLRSKGFSTLNCMVKNCGRQILNCLMDANCRKALQCLNQCSPVDQVCNYRCIAS 300

Query: 304 YESPNLEAFSLCVLQKNNCLELDAKVPEKPSVSPMEKFRGKDMCHETAEDLFVGWLGKLE 363
           YESPNLEAFSLCVLQK+NCL+LDAKVPEKP V P+E+FRGK++CHETAEDLF+GWLG LE
Sbjct: 301 YESPNLEAFSLCVLQKHNCLDLDAKVPEKPYVPPIERFRGKEICHETAEDLFIGWLGSLE 360

Query: 364 WSWRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKLVWRRRRYRVKRGE 423
           WSWRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKLVWRRRRYRVKRG+
Sbjct: 361 WSWRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKLVWRRRRYRVKRGK 420

Query: 424 TAGTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVSPDGAYP 483
            AGTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVS DG YP
Sbjct: 421 IAGTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVSRDGKYP 480

Query: 484 ENPHQKERIGAALEKCGIKEWELFAVDNCSCTDAPLGIPDGSTLHSVIQVK 528
           EN HQKERI AALEKCGIKEWELFAVDN SC D PLGIPDGSTLH+VI+VK
Sbjct: 481 ENDHQKERIVAALEKCGIKEWELFAVDNSSCLDPPLGIPDGSTLHNVIEVK 531

[Close]

BLAST of Sed0027379 vs. ExPASy TrEMBL
Match: A0A1S3C790 (violaxanthin de-epoxidase, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103497481 PE=4 SV=1)

HSP 1 Score: 910.2 bits (2351), Expect = 4.0e-261
Identity = 440/529 (83.18%), Postives = 477/529 (90.17%), Query Frame = 0


Query: 6   MEAQLFVNSVTRIGSGWPLNPH---FLSNRKAVHSATLSMPSRRRTVSRRRLTVS----A 65
           M+ +L++NS T IG+GWPLNP+   FLS+RK  HS TLSMPS R TVSRR LTV     A
Sbjct: 1   MKVELYLNSGTSIGNGWPLNPNFHFFLSHRKPTHSPTLSMPSHRPTVSRRLLTVPPPVVA 60

Query: 66  AADKITAPVETPVSIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIEEDYKMHVFVDSFC 125
            A+K  A  +TPV IVAIVGEGSISPLKSTPWEEVMLHTAKRLKW++  Y+MHVF D+ C
Sbjct: 61  EANKNVAMTDTPVRIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWVDGGYEMHVFADNVC 120

Query: 126 NATHQYSENIQIICNADILVVVAVTSKDSVVWIQTNCKNIRNIICFDSATDLVNKLGGLS 185
           N T Q +  IQIIC ADILVVVAVTS+DSV+WI+ NC+NI+NIICF+SA +LVNKLGG+S
Sbjct: 121 NVTRQDTGTIQIICEADILVVVAVTSQDSVLWIRMNCENIQNIICFESAAELVNKLGGIS 180

Query: 186 FPSETKGNVLGNIFGNSQLLEKRKKSEEVVQTVFEAWDRSNSDDIRFCLLVIINAYIKPV 245
           FPSETKGN+L + FGNSQLLEKRKKSEEVVQTVFEAWDR NSDDIRFCLLVIINAYIKPV
Sbjct: 181 FPSETKGNLLESFFGNSQLLEKRKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAYIKPV 240

Query: 246 PILKNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIASYE 305
           PIL+NLRSKGFSTLNCMVKNCGRQILNCLMD NCRKALQCLNQCSPVDQVCNYRCIASYE
Sbjct: 241 PILQNLRSKGFSTLNCMVKNCGRQILNCLMDANCRKALQCLNQCSPVDQVCNYRCIASYE 300

Query: 306 SPNLEAFSLCVLQKNNCLELDAKVPEKPSVSPMEKFRGKDMCHETAEDLFVGWLGKLEWS 365
           SPNLEAFSLCVLQK+NCL+LDAK+PEKP V P+E+FRGK++CHE AEDLF+GWLG LEWS
Sbjct: 301 SPNLEAFSLCVLQKHNCLDLDAKIPEKPYVPPIERFRGKELCHEMAEDLFIGWLGSLEWS 360

Query: 366 WRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKLVWRRRRYRVKRGETA 425
           WRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGK+VWRRRRYRVKRG+ A
Sbjct: 361 WRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKMVWRRRRYRVKRGKIA 420

Query: 426 GTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVSPDGAYPEN 485
           GTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVS DG YPEN
Sbjct: 421 GTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVSRDGKYPEN 480

Query: 486 PHQKERIGAALEKCGIKEWELFAVDNCSCTDAPLGIPDGSTLHSVIQVK 528
            HQKERI AALEKCGIK+WELFAVDN SC D PLGIPDGSTLH VI+VK
Sbjct: 481 DHQKERIVAALEKCGIKDWELFAVDNSSCLDPPLGIPDGSTLHYVIEVK 529

[Close]

BLAST of Sed0027379 vs. ExPASy TrEMBL
Match: A0A6B7FH27 (Violaxanthin de-epoxidase-related protein OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 909.1 bits (2348), Expect = 8.8e-261
Identity = 444/531 (83.62%), Postives = 475/531 (89.45%), Query Frame = 0


Query: 4   MSMEAQLFVNSVTRIGSGWPLNPH---FLSNRKAVHSATLSMPSRRRTVSRRRLTVS--- 63
           M +E     NS T IG+GWPLNPH   FLS+RK  +  TLSMPS R TVSRR LTV    
Sbjct: 1   MKVELNFNFNSGTSIGNGWPLNPHFHFFLSHRKPTYFPTLSMPSHRPTVSRRLLTVPPPV 60

Query: 64  -AAADKITAPVETPVSIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIEEDYKMHVFVDS 123
            A A+K  A  +TPV IVAIVGEGSISPLKSTPWEEVMLHTAKRLKW++E Y+MHVF D+
Sbjct: 61  VAEANKNMAMADTPVRIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWVDECYEMHVFADN 120

Query: 124 FCNATHQYSENIQIICNADILVVVAVTSKDSVVWIQTNCKNIRNIICFDSATDLVNKLGG 183
            CN T Q +E IQIIC ADILVVVAVT+KDSV+WI+ NC+NI+NIICF+SA +LVNKLGG
Sbjct: 121 VCNVTRQDTETIQIICEADILVVVAVTTKDSVLWIRLNCENIQNIICFESAAELVNKLGG 180

Query: 184 LSFPSETKGNVLGNIFGNSQLLEKRKKSEEVVQTVFEAWDRSNSDDIRFCLLVIINAYIK 243
           +SF SETKGN+L N FGNSQL+EKRKKSEEVVQTVFEAWDR NSDDIRFCLLVIINAYIK
Sbjct: 181 ISFLSETKGNLLENFFGNSQLMEKRKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAYIK 240

Query: 244 PVPILKNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIAS 303
           PVPILKNLRSKGFSTLNCMVKNCGRQILNCLMD NCRKALQCLNQCSPVDQVCNYRCIAS
Sbjct: 241 PVPILKNLRSKGFSTLNCMVKNCGRQILNCLMDANCRKALQCLNQCSPVDQVCNYRCIAS 300

Query: 304 YESPNLEAFSLCVLQKNNCLELDAKVPEKPSVSPMEKFRGKDMCHETAEDLFVGWLGKLE 363
           YESPNLEAFSLCVLQK+NCL+LDAKVPEKP V P+E+FRGK++CHETAEDLF+GWLG LE
Sbjct: 301 YESPNLEAFSLCVLQKHNCLDLDAKVPEKPYVPPIERFRGKEICHETAEDLFIGWLGSLE 360

Query: 364 WSWRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKLVWRRRRYRVKRGE 423
           WSWRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKLVWRRRRYRVKRG+
Sbjct: 361 WSWRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKLVWRRRRYRVKRGK 420

Query: 424 TAGTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVSPDGAYP 483
            AGTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVS DG YP
Sbjct: 421 IAGTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVSRDGKYP 480

Query: 484 ENPHQKERIGAALEKCGIKEWELFAVDNCSCTDAPLGIPDGSTLHSVIQVK 528
           EN  QKERI AALEKCGIKEWELFAVDN SC D PLGIPDGSTLH+VI+VK
Sbjct: 481 ENDLQKERIVAALEKCGIKEWELFAVDNSSCLDPPLGIPDGSTLHNVIEVK 531

[Close]

BLAST of Sed0027379 vs. TAIR 10
Match: AT2G21860.1 (violaxanthin de-epoxidase-related )

HSP 1 Score: 688.7 bits (1776), Expect = 3.6e-198
Identity = 334/484 (69.01%), Postives = 390/484 (80.58%), Query Frame = 0


Query: 44  SRRRTVSRRRLTVSAAADKITAPVETPVSIVAIVGEGSISPLKSTPWEEVMLHTAKRLKW 103
           SRR   +  R+  +  + KI  P E PV ++A+VG+G +SPLKST WEEVMLHTA+RLKW
Sbjct: 46  SRRGRTTVVRVLETEKSTKIEKP-EPPVKLIALVGKGEVSPLKSTSWEEVMLHTARRLKW 105

Query: 104 IEEDYKMHVFVDSFCNATHQYSENI-QIICNADILVVVAVTSKDSVVWIQTNCKNIRNII 163
           ++E Y+M VF D   ++  Q + N+ Q +   DILVVVAV + +SV WIQTN KN++N+I
Sbjct: 106 VDEGYEMLVFDDEIVSSNDQRAMNLTQELNQTDILVVVAVNNSESVNWIQTNSKNVKNMI 165

Query: 164 CFDSATDLVNKLGGLSFPSETKGNVLGNIFGNSQLLEKRKKSEEVVQTVFEAWDRSNSDD 223
           CF+S+ +L+N+LGG    S                + K K+  EVV+TV +AW+R NSDD
Sbjct: 166 CFESSPNLMNRLGGTDVGS----------------VNKDKEVTEVVKTVGDAWERRNSDD 225

Query: 224 IRFCLLVIINAYIKPVPILKNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQC 283
           IRFCLLVIINAYI+PVP+L+NLRSKGFSTL+CMVKNCG QILNCL+DPNCRKALQCLNQC
Sbjct: 226 IRFCLLVIINAYIRPVPVLQNLRSKGFSTLSCMVKNCGPQILNCLLDPNCRKALQCLNQC 285

Query: 284 SPVDQVCNYRCIASYESPNLEAFSLCVLQKNNCLELDAKVPEKPSVSPMEKFRGKDMCHE 343
           SPVDQVC+YRCIASYE P  EAFSLCVLQK+NCLELDAK+PEKP V PM  FRGK++CH+
Sbjct: 286 SPVDQVCSYRCIASYEGPYFEAFSLCVLQKHNCLELDAKIPEKPYVPPMTSFRGKELCHD 345

Query: 344 TAEDLFVGWLGKLEWSWRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGK 403
           TAEDLFVGWLG+LEWSWRVVAGQNPAYDQFPCQYQLFYRGK + SFWYEPVF V+TLE K
Sbjct: 346 TAEDLFVGWLGELEWSWRVVAGQNPAYDQFPCQYQLFYRGKGKSSFWYEPVFQVRTLEEK 405

Query: 404 LVWRRRRYRVKRGETAGTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQS 463
           LVWRRRRY VKRG+   TF FSVLDNGVVSNEFW+IVDV DDLSWGLFHY+GAAR AGQS
Sbjct: 406 LVWRRRRYSVKRGKIPATFRFSVLDNGVVSNEFWTIVDVSDDLSWGLFHYHGAARVAGQS 465

Query: 464 YTGAVLVSPDGAYPENPHQKERIGAALEKCGIKEWELFAVDNCSCTDAPLGIPDGSTLHS 523
           YTGAVLV+PDG+YP     KER+ +ALEKCGIKEWELFAVDNCSC + PLGIP GS LHS
Sbjct: 466 YTGAVLVTPDGSYPAE-KDKERLQSALEKCGIKEWELFAVDNCSCENPPLGIPQGSRLHS 511

Query: 524 VIQV 527
            I +
Sbjct: 526 RISI 511

The following BLAST results are available for this feature:

BLAST of Sed0027379 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023532406.1	7.6e-283	89.22	violaxanthin de-epoxidase, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_022948244.1	5.4e-281	88.47	violaxanthin de-epoxidase, chloroplastic [Cucurbita moschata]	[more]
XP_023007352.1	7.1e-281	89.52	violaxanthin de-epoxidase, chloroplastic [Cucurbita maxima]	[more]
KAG7035248.1	1.3e-277	88.09	Violaxanthin de-epoxidase, chloroplastic [Cucurbita argyrosperma subsp. argyrosp...	[more]
KAG6605288.1	1.1e-276	88.55	S-adenosylmethionine carrier 1, chloroplastic/mitochondrial, partial [Cucurbita ...	[more]

BLAST of Sed0027379 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0027379 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G9B9	2.6e-281	88.47	violaxanthin de-epoxidase, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1KYG1	3.4e-281	89.52	violaxanthin de-epoxidase, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A0A0LQ45	4.7e-262	83.80	VDE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G297200 PE=4 SV...	[more]
A0A1S3C790	4.0e-261	83.18	violaxanthin de-epoxidase, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A6B7FH27	8.8e-261	83.62	Violaxanthin de-epoxidase-related protein OS=Cucumis sativus OX=3659 PE=2 SV=1	[more]

BLAST of Sed0027379 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21860.1	3.6e-198	69.01	violaxanthin de-epoxidase-related	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012674	Calycin	GENE3D	2.40.128.20		coord: 243..403 e-value: 1.1E-38 score: 134.8
IPR010788	VDE lipocalin domain	PFAM	PF07137	VDE	coord: 143..395 e-value: 6.7E-50 score: 169.8
None	No IPR available	PANTHER	PTHR33970:SF2	OS01G0716400 PROTEIN	coord: 1..417
IPR044682	Violaxanthin de-epoxidase	PANTHER	PTHR33970	VIOLAXANTHIN DE-EPOXIDASE, CHLOROPLASTIC-RELATED	coord: 1..417

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0027379.1	Sed0027379.1	mRNA
Sed0027379.2	Sed0027379.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010028	xanthophyll cycle
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0046422	violaxanthin de-epoxidase activity