Sed0027352 (gene) Chayote v1

Overview


Name	Sed0027352
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Ribosomal protein L19
Location	LG05: 39108623 .. 39111144 (+)
RNA-Seq Expression	Sed0027352
Synteny	Sed0027352

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGTCTCTGGAATTGCAGCAGCTCGAAGAAGGCTCTGAAAAATGGTCTCCCTCAAGCTCCAGAAGCGGCTCGCCGCCAGTGTTCTAAAGTGCGGCAAAGGCAAGGTCTGGTTGGATCCTAATGAAGTCAACGAAATCTCCATGGCCAATTCTCGTAAGTTTCTCGTATTTTCATCGATTCCGTATTTTGGGAGTTCTTGGTTTTCAATTTGATATTCTTGTTTATAGATTGCTTTTGTTTGCTGGAGATATCGTAAGGGGCTTGTTATTTATTTAATTCGAATGGTTTCCGTATGCTGTCAAGTGATATGCTCGATTGGGACTCGATTCGTTAAAAGGGGATTTTGATTTGAACTTTATTGGTTTGGTAAAATTATTGAGCGTCGAATATATGGTATTTGAGGTTACCTTAGCTTATTTTTAGTAATTTTTGCTGAGTGATGTAGTATAAATTGTTTAAATGTGAAATATTGTTAATTTTTTTTAGTGTATGTACTATGGTTTGGTCGATTGAAGATGTTGGTTTTGTTGATTGCAGGCCAAAACATTAGGAAGTTGGTTAAAGATGGATTTGTCATCAGGAAACCGACCAAGATTCACTCTCGTTCCCGTGCTCGTAGAATGAAGGAAGCGAAAAGGAAGGGACGTCATTCAGGATATGGTATCTTCCCTTGATTTCTGATATTTGTTATTGGTAAAAAGGGTGTTCTGTTTTTGCACAGTTCTGGTCTTGTGTGCAGGCACAGCCTCTCTGTTAAGTGATTCAGCAGTTGTTTTAAGCTCTTCAATGTAGAGAAATATCGAGCTTGCATTATGCTAATTGAGCATGATTATGAAAAAGTAAATGTGTAGCTTTACATCCTGAAAGAGCAGGGTGCATAGAATCATTAGATTTTACTTGATAAATTAGTCCAATAAAAAAGTTGATGGCATGGTTAATGTTCTGTTATATTTTTCATTAGACTTATTTATGTTGGGCAGCCGTCAATTGTTTTTTCCTTCAGTAAATTTAATTTGCTAATTGATATTTGAGTTATATCTCATCTAGGAACTGAATACCATCGTCTTGTTCCAAATTTTAAACAGCATAGAATTATCATGCTTAGCATTCGAGTTCGTTGAGAATGGAGCATTAGTTGAGTCTATGTATGTGTGTGACACGTTTATTCGTTTATGTAATAGTAACAGTGATGTTTTTTTTTGCACTCTCTTACACTTTATAGGCATCATCTATATTATGAGTAATTATTTATTTCATCTATTTCTTAATGGAATTCCATTTTTTACTAAAAAAAATTTAGTTATAAATCATATTGGCCACCTAATTATGAACTAAGTTCCCAGTGGTTTCCTTGGTGCACATGTAGTATGGTCAAACAACTGTCTTCCCGATAGATAGTTGATGTTTATAAACTGGCACGAACACTTGCGGATCTCATATAATGTTTTGCAAGTAATGAAGCAAGAAGGGCTAGCATGCCATCTATATCTATACCCTGTCTTTCTCTAGAGTAGTGTTTTAATTTCTACTTTGTCGCTAATTGTGTTTATCGTATTTAGGTAAGCGTAAGGGTACCAGGGAGGCGAGATTGCCCACCAAGATCCTCTGGATGCGGAGGATGCGTGTCCTTAGGAGATTACTCCGCAAGTACAGGGAGTCCAAGAAGATTGACAAGCACATGTACCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTTATGGAGAGCATCCACAAATCAAAGGCTGAGAAGGCAAGAGAGAAGACGCTGTCCGACCAATTTGAGGCGAAGAGAGCCAAGAACAAGGCCAGTAGGGAAAGGAAGTTTGCCAGAAGAGAGGAACGGTTGGCACAGGTATCCGATCAATTCATCTGTATAATTAAAAATTGTTCATTAATACTTATCAGAAGCTTGACAACCTAGAATTTCTATATCATCTTGAATCCACTGCCCCATTTGTGGACTTTAACTTTATTAGCATTTACGCTCCCATGTCAAAATATTGACTATATTGTCATTTTAGGGACCTGGAGAAAAACCAGTCGCCGCTGCTGCCCCAGTTGCTGCACCTCAAGCCGCTCAGTGAGTATTTAATAGTTTTGTATATCTATATGTAAATTTGATTATAGCTGATGTACATAGAGAACCTAATCTTATAATTCTTTCAGGGTATCAAAAAAAGCAAAGAAGTGAAGTGTTCTCATTGTTGGTAGATCCTCAACCACTGTTCTGGTTTTGACCCCTTTTGTCGTATTTATTTTCCTGTTTGTTTTGGACAATTTTCCTTGTTATCAAGATCCCAGACGAATAGAGATTTACAATCGATAATTTTTCTAATTTATCAACCATTCCATGTTTGGGTTCTTTTTATTTAACTTTTATCTAGATTATTCTTACAAGCCTTGTTGTACAACTATTTCACATGAGTTTTTCTGAGTAAACTATGTATGGGTTGTCTGAATTCCACCTTCATGAAATTAACCACCTGATTAAGTTTTGATAA

mRNA sequence

CAGTCTCTGGAATTGCAGCAGCTCGAAGAAGGCTCTGAAAAATGGTCTCCCTCAAGCTCCAGAAGCGGCTCGCCGCCAGTGTTCTAAAGTGCGGCAAAGGCAAGGTCTGGTTGGATCCTAATGAAGTCAACGAAATCTCCATGGCCAATTCTCGCCAAAACATTAGGAAGTTGGTTAAAGATGGATTTGTCATCAGGAAACCGACCAAGATTCACTCTCGTTCCCGTGCTCGTAGAATGAAGGAAGCGAAAAGGAAGGGACGTCATTCAGGATATGGTAAGCGTAAGGGTACCAGGGAGGCGAGATTGCCCACCAAGATCCTCTGGATGCGGAGGATGCGTGTCCTTAGGAGATTACTCCGCAAGTACAGGGAGTCCAAGAAGATTGACAAGCACATGTACCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTTATGGAGAGCATCCACAAATCAAAGGCTGAGAAGGCAAGAGAGAAGACGCTGTCCGACCAATTTGAGGCGAAGAGAGCCAAGAACAAGGCCAGTAGGGAAAGGAAGTTTGCCAGAAGAGAGGAACGGTTGGCACAGGGACCTGGAGAAAAACCAGTCGCCGCTGCTGCCCCAGTTGCTGCACCTCAAGCCGCTCAGGTATCAAAAAAAGCAAAGAAGTGAAGTGTTCTCATTGTTGGTAGATCCTCAACCACTGTTCTGGTTTTGACCCCTTTTGTCGTATTTATTTTCCTGTTTGTTTTGGACAATTTTCCTTGTTATCAAGATCCCAGACGAATAGAGATTTACAATCGATAATTTTTCTAATTTATCAACCATTCCATGTTTGGGTTCTTTTTATTTAACTTTTATCTAGATTATTCTTACAAGCCTTGTTGTACAACTATTTCACATGAGTTTTTCTGAGTAAACTATGTATGGGTTGTCTGAATTCCACCTTCATGAAATTAACCACCTGATTAAGTTTTGATAA

Coding sequence (CDS)

ATGGTCTCCCTCAAGCTCCAGAAGCGGCTCGCCGCCAGTGTTCTAAAGTGCGGCAAAGGCAAGGTCTGGTTGGATCCTAATGAAGTCAACGAAATCTCCATGGCCAATTCTCGCCAAAACATTAGGAAGTTGGTTAAAGATGGATTTGTCATCAGGAAACCGACCAAGATTCACTCTCGTTCCCGTGCTCGTAGAATGAAGGAAGCGAAAAGGAAGGGACGTCATTCAGGATATGGTAAGCGTAAGGGTACCAGGGAGGCGAGATTGCCCACCAAGATCCTCTGGATGCGGAGGATGCGTGTCCTTAGGAGATTACTCCGCAAGTACAGGGAGTCCAAGAAGATTGACAAGCACATGTACCATGACATGTACATGAAGGTGAAGGGTAATGTTTTCAAGAACAAGCGTGTGCTTATGGAGAGCATCCACAAATCAAAGGCTGAGAAGGCAAGAGAGAAGACGCTGTCCGACCAATTTGAGGCGAAGAGAGCCAAGAACAAGGCCAGTAGGGAAAGGAAGTTTGCCAGAAGAGAGGAACGGTTGGCACAGGGACCTGGAGAAAAACCAGTCGCCGCTGCTGCCCCAGTTGCTGCACCTCAAGCCGCTCAGGTATCAAAAAAAGCAAAGAAGTGA

Protein sequence

MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFVIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREERLAQGPGEKPVAAAAPVAAPQAAQVSKKAKK

Homology

[Close]

BLAST of Sed0027352 vs. NCBI nr
Match: XP_022155266.1 (60S ribosomal protein L19-1 [Momordica charantia])

HSP 1 Score: 371.3 bits (952), Expect = 5.4e-99
Identity = 203/210 (96.67%), Postives = 205/210 (97.62%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFVIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCG+GKVWLDPNEVNEISMANSRQNIRKLVKDGF+IRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180

Query: 181 LAQGPGEKPVAAAAPVAAPQAAQVSKKAKK 211
           LAQGPGEKP AAAAP AA QA QVSKKAKK
Sbjct: 181 LAQGPGEKPAAAAAPAAASQATQVSKKAKK 210

[Close]

BLAST of Sed0027352 vs. NCBI nr
Match: XP_022934250.1 (60S ribosomal protein L19-1-like [Cucurbita moschata] >KAG6581284.1 60S ribosomal protein L19-2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018007.1 60S ribosomal protein L19-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 368.2 bits (944), Expect = 4.6e-98
Identity = 203/210 (96.67%), Postives = 206/210 (98.10%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFVIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCG+GKVWLDPNEVNEISMANSRQN+RKLVKDGF+IRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180

Query: 181 LAQGPGEKPVAAAAPVAAPQAAQVSKKAKK 211
           LAQGPGEKP AAAAPVAA Q  QVSKKAKK
Sbjct: 181 LAQGPGEKP-AAAAPVAASQPTQVSKKAKK 209

[Close]

BLAST of Sed0027352 vs. NCBI nr
Match: XP_004152239.1 (60S ribosomal protein L19-1 [Cucumis sativus] >KGN52831.1 hypothetical protein Csa_014999 [Cucumis sativus])

HSP 1 Score: 366.7 bits (940), Expect = 1.3e-97
Identity = 203/210 (96.67%), Postives = 206/210 (98.10%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFVIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCG+GKVWLDPNEVNEISMANSRQNIRKLVKDGF+IRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKR+GTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180

Query: 181 LAQGPGEKPVAAAAPVAAPQAAQVSKKAKK 211
           LAQGPGEKP AAAAPVAA QA QVSKKAKK
Sbjct: 181 LAQGPGEKP-AAAAPVAASQAPQVSKKAKK 209

[Close]

BLAST of Sed0027352 vs. NCBI nr
Match: XP_008454314.1 (PREDICTED: 60S ribosomal protein L19-3 [Cucumis melo])

HSP 1 Score: 365.5 bits (937), Expect = 3.0e-97
Identity = 202/210 (96.19%), Postives = 206/210 (98.10%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFVIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCG+GKVWLDPNEVNEISMANSRQNIRKLVKDGF+IRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKR+GTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180

Query: 181 LAQGPGEKPVAAAAPVAAPQAAQVSKKAKK 211
           LAQGPGEKP AAAAPVA+ QA QVSKKAKK
Sbjct: 181 LAQGPGEKP-AAAAPVASSQAPQVSKKAKK 209

[Close]

BLAST of Sed0027352 vs. NCBI nr
Match: XP_038906352.1 (60S ribosomal protein L19-2 [Benincasa hispida])

HSP 1 Score: 365.2 bits (936), Expect = 3.9e-97
Identity = 202/210 (96.19%), Postives = 205/210 (97.62%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFVIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCG+GKVWLDPNEVNEISMANSRQNIRKLVKDGF+IRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKR+GTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180

Query: 181 LAQGPGEKPVAAAAPVAAPQAAQVSKKAKK 211
           LAQGPGEKP  AAAPVAA QA QVSKKAKK
Sbjct: 181 LAQGPGEKP--AAAPVAASQATQVSKKAKK 208

[Close]

BLAST of Sed0027352 vs. ExPASy Swiss-Prot
Match: Q9SRX2 (60S ribosomal protein L19-1 OS=Arabidopsis thaliana OX=3702 GN=RPL19A PE=2 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 2.2e-90
Identity = 187/214 (87.38%), Postives = 198/214 (92.52%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFVIRKPTKIHSR 60
           MVSLKLQKRLAASV+KCGKGKVWLDPNE ++ISMANSRQNIRKLVKDGF+IRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVMKCGKGKVWLDPNESSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR+MK AK KGRHSGYGKRKGTREARLPTK+LWMRRMRVLRRLL+KYRE+KKIDKHMY
Sbjct: 61  SRARKMKIAKMKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYM+VKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMRVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPG--EKPVAAAAPVA--APQAAQVSKKAKK 211
           LA+GPG    PVAA AP A  AP AA   KK+KK
Sbjct: 181 LAKGPGGDVAPVAAPAPAATPAPTAAVPKKKSKK 214

[Close]

BLAST of Sed0027352 vs. ExPASy Swiss-Prot
Match: Q9LUQ6 (60S ribosomal protein L19-2 OS=Arabidopsis thaliana OX=3702 GN=RPL19B PE=2 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 4.5e-88
Identity = 179/210 (85.24%), Postives = 188/210 (89.52%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFVIRKPTKIHSR 60
           MVSLK+QKRLAASV+KCGKGKVWLDPNE  +ISMANSRQNIRKLVKDGF+IRKPTKIHSR
Sbjct: 1   MVSLKIQKRLAASVMKCGKGKVWLDPNESGDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR + EAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRR L KYRESKKID+HMY
Sbjct: 61  SRARALNEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRFLSKYRESKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHK KAEKAREKTL+DQFEAKR KNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKMKAEKAREKTLADQFEAKRIKNKASRERKFARREER 180

Query: 181 LAQGPGEKPVAAAAPVAAPQAAQVSKKAKK 211
           LAQGPG        P  APQ  +V+KK  K
Sbjct: 181 LAQGPGGG--ETTTPAGAPQQPEVTKKKSK 208

[Close]

BLAST of Sed0027352 vs. ExPASy Swiss-Prot
Match: P49693 (60S ribosomal protein L19-3 OS=Arabidopsis thaliana OX=3702 GN=RPL19C PE=2 SV=3)

HSP 1 Score: 322.4 bits (825), Expect = 3.8e-87
Identity = 181/211 (85.78%), Postives = 195/211 (92.42%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFVIRKPTKIHSR 60
           MVSLKLQKRLA+SVLKCGK KVWLDPNE ++ISMANSRQNIRKLVKDGF+IRKPTKIHSR
Sbjct: 1   MVSLKLQKRLASSVLKCGKRKVWLDPNEGSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR++  AKRKGRHSGYGKRKGTREARLPTK+LWMRRMRVLRRLL+KYRE+KKID+HMY
Sbjct: 61  SRARQLNIAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPGEKPVAAAAPVAAPQAAQV-SKKAKK 211
           LA+GPG    AAA P    Q A+V +KK+KK
Sbjct: 181 LAKGPGGDIPAAAPPA---QTAEVPAKKSKK 208

[Close]

BLAST of Sed0027352 vs. ExPASy Swiss-Prot
Match: P36241 (60S ribosomal protein L19 OS=Drosophila melanogaster OX=7227 GN=RpL19 PE=1 SV=2)

HSP 1 Score: 241.1 bits (614), Expect = 1.1e-62
Identity = 132/201 (65.67%), Postives = 160/201 (79.60%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFVIRKPTKIHSR 60
           M SLKLQKRLAASVL+CGK KVWLDPNE+NEI+  NSRQNIRKL+KDG +I+KP  +HSR
Sbjct: 1   MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
            R R+  EA+RKGRH G+GKRKGT  AR+PTK+LWM+R RVLRRLL+KYR+SKKID+H+Y
Sbjct: 61  YRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFAR---- 180
           HD+YMK KGNVFKNKRVLME IHK KAEK R K L+DQ EA+R K + +R+R+  R    
Sbjct: 121 HDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREERIATK 180

Query: 181 REERLAQGPGEKPVAAAAPVA 198
           ++E +A    E  +AA A  A
Sbjct: 181 KQELIALHAKEDEIAAKAATA 201

[Close]

BLAST of Sed0027352 vs. ExPASy Swiss-Prot
Match: Q3T0W9 (60S ribosomal protein L19 OS=Bos taurus OX=9913 GN=RPL19 PE=2 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 5.5e-62
Identity = 126/181 (69.61%), Postives = 151/181 (83.43%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFVIRKPTKIHSR 60
           M  L+LQKRLA+SVL+CGK KVWLDPNE NEI+ ANSRQ IRKL+KDG +IRKP  +HSR
Sbjct: 1   MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           +R R+   A+RKGRH G GKRKGT  AR+P K+ WMRRMR+LRRLLR+YRESKKID+HMY
Sbjct: 61  ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           H +Y+KVKGNVFKNKR+LME IHK KA+KAR+K L+DQ EA+R+K K +R+    RREER
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARK----RREER 177

Query: 181 L 182
           L
Sbjct: 181 L 177

[Close]

BLAST of Sed0027352 vs. ExPASy TrEMBL
Match: A0A6J1DR76 (Ribosomal protein L19 OS=Momordica charantia OX=3673 GN=LOC111022408 PE=3 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 2.6e-99
Identity = 203/210 (96.67%), Postives = 205/210 (97.62%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFVIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCG+GKVWLDPNEVNEISMANSRQNIRKLVKDGF+IRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180

Query: 181 LAQGPGEKPVAAAAPVAAPQAAQVSKKAKK 211
           LAQGPGEKP AAAAP AA QA QVSKKAKK
Sbjct: 181 LAQGPGEKPAAAAAPAAASQATQVSKKAKK 210

[Close]

BLAST of Sed0027352 vs. ExPASy TrEMBL
Match: A0A6J1F757 (Ribosomal protein L19 OS=Cucurbita moschata OX=3662 GN=LOC111441469 PE=3 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 2.2e-98
Identity = 203/210 (96.67%), Postives = 206/210 (98.10%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFVIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCG+GKVWLDPNEVNEISMANSRQN+RKLVKDGF+IRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180

Query: 181 LAQGPGEKPVAAAAPVAAPQAAQVSKKAKK 211
           LAQGPGEKP AAAAPVAA Q  QVSKKAKK
Sbjct: 181 LAQGPGEKP-AAAAPVAASQPTQVSKKAKK 209

[Close]

BLAST of Sed0027352 vs. ExPASy TrEMBL
Match: A0A0A0KYA0 (Ribosomal protein L19 OS=Cucumis sativus OX=3659 GN=Csa_4G001980 PE=3 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 6.5e-98
Identity = 203/210 (96.67%), Postives = 206/210 (98.10%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFVIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCG+GKVWLDPNEVNEISMANSRQNIRKLVKDGF+IRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKR+GTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180

Query: 181 LAQGPGEKPVAAAAPVAAPQAAQVSKKAKK 211
           LAQGPGEKP AAAAPVAA QA QVSKKAKK
Sbjct: 181 LAQGPGEKP-AAAAPVAASQAPQVSKKAKK 209

[Close]

BLAST of Sed0027352 vs. ExPASy TrEMBL
Match: A0A1S3BYB1 (Ribosomal protein L19 OS=Cucumis melo OX=3656 GN=LOC103494752 PE=3 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.4e-97
Identity = 202/210 (96.19%), Postives = 206/210 (98.10%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFVIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCG+GKVWLDPNEVNEISMANSRQNIRKLVKDGF+IRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKR+GTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKIARREER 180

Query: 181 LAQGPGEKPVAAAAPVAAPQAAQVSKKAKK 211
           LAQGPGEKP AAAAPVA+ QA QVSKKAKK
Sbjct: 181 LAQGPGEKP-AAAAPVASSQAPQVSKKAKK 209

[Close]

BLAST of Sed0027352 vs. ExPASy TrEMBL
Match: A0A6J1J470 (Ribosomal protein L19 OS=Cucurbita maxima OX=3661 GN=LOC111482492 PE=3 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 2.5e-97
Identity = 202/210 (96.19%), Postives = 205/210 (97.62%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFVIRKPTKIHSR 60
           MVSLKLQKRLAASVLKCG+ KVWLDPNEVNEISMANSRQN+RKLVKDGF+IRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVLKCGRVKVWLDPNEVNEISMANSRQNVRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY
Sbjct: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180

Query: 181 LAQGPGEKPVAAAAPVAAPQAAQVSKKAKK 211
           LAQGPGEKP AAAAPVAA Q  QVSKKAKK
Sbjct: 181 LAQGPGEKP-AAAAPVAASQPTQVSKKAKK 209

[Close]

BLAST of Sed0027352 vs. TAIR 10
Match: AT1G02780.1 (Ribosomal protein L19e family protein )

HSP 1 Score: 333.2 bits (853), Expect = 1.5e-91
Identity = 187/214 (87.38%), Postives = 198/214 (92.52%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFVIRKPTKIHSR 60
           MVSLKLQKRLAASV+KCGKGKVWLDPNE ++ISMANSRQNIRKLVKDGF+IRKPTKIHSR
Sbjct: 1   MVSLKLQKRLAASVMKCGKGKVWLDPNESSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR+MK AK KGRHSGYGKRKGTREARLPTK+LWMRRMRVLRRLL+KYRE+KKIDKHMY
Sbjct: 61  SRARKMKIAKMKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDKHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYM+VKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMRVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPG--EKPVAAAAPVA--APQAAQVSKKAKK 211
           LA+GPG    PVAA AP A  AP AA   KK+KK
Sbjct: 181 LAKGPGGDVAPVAAPAPAATPAPTAAVPKKKSKK 214

[Close]

BLAST of Sed0027352 vs. TAIR 10
Match: AT3G16780.1 (Ribosomal protein L19e family protein )

HSP 1 Score: 325.5 bits (833), Expect = 3.2e-89
Identity = 179/210 (85.24%), Postives = 188/210 (89.52%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFVIRKPTKIHSR 60
           MVSLK+QKRLAASV+KCGKGKVWLDPNE  +ISMANSRQNIRKLVKDGF+IRKPTKIHSR
Sbjct: 1   MVSLKIQKRLAASVMKCGKGKVWLDPNESGDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR + EAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRR L KYRESKKID+HMY
Sbjct: 61  SRARALNEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRFLSKYRESKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHK KAEKAREKTL+DQFEAKR KNKASRERKFARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKMKAEKAREKTLADQFEAKRIKNKASRERKFARREER 180

Query: 181 LAQGPGEKPVAAAAPVAAPQAAQVSKKAKK 211
           LAQGPG        P  APQ  +V+KK  K
Sbjct: 181 LAQGPGGG--ETTTPAGAPQQPEVTKKKSK 208

[Close]

BLAST of Sed0027352 vs. TAIR 10
Match: AT4G02230.1 (Ribosomal protein L19e family protein )

HSP 1 Score: 322.4 bits (825), Expect = 2.7e-88
Identity = 181/211 (85.78%), Postives = 195/211 (92.42%), Query Frame = 0


Query: 1   MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFVIRKPTKIHSR 60
           MVSLKLQKRLA+SVLKCGK KVWLDPNE ++ISMANSRQNIRKLVKDGF+IRKPTKIHSR
Sbjct: 1   MVSLKLQKRLASSVLKCGKRKVWLDPNEGSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 61  SRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMY 120
           SRAR++  AKRKGRHSGYGKRKGTREARLPTK+LWMRRMRVLRRLL+KYRE+KKID+HMY
Sbjct: 61  SRARQLNIAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDRHMY 120

Query: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREER 180
           HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERK ARREER
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 181 LAQGPGEKPVAAAAPVAAPQAAQV-SKKAKK 211
           LA+GPG    AAA P    Q A+V +KK+KK
Sbjct: 181 LAKGPGGDIPAAAPPA---QTAEVPAKKSKK 208

[Close]

BLAST of Sed0027352 vs. TAIR 10
Match: AT4G16030.1 (Ribosomal protein L19e family protein )

HSP 1 Score: 77.4 bits (189), Expect = 1.5e-14
Identity = 66/137 (48.18%), Postives = 80/137 (58.39%), Query Frame = 0


Query: 58  HSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDK 117
           HSRSRAR      RK RH+GYG  K T EA         RR+++L+RLL+K+  +KKIDK
Sbjct: 7   HSRSRAR------RKCRHTGYG--KDTMEALRRIMKRLTRRLKMLKRLLKKFCWNKKIDK 66

Query: 118 HM-YHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFAR 177
            + YHDM+MKVKG V+KNK VLMES+HKS                       SRERKF+ 
Sbjct: 67  LVYYHDMFMKVKGKVYKNKCVLMESMHKS-----------------------SRERKFSG 112

Query: 178 REERLAQGP-GEKPVAA 193
            E RLA  P GEK  +A
Sbjct: 127 SEMRLALEPEGEKTASA 112

The following BLAST results are available for this feature:

BLAST of Sed0027352 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155266.1	5.4e-99	96.67	60S ribosomal protein L19-1 [Momordica charantia]	[more]
XP_022934250.1	4.6e-98	96.67	60S ribosomal protein L19-1-like [Cucurbita moschata] >KAG6581284.1 60S ribosoma...	[more]
XP_004152239.1	1.3e-97	96.67	60S ribosomal protein L19-1 [Cucumis sativus] >KGN52831.1 hypothetical protein C...	[more]
XP_008454314.1	3.0e-97	96.19	PREDICTED: 60S ribosomal protein L19-3 [Cucumis melo]	[more]
XP_038906352.1	3.9e-97	96.19	60S ribosomal protein L19-2 [Benincasa hispida]	[more]

BLAST of Sed0027352 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SRX2	2.2e-90	87.38	60S ribosomal protein L19-1 OS=Arabidopsis thaliana OX=3702 GN=RPL19A PE=2 SV=1	[more]
Q9LUQ6	4.5e-88	85.24	60S ribosomal protein L19-2 OS=Arabidopsis thaliana OX=3702 GN=RPL19B PE=2 SV=1	[more]
P49693	3.8e-87	85.78	60S ribosomal protein L19-3 OS=Arabidopsis thaliana OX=3702 GN=RPL19C PE=2 SV=3	[more]
P36241	1.1e-62	65.67	60S ribosomal protein L19 OS=Drosophila melanogaster OX=7227 GN=RpL19 PE=1 SV=2	[more]
Q3T0W9	5.5e-62	69.61	60S ribosomal protein L19 OS=Bos taurus OX=9913 GN=RPL19 PE=2 SV=1	[more]

BLAST of Sed0027352 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DR76	2.6e-99	96.67	Ribosomal protein L19 OS=Momordica charantia OX=3673 GN=LOC111022408 PE=3 SV=1	[more]
A0A6J1F757	2.2e-98	96.67	Ribosomal protein L19 OS=Cucurbita moschata OX=3662 GN=LOC111441469 PE=3 SV=1	[more]
A0A0A0KYA0	6.5e-98	96.67	Ribosomal protein L19 OS=Cucumis sativus OX=3659 GN=Csa_4G001980 PE=3 SV=1	[more]
A0A1S3BYB1	1.4e-97	96.19	Ribosomal protein L19 OS=Cucumis melo OX=3656 GN=LOC103494752 PE=3 SV=1	[more]
A0A6J1J470	2.5e-97	96.19	Ribosomal protein L19 OS=Cucurbita maxima OX=3661 GN=LOC111482492 PE=3 SV=1	[more]

BLAST of Sed0027352 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G02780.1	1.5e-91	87.38	Ribosomal protein L19e family protein	[more]
AT3G16780.1	3.2e-89	85.24	Ribosomal protein L19e family protein	[more]
AT4G02230.1	2.7e-88	85.78	Ribosomal protein L19e family protein	[more]
AT4G16030.1	1.5e-14	48.18	Ribosomal protein L19e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000196	Ribosomal protein L19/L19e	SMART	SM01416	Ribosomal_L19e_2	coord: 3..146 e-value: 3.1E-97 score: 339.0
IPR000196	Ribosomal protein L19/L19e	PFAM	PF01280	Ribosomal_L19e	coord: 4..145 e-value: 1.5E-64 score: 216.4
IPR000196	Ribosomal protein L19/L19e	HAMAP	MF_01475	Ribosomal_L19e	coord: 3..149 score: 20.563551
None	No IPR available	GENE3D	1.10.1200.240		coord: 57..188 e-value: 9.3E-59 score: 199.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..79
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..184
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..210
None	No IPR available	PANTHER	PTHR10722:SF26	RIBOSOMAL PROTEIN L19	coord: 1..210
IPR015972	Ribosomal protein L19/L19e, domain 1	GENE3D	1.10.1650.10		coord: 2..56 e-value: 1.1E-31 score: 110.5
IPR039547	60S ribosomal protein L19	PANTHER	PTHR10722	60S RIBOSOMAL PROTEIN L19	coord: 1..210
IPR023638	Ribosomal protein L19/L19e conserved site	PROSITE	PS00526	RIBOSOMAL_L19E	coord: 7..26
IPR033935	Ribosomal protein L19, eukaryotic	CDD	cd01417	Ribosomal_L19e_E	coord: 4..167 e-value: 1.69422E-75 score: 222.996
IPR035970	Ribosomal protein L19/L19e superfamily	SUPERFAMILY	48140	Ribosomal protein L19 (L19e)	coord: 3..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0027352.1	Sed0027352.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome