Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCAAATCTTATCATTACTGAGAAAAAAGTGAACAAAAATCAAAGAATAAAATGAGCGCCATGTCTATGGAAGCTCAGTTGTTTGTGAATTCCGTAACTAGAATTGGAAGTGGATGGCCTCTGAATCCTCATTTCCTGAGTAATCGGAAAGCCGTTCATTCCGCTACTCTATCGATGCCCAGCCGCCGGCGAACTGTTTCTCGTCGGCGGCTCACCGTGAGTGCGGCGGCGGACAAGATTACGGCGCCGGTGGAAACTCCGGTGAGTATTGTGGCGATTGTTGGTGAAGGAAGCATTAGCCCCTTGAAATCCACTCCATGGGAAGAAGTTATGCTTCATACTGTGAGTACTAATCATTTTAATTCACTCGTTCTTGTTTCCTTATTGCAATTTCCCAATATTTTTGTTTTGAATTCTCGGTTGGATCGTTTTCTTCTGGCTGGTATGTTCATGTGTGCAAAACATTTCATTGTCCATAATCAATGATAAAGATAATTGTTACTAGAAAATACCCAACAGAGGCATTAAAGTGAAATCACAATGCATGTATGGGAGGGACTTTTTAAGGTGCAAAATCAACTTTGTCATTTCCAAAAATCACTAATAAGGGTATGACAAAGTCACAAAAGTATAAATCATTAAGTGGTTAGAATTGTGAGTTCATTCTACACTGGCTACCTACCTAAAAATTAATTTTTTGAGTTTCATTTACTAACCTAATATAATTGGGTCAGGTGATTGTCTCATAAGAATAATTGGGTCCATTGAAGATCTCAAGAAAGTTAGCTCAAATAGCCTGATAGAAGCATAGCTTAGCATTCGAAGTATTACTTCCTTTCACGAGGTCAGAGGTTTGAATCTCCATCCTGCATTTTTTGTATTAAAAAAAGATTTTTACAAGTTCTTTTGATTACCACAGAAACCATTGAAGGCCTAAAGTAAGTGAAATCCATAGTATCTTTTAATCCTCCACAAAGCTACCGACCTATGAAGAAATTTAGTTCTTAAAGACTTTAACCTTTTAGAGTTTGACAAAGAAAGAGGAAGACAATGAGGGACAAGAAGGATTAGCAATAAAGAAGATAATATTTTAGTTTACTACACTAAATATTCATGATTAAGCATGAATATTCATGTATTGATAAACTACTCTGTTGTAAACCTTTTATTTTCCACGGCATAATAAAATAATGAATGAGAAGTTATTTTAGTCAAATGTACTTCCAAAATATTTTAGAAGATTGCTACCCTTTCTTCACCAAGGCACCATTTTTTTAAACCGGAAAATCGGAGCTTTGCTCCACTATACCCGGGATAACCACGTCCGTCCCTAGACTAGGCACTAGAAGATATCGAAGGAATGGAGACACGGGTGGTGTCTACAAATTGATGTCACAGGTGAGTCTCGAATCTAGGACTTTGAGGGGAGCATACTTTCAAAGTCCAAGTTTTCAATCACTGTGCCCTTGAGGACCCCTCGGCACCAATTAGACACAAGAGATGCTCCTACTCTTAATTTATTGTTGTGCTTTTACAGTGCCCATCTCCTTAAATGCTAGTGGAGCTAATGTGCATCTTAAATTCTTATTTAGATTAGCTTCATTTTGTTAAGAAAAAGGAAGAAGACATTCAAGTAGAGATAAGCCAGAAAAAAACACTCTTTATTTAGCAACCTCATCAACTTTGCCTTCATAATGGCTTTTACCTGTTTCTATGTTGCTCTCTATTAACAGGCAAAAAGGCTAAAATGGATCGAAGAAGACTACAAAATGCACGTCTTTGTTGATAGTTTCTGTAATGCAACTCATCAATATTCCGAAAACATTCAAATCATATGCAATGCAGATATTTTGGTTGTTGTTGCTGTCACGAGTAAAGATTCAGTCGTATGGATACAAACAAACTGCAAAAACATCCGAAATATAATCTGCTTTGACTCTGCAACAGATTTAGTTAACAAGTTAGGGGGGTTGTCCTTTCCCAGTGAAACCAAAGGAAATGTGCTGGGGAACATTTTTGGAAATTCTCAGCTGTTGGAGAAAAGAAAGAAATCTGAGGAGGTAGTACAGACCGTATTTGAGGCATGGGATCGTAGTAATTCGGATGATATAAGGTTTTGTTTGTTGGTCATAATCAATGCATATATAAAGCCTGTTCCTATATTGAAGAATCTAAGATCAAAAGGATTTTCAACTTTGAACTGCATGGTTAAAAATTGTGGAAGGCAAATATTGAATTGCTTGATGGATCCTAATTGTAGGAAAGCTCTTCAATGCTTGAATCAGTGCAGCCCTGTGGATCAAGTGTGCAACTACAGGTGCATTGCTTCCTATGAAAGTCCAAATCTTGAAGCATTTTCATTATGTGTGCTGCAGAAGAACAACTGTCTCGAGTTGGACGCAAAAGTTCCTGAAAAGCCCTCCGTGTCTCCAATGGAGAAATTTCGAGGTAAGGACATGTGCCACGAAACAGCAGAAGATCTTTTTGTTGGTTGGTTGGGGAAATTGGAGTGGAGTTGGCGAGTGGTAGCCGGGCAAAACCCTGCTTATGATCAATTTCCATGCCAATACCAATTGTTTTACAGGGGAAAAGCGCGAGGATCGTTTTGGTACGAGCCTGTTTTCATGGTGAAAACATTGGAAGGGAAGCTGGTATGGAGGCGGCGAAGATATCGAGTAAAGAGGGGGGAAACTGCAGGGACATTCTTGTTCAGTGTACTGGACAATGGTGTTGTTTCAAATGAGTTTTGGAGCATTGTGGATGTATGTGACGATCTGTCTTGGGGTTTGTTTCACTATAACGGTGCTGCTCGAGCTGCGGGACAGTCGTATACAGGTGCTGTTCTTGTGAGTCCAGATGGTGCTTACCCTGAGAATCCTCATCAAAAAGAGAGAATTGGTGCTGCTTTGGAGAAATGTGGAATTAAAGAGTGGGAACTCTTTGCTGTTGATAATTGCTCATGTACAGATGCTCCTCTTGGAATTCCAGATGGTTCAACTTTGCATTCTGTAATTCAGGTCAAATGAAAATAGTAGAGAGAAACACCAAATATTCTTTTGTGCATGAAAAACTATATGATAATGATATAGTGACCGATTCCAGTACTCGTGACCATGACCAGATAATCAATCGCGCTACCGATCCATTCGAGTTTTTTTTTTTGAATTCTTAGACAATGTATGTTGAATAATTTCTCCCTTAACCTTTTCTATCGATACTATTTTTATGATA
mRNA sequence
CCCAAATCTTATCATTACTGAGAAAAAAGTGAACAAAAATCAAAGAATAAAATGAGCGCCATGTCTATGGAAGCTCAGTTGTTTGTGAATTCCGTAACTAGAATTGGAAGTGGATGGCCTCTGAATCCTCATTTCCTGAGTAATCGGAAAGCCGTTCATTCCGCTACTCTATCGATGCCCAGCCGCCGGCGAACTGTTTCTCGTCGGCGGCTCACCGTGAGTGCGGCGGCGGACAAGATTACGGCGCCGGTGGAAACTCCGGTGAGTATTGTGGCGATTGTTGGTGAAGGAAGCATTAGCCCCTTGAAATCCACTCCATGGGAAGAAGTTATGCTTCATACTGCAAAAAGGCTAAAATGGATCGAAGAAGACTACAAAATGCACGTCTTTGTTGATAGTTTCTGTAATGCAACTCATCAATATTCCGAAAACATTCAAATCATATGCAATGCAGATATTTTGGTTGTTGTTGCTGTCACGAGTAAAGATTCAGTCGTATGGATACAAACAAACTGCAAAAACATCCGAAATATAATCTGCTTTGACTCTGCAACAGATTTAGTTAACAAGTTAGGGGGGTTGTCCTTTCCCAGTGAAACCAAAGGAAATGTGCTGGGGAACATTTTTGGAAATTCTCAGCTGTTGGAGAAAAGAAAGAAATCTGAGGAGGTAGTACAGACCGTATTTGAGGCATGGGATCGTAGTAATTCGGATGATATAAGGTTTTGTTTGTTGGTCATAATCAATGCATATATAAAGCCTGTTCCTATATTGAAGAATCTAAGATCAAAAGGATTTTCAACTTTGAACTGCATGGTTAAAAATTGTGGAAGGCAAATATTGAATTGCTTGATGGATCCTAATTGTAGGAAAGCTCTTCAATGCTTGAATCAGTGCAGCCCTGTGGATCAAGTGTGCAACTACAGGTGCATTGCTTCCTATGAAAGTCCAAATCTTGAAGCATTTTCATTATGTGTGCTGCAGAAGAACAACTGTCTCGAGTTGGACGCAAAAGTTCCTGAAAAGCCCTCCGTGTCTCCAATGGAGAAATTTCGAGGTAAGGACATGTGCCACGAAACAGCAGAAGATCTTTTTGTTGGTTGGTTGGGGAAATTGGAGTGGAGTTGGCGAGTGGTAGCCGGGCAAAACCCTGCTTATGATCAATTTCCATGCCAATACCAATTGTTTTACAGGGGAAAAGCGCGAGGATCGTTTTGGTACGAGCCTGTTTTCATGGTGAAAACATTGGAAGGGAAGCTGGTATGGAGGCGGCGAAGATATCGAGTAAAGAGGGGGGAAACTGCAGGGACATTCTTGTTCAGTGTACTGGACAATGGTGTTGTTTCAAATGAGTTTTGGAGCATTGTGGATGTATGTGACGATCTGTCTTGGGGTTTGTTTCACTATAACGGTGCTGCTCGAGCTGCGGGACAGTCGTATACAGGTGCTGTTCTTGTGAGTCCAGATGGTGCTTACCCTGAGAATCCTCATCAAAAAGAGAGAATTGGTGCTGCTTTGGAGAAATGTGGAATTAAAGAGTGGGAACTCTTTGCTGTTGATAATTGCTCATGTACAGATGCTCCTCTTGGAATTCCAGATGGTTCAACTTTGCATTCTGTAATTCAGGTCAAATGAAAATAGTAGAGAGAAACACCAAATATTCTTTTGTGCATGAAAAACTATATGATAATGATATAGTGACCGATTCCAGTACTCGTGACCATGACCAGATAATCAATCGCGCTACCGATCCATTCGAGTTTTTTTTTTTGAATTCTTAGACAATGTATGTTGAATAATTTCTCCCTTAACCTTTTCTATCGATACTATTTTTATGATA
Coding sequence (CDS)
ATGAGCGCCATGTCTATGGAAGCTCAGTTGTTTGTGAATTCCGTAACTAGAATTGGAAGTGGATGGCCTCTGAATCCTCATTTCCTGAGTAATCGGAAAGCCGTTCATTCCGCTACTCTATCGATGCCCAGCCGCCGGCGAACTGTTTCTCGTCGGCGGCTCACCGTGAGTGCGGCGGCGGACAAGATTACGGCGCCGGTGGAAACTCCGGTGAGTATTGTGGCGATTGTTGGTGAAGGAAGCATTAGCCCCTTGAAATCCACTCCATGGGAAGAAGTTATGCTTCATACTGCAAAAAGGCTAAAATGGATCGAAGAAGACTACAAAATGCACGTCTTTGTTGATAGTTTCTGTAATGCAACTCATCAATATTCCGAAAACATTCAAATCATATGCAATGCAGATATTTTGGTTGTTGTTGCTGTCACGAGTAAAGATTCAGTCGTATGGATACAAACAAACTGCAAAAACATCCGAAATATAATCTGCTTTGACTCTGCAACAGATTTAGTTAACAAGTTAGGGGGGTTGTCCTTTCCCAGTGAAACCAAAGGAAATGTGCTGGGGAACATTTTTGGAAATTCTCAGCTGTTGGAGAAAAGAAAGAAATCTGAGGAGGTAGTACAGACCGTATTTGAGGCATGGGATCGTAGTAATTCGGATGATATAAGGTTTTGTTTGTTGGTCATAATCAATGCATATATAAAGCCTGTTCCTATATTGAAGAATCTAAGATCAAAAGGATTTTCAACTTTGAACTGCATGGTTAAAAATTGTGGAAGGCAAATATTGAATTGCTTGATGGATCCTAATTGTAGGAAAGCTCTTCAATGCTTGAATCAGTGCAGCCCTGTGGATCAAGTGTGCAACTACAGGTGCATTGCTTCCTATGAAAGTCCAAATCTTGAAGCATTTTCATTATGTGTGCTGCAGAAGAACAACTGTCTCGAGTTGGACGCAAAAGTTCCTGAAAAGCCCTCCGTGTCTCCAATGGAGAAATTTCGAGGTAAGGACATGTGCCACGAAACAGCAGAAGATCTTTTTGTTGGTTGGTTGGGGAAATTGGAGTGGAGTTGGCGAGTGGTAGCCGGGCAAAACCCTGCTTATGATCAATTTCCATGCCAATACCAATTGTTTTACAGGGGAAAAGCGCGAGGATCGTTTTGGTACGAGCCTGTTTTCATGGTGAAAACATTGGAAGGGAAGCTGGTATGGAGGCGGCGAAGATATCGAGTAAAGAGGGGGGAAACTGCAGGGACATTCTTGTTCAGTGTACTGGACAATGGTGTTGTTTCAAATGAGTTTTGGAGCATTGTGGATGTATGTGACGATCTGTCTTGGGGTTTGTTTCACTATAACGGTGCTGCTCGAGCTGCGGGACAGTCGTATACAGGTGCTGTTCTTGTGAGTCCAGATGGTGCTTACCCTGAGAATCCTCATCAAAAAGAGAGAATTGGTGCTGCTTTGGAGAAATGTGGAATTAAAGAGTGGGAACTCTTTGCTGTTGATAATTGCTCATGTACAGATGCTCCTCTTGGAATTCCAGATGGTTCAACTTTGCATTCTGTAATTCAGGTCAAATGA
Protein sequence
MSAMSMEAQLFVNSVTRIGSGWPLNPHFLSNRKAVHSATLSMPSRRRTVSRRRLTVSAAADKITAPVETPVSIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIEEDYKMHVFVDSFCNATHQYSENIQIICNADILVVVAVTSKDSVVWIQTNCKNIRNIICFDSATDLVNKLGGLSFPSETKGNVLGNIFGNSQLLEKRKKSEEVVQTVFEAWDRSNSDDIRFCLLVIINAYIKPVPILKNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIASYESPNLEAFSLCVLQKNNCLELDAKVPEKPSVSPMEKFRGKDMCHETAEDLFVGWLGKLEWSWRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKLVWRRRRYRVKRGETAGTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVSPDGAYPENPHQKERIGAALEKCGIKEWELFAVDNCSCTDAPLGIPDGSTLHSVIQVK
Homology
BLAST of Sed0027379 vs. NCBI nr
Match:
XP_023532406.1 (violaxanthin de-epoxidase, chloroplastic [Cucurbita pepo subsp. pepo])
HSP 1 Score: 983.4 bits (2541), Expect = 7.6e-283
Identity = 472/529 (89.22%), Postives = 496/529 (93.76%), Query Frame = 0
Query: 3 AMSMEAQLFVNSVTRIGSGWPLNPHFLSNRKAVHSATLSMPSRRRTVSRRRLTVSAA--- 62
++SMEAQ FVNS TR+G+GWPLN HF NRKA HS TLSMPSRRR VSRRRLTV+AA
Sbjct: 8 SVSMEAQWFVNSGTRVGNGWPLNRHFQRNRKAAHSVTLSMPSRRRVVSRRRLTVTAAAVA 67
Query: 63 -ADKITAPVETPVSIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIEEDYKMHVFVDSFC 122
A+K ETPV IVAIVGEGSISPLKSTPWEEVMLHTAKRLKWI+E YKMHVF D FC
Sbjct: 68 EANKSATKAETPVRIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIDESYKMHVFADRFC 127
Query: 123 NATHQYSENIQIICNADILVVVAVTSKDSVVWIQTNCKNIRNIICFDSATDLVNKLGGLS 182
+ATH ++NIQI+CNADILV+VAVTSKDSVVWIQTNCKN++NIICFDSAT+ VNKLGGLS
Sbjct: 128 DATHPDTKNIQIVCNADILVIVAVTSKDSVVWIQTNCKNVQNIICFDSATEFVNKLGGLS 187
Query: 183 FPSETKGNVLGNIFGNSQLLEKRKKSEEVVQTVFEAWDRSNSDDIRFCLLVIINAYIKPV 242
FPSET+ NVLGNIFGNSQ+LEKRKKSEEVVQTVFEAWDR NSDDIRFCLLVIINAYIKPV
Sbjct: 188 FPSETERNVLGNIFGNSQVLEKRKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAYIKPV 247
Query: 243 PILKNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIASYE 302
PILKNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLN+CSPVDQVCNYRCIASYE
Sbjct: 248 PILKNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNKCSPVDQVCNYRCIASYE 307
Query: 303 SPNLEAFSLCVLQKNNCLELDAKVPEKPSVSPMEKFRGKDMCHETAEDLFVGWLGKLEWS 362
SPNLEAFSLCVLQKNNCLELDAKVPEKP VSPMEKFRGKD+CHETAEDLFVGWLG LEWS
Sbjct: 308 SPNLEAFSLCVLQKNNCLELDAKVPEKPYVSPMEKFRGKDLCHETAEDLFVGWLGNLEWS 367
Query: 363 WRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKLVWRRRRYRVKRGETA 422
WRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGK+VWRRRRYRVKRG+TA
Sbjct: 368 WRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKMVWRRRRYRVKRGQTA 427
Query: 423 GTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVSPDGAYPEN 482
GTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHY GAARAAGQSYTGAVLVSPDG+YP+N
Sbjct: 428 GTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYKGAARAAGQSYTGAVLVSPDGSYPQN 487
Query: 483 PHQKERIGAALEKCGIKEWELFAVDNCSCTDAPLGIPDGSTLHSVIQVK 528
HQKER+ AALEKCGIKEWELFAVDNCSC D PLGIPDGSTLHSVIQVK
Sbjct: 488 DHQKERVVAALEKCGIKEWELFAVDNCSCIDPPLGIPDGSTLHSVIQVK 536
BLAST of Sed0027379 vs. NCBI nr
Match:
XP_022948244.1 (violaxanthin de-epoxidase, chloroplastic [Cucurbita moschata])
HSP 1 Score: 977.2 bits (2525), Expect = 5.4e-281
Identity = 468/529 (88.47%), Postives = 495/529 (93.57%), Query Frame = 0
Query: 3 AMSMEAQLFVNSVTRIGSGWPLNPHFLSNRKAVHSATLSMPSRRRTVSRRRLTVSAA--- 62
++SMEAQ FVNS TR+G+GWPLN HF NRKA HS TLSMPSRRR VSRRRLTV+AA
Sbjct: 8 SVSMEAQWFVNSGTRVGNGWPLNRHFQRNRKAAHSVTLSMPSRRRAVSRRRLTVTAAAVA 67
Query: 63 -ADKITAPVETPVSIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIEEDYKMHVFVDSFC 122
A+K + ETPV IVAIVGEGSISPLKSTPWEEV+LHTAKRLKWI+E YKMHVF D FC
Sbjct: 68 EANKSSTKAETPVRIVAIVGEGSISPLKSTPWEEVLLHTAKRLKWIDESYKMHVFADRFC 127
Query: 123 NATHQYSENIQIICNADILVVVAVTSKDSVVWIQTNCKNIRNIICFDSATDLVNKLGGLS 182
+ TH ++NIQI+CNADILV+VAVTS DSVVWIQTNCKN++NIICFDSAT+LVNKLGGLS
Sbjct: 128 DVTHPDTKNIQIVCNADILVIVAVTSNDSVVWIQTNCKNVQNIICFDSATELVNKLGGLS 187
Query: 183 FPSETKGNVLGNIFGNSQLLEKRKKSEEVVQTVFEAWDRSNSDDIRFCLLVIINAYIKPV 242
FPSET+ NVLGNIFGNSQ+LE+RKKSEEVVQTVFEAWDR NSDDIRFCLLVIINAYIKPV
Sbjct: 188 FPSETERNVLGNIFGNSQVLERRKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAYIKPV 247
Query: 243 PILKNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIASYE 302
PILKNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIASYE
Sbjct: 248 PILKNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIASYE 307
Query: 303 SPNLEAFSLCVLQKNNCLELDAKVPEKPSVSPMEKFRGKDMCHETAEDLFVGWLGKLEWS 362
SPNLEAFSLCVLQKNNCLELDAKVPEKP VSPMEKFRGKD+CHETAEDLFVGWLG LEWS
Sbjct: 308 SPNLEAFSLCVLQKNNCLELDAKVPEKPYVSPMEKFRGKDLCHETAEDLFVGWLGNLEWS 367
Query: 363 WRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKLVWRRRRYRVKRGETA 422
WRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGK+VWRRRRYRVKRG+TA
Sbjct: 368 WRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKMVWRRRRYRVKRGQTA 427
Query: 423 GTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVSPDGAYPEN 482
GTFLFSVLDNGVVSNEFWSIVDVC+DLSWGLFHY GAARAAGQSYTGAVLVSPDG+YP+N
Sbjct: 428 GTFLFSVLDNGVVSNEFWSIVDVCEDLSWGLFHYKGAARAAGQSYTGAVLVSPDGSYPQN 487
Query: 483 PHQKERIGAALEKCGIKEWELFAVDNCSCTDAPLGIPDGSTLHSVIQVK 528
HQKER+ AALEKCGIKEWELFAVDNCSC D PLGIPD STLHSVIQVK
Sbjct: 488 DHQKERVVAALEKCGIKEWELFAVDNCSCIDPPLGIPDASTLHSVIQVK 536
BLAST of Sed0027379 vs. NCBI nr
Match:
XP_023007352.1 (violaxanthin de-epoxidase, chloroplastic [Cucurbita maxima])
HSP 1 Score: 976.9 bits (2524), Expect = 7.1e-281
Identity = 470/525 (89.52%), Postives = 490/525 (93.33%), Query Frame = 0
Query: 6 MEAQLFVNSVTRIGSGWPLNPHFLSNRKAVHSATLSMPSRRRTVSRRRLTVSAA----AD 65
MEAQ FVNS TR+G+GWPLN HF N KA HS TLSMPSRRR VSRRRLTV+AA A+
Sbjct: 11 MEAQWFVNSGTRVGNGWPLNRHFQRNPKAAHSVTLSMPSRRRVVSRRRLTVTAAAVAEAN 70
Query: 66 KITAPVETPVSIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIEEDYKMHVFVDSFCNAT 125
K ETPV IVAIVGEGSISPLKSTPWEEVMLHTAKRLKWI+E YKMHVF D FC+ T
Sbjct: 71 KSATKAETPVRIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIDESYKMHVFADRFCDVT 130
Query: 126 HQYSENIQIICNADILVVVAVTSKDSVVWIQTNCKNIRNIICFDSATDLVNKLGGLSFPS 185
H ++NIQI+CNADILV+VAVTSKDSVVWIQTNCKN++NIICFDSAT+LVNKLGGLSFPS
Sbjct: 131 HPDTKNIQIVCNADILVIVAVTSKDSVVWIQTNCKNVQNIICFDSATELVNKLGGLSFPS 190
Query: 186 ETKGNVLGNIFGNSQLLEKRKKSEEVVQTVFEAWDRSNSDDIRFCLLVIINAYIKPVPIL 245
ET+ NVLGNIFGNSQ LEKRKKSEEVVQTVFEAWDR NSDDIRFCLLVIINAYIKPVPIL
Sbjct: 191 ETERNVLGNIFGNSQRLEKRKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAYIKPVPIL 250
Query: 246 KNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIASYESPN 305
KNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIASYESPN
Sbjct: 251 KNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIASYESPN 310
Query: 306 LEAFSLCVLQKNNCLELDAKVPEKPSVSPMEKFRGKDMCHETAEDLFVGWLGKLEWSWRV 365
LEAFSLCVLQKNNCLELDAKVPEKP VSPMEKFRGKD+CHETAEDLFVGWLG LEWSWRV
Sbjct: 311 LEAFSLCVLQKNNCLELDAKVPEKPYVSPMEKFRGKDLCHETAEDLFVGWLGNLEWSWRV 370
Query: 366 VAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKLVWRRRRYRVKRGETAGTF 425
VAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGK+VWRRRRYRVKRG+TAGTF
Sbjct: 371 VAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKMVWRRRRYRVKRGQTAGTF 430
Query: 426 LFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVSPDGAYPENPHQ 485
LFSVLDNGVVSNEFWSIVDVCDDLSWGLFHY GAARAAGQSYTGAVLVSPDG+YP+N HQ
Sbjct: 431 LFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYKGAARAAGQSYTGAVLVSPDGSYPQNDHQ 490
Query: 486 KERIGAALEKCGIKEWELFAVDNCSCTDAPLGIPDGSTLHSVIQV 527
KER+ AALEKCGIKEWELFAVDNCSC D PLGIPDGSTLHSVIQV
Sbjct: 491 KERVVAALEKCGIKEWELFAVDNCSCIDPPLGIPDGSTLHSVIQV 535
BLAST of Sed0027379 vs. NCBI nr
Match:
KAG7035248.1 (Violaxanthin de-epoxidase, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 966.1 bits (2496), Expect = 1.3e-277
Identity = 466/529 (88.09%), Postives = 492/529 (93.01%), Query Frame = 0
Query: 3 AMSMEAQLFVNSVTRIGSGWPLNPHFLSNRKAVHSATLSMPSRRRTVSRRRLTVSAA--- 62
++SMEAQ FVNS TR+G+GWPLN HF NRKA HS TLSMPSRR VSRRRLTV+A
Sbjct: 8 SVSMEAQWFVNSGTRVGNGWPLNRHFQRNRKAAHSVTLSMPSRRPAVSRRRLTVTAVAVA 67
Query: 63 -ADKITAPVETPVSIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIEEDYKMHVFVDSFC 122
A+K ETPV IVAIVGEGSISPLKSTPWEEVMLHTAKRLKWI+E YKMHVF D FC
Sbjct: 68 EANKSATKAETPVRIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIDESYKMHVFADRFC 127
Query: 123 NATHQYSENIQIICNADILVVVAVTSKDSVVWIQTNCKNIRNIICFDSATDLVNKLGGLS 182
+ TH +++IQI+C+ADILV+VAVTS DSVVWIQTNCKN++NIICFDSAT+LVNKLGGLS
Sbjct: 128 D-THPDTKDIQIVCDADILVIVAVTSNDSVVWIQTNCKNVQNIICFDSATELVNKLGGLS 187
Query: 183 FPSETKGNVLGNIFGNSQLLEKRKKSEEVVQTVFEAWDRSNSDDIRFCLLVIINAYIKPV 242
FPSET+ NVLGNIFGNSQ+LEKRKKSEEVVQTVFEAWDR NSDDIRFCLLVIINAYIKPV
Sbjct: 188 FPSETERNVLGNIFGNSQVLEKRKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAYIKPV 247
Query: 243 PILKNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIASYE 302
PILKNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIASYE
Sbjct: 248 PILKNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIASYE 307
Query: 303 SPNLEAFSLCVLQKNNCLELDAKVPEKPSVSPMEKFRGKDMCHETAEDLFVGWLGKLEWS 362
SPNLEAFSLCVLQKNNCLELDA+VPEKP VSPMEKFRGKD+CHETAEDLFVGWLG LEWS
Sbjct: 308 SPNLEAFSLCVLQKNNCLELDAEVPEKPYVSPMEKFRGKDLCHETAEDLFVGWLGNLEWS 367
Query: 363 WRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKLVWRRRRYRVKRGETA 422
WRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGK+VWRRRRYRVKRG+TA
Sbjct: 368 WRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKMVWRRRRYRVKRGQTA 427
Query: 423 GTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVSPDGAYPEN 482
GTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHY GAARAAGQSYTGAVLVSPDG+YP+N
Sbjct: 428 GTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYKGAARAAGQSYTGAVLVSPDGSYPQN 487
Query: 483 PHQKERIGAALEKCGIKEWELFAVDNCSCTDAPLGIPDGSTLHSVIQVK 528
HQKER+ AALEKCGIKEWELFAVDNCSC D PLGIP GSTLHSVIQVK
Sbjct: 488 DHQKERVVAALEKCGIKEWELFAVDNCSCIDPPLGIPGGSTLHSVIQVK 535
BLAST of Sed0027379 vs. NCBI nr
Match:
KAG6605288.1 (S-adenosylmethionine carrier 1, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 963.0 bits (2488), Expect = 1.1e-276
Identity = 464/524 (88.55%), Postives = 488/524 (93.13%), Query Frame = 0
Query: 6 MEAQLFVNSVTRIGSGWPLNPHFLSNRKAVHSATLSMPSRRRTVSRRRLTVSAA----AD 65
MEAQ FVNS TR+G+GWPLN HF NRKA HS TLSMPSRR VSRRRLTV+A A+
Sbjct: 1 MEAQWFVNSGTRVGNGWPLNRHFQRNRKAAHSVTLSMPSRRPAVSRRRLTVTAVAVAEAN 60
Query: 66 KITAPVETPVSIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIEEDYKMHVFVDSFCNAT 125
K ETPV IVAIVGEGSISPLKSTPWEEVMLHTAKRLKWI+E YKMHVF D FC+ T
Sbjct: 61 KSATKAETPVRIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIDESYKMHVFADRFCD-T 120
Query: 126 HQYSENIQIICNADILVVVAVTSKDSVVWIQTNCKNIRNIICFDSATDLVNKLGGLSFPS 185
H +++IQI+C+ADILV+VAVTS DSVVWIQTNCKN++NIICFDSAT+LVNKLGGLSFPS
Sbjct: 121 HPDTKDIQIVCDADILVIVAVTSNDSVVWIQTNCKNVQNIICFDSATELVNKLGGLSFPS 180
Query: 186 ETKGNVLGNIFGNSQLLEKRKKSEEVVQTVFEAWDRSNSDDIRFCLLVIINAYIKPVPIL 245
ET+ NVLGNIFGNSQ+LEKRKKSEEVVQTVFEAWDR NSDDIRFCLLVIINAYIKPVPIL
Sbjct: 181 ETERNVLGNIFGNSQVLEKRKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAYIKPVPIL 240
Query: 246 KNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIASYESPN 305
KNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIASYESPN
Sbjct: 241 KNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIASYESPN 300
Query: 306 LEAFSLCVLQKNNCLELDAKVPEKPSVSPMEKFRGKDMCHETAEDLFVGWLGKLEWSWRV 365
LEAFSLCVLQKNNCLELDA+VPEKP VSPMEKFRGKD+CHETAEDLFVGWLG LEWSWRV
Sbjct: 301 LEAFSLCVLQKNNCLELDAEVPEKPYVSPMEKFRGKDLCHETAEDLFVGWLGNLEWSWRV 360
Query: 366 VAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKLVWRRRRYRVKRGETAGTF 425
VAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGK+VWRRRRYRVKRG+TAGTF
Sbjct: 361 VAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKMVWRRRRYRVKRGQTAGTF 420
Query: 426 LFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVSPDGAYPENPHQ 485
LFSVLDNGVVSNEFWSIVDVCDDLSWGLFHY GAARAAGQSYTGAVLVSPDG+YP+N HQ
Sbjct: 421 LFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYKGAARAAGQSYTGAVLVSPDGSYPQNDHQ 480
Query: 486 KERIGAALEKCGIKEWELFAVDNCSCTDAPLGIPDGSTLHSVIQ 526
KER+ AALEKCGIKEWELFAVDNCSC D PLGIPDGSTLHSVIQ
Sbjct: 481 KERVVAALEKCGIKEWELFAVDNCSCIDPPLGIPDGSTLHSVIQ 523
BLAST of Sed0027379 vs. ExPASy TrEMBL
Match:
A0A6J1G9B9 (violaxanthin de-epoxidase, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111451875 PE=4 SV=1)
HSP 1 Score: 977.2 bits (2525), Expect = 2.6e-281
Identity = 468/529 (88.47%), Postives = 495/529 (93.57%), Query Frame = 0
Query: 3 AMSMEAQLFVNSVTRIGSGWPLNPHFLSNRKAVHSATLSMPSRRRTVSRRRLTVSAA--- 62
++SMEAQ FVNS TR+G+GWPLN HF NRKA HS TLSMPSRRR VSRRRLTV+AA
Sbjct: 8 SVSMEAQWFVNSGTRVGNGWPLNRHFQRNRKAAHSVTLSMPSRRRAVSRRRLTVTAAAVA 67
Query: 63 -ADKITAPVETPVSIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIEEDYKMHVFVDSFC 122
A+K + ETPV IVAIVGEGSISPLKSTPWEEV+LHTAKRLKWI+E YKMHVF D FC
Sbjct: 68 EANKSSTKAETPVRIVAIVGEGSISPLKSTPWEEVLLHTAKRLKWIDESYKMHVFADRFC 127
Query: 123 NATHQYSENIQIICNADILVVVAVTSKDSVVWIQTNCKNIRNIICFDSATDLVNKLGGLS 182
+ TH ++NIQI+CNADILV+VAVTS DSVVWIQTNCKN++NIICFDSAT+LVNKLGGLS
Sbjct: 128 DVTHPDTKNIQIVCNADILVIVAVTSNDSVVWIQTNCKNVQNIICFDSATELVNKLGGLS 187
Query: 183 FPSETKGNVLGNIFGNSQLLEKRKKSEEVVQTVFEAWDRSNSDDIRFCLLVIINAYIKPV 242
FPSET+ NVLGNIFGNSQ+LE+RKKSEEVVQTVFEAWDR NSDDIRFCLLVIINAYIKPV
Sbjct: 188 FPSETERNVLGNIFGNSQVLERRKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAYIKPV 247
Query: 243 PILKNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIASYE 302
PILKNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIASYE
Sbjct: 248 PILKNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIASYE 307
Query: 303 SPNLEAFSLCVLQKNNCLELDAKVPEKPSVSPMEKFRGKDMCHETAEDLFVGWLGKLEWS 362
SPNLEAFSLCVLQKNNCLELDAKVPEKP VSPMEKFRGKD+CHETAEDLFVGWLG LEWS
Sbjct: 308 SPNLEAFSLCVLQKNNCLELDAKVPEKPYVSPMEKFRGKDLCHETAEDLFVGWLGNLEWS 367
Query: 363 WRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKLVWRRRRYRVKRGETA 422
WRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGK+VWRRRRYRVKRG+TA
Sbjct: 368 WRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKMVWRRRRYRVKRGQTA 427
Query: 423 GTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVSPDGAYPEN 482
GTFLFSVLDNGVVSNEFWSIVDVC+DLSWGLFHY GAARAAGQSYTGAVLVSPDG+YP+N
Sbjct: 428 GTFLFSVLDNGVVSNEFWSIVDVCEDLSWGLFHYKGAARAAGQSYTGAVLVSPDGSYPQN 487
Query: 483 PHQKERIGAALEKCGIKEWELFAVDNCSCTDAPLGIPDGSTLHSVIQVK 528
HQKER+ AALEKCGIKEWELFAVDNCSC D PLGIPD STLHSVIQVK
Sbjct: 488 DHQKERVVAALEKCGIKEWELFAVDNCSCIDPPLGIPDASTLHSVIQVK 536
BLAST of Sed0027379 vs. ExPASy TrEMBL
Match:
A0A6J1KYG1 (violaxanthin de-epoxidase, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111499873 PE=4 SV=1)
HSP 1 Score: 976.9 bits (2524), Expect = 3.4e-281
Identity = 470/525 (89.52%), Postives = 490/525 (93.33%), Query Frame = 0
Query: 6 MEAQLFVNSVTRIGSGWPLNPHFLSNRKAVHSATLSMPSRRRTVSRRRLTVSAA----AD 65
MEAQ FVNS TR+G+GWPLN HF N KA HS TLSMPSRRR VSRRRLTV+AA A+
Sbjct: 11 MEAQWFVNSGTRVGNGWPLNRHFQRNPKAAHSVTLSMPSRRRVVSRRRLTVTAAAVAEAN 70
Query: 66 KITAPVETPVSIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIEEDYKMHVFVDSFCNAT 125
K ETPV IVAIVGEGSISPLKSTPWEEVMLHTAKRLKWI+E YKMHVF D FC+ T
Sbjct: 71 KSATKAETPVRIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIDESYKMHVFADRFCDVT 130
Query: 126 HQYSENIQIICNADILVVVAVTSKDSVVWIQTNCKNIRNIICFDSATDLVNKLGGLSFPS 185
H ++NIQI+CNADILV+VAVTSKDSVVWIQTNCKN++NIICFDSAT+LVNKLGGLSFPS
Sbjct: 131 HPDTKNIQIVCNADILVIVAVTSKDSVVWIQTNCKNVQNIICFDSATELVNKLGGLSFPS 190
Query: 186 ETKGNVLGNIFGNSQLLEKRKKSEEVVQTVFEAWDRSNSDDIRFCLLVIINAYIKPVPIL 245
ET+ NVLGNIFGNSQ LEKRKKSEEVVQTVFEAWDR NSDDIRFCLLVIINAYIKPVPIL
Sbjct: 191 ETERNVLGNIFGNSQRLEKRKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAYIKPVPIL 250
Query: 246 KNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIASYESPN 305
KNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIASYESPN
Sbjct: 251 KNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIASYESPN 310
Query: 306 LEAFSLCVLQKNNCLELDAKVPEKPSVSPMEKFRGKDMCHETAEDLFVGWLGKLEWSWRV 365
LEAFSLCVLQKNNCLELDAKVPEKP VSPMEKFRGKD+CHETAEDLFVGWLG LEWSWRV
Sbjct: 311 LEAFSLCVLQKNNCLELDAKVPEKPYVSPMEKFRGKDLCHETAEDLFVGWLGNLEWSWRV 370
Query: 366 VAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKLVWRRRRYRVKRGETAGTF 425
VAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGK+VWRRRRYRVKRG+TAGTF
Sbjct: 371 VAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKMVWRRRRYRVKRGQTAGTF 430
Query: 426 LFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVSPDGAYPENPHQ 485
LFSVLDNGVVSNEFWSIVDVCDDLSWGLFHY GAARAAGQSYTGAVLVSPDG+YP+N HQ
Sbjct: 431 LFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYKGAARAAGQSYTGAVLVSPDGSYPQNDHQ 490
Query: 486 KERIGAALEKCGIKEWELFAVDNCSCTDAPLGIPDGSTLHSVIQV 527
KER+ AALEKCGIKEWELFAVDNCSC D PLGIPDGSTLHSVIQV
Sbjct: 491 KERVVAALEKCGIKEWELFAVDNCSCIDPPLGIPDGSTLHSVIQV 535
BLAST of Sed0027379 vs. ExPASy TrEMBL
Match:
A0A0A0LQ45 (VDE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G297200 PE=4 SV=1)
HSP 1 Score: 913.3 bits (2359), Expect = 4.7e-262
Identity = 445/531 (83.80%), Postives = 476/531 (89.64%), Query Frame = 0
Query: 4 MSMEAQLFVNSVTRIGSGWPLNPH---FLSNRKAVHSATLSMPSRRRTVSRRRLTVS--- 63
M +E NS T IG+GWPLNPH FLS+RK + TLSMPS R TVSRR LTV
Sbjct: 1 MKVELNFNFNSGTSIGNGWPLNPHFHFFLSHRKPTYFPTLSMPSHRPTVSRRLLTVPPPV 60
Query: 64 -AAADKITAPVETPVSIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIEEDYKMHVFVDS 123
A A+K A +TPV IVAIVGEGSISPLKSTPWEEVMLHTAKRLKW++E Y+MHVF D+
Sbjct: 61 VAEANKNMAMADTPVRIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWVDECYEMHVFADN 120
Query: 124 FCNATHQYSENIQIICNADILVVVAVTSKDSVVWIQTNCKNIRNIICFDSATDLVNKLGG 183
CN T Q +E IQIIC ADILVVVAVT+KDSV+WI+ NC+NI+NIICF+SA +LVNKLGG
Sbjct: 121 VCNVTRQDTETIQIICEADILVVVAVTTKDSVLWIRLNCENIQNIICFESAAELVNKLGG 180
Query: 184 LSFPSETKGNVLGNIFGNSQLLEKRKKSEEVVQTVFEAWDRSNSDDIRFCLLVIINAYIK 243
+SF SETKGN+L N FGNSQL+EKRKKSEEVVQTVFEAWDR NSDDIRFCLLVIINAYIK
Sbjct: 181 ISFLSETKGNLLENFFGNSQLMEKRKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAYIK 240
Query: 244 PVPILKNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIAS 303
PVPILKNLRSKGFSTLNCMVKNCGRQILNCLMD NCRKALQCLNQCSPVDQVCNYRCIAS
Sbjct: 241 PVPILKNLRSKGFSTLNCMVKNCGRQILNCLMDANCRKALQCLNQCSPVDQVCNYRCIAS 300
Query: 304 YESPNLEAFSLCVLQKNNCLELDAKVPEKPSVSPMEKFRGKDMCHETAEDLFVGWLGKLE 363
YESPNLEAFSLCVLQK+NCL+LDAKVPEKP V P+E+FRGK++CHETAEDLF+GWLG LE
Sbjct: 301 YESPNLEAFSLCVLQKHNCLDLDAKVPEKPYVPPIERFRGKEICHETAEDLFIGWLGSLE 360
Query: 364 WSWRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKLVWRRRRYRVKRGE 423
WSWRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKLVWRRRRYRVKRG+
Sbjct: 361 WSWRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKLVWRRRRYRVKRGK 420
Query: 424 TAGTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVSPDGAYP 483
AGTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVS DG YP
Sbjct: 421 IAGTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVSRDGKYP 480
Query: 484 ENPHQKERIGAALEKCGIKEWELFAVDNCSCTDAPLGIPDGSTLHSVIQVK 528
EN HQKERI AALEKCGIKEWELFAVDN SC D PLGIPDGSTLH+VI+VK
Sbjct: 481 ENDHQKERIVAALEKCGIKEWELFAVDNSSCLDPPLGIPDGSTLHNVIEVK 531
BLAST of Sed0027379 vs. ExPASy TrEMBL
Match:
A0A1S3C790 (violaxanthin de-epoxidase, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103497481 PE=4 SV=1)
HSP 1 Score: 910.2 bits (2351), Expect = 4.0e-261
Identity = 440/529 (83.18%), Postives = 477/529 (90.17%), Query Frame = 0
Query: 6 MEAQLFVNSVTRIGSGWPLNPH---FLSNRKAVHSATLSMPSRRRTVSRRRLTVS----A 65
M+ +L++NS T IG+GWPLNP+ FLS+RK HS TLSMPS R TVSRR LTV A
Sbjct: 1 MKVELYLNSGTSIGNGWPLNPNFHFFLSHRKPTHSPTLSMPSHRPTVSRRLLTVPPPVVA 60
Query: 66 AADKITAPVETPVSIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIEEDYKMHVFVDSFC 125
A+K A +TPV IVAIVGEGSISPLKSTPWEEVMLHTAKRLKW++ Y+MHVF D+ C
Sbjct: 61 EANKNVAMTDTPVRIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWVDGGYEMHVFADNVC 120
Query: 126 NATHQYSENIQIICNADILVVVAVTSKDSVVWIQTNCKNIRNIICFDSATDLVNKLGGLS 185
N T Q + IQIIC ADILVVVAVTS+DSV+WI+ NC+NI+NIICF+SA +LVNKLGG+S
Sbjct: 121 NVTRQDTGTIQIICEADILVVVAVTSQDSVLWIRMNCENIQNIICFESAAELVNKLGGIS 180
Query: 186 FPSETKGNVLGNIFGNSQLLEKRKKSEEVVQTVFEAWDRSNSDDIRFCLLVIINAYIKPV 245
FPSETKGN+L + FGNSQLLEKRKKSEEVVQTVFEAWDR NSDDIRFCLLVIINAYIKPV
Sbjct: 181 FPSETKGNLLESFFGNSQLLEKRKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAYIKPV 240
Query: 246 PILKNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIASYE 305
PIL+NLRSKGFSTLNCMVKNCGRQILNCLMD NCRKALQCLNQCSPVDQVCNYRCIASYE
Sbjct: 241 PILQNLRSKGFSTLNCMVKNCGRQILNCLMDANCRKALQCLNQCSPVDQVCNYRCIASYE 300
Query: 306 SPNLEAFSLCVLQKNNCLELDAKVPEKPSVSPMEKFRGKDMCHETAEDLFVGWLGKLEWS 365
SPNLEAFSLCVLQK+NCL+LDAK+PEKP V P+E+FRGK++CHE AEDLF+GWLG LEWS
Sbjct: 301 SPNLEAFSLCVLQKHNCLDLDAKIPEKPYVPPIERFRGKELCHEMAEDLFIGWLGSLEWS 360
Query: 366 WRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKLVWRRRRYRVKRGETA 425
WRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGK+VWRRRRYRVKRG+ A
Sbjct: 361 WRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKMVWRRRRYRVKRGKIA 420
Query: 426 GTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVSPDGAYPEN 485
GTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVS DG YPEN
Sbjct: 421 GTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVSRDGKYPEN 480
Query: 486 PHQKERIGAALEKCGIKEWELFAVDNCSCTDAPLGIPDGSTLHSVIQVK 528
HQKERI AALEKCGIK+WELFAVDN SC D PLGIPDGSTLH VI+VK
Sbjct: 481 DHQKERIVAALEKCGIKDWELFAVDNSSCLDPPLGIPDGSTLHYVIEVK 529
BLAST of Sed0027379 vs. ExPASy TrEMBL
Match:
A0A6B7FH27 (Violaxanthin de-epoxidase-related protein OS=Cucumis sativus OX=3659 PE=2 SV=1)
HSP 1 Score: 909.1 bits (2348), Expect = 8.8e-261
Identity = 444/531 (83.62%), Postives = 475/531 (89.45%), Query Frame = 0
Query: 4 MSMEAQLFVNSVTRIGSGWPLNPH---FLSNRKAVHSATLSMPSRRRTVSRRRLTVS--- 63
M +E NS T IG+GWPLNPH FLS+RK + TLSMPS R TVSRR LTV
Sbjct: 1 MKVELNFNFNSGTSIGNGWPLNPHFHFFLSHRKPTYFPTLSMPSHRPTVSRRLLTVPPPV 60
Query: 64 -AAADKITAPVETPVSIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWIEEDYKMHVFVDS 123
A A+K A +TPV IVAIVGEGSISPLKSTPWEEVMLHTAKRLKW++E Y+MHVF D+
Sbjct: 61 VAEANKNMAMADTPVRIVAIVGEGSISPLKSTPWEEVMLHTAKRLKWVDECYEMHVFADN 120
Query: 124 FCNATHQYSENIQIICNADILVVVAVTSKDSVVWIQTNCKNIRNIICFDSATDLVNKLGG 183
CN T Q +E IQIIC ADILVVVAVT+KDSV+WI+ NC+NI+NIICF+SA +LVNKLGG
Sbjct: 121 VCNVTRQDTETIQIICEADILVVVAVTTKDSVLWIRLNCENIQNIICFESAAELVNKLGG 180
Query: 184 LSFPSETKGNVLGNIFGNSQLLEKRKKSEEVVQTVFEAWDRSNSDDIRFCLLVIINAYIK 243
+SF SETKGN+L N FGNSQL+EKRKKSEEVVQTVFEAWDR NSDDIRFCLLVIINAYIK
Sbjct: 181 ISFLSETKGNLLENFFGNSQLMEKRKKSEEVVQTVFEAWDRRNSDDIRFCLLVIINAYIK 240
Query: 244 PVPILKNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQCSPVDQVCNYRCIAS 303
PVPILKNLRSKGFSTLNCMVKNCGRQILNCLMD NCRKALQCLNQCSPVDQVCNYRCIAS
Sbjct: 241 PVPILKNLRSKGFSTLNCMVKNCGRQILNCLMDANCRKALQCLNQCSPVDQVCNYRCIAS 300
Query: 304 YESPNLEAFSLCVLQKNNCLELDAKVPEKPSVSPMEKFRGKDMCHETAEDLFVGWLGKLE 363
YESPNLEAFSLCVLQK+NCL+LDAKVPEKP V P+E+FRGK++CHETAEDLF+GWLG LE
Sbjct: 301 YESPNLEAFSLCVLQKHNCLDLDAKVPEKPYVPPIERFRGKEICHETAEDLFIGWLGSLE 360
Query: 364 WSWRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKLVWRRRRYRVKRGE 423
WSWRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKLVWRRRRYRVKRG+
Sbjct: 361 WSWRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGKLVWRRRRYRVKRGK 420
Query: 424 TAGTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVSPDGAYP 483
AGTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVS DG YP
Sbjct: 421 IAGTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQSYTGAVLVSRDGKYP 480
Query: 484 ENPHQKERIGAALEKCGIKEWELFAVDNCSCTDAPLGIPDGSTLHSVIQVK 528
EN QKERI AALEKCGIKEWELFAVDN SC D PLGIPDGSTLH+VI+VK
Sbjct: 481 ENDLQKERIVAALEKCGIKEWELFAVDNSSCLDPPLGIPDGSTLHNVIEVK 531
BLAST of Sed0027379 vs. TAIR 10
Match:
AT2G21860.1 (violaxanthin de-epoxidase-related )
HSP 1 Score: 688.7 bits (1776), Expect = 3.6e-198
Identity = 334/484 (69.01%), Postives = 390/484 (80.58%), Query Frame = 0
Query: 44 SRRRTVSRRRLTVSAAADKITAPVETPVSIVAIVGEGSISPLKSTPWEEVMLHTAKRLKW 103
SRR + R+ + + KI P E PV ++A+VG+G +SPLKST WEEVMLHTA+RLKW
Sbjct: 46 SRRGRTTVVRVLETEKSTKIEKP-EPPVKLIALVGKGEVSPLKSTSWEEVMLHTARRLKW 105
Query: 104 IEEDYKMHVFVDSFCNATHQYSENI-QIICNADILVVVAVTSKDSVVWIQTNCKNIRNII 163
++E Y+M VF D ++ Q + N+ Q + DILVVVAV + +SV WIQTN KN++N+I
Sbjct: 106 VDEGYEMLVFDDEIVSSNDQRAMNLTQELNQTDILVVVAVNNSESVNWIQTNSKNVKNMI 165
Query: 164 CFDSATDLVNKLGGLSFPSETKGNVLGNIFGNSQLLEKRKKSEEVVQTVFEAWDRSNSDD 223
CF+S+ +L+N+LGG S + K K+ EVV+TV +AW+R NSDD
Sbjct: 166 CFESSPNLMNRLGGTDVGS----------------VNKDKEVTEVVKTVGDAWERRNSDD 225
Query: 224 IRFCLLVIINAYIKPVPILKNLRSKGFSTLNCMVKNCGRQILNCLMDPNCRKALQCLNQC 283
IRFCLLVIINAYI+PVP+L+NLRSKGFSTL+CMVKNCG QILNCL+DPNCRKALQCLNQC
Sbjct: 226 IRFCLLVIINAYIRPVPVLQNLRSKGFSTLSCMVKNCGPQILNCLLDPNCRKALQCLNQC 285
Query: 284 SPVDQVCNYRCIASYESPNLEAFSLCVLQKNNCLELDAKVPEKPSVSPMEKFRGKDMCHE 343
SPVDQVC+YRCIASYE P EAFSLCVLQK+NCLELDAK+PEKP V PM FRGK++CH+
Sbjct: 286 SPVDQVCSYRCIASYEGPYFEAFSLCVLQKHNCLELDAKIPEKPYVPPMTSFRGKELCHD 345
Query: 344 TAEDLFVGWLGKLEWSWRVVAGQNPAYDQFPCQYQLFYRGKARGSFWYEPVFMVKTLEGK 403
TAEDLFVGWLG+LEWSWRVVAGQNPAYDQFPCQYQLFYRGK + SFWYEPVF V+TLE K
Sbjct: 346 TAEDLFVGWLGELEWSWRVVAGQNPAYDQFPCQYQLFYRGKGKSSFWYEPVFQVRTLEEK 405
Query: 404 LVWRRRRYRVKRGETAGTFLFSVLDNGVVSNEFWSIVDVCDDLSWGLFHYNGAARAAGQS 463
LVWRRRRY VKRG+ TF FSVLDNGVVSNEFW+IVDV DDLSWGLFHY+GAAR AGQS
Sbjct: 406 LVWRRRRYSVKRGKIPATFRFSVLDNGVVSNEFWTIVDVSDDLSWGLFHYHGAARVAGQS 465
Query: 464 YTGAVLVSPDGAYPENPHQKERIGAALEKCGIKEWELFAVDNCSCTDAPLGIPDGSTLHS 523
YTGAVLV+PDG+YP KER+ +ALEKCGIKEWELFAVDNCSC + PLGIP GS LHS
Sbjct: 466 YTGAVLVTPDGSYPAE-KDKERLQSALEKCGIKEWELFAVDNCSCENPPLGIPQGSRLHS 511
Query: 524 VIQV 527
I +
Sbjct: 526 RISI 511
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_023532406.1 | 7.6e-283 | 89.22 | violaxanthin de-epoxidase, chloroplastic [Cucurbita pepo subsp. pepo] | [more] |
XP_022948244.1 | 5.4e-281 | 88.47 | violaxanthin de-epoxidase, chloroplastic [Cucurbita moschata] | [more] |
XP_023007352.1 | 7.1e-281 | 89.52 | violaxanthin de-epoxidase, chloroplastic [Cucurbita maxima] | [more] |
KAG7035248.1 | 1.3e-277 | 88.09 | Violaxanthin de-epoxidase, chloroplastic [Cucurbita argyrosperma subsp. argyrosp... | [more] |
KAG6605288.1 | 1.1e-276 | 88.55 | S-adenosylmethionine carrier 1, chloroplastic/mitochondrial, partial [Cucurbita ... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1G9B9 | 2.6e-281 | 88.47 | violaxanthin de-epoxidase, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111... | [more] |
A0A6J1KYG1 | 3.4e-281 | 89.52 | violaxanthin de-epoxidase, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11149... | [more] |
A0A0A0LQ45 | 4.7e-262 | 83.80 | VDE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G297200 PE=4 SV... | [more] |
A0A1S3C790 | 4.0e-261 | 83.18 | violaxanthin de-epoxidase, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC1034... | [more] |
A0A6B7FH27 | 8.8e-261 | 83.62 | Violaxanthin de-epoxidase-related protein OS=Cucumis sativus OX=3659 PE=2 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT2G21860.1 | 3.6e-198 | 69.01 | violaxanthin de-epoxidase-related | [more] |