Sed0027332 (gene) Chayote v1

Overview


Name	Sed0027332
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Basic helix-loop-helix (BHLH) DNA-binding superfamily protein
Location	LG11: 6618461 .. 6630354 (+)
RNA-Seq Expression	Sed0027332
Synteny	Sed0027332

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACGCAACCGGAATCCGCCGGCGATGGAGGACATTCTGGATGAGTATCAGTCATTCTGGGAAACCGACATGTTTCTGCAGCGGGATGAGATGGACAGGTTTGTTTTGGGTAAATATTTAGAGCTCTCTGTTTGTAATTTCATCTCTCCTTAATTTAATTAAATTTCAGTTGGGTTCTGGACGAAGCATTTTACGGTTGTTACGATTCGAGCTCGCCGGACGGGGCGGCGCTGTCGTCGGAGTTGGACGCATCGAAGAATATCTTGTCCGAGCGGAACCGGAGAAAGAAGCTTAATGATAGGCTCCTCTCTCTCAGAGCTGTCGTCCCTAATATCACCAAAGTAAGTTTTTTCTTCTTTTTATTACGGGTAGTTGTTTGAAAATGAATATTTATTAATTACCCTCAATTTCAAACGGTTGTTTAACTCTTCATTTCTAGCCGTTTAATTTCAAACAGTTATTCAAAATAATTTATTTTTTAATATTTACGATCAAAATTTGTTATTATCTTTAACATCTTTACAAAAGCAATAGTGTCCTTCCATTTTAACTAATCAAAATATATTCCTCATCCCCGATCTCATTTAAACACTTCTTCTATTTTTATTTTACTTTTATATTTATTCTCTTTTAAAATTAAAATAATCCCTTCACCTTTGTTAATGTATTGAAATTTTAAAATGTATTTAATCGTATTAATATATCGCACAAATGGAGCATTGTAAGAATAAAGTGTTTGTTTCTAAGATATAAGACTAAATTGAAATTAGTTCCAAATCATTAGGGAATAAAAGTTTTTATACATATATATAGTTTTTCACTTATCTTTTTGGATTTTGTTTCAATTTATCCTCCATTATAGTTCAATGAGACATTTATTTTAGTATTCATAGAGGCTTAGCAACCATTAAAAAAAAAAATCCAAAATGATTAGTAACTTTATGGTTTCAATTGTATGGTGACAATTTAGTTAAAGTACGATTACGAATTCAATCTCGAAAATAGGTGAAAATCGGTATATTAAGTTTTCTGACCAAACAAGGATTTTCAAACCTTTTATAGTCACAATTTTTTCATAATCTTTTCAAAACAATTGAATATTAATATATTTTTTTCTAAAGTTTGATTGGTTAGAAATTGTTCATATTCTACGAGATGAACGTATGTCTGCCTAGAAAATGCAATCAGTAGGATGTGACAGTACATAGGTTGTCCATTGACTAATTTATAAATATTTGTACAATGGAAAGAAAAAACTTATGAATAAGTATTGTGTGTATAATAATGCATATAGAATTATTCAAAGTGGTCAAATAAAAATTTAAGATATTTAAATTGATAAGTTTAATTTATGATTATATAATATTTATTATGTGAGATATATTCAATTTTGACAATACAATCGAGAGACACCACTCTCTAATCTTATAATTTTTAGGGGATTTTGCATGTATAACAAAAAAAGGTAAAATATTTCTATCTATAGCACAAAATCTAAAATAATTTCATTTGTAGCAGAAAATCCAAATTGACGTCTATCACTTGTTGAGTTCTACTAGTGATAGAATTCAATCAATGATAAACTCATTCTATCACTCCTTAAGTTTTCTATCAGTGATAGAAATCTAAATTGAGTTCTATCACTAGGTGAGTGATAGACTATCACTAGGTGAGTGATAGAAATAAATATGCTATAGATGAATTATTTTAAAAATTATGCTACAAATATAATACAAGAGGTAGAATGTGCTGCTGATGGTAAATTCTCTAATTTTTATAAATTAATCCGATGATTTGATGAAACCTTAAATATATTTTCATTATTTGTAATCATTTACAAATTAAATACGTGAAAATCACTATCATACATAAAATGATTAAAGTTTTTTTTTTTGTTTGATAAGTGACTTTAACTTTTTTTTTAACAATTTAGTCACTTAACTCTAATTTCTATTATATACACATAATAAGTAACGTTTAATTATTTAATTATTTAATTCACTAACACTTAAAGATTATTCAATTCTCGAACACTTCGAAAGACAAAGAACTGTTGCTCTTAGACTATAAGTTTTAATATATAATTTATTTTCATCATGCATCAACTTTTTATTATTTATACAAAAAAGGTGATTGATATATGTATATTATTACACTGAGCCATGCTTGTTTTTTGAAGCCTACACTGAGCCATGTTCAATCCTCTATCAAATGAGGTTGTGTTCCAAAAATAAAGAAATAATGTGGAATAAATACATAGATAGATAGAAGATATTTCAAGAGAGGTAAATGGAGATTGAGAAATAAAGAAGTTTTTGAAAGGACAATTTTACGTTAGAAATAGGTCAAATTAAAAAAATATTTTCAAAATAGCAATCATAATAAGTACACTAATTATGTAGTATATATTATGTATACAATCTTGTAGTAATAACATGTAATATTGTATTAATAATACATAATAATGTATTAAAAATATAAAATATTGTATTAATACACTAAATTATACCGTATGATAAAAATTAATTATATAAATATTTTTAAAATTTGTTTAGATTTTCAATTTTTATTTTTGTGAAATTGGACTATCTACCGCACCTTTTACAATATTGCTTAAATTTAACTTTGGAAGTTAATCGCCACACTTATACAATTTTAAAGAAGATAATTGATTAAATTAAAAGTTAGTGTGATTGTTAGAGTGATTTGATTCTTAGAAGAAAAGAAGAAAAATAAATAAAATATGGTGATTTGTACAATTTTTCATAAAATTAATTAATTAATAATAATATTATTATATTTTTTTAGAGTAAAATATGAATTTAATCTCTATGGTTTGAAAAACAAAAGTTAGAGTTTGGTTCTTATGGTATAAAAAATTAGAGATCGGTCCCTATAGTTTGAAAAAATATAGAATCTAGTCCTCGTGGTTTAAAAAACTAGAATTTAGTTCCTATGATTTGGTAAAATCTATTATTTATCGTGTCACCGCATTAAGTACGTAAAAGTTAGTTATTCACGTGTCAATGATAAAATTAGTTATTCATGTGTCAATGTTCAAATTATGAGTTAAGTAATTAATATAACAACAAAATTTATATCATTGATATATGAATAGTGAGCTTCCATGTTTTTTTTAGTACATTTTGGGGGAGAGGAGACAAATACTCATACTCGGGATCGAACAAGTGACACTGTGTTGAACTGGTTTACAACTAAACAATGAAATTAGTGCACCATTGATCCATTCGGTGCTTCCATGTACTTAATACACCAACGATACTGTACGACAAATTTTAGATTTTATAAAAGTATAAGGATTAAATTCTTATTTTTAGAATTATAGAGATTAAATTCTAATTTTCTTCAAATTATAGTGACTTAATTTTACATTTGTTCAAACTACAGAAACTAAATTTTAGTTTTTGAAAGGTTAAAATACAATTTTCATACCTCGACTTTGGGGGTTTGTTCCATTTTAGTCCTTCGACTTTAATGTTTGTCCACCTTTGATCCCTCAACTTCGTTGTTTGTCTAATTTTGGTCCCTAGACTATCAAGAAGGTTAAAAAATAAATGGTCCTTTTGAAAAACATTTTTCACTCCTAAATTATTTTCTCTCTTCTATCTTTCATCATTTCTCTCTCTCAATTTTTTTTTATCTCTTTCCAATCCACCTCTCTTTTCTGCTTCTTTTTTTTTTCTTCTTTCATTCTCTTTATTTTTCTCATCGGTTCTATGGTAGACTACAAATTTTGTAAATAAAAAGTAATAAATTAAAGTAGGGAAATGATTATTTAGGAAAGTTGTCTCACGTTAGAGATTTTGATGAGATGAAATGAAGAGAGAATAAGAGAAAAAAAACTAGAGACGTGAATTTAAGAGGTATAAAACTTTTAGAAAGAGAAATGATGAAATATGAAGAGCGAGAAAATAATTCAAGAGTGAAAAAAATCATTTGACTAAAGGACTATTTTGAACTTTCTTGACAGTTTAGAGACCAAATTTGAACATTTGAAAGCCTATAGATCAAAATTGGACAAACAACTAAGTCGAGTGACCAAAATTGGACGTTTGAAAGTTTAGAAACCAAAATGGAACAAACTCCAAAGTCGATGAACAAAAATGGTATTTTAACCTTTTTGAAACCATGAAAGCTAAACTCTAGTTTCTGAAATTAGGGCATAAACTTTATCTTTCTTCCAACCAGTGTTTTAAAAAGCTCAACGCGCACTAAGGCGCATTGACCCTCTGGAGCCTAAGGCGCAATGAGCACTAAAAGGCGCATGCTTTTTACTAAAGCCACATACATGTATACATACACAAAACATATATATTATTCTCTTTCAATATAGAGTTTTTTTACATACAATTAGGTTTTAATCGTTGATTGAATTTGAAATTGTAAAAAAAAAAGAAGAGAAAAATGAGTAGAACATTACCGTTTGACTTAGATTTTAAATAAATGAAAAAGTCTTCAAGACGTGCGACTTGCGCACCTAAGGGCTTTAAGAAAAGGCGCGTGTCTGGAAAGGCGAGGCACCAACATTGAGCCTGAGGCGTGCCTTTTGGGGCTTTTTGAAACACTGCTTCCAACCAGTGGTATTTTAACCTTTTCGAAACCATGAAAACTAAACTCTAGTTTTTGAAATCAGGATCTAAACTCTTCATTTCTTCCAACCATAGGGGCTGTTTGTTTGACGTTTTTAGCTAAGAGTTAGGTTTATGATTTATTAACTCCTCCTCGAAAACCTACATCCAACCGAATTTTTACCAACTTCTCAATTTTATTTTTAAAAATAACTCTCATTTTTAACCATTCATTTTTAATCATTCATTTATAACTATTCAATCATTTCTAATAACTCATTTTTAATCATTCCTTTCAAATCAATTAAAATAATTTTTTTTTAATAAGTTTTTTTTTAACTACTAAAAATAACTACTCATTTTAAATTTACATTCAAACAAATTTTGACACAACTCTCAATTTTTAACTATTCAATATAATTCCTTAACCTAAAAACTACCTAAATATGTCAAACAAACACCCCCATGACTACTTTTAACTATTCAATATAATTCCTTAACCTAAAAACTACCTAAATATGTCAAACAAACACCCCCATGACTACTTAACTTTTAAGCGAAGAAAAGTGGTGGCCGGGGGGGCCCGAAAAGCTAATAAAATTAAATTCCCTATCTCAAAAAAAAATTCCATGTTTTACCGTCCCCGCCCCGTTGCCCGCCCAATCGGAGATTTACCACCCCTCGGTCCCCACAGGGAAAACGGACATTCCCTATGGGAGAGGGAGGGGGCGTGAATGGAATTTTGGGTTTGAGAAGGAAAGAAAATGGTAATTAACGTTAATCTGTTGAACACAGATGGACAAGGCATCAATAATCAAAGATGCGATCGAGTACATCCAGGAGCTGCGTGATCAAGAGAAGAGAATCAAAACAGAGATCTCAGATCTTGAATCGGGAAAATTCAACAACGGATCAACAGCAACGAATCCATTGATCAACGACAACGGCAATGGAATCTCGGCGAACAAGAGGACGAATCGACAAACCTCCGACGCGCCGTCGTCTTTCCCGGTTGAACTTCTCGATGTAAGTGATTCGTAATTTGAGTTCGAATTCGAATTTCTAAAGCTCTCTTTGTTAGTTTGCTGAAATTGATTGAAATCTGAGTTCGATCTCGGATTTGTAGGGCTTTTATTATTTGTTTGCTGAAATTGATTGATATTTGAGATCGAAATCGAATTTCTAGGGCTTTTGTTATTTGTTTACTGTAATTGATTGATATTTGAGTTCGAATCCGAATTTCTAGGGCTTTTGTTATTTGTTTGCTGTAATTGCGTTCGAATCCAAATTTCTAGGGATTTTGTTACTTGTTTGCTGAAATTGATTGAAATTTGTGTTCGAATTCGAATTTCTAGGGCTTTTGTTATTTGTTTGCTGAAATTGATTGAAGTTTGAGTTTGAATCCGAATTTCTAGGGTTTTTGTTACTTGTTTGCTGAAATTGATTGACATTTGAGTTCGAATTCGAGTTTCTAGGGCTTTGTTTTTTTGTTTGCTGAAATTGATTGAAATCTGAGTTTAAAATTCGAATTTCTAGGGCTTTTGTTATTTGTTTGCTGTCATTGATTGATATTTGAGTTCAAATTCAAATTTCTAGGGCTTTTTTTGTTTGCTGAAATTGATTGAAATTTGTGTTCGAATTCGAATTTCTAGCAGTTTGTTGTTTGATTTCTGAAATGGATTGAAATCTGTTGTTAGTTGAGTGTGAATTACTTGGGGGAGAAGACGATCCTGGTAACCTTGTCGTACGGATGCAGAGGCGATGCTATATTGAAGGTTGCAAAGTGATTGAATCGCTGGAGCTCAAAATCATTACCGTTAACAGCTCCGTCGTCGCCAACAGGCTTTTGAACACTGTGTTCGTTGAGGTTAGTGCTTTACTCTCTCTCTGTGTCTCCTTCACTGGTCATTTATTTTTCACCTCTTGAATCATGAAACTTGAAAAGCCATTGCTATTGTTTTTGTAGGTCTGTTTATCTATGATTTTGATAGATGAGTTTAAAGTAATTAGGAGCCCAGCTCTTAGACTTTTAGTGTAAAGTAATCACTCATTTTGAAACACTTATTTTTAATCACTCGTTTCAAATCAATCAATCAATCCAAACAAGCTATTGCCCACATCCCAATTTTTAAGCACTCAAAATAGCTCCTCATTCTAATCACTCTTACAAATCCTCATCCAAACAGCCCCTTAGACTTTTAGGTTTGTGTTTTCTTAAATTTTTTTATTAAGGGTCGAAGTTCCTAAAGTTTGCATTTGTGTCTGTTAATTGGTCTATGAAGTGAAGTGTCAAATTGGTATTTCAATGTTGAATTTTGTATTTAATGGATCCTTGCAATTTTTAGTTCTAATATTCAATTTGATATCTAACATAACTATTAATTTTTGTAAATGTGAACATTTTAGGGGTCTACTAGATACGAAATTTTAAGTTCACGGGCCTACCTATTAGACTTTTTTTAAAAAAAAGTTTAACGTCTAAATCGCACAAATTTGAAATTTTTGGGACTAAATTTGTAGTTGAAACCAAGTTCTATTAGTTATTAAGTTAACCCATGATGGTTCATTGAGATAAACTATTATGAAATCTTAAGCAGATTATGGCTATATTAGTTTCATTTAAAAGTATCCGTCTAAACCAGTTTAGCTGCATGCTCATATTGACTTAGAAAGTTCATATTCATCCCTTAGATGTAACAAGTGTAAGCTTAACTCCTTAAAACTTTTTGTTTAACAAATTTCAAATGTTAATTAATCAAATTCAAAAGTGATTTAGAGGTTAATAAACACAGTAAAAGGTTATTTCAACATGAAAGCTCACTGAGTATTCTTATGTCTATCAACTAAATATCATAGCACTTCTCTAAGTTTATGTGCAATTTGTTGACATGGGAAGTTTACAGGTAAAAATGAATACATACCATACCACGTGGGGAATAAAAATAGATATATTCCATTCTATTCTATTTTCTCTCTCCCCTTCACACACATATATATATATATATTAAACAAGGGTAACCACGCCCGTCCCTAGTCCAGGCACCAGGAGACATTGAAAGAATAATGTCACATGTTAGTTTCGAACCCAAAACCTTGAAGGGAGCGGAAGCCCAAGTCTTCAACTACTGTGCCACCGCTTAGGGACCTCTCCCCTTCATATATTGCAAGTCCATAATTTAGATTAGTGTATAGGCAATGAACACTGATGGGCGCCATGTGATATTGGTTTATTTGGTTTTGGTTTTTGTTTTGTTCCGTCTAATGTTCTTGTCTCCCACCCCATACTGTTGTATCTAGACTATACAATCGGAGCGAGCCGCTCCATTAATTGATATCTTTTTTCAAAGATGAGAAGTGAGAAACTAGACGTCACCCCTACAATGTCAGGTGCTACATATAGCATTCAATTGTGTAAGCCAAAACTTCGATACAAGAGTACCCACATTACCTCGTTTTAGGGGCATTGGATGGTGAGCGGGTTACATTGAGGTTTGAGAAAGTTATAGGAAAACCTCACCCAGTAAGTTTGGGTTTTGTAAGACCAAAACACAGGAATTCATGCCTTCCTGGCGTTATTTATGCTGATGGTACAAATTTTGACTGAAAAAAGATGTTTTCTCAACGTTTAGCTTGTCTGCCCAGGAAGAATTGAGTAAGGCAGACGATTTAGGCTTTTCACCCCGGTAGCTTGAACCGTCACAGCGTTTTTTTTAAAAAGAAATGCCATCCTAAGGAAACTCCAACCGTTCAAGATGAATCATCAGTCTTTAAGCCCACGAAAGACCGATGGTCTCGTTAACCTTCCCCTACGAGTGTAAAAAATTGGATAACCATTGGCAGGAATTGAAGAGTTGGTCGACGGTTTAGTCCACCAGTCAGCTTTTCTTGGGTTTTTGTGGACAACTCAACTAGATCTTTGACAAATCCAAAACTGAGCTCAAAATTGAGATTTCCTCTTTTTATTTTTTGAAACTGGAAAATCGGAATTTTGCGCTACTATACCTTGGGTAACTACCCCAAACCAGACATCGGACTACATTGAAGGAACAAAGACACGAAGACATGGGAGACAAATAAATGTCACAAGTGAATCTTGAACTTTCAAAGCTCAAGTTTCAGATGTCTCCAAGAGACTCACTTGTGACATTACTCTTTTGATGTTTCCAATGCCTGGCCTAGAAATGAGTGTGGTTACCCTTGTTTTAAAAAAAGCCCAGGCTTCAAATCCCCAATTTTTGCTTCCTCTCATTCACTTCCCTCGAATTTCCCTCAAGTTCCCCATCCCCAATGCCAGACGGCACGCGGGTACCCAAATTTGAGTTGGTTACATTGAGGGTACAAGTTTAATTTTTAGGAAATTTTGGTCTGAAGTGTAAGTGTAAGAAGTTTGAATTTTTAAATATTATGTGAAAATTGAGTTTAGAGGAATTGGTTTGAATGGTATTATTAAGAGTTGTGATAAAAGTAGAATCCCCATCTTTAGCTAAGTCTTTTTTTCTTCATTTGACTTTGGCTCCTTAACAGTTGAACCTGAAGAATGGCAGAGTTAGAGGTCAGGGTATGGATGGTGAGTGTAAGGGAGGGAGGGTAAATGAGGAGTCAGACGACAAGGGTAAAAAAGAGAGAAAGGAAAAGGTGATGAAATGAGAGAAAAGAGACAAAATGGAAATAAACAAAATAAACCATTAAAGTCAAGTTTTACTATCAAATTTACAAGTTTTGTCATAACATTTTTTTCCAAGAAATAGTATTATGAGGTTAGACAAAGCCAAGCACTTAATCGTGAATCATGTTTTTTTGTTAAATAATAATTAACCGAACTTGTTTTTAAAACTTCTTGCCCATACTTGGGATGGGAGATTTGATTATATCTATGACCACTTGATTGGAGAAACATTTAGTTAGGCTCATTTTGACAATAATTAATATAATTGAATGTCCATATAAAACTATTTTCAAGCTGTGAAATATTTATTAATTAGTTTTTAAAAAAGATCTGAAGGAATTAACTTTCAGAGTCTAGAAAAGCTACTCATTTTAGAATGAGGTTTATATGGATGTAAAATAAAATTAAAATAGGAGGGGCAATGAGGAGTTGGATGACAGGGGGGAAGAAAAGGAGAGAAAGGGGGGATGTTGAAATGAGAGAAAAGACACAAAATAGAAAAAACACAAAATAACCCATGAAGGTCAAGTTTTAACATAAAATTTACAAGTTTTGTAATAGCATAATTTAAATAAATAGTATTATTGGGTTAGACAAAGTTAACTGTGAATTATGTTTTTTTTGTTAAATAATAATATATATATTTTTAATATATATTGGGGGAAGGACATAAGTACCGATTATTGGGATCGAACCTGTGACGCTTGTATTGAATTAACCTAACTTGTTTTTAAGTTTTTAATTATATGTGGGTGGGGAGATTTGAATATATCTATGACCACTTGATTGAGGATATTTAGTCATGCTCATTTTGACAATAATTAACCTAACGTAATAGCTTTTTTTGGATATCCATGACTGTTCGAATAAGTTTGCATGCACCACGACTAATGTCACGAAACATATTGCTTGATTCTACAATATTTGGATGTCAAGGAAACACATAGGAAATTAATTTCTAGGTAGGTGGCTACTATGGATTGAACTCATCACTTTAAGCCACTCTATGATGGTTAACCTAATGTAATGTTGTATTAAAACTATTGCAAACTATGAAAGATTAAAAGTTAGCTTATAATAATTTGAAGGACACGACATGTTTATTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGCTCCTAAATTAAAACTTGAAGGGCTTAGAGCATGGTTGAGTTATTATAACAGCGAGCTAGAGTTATTATAAAGCGTGTTATCCTAAACTTTGTTTGAGGTTTATGCTATCATAAAATGAGTTTATGATAAATGGTGTTTGAGGTGCATGTTAGTATAATAATGGTTATAATGAACGGTATTTGTTGGCATGTGTTATGTGAAGCAAGCGGAAATTATGTGAAACGAAAGTTTGAATTTGAGCCAACCTATTGATTATTATAATAGATGAGTCAAACATGGGCTGAGTTATAATAACTCAACTCTCTGTTTTCATAAACAGCCTCAAACTTAGAGTTAAGACTATTTTTTCAAAGAAAGATATGATAAGAGTAACTGTTCACTTGGCTCTCTAGTCAAGACTTAAATATTTTAGGTCCCGTTTGATAATCATTTCGTTTTTGGTTTTCTGTTTTTGTTTTTAGTATTTTAAAAATAGGTTTGTTTGATAACCAAATTTAGTTTTAGTTTTTAAAATTTTAAAAATGTTTTAAAAATATTAAAGGAATTCTAAAAACTAAAAGAGGTAGGTTTCAAAAACACATTTTTGTTTTTAAAACAGCATGAAAAAATCATGAATAAATAGTAAAGAACTAAAAAAAAAGTTATCAAACATGTTTTTTGATTTTTAGCTTTAAAAAACATAAAACTAAAATGAATTATTAAACAAATATAGTTTTTATTTTTTAAAACAAAAATCCAAAGTCCAAAAATGAAAAACTAGAAACAAAAATGAAAAACGAAATAGTTATCGAACGGAACTTTAAGTATTCACTTCTAAAAAAAATTGCACTTAGTTTCGAGTGTTTCATTGGCTTGAAATTGGCTTCAACTACTATTTAGTCAATGCTCGATGGATGATTTTAGTCTTGGGTAGTATTAATTTTTTTGTACGATTGTCCTAACCACAGTGTACACAATAATATGTTCATATAAATGTTATTTTTTTCAAACGATATTCGATCTCAATATGGTCTTACATGTCGAAAATAAGCTAGGGTATCGCATTTTCTTTTGAAGAAAATATTACTGTCTATTTTTATGTTGCATCTAAAGTAAAATTATTGGAATTTTACAGGCAGAGGAAGCAGAGGAAGAGGAGCTAAAGATAAAAATAGAAAGAGCAATTGCAGCAATCAGTGAAATCCCCATAAGCATTTGATAAACTCCACATGTATCTTTTGTGGCACCCAGTTTGTCATCTAATTTCTAGTAGAATTGTCTCTCTTTTCTCTCCCTCTTTGTCATCTCTCTTTCCCTTCCTTTGAGTGAGATAATTGGATAAAGGGTAAATTATACTTTTGGTCTTGGAGGTTTGGGGAAAGTTAGAATTTAGTTTCTAAAGTTTCAAAATCTTAAATTTAGTTCTTATATTTCGAATAAAGTAAGAATTTAGTCTTTAAAATTAGAATTTTATCTTTATACTTTGATAAAGTCTAAAAAAGTCTTCGTCATTCATAGTA

mRNA sequence

AAACGCAACCGGAATCCGCCGGCGATGGAGGACATTCTGGATGAGTATCAGTCATTCTGGGAAACCGACATGTTTCTGCAGCGGGATGAGATGGACAGTTGGGTTCTGGACGAAGCATTTTACGGTTGTTACGATTCGAGCTCGCCGGACGGGGCGGCGCTGTCGTCGGAGTTGGACGCATCGAAGAATATCTTGTCCGAGCGGAACCGGAGAAAGAAGCTTAATGATAGGCTCCTCTCTCTCAGAGCTGTCGTCCCTAATATCACCAAAATGGACAAGGCATCAATAATCAAAGATGCGATCGAGTACATCCAGGAGCTGCGTGATCAAGAGAAGAGAATCAAAACAGAGATCTCAGATCTTGAATCGGGAAAATTCAACAACGGATCAACAGCAACGAATCCATTGATCAACGACAACGGCAATGGAATCTCGGCGAACAAGAGGACGAATCGACAAACCTCCGACGCGCCGTCGTCTTTCCCGGTTGAACTTCTCGATAGGCGATGCTATATTGAAGGTTGCAAAGTGATTGAATCGCTGGAGCTCAAAATCATTACCGTTAACAGCTCCGTCGTCGCCAACAGGCTTTTGAACACTGTGTTCGTTGAGGCAGAGGAAGCAGAGGAAGAGGAGCTAAAGATAAAAATAGAAAGAGCAATTGCAGCAATCAGTGAAATCCCCATAAGCATTTGATAAACTCCACATGTATCTTTTGTGGCACCCAGTTTGTCATCTAATTTCTAGTAGAATTGTCTCTCTTTTCTCTCCCTCTTTGTCATCTCTCTTTCCCTTCCTTTGAGTGAGATAATTGGATAAAGGGTAAATTATACTTTTGGTCTTGGAGGTTTGGGGAAAGTTAGAATTTAGTTTCTAAAGTTTCAAAATCTTAAATTTAGTTCTTATATTTCGAATAAAGTAAGAATTTAGTCTTTAAAATTAGAATTTTATCTTTATACTTTGATAAAGTCTAAAAAAGTCTTCGTCATTCATAGTA

Coding sequence (CDS)

ATGGAGGACATTCTGGATGAGTATCAGTCATTCTGGGAAACCGACATGTTTCTGCAGCGGGATGAGATGGACAGTTGGGTTCTGGACGAAGCATTTTACGGTTGTTACGATTCGAGCTCGCCGGACGGGGCGGCGCTGTCGTCGGAGTTGGACGCATCGAAGAATATCTTGTCCGAGCGGAACCGGAGAAAGAAGCTTAATGATAGGCTCCTCTCTCTCAGAGCTGTCGTCCCTAATATCACCAAAATGGACAAGGCATCAATAATCAAAGATGCGATCGAGTACATCCAGGAGCTGCGTGATCAAGAGAAGAGAATCAAAACAGAGATCTCAGATCTTGAATCGGGAAAATTCAACAACGGATCAACAGCAACGAATCCATTGATCAACGACAACGGCAATGGAATCTCGGCGAACAAGAGGACGAATCGACAAACCTCCGACGCGCCGTCGTCTTTCCCGGTTGAACTTCTCGATAGGCGATGCTATATTGAAGGTTGCAAAGTGATTGAATCGCTGGAGCTCAAAATCATTACCGTTAACAGCTCCGTCGTCGCCAACAGGCTTTTGAACACTGTGTTCGTTGAGGCAGAGGAAGCAGAGGAAGAGGAGCTAAAGATAAAAATAGAAAGAGCAATTGCAGCAATCAGTGAAATCCCCATAAGCATTTGA

Protein sequence

MEDILDEYQSFWETDMFLQRDEMDSWVLDEAFYGCYDSSSPDGAALSSELDASKNILSERNRRKKLNDRLLSLRAVVPNITKMDKASIIKDAIEYIQELRDQEKRIKTEISDLESGKFNNGSTATNPLINDNGNGISANKRTNRQTSDAPSSFPVELLDRRCYIEGCKVIESLELKIITVNSSVVANRLLNTVFVEAEEAEEEELKIKIERAIAAISEIPISI

Homology

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BLAST of Sed0027332 vs. NCBI nr
Match: XP_038889762.1 (LOW QUALITY PROTEIN: transcription factor bHLH35-like [Benincasa hispida])

HSP 1 Score: 255.8 bits (652), Expect = 3.5e-64
Identity = 162/243 (66.67%), Postives = 186/243 (76.54%), Query Frame = 0


Query: 1   MEDILDEYQSFWETDMFLQRDEMDSWVLDEAFYGCYDSSSPDGAALSSELDASKNILSER 60
           ME+ILDEY+ +WET+MFLQ +E DSW LDEAFYG YDSSSPDG    S L+ASKNILSER
Sbjct: 1   MENILDEYRYYWETNMFLQTEEFDSWGLDEAFYGSYDSSSPDGTL--SSLEASKNILSER 60

Query: 61  NRRKKLNDRLLSLRAVVPNITKMDKASIIKDAIEYIQELRDQEKRIKTEISDLESGKFNN 120
           NRRKKLNDRLL+LRAVVPNITKMDKASIIKDAIEYIQELR QEKRI++EISDLESGK NN
Sbjct: 61  NRRKKLNDRLLALRAVVPNITKMDKASIIKDAIEYIQELRAQEKRIESEISDLESGKINN 120

Query: 121 GSTATNPLIN-DNGNGISANKRT---NRQTSD-APSSFPVELLD---------------- 180
             TATN   +  NGN IS  +RT   NR+  + +PSSFP+E+LD                
Sbjct: 121 --TATNDDDDGGNGNRISRKRRTKNCNRRVEEKSPSSFPIEILDLNVNYMGEKTMVVSMT 180

Query: 181 --RR--CYIEGCKVIESLELKIITVNSSVVANRLLNTVFVEAEEAEEEELKIKIERAIAA 219
             RR    ++ C+VIESL+LKII    +VVANRLLNT+F+EAE AEEEELKIKIE AIAA
Sbjct: 181 CERRNDAILKVCQVIESLKLKIIAA-XTVVANRLLNTLFLEAERAEEEELKIKIETAIAA 238

[Close]

BLAST of Sed0027332 vs. NCBI nr
Match: XP_008451133.1 (PREDICTED: transcription factor bHLH35-like isoform X2 [Cucumis melo])

HSP 1 Score: 253.8 bits (647), Expect = 1.3e-63
Identity = 156/249 (62.65%), Postives = 183/249 (73.49%), Query Frame = 0


Query: 1   MEDILDEYQSFWETDMFLQRDEMDSWVLDEAFYGCYDSSSPDGAALSSELDASKNILSER 60
           ME+ILDEY+ +WET+MFLQ +E DSW LDEAFYG YDSSSPDG    S L+ASKNILSER
Sbjct: 1   MENILDEYRYYWETNMFLQTEEFDSWGLDEAFYGSYDSSSPDGT--MSSLEASKNILSER 60

Query: 61  NRRKKLNDRLLSLRAVVPNITKMDKASIIKDAIEYIQELRDQEKRIKTEISDLESGKFNN 120
           NRRKKLNDRLL+LRAVVPNITKMDKASIIKDAIEYIQELR +E RI+TEIS+LESGKF  
Sbjct: 61  NRRKKLNDRLLALRAVVPNITKMDKASIIKDAIEYIQELRSEENRIETEISNLESGKFK- 120

Query: 121 GSTATNPLINDNGNGISANKR----TNRQTSDAPSSFPVELLDRRCYIEG---------- 180
            ST +N   +   N  +  KR    +NRQ  + P+SFP+E+LD      G          
Sbjct: 121 -STTSNEDDDRENNNRNTRKRGTKNSNRQLREKPTSFPIEILDLNVSYMGEKTMVVSMTC 180

Query: 181 ----------CKVIESLELKIITVNSSVVANRLLNTVFVEAEEAEEEELKIKIERAIAAI 224
                     C+VIESL+LKIIT N +VVANRLL+T+F+EAE AEEEELKIK+ +AIAAI
Sbjct: 181 ERRNDAVLKICQVIESLKLKIITANITVVANRLLSTLFLEAERAEEEELKIKLGKAIAAI 240

[Close]

BLAST of Sed0027332 vs. NCBI nr
Match: KAG6598898.1 (Transcription factor basic helix-loop-helix 35, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 251.9 bits (642), Expect = 5.1e-63
Identity = 150/240 (62.50%), Postives = 177/240 (73.75%), Query Frame = 0


Query: 1   MEDILDEYQSFWETDMFLQRDEMDSWVLDEAFYGCYDSSSPDGAALSSELDASKNILSER 60
           ME+ILDEYQ +WET+MFLQ +E DSW +DEAFYG YDSSSPDG    S L+ASKNILSER
Sbjct: 1   MENILDEYQYYWETNMFLQTEEFDSWGVDEAFYGSYDSSSPDGT--PSSLEASKNILSER 60

Query: 61  NRRKKLNDRLLSLRAVVPNITKMDKASIIKDAIEYIQELRDQEKRIKTEISDLESGKFNN 120
           NRRKKLNDRLL+LRAVVPNITKMDKASIIKDAIEYIQELR +EKRI+ EISDLESGK  N
Sbjct: 61  NRRKKLNDRLLALRAVVPNITKMDKASIIKDAIEYIQELRAEEKRIEAEISDLESGKIKN 120

Query: 121 GSTATNPLINDNGNGISANKRT--NRQTSDAPSSFPVELLDRRCYIEG------------ 180
            +T      N++ +GI   KRT  NRQ  + P SFP+E+LD R    G            
Sbjct: 121 RAT------NEDDDGILREKRTNKNRQVPEPPPSFPIEVLDLRVNYMGEKTMVVSLTCGR 180

Query: 181 --------CKVIESLELKIITVNSSVVANRLLNTVFVEAEEAEEEELKIKIERAIAAISE 219
                   C+VIESL++KIIT   ++VAN+LL T+F+E E AEEEE+K+KIE AIAAIS+
Sbjct: 181 RSDTIMKICQVIESLKMKIITATITIVANKLLITLFLEEETAEEEEVKVKIEAAIAAISD 232

[Close]

BLAST of Sed0027332 vs. NCBI nr
Match: XP_023521311.1 (transcription factor bHLH35-like [Cucurbita pepo subsp. pepo] >XP_023545431.1 transcription factor bHLH35-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 251.1 bits (640), Expect = 8.7e-63
Identity = 150/240 (62.50%), Postives = 177/240 (73.75%), Query Frame = 0


Query: 1   MEDILDEYQSFWETDMFLQRDEMDSWVLDEAFYGCYDSSSPDGAALSSELDASKNILSER 60
           ME+ILDEYQ +WET+MFLQ +E DSW +DEAFYG YDSSSPDG    S L+ASKNILSER
Sbjct: 1   MENILDEYQYYWETNMFLQTEEFDSWGVDEAFYGSYDSSSPDGT--PSSLEASKNILSER 60

Query: 61  NRRKKLNDRLLSLRAVVPNITKMDKASIIKDAIEYIQELRDQEKRIKTEISDLESGKFNN 120
           NRRKKLNDRLL+LRAVVPNITKMDKASIIKDAIEYIQELR +EKRI+ EISDLESGK  N
Sbjct: 61  NRRKKLNDRLLALRAVVPNITKMDKASIIKDAIEYIQELRAEEKRIEAEISDLESGKIKN 120

Query: 121 GSTATNPLINDNGNGISANKRT--NRQTSDAPSSFPVELLDRRCYIEG------------ 180
            +T      N++ +GI   KRT  NRQ  + P SFP+E+LD R    G            
Sbjct: 121 RAT------NEDDDGILREKRTNKNRQVPEPPPSFPIEVLDLRVNYMGEKTMVVSLTCGR 180

Query: 181 --------CKVIESLELKIITVNSSVVANRLLNTVFVEAEEAEEEELKIKIERAIAAISE 219
                   C+VIESL++KIIT   ++VAN+LL T+F+E E AEEEE+K+KIE AIAAIS+
Sbjct: 181 RSDTIMKICQVIESLKMKIITATITIVANKLLITLFLEEEIAEEEEVKVKIEAAIAAISD 232

[Close]

BLAST of Sed0027332 vs. NCBI nr
Match: XP_022996610.1 (transcription factor bHLH35-like [Cucurbita maxima])

HSP 1 Score: 250.8 bits (639), Expect = 1.1e-62
Identity = 150/240 (62.50%), Postives = 177/240 (73.75%), Query Frame = 0


Query: 1   MEDILDEYQSFWETDMFLQRDEMDSWVLDEAFYGCYDSSSPDGAALSSELDASKNILSER 60
           ME+ILDEYQ +WET+MFLQ +E DSW +DEAFYG YDSSSPDG    S L+ASKNILSER
Sbjct: 1   MENILDEYQYYWETNMFLQTEEFDSWGVDEAFYGSYDSSSPDGT--PSSLEASKNILSER 60

Query: 61  NRRKKLNDRLLSLRAVVPNITKMDKASIIKDAIEYIQELRDQEKRIKTEISDLESGKFNN 120
           NRRKKLNDRLL+LRAVVPNITKMDKASIIKDAIEYIQELR QEKRI+ EISDLESGK  N
Sbjct: 61  NRRKKLNDRLLALRAVVPNITKMDKASIIKDAIEYIQELRAQEKRIEEEISDLESGKIKN 120

Query: 121 GSTATNPLINDNGNGISANKRTNR--QTSDAPSSFPVELLDRRCYIEG------------ 180
            +T      N++ +GI   KRTN+  Q  + P SFP+E+LD R    G            
Sbjct: 121 RAT------NEDDDGILREKRTNKNGQVPEPPPSFPIEVLDLRVNCMGEKTMVVSLTCGR 180

Query: 181 --------CKVIESLELKIITVNSSVVANRLLNTVFVEAEEAEEEELKIKIERAIAAISE 219
                   C+VIESL++KIIT   ++VAN+LL T+F+E E AEEEE+K+KIE AIAAIS+
Sbjct: 181 RSDTIMKICQVIESLKMKIITATITIVANKLLITLFLEEEIAEEEEVKVKIEAAIAAISD 232

[Close]

BLAST of Sed0027332 vs. ExPASy Swiss-Prot
Match: Q2HIV9 (Transcription factor bHLH35 OS=Arabidopsis thaliana OX=3702 GN=BHLH35 PE=2 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 6.5e-37
Identity = 106/242 (43.80%), Postives = 148/242 (61.16%), Query Frame = 0


Query: 1   MEDILD-EYQSFWETDMFLQRDEMD---SWVLDEAFYGCYDSSSPDGAALSSELDASKNI 60
           MEDI+D E  ++WE   FLQ ++ +   SW L+EA  G YDSSSPDGAA S    ASKNI
Sbjct: 1   MEDIVDQELSNYWEPSSFLQNEDFEYDRSWPLEEAISGSYDSSSPDGAASS---PASKNI 60

Query: 61  LSERNRRKKLNDRLLSLRAVVPNITKMDKASIIKDAIEYIQELRDQEKRIKTEISDLESG 120
           +SERNRR+KLN RL +LR+VVPNITKMDKASIIKDAI YI+ L+ +EK+++ EI +LES 
Sbjct: 61  VSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRELEST 120

Query: 121 KFNNGSTATNPLINDNGNGISANKRTNRQTSDAPSSFPVELLDRRCYIEG---------- 180
             ++ S + +    D    +    +  +Q     S+  +E+L+ +    G          
Sbjct: 121 PKSSLSFSKD---FDRDLLVPVTSKKMKQLDSGSSTSLIEVLELKVTFMGERTMVVSVTC 180

Query: 181 ----------CKVIESLELKIITVNSSVVANRLLNTVFVEAEEAEEEELKIKIERAIAAI 219
                     C+V ESL LKI+T N +  +  + +TVF+EA+E E+E L++KIE  I A 
Sbjct: 181 NKRTDTMVKLCEVFESLNLKILTSNLTSFSGMIFHTVFIEADEEEQEVLRLKIETGIGAY 236

[Close]

BLAST of Sed0027332 vs. ExPASy Swiss-Prot
Match: Q700E3 (Transcription factor bHLH27 OS=Arabidopsis thaliana OX=3702 GN=BHLH27 PE=2 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.4e-34
Identity = 97/232 (41.81%), Postives = 137/232 (59.05%), Query Frame = 0


Query: 1   MEDILDEYQSFWETDMFLQRDEM--DSWVLDEAFYGCYDSSSPDGAALSSELDASKNILS 60
           MED+  EY+++WET MF Q  E+  DSW ++EAF G  +SSSPDGAA S    +SKN++S
Sbjct: 1   MEDLDHEYKNYWETTMFFQNQELEFDSWPMEEAFSGSGESSSPDGAATSPA--SSKNVVS 60

Query: 61  ERNRRKKLNDRLLSLRAVVPNITKMDKASIIKDAIEYIQELRDQEKRIKTEISDLESGKF 120
           ERNRR+KLN RL +LR+VVPNI+K+DKAS+IKD+I+Y+QEL DQEK ++ EI +LES   
Sbjct: 61  ERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRELES--- 120

Query: 121 NNGSTATNPL--------------INDNGNGISANKRTNRQTSDAPSSFPVELLD----- 180
              +   NP+               +DN N + + K      S     +P+E+L+     
Sbjct: 121 -RSTLLENPVRDYDCNFAETHLQDFSDN-NDMRSKKFKQMDYSTRVQHYPIEVLEMKVTW 180

Query: 181 ---------------RRCYIEGCKVIESLELKIITVNSSVVANRLLNTVFVE 197
                          R   ++ CKV+ESL L I+T N S   +RL  T+F++
Sbjct: 181 MGEKTVVVCITCSKKRETMVQLCKVLESLNLNILTTNFSSFTSRLSTTLFLQ 225

[Close]

BLAST of Sed0027332 vs. ExPASy Swiss-Prot
Match: Q0JEB7 (Transcription factor BHLH6 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH6 PE=1 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 7.8e-22
Identity = 91/290 (31.38%), Postives = 141/290 (48.62%), Query Frame = 0


Query: 6   DEYQSFWETDMFLQRDEMDSWVLDEAFYGCYDSSSPDGAALSSEL--------------- 65
           + +  +WET  +L+ +E+DS  L       Y+SSSPDG+  SS                 
Sbjct: 9   ESFAYYWETQRYLESEELDSMYLPTQDDSNYESSSPDGSHSSSAPAPAAVGGDAAAAVAG 68

Query: 66  ---------------------DASKNILSERNRRKKLNDRLLSLRAVVPNITKMDKASII 125
                                 A+KNIL ER+RR+KLN++L +LR+VVPNITKMDKASII
Sbjct: 69  SGGGMTTMMMGGGGGGGDDAGGANKNILMERDRRRKLNEKLYALRSVVPNITKMDKASII 128

Query: 126 KDAIEYIQELRDQEKRIKTEISDLESGKFNNGS-TATNPLIN---------DNGNGISAN 185
           KDAIEYIQ L+ +E+++  E++ LES    + +  A NP             + +  S++
Sbjct: 129 KDAIEYIQRLQAEEQQMLREVAALESAAAASAAPAAANPFAGLGADEEHEYGHHHPSSSS 188

Query: 186 KRTNR--------QTSD-----APSSFPVELLDRRCYIEG-------------------- 217
           +RT +          SD     A  + PVE+ + R    G                    
Sbjct: 189 ERTKKVKRALSVSSISDALLAAAAPAPPVEIQELRVSEVGDRVLVVSVTCSKRRDAMARV 248

[Close]

BLAST of Sed0027332 vs. ExPASy Swiss-Prot
Match: Q0V7X4 (Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR OS=Arabidopsis thaliana OX=3702 GN=FIT PE=1 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.1e-12
Identity = 42/97 (43.30%), Postives = 65/97 (67.01%), Query Frame = 0


Query: 29  DEAFYGCYDSSSP----DGAALSSELDASKNILSERNRRKKLNDRLLSLRAVVPNITKMD 88
           DE  Y   D SS     +     ++ D S+ ++SER RR ++ D+L +LR++VPNITKMD
Sbjct: 102 DEEDYNDGDDSSATTTNNDGTRKTKTDRSRTLISERRRRGRMKDKLYALRSLVPNITKMD 161

Query: 89  KASIIKDAIEYIQELRDQEKRIKTEISDLESGKFNNG 122
           KASI+ DA+ Y+QEL+ Q K++K++I+ LE+   + G
Sbjct: 162 KASIVGDAVLYVQELQSQAKKLKSDIAGLEASLNSTG 198

[Close]

BLAST of Sed0027332 vs. ExPASy Swiss-Prot
Match: A0A0N7KIY3 (Transcription factor BHLH156 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH156 PE=1 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 9.5e-12
Identity = 36/76 (47.37%), Postives = 54/76 (71.05%), Query Frame = 0


Query: 42  DGAALSSELDASKNILSERNRRKKLNDRLLSLRAVVPNITKMDKASIIKDAIEYIQELRD 101
           D +A     D SK I+SER RR ++ ++L  LRA+VPNITKMDKASII DA+ Y+++L+ 
Sbjct: 122 DNSATRKRRDRSKTIVSERKRRVRMKEKLYELRALVPNITKMDKASIIADAVVYVKDLQA 181

Query: 102 QEKRIKTEISDLESGK 118
             +++K E++ LE  +
Sbjct: 182 HARKLKEEVAALEEAR 197

[Close]

BLAST of Sed0027332 vs. ExPASy TrEMBL
Match: A0A1S3BQT4 (transcription factor bHLH35-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492501 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 6.5e-64
Identity = 156/249 (62.65%), Postives = 183/249 (73.49%), Query Frame = 0


Query: 1   MEDILDEYQSFWETDMFLQRDEMDSWVLDEAFYGCYDSSSPDGAALSSELDASKNILSER 60
           ME+ILDEY+ +WET+MFLQ +E DSW LDEAFYG YDSSSPDG    S L+ASKNILSER
Sbjct: 1   MENILDEYRYYWETNMFLQTEEFDSWGLDEAFYGSYDSSSPDGT--MSSLEASKNILSER 60

Query: 61  NRRKKLNDRLLSLRAVVPNITKMDKASIIKDAIEYIQELRDQEKRIKTEISDLESGKFNN 120
           NRRKKLNDRLL+LRAVVPNITKMDKASIIKDAIEYIQELR +E RI+TEIS+LESGKF  
Sbjct: 61  NRRKKLNDRLLALRAVVPNITKMDKASIIKDAIEYIQELRSEENRIETEISNLESGKFK- 120

Query: 121 GSTATNPLINDNGNGISANKR----TNRQTSDAPSSFPVELLDRRCYIEG---------- 180
            ST +N   +   N  +  KR    +NRQ  + P+SFP+E+LD      G          
Sbjct: 121 -STTSNEDDDRENNNRNTRKRGTKNSNRQLREKPTSFPIEILDLNVSYMGEKTMVVSMTC 180

Query: 181 ----------CKVIESLELKIITVNSSVVANRLLNTVFVEAEEAEEEELKIKIERAIAAI 224
                     C+VIESL+LKIIT N +VVANRLL+T+F+EAE AEEEELKIK+ +AIAAI
Sbjct: 181 ERRNDAVLKICQVIESLKLKIITANITVVANRLLSTLFLEAERAEEEELKIKLGKAIAAI 240

[Close]

BLAST of Sed0027332 vs. ExPASy TrEMBL
Match: A0A6J1K7A8 (transcription factor bHLH35-like OS=Cucurbita maxima OX=3661 GN=LOC111491799 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 5.5e-63
Identity = 150/240 (62.50%), Postives = 177/240 (73.75%), Query Frame = 0


Query: 1   MEDILDEYQSFWETDMFLQRDEMDSWVLDEAFYGCYDSSSPDGAALSSELDASKNILSER 60
           ME+ILDEYQ +WET+MFLQ +E DSW +DEAFYG YDSSSPDG    S L+ASKNILSER
Sbjct: 1   MENILDEYQYYWETNMFLQTEEFDSWGVDEAFYGSYDSSSPDGT--PSSLEASKNILSER 60

Query: 61  NRRKKLNDRLLSLRAVVPNITKMDKASIIKDAIEYIQELRDQEKRIKTEISDLESGKFNN 120
           NRRKKLNDRLL+LRAVVPNITKMDKASIIKDAIEYIQELR QEKRI+ EISDLESGK  N
Sbjct: 61  NRRKKLNDRLLALRAVVPNITKMDKASIIKDAIEYIQELRAQEKRIEEEISDLESGKIKN 120

Query: 121 GSTATNPLINDNGNGISANKRTNR--QTSDAPSSFPVELLDRRCYIEG------------ 180
            +T      N++ +GI   KRTN+  Q  + P SFP+E+LD R    G            
Sbjct: 121 RAT------NEDDDGILREKRTNKNGQVPEPPPSFPIEVLDLRVNCMGEKTMVVSLTCGR 180

Query: 181 --------CKVIESLELKIITVNSSVVANRLLNTVFVEAEEAEEEELKIKIERAIAAISE 219
                   C+VIESL++KIIT   ++VAN+LL T+F+E E AEEEE+K+KIE AIAAIS+
Sbjct: 181 RSDTIMKICQVIESLKMKIITATITIVANKLLITLFLEEEIAEEEEVKVKIEAAIAAISD 232

[Close]

BLAST of Sed0027332 vs. ExPASy TrEMBL
Match: A0A6J1EPK8 (transcription factor bHLH35-like OS=Cucurbita moschata OX=3662 GN=LOC111436215 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 1.2e-62
Identity = 149/240 (62.08%), Postives = 177/240 (73.75%), Query Frame = 0


Query: 1   MEDILDEYQSFWETDMFLQRDEMDSWVLDEAFYGCYDSSSPDGAALSSELDASKNILSER 60
           ME+ILDEYQ +WET+MFLQ +E DSW +DEAFYG YDSSSPDG    S L+ASKNI+SER
Sbjct: 1   MENILDEYQYYWETNMFLQTEEFDSWGVDEAFYGSYDSSSPDGT--PSSLEASKNIMSER 60

Query: 61  NRRKKLNDRLLSLRAVVPNITKMDKASIIKDAIEYIQELRDQEKRIKTEISDLESGKFNN 120
           NRRKKLNDRLL+LRAVVPNITKMDKASIIKDAIEYIQELR +EKRI+ EISDLESGK  N
Sbjct: 61  NRRKKLNDRLLALRAVVPNITKMDKASIIKDAIEYIQELRAEEKRIEAEISDLESGKIKN 120

Query: 121 GSTATNPLINDNGNGISANKRT--NRQTSDAPSSFPVELLDRRCYIEG------------ 180
            +T      N++ +GI   KRT  NRQ  + P SFP+E+LD R    G            
Sbjct: 121 RAT------NEDYDGILREKRTNKNRQVPEPPPSFPIEVLDLRVNYMGEKTMMVSLTCER 180

Query: 181 --------CKVIESLELKIITVNSSVVANRLLNTVFVEAEEAEEEELKIKIERAIAAISE 219
                   C+VIESL++KIIT   ++VAN+LL T+F+E E AEEEE+K+KIE AIAAIS+
Sbjct: 181 RSDTIMKICQVIESLKMKIITATITIVANKLLITLFLEEEIAEEEEVKVKIEAAIAAISD 232

[Close]

BLAST of Sed0027332 vs. ExPASy TrEMBL
Match: A0A1S3BQS9 (transcription factor bHLH35-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492501 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 2.7e-62
Identity = 156/252 (61.90%), Postives = 183/252 (72.62%), Query Frame = 0


Query: 1   MEDILDEYQSFWETDMFLQRDEMD---SWVLDEAFYGCYDSSSPDGAALSSELDASKNIL 60
           ME+ILDEY+ +WET+MFLQ +E D   SW LDEAFYG YDSSSPDG    S L+ASKNIL
Sbjct: 1   MENILDEYRYYWETNMFLQTEEFDRNFSWGLDEAFYGSYDSSSPDGT--MSSLEASKNIL 60

Query: 61  SERNRRKKLNDRLLSLRAVVPNITKMDKASIIKDAIEYIQELRDQEKRIKTEISDLESGK 120
           SERNRRKKLNDRLL+LRAVVPNITKMDKASIIKDAIEYIQELR +E RI+TEIS+LESGK
Sbjct: 61  SERNRRKKLNDRLLALRAVVPNITKMDKASIIKDAIEYIQELRSEENRIETEISNLESGK 120

Query: 121 FNNGSTATNPLINDNGNGISANKR----TNRQTSDAPSSFPVELLDRRCYIEG------- 180
           F   ST +N   +   N  +  KR    +NRQ  + P+SFP+E+LD      G       
Sbjct: 121 FK--STTSNEDDDRENNNRNTRKRGTKNSNRQLREKPTSFPIEILDLNVSYMGEKTMVVS 180

Query: 181 -------------CKVIESLELKIITVNSSVVANRLLNTVFVEAEEAEEEELKIKIERAI 224
                        C+VIESL+LKIIT N +VVANRLL+T+F+EAE AEEEELKIK+ +AI
Sbjct: 181 MTCERRNDAVLKICQVIESLKLKIITANITVVANRLLSTLFLEAERAEEEELKIKLGKAI 240

[Close]

BLAST of Sed0027332 vs. ExPASy TrEMBL
Match: A0A6J1FCT5 (transcription factor bHLH35-like OS=Cucurbita moschata OX=3662 GN=LOC111444452 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 9.1e-58
Identity = 143/237 (60.34%), Postives = 170/237 (71.73%), Query Frame = 0


Query: 1   MEDILDEYQSFWETDMFLQRDEMDS--WVLDEAFYGCYDSSSPDG-AALSSELDASKNIL 60
           M++ILDEY  +WETDMFL  ++  S  W L+EAFY  Y+SSSPDG  + SS  +ASKNI+
Sbjct: 1   MDNILDEYLKYWETDMFLLTEDSGSGGWGLEEAFYSAYNSSSPDGKVSPSSPSEASKNIV 60

Query: 61  SERNRRKKLNDRLLSLRAVVPNITKMDKASIIKDAIEYIQELRDQEKRIKTEISDLESGK 120
           SERNRRKKLNDRL++LRAVVPNITKMDKASIIKDAI YIQELR +EKRI+TEISDLES  
Sbjct: 61  SERNRRKKLNDRLIALRAVVPNITKMDKASIIKDAIVYIQELRAEEKRIETEISDLESSV 120

Query: 121 FNNGSTATNPLINDNGNGISANKRTNRQTSDAPSSFPVELLDRRCYIEGCK--------- 180
            NNGS  TN   ++NG+ I  N + NRQT+DA SS  +E+LD      G K         
Sbjct: 121 NNNGSRTTNQWNDENGDRIWTNMKWNRQTTDASSSSSIEVLDLSVNYVGEKVMVVSLTCL 180

Query: 181 -----------VIESLELKIITVNSSVVANRLLNTVFVEAEEAEEEELKIKIERAIA 215
                      VIESL+LKIIT N SV AN+LLNT+F+EAE  EEEELK++IE AIA
Sbjct: 181 RRGNTILKVWEVIESLKLKIITANISVFANKLLNTLFIEAEREEEEELKVQIETAIA 237

[Close]

BLAST of Sed0027332 vs. TAIR 10
Match: AT4G29930.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 161.0 bits (406), Expect = 1.1e-39
Identity = 106/254 (41.73%), Postives = 152/254 (59.84%), Query Frame = 0


Query: 1   MEDILDEYQSFWETDMFLQRDEM--DSWVLDEAFYGCYDSSSPDGAALSSELDASKNILS 60
           MED+  EY+++WET MF Q  E+  DSW ++EAF G  +SSSPDGAA S    +SKN++S
Sbjct: 1   MEDLDHEYKNYWETTMFFQNQELEFDSWPMEEAFSGSGESSSPDGAATSPA--SSKNVVS 60

Query: 61  ERNRRKKLNDRLLSLRAVVPNITKMDKASIIKDAIEYIQELRDQEKRIKTEISDLESGKF 120
           ERNRR+KLN RL +LR+VVPNI+K+DKAS+IKD+I+Y+QEL DQEK ++ EI +LES   
Sbjct: 61  ERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRELES--- 120

Query: 121 NNGSTATNPL--------------INDNGNGISANKRTNRQTSDAPSSFPVELLD----- 180
              +   NP+               +DN N + + K      S     +P+E+L+     
Sbjct: 121 -RSTLLENPVRDYDCNFAETHLQDFSDN-NDMRSKKFKQMDYSTRVQHYPIEVLEMKVTW 180

Query: 181 ---------------RRCYIEGCKVIESLELKIITVNSSVVANRLLNTVFVEAEEAEEEE 219
                          R   ++ CKV+ESL L I+T N S   +RL  T+F++A+E E   
Sbjct: 181 MGEKTVVVCITCSKKRETMVQLCKVLESLNLNILTTNFSSFTSRLSTTLFLQADEEESSA 240

[Close]

BLAST of Sed0027332 vs. TAIR 10
Match: AT5G57150.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 158.3 bits (399), Expect = 7.2e-39
Identity = 108/241 (44.81%), Postives = 148/241 (61.41%), Query Frame = 0


Query: 1   MEDILD-EYQSFWETDMFLQRD--EMDSWVLDEAFYGCYDSSSPDGAALSSELDASKNIL 60
           MEDI+D E  ++WE   FLQ +  E DSW L+EA  G YDSSSPDGAA S    ASKNI+
Sbjct: 1   MEDIVDQELSNYWEPSSFLQNEDFEYDSWPLEEAISGSYDSSSPDGAASS---PASKNIV 60

Query: 61  SERNRRKKLNDRLLSLRAVVPNITKMDKASIIKDAIEYIQELRDQEKRIKTEISDLESGK 120
           SERNRR+KLN RL +LR+VVPNITKMDKASIIKDAI YI+ L+ +EK+++ EI +LES  
Sbjct: 61  SERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRELESTP 120

Query: 121 FNNGSTATNPLINDNGNGISANKRTNRQTSDAPSSFPVELLDRRCYIEG----------- 180
            ++ S + +    D    +    +  +Q     S+  +E+L+ +    G           
Sbjct: 121 KSSLSFSKD---FDRDLLVPVTSKKMKQLDSGSSTSLIEVLELKVTFMGERTMVVSVTCN 180

Query: 181 ---------CKVIESLELKIITVNSSVVANRLLNTVFVEAEEAEEEELKIKIERAIAAIS 219
                    C+V ESL LKI+T N +  +  + +TVF+EA+E E+E L++KIE  I A +
Sbjct: 181 KRTDTMVKLCEVFESLNLKILTSNLTSFSGMIFHTVFIEADEEEQEVLRLKIETGIGAYN 235

[Close]

BLAST of Sed0027332 vs. TAIR 10
Match: AT4G29930.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 153.7 bits (387), Expect = 1.8e-37
Identity = 100/224 (44.64%), Postives = 143/224 (63.84%), Query Frame = 0


Query: 1   MEDILDEYQSFWETDMFLQRDEM--DSWVLDEAFYGCYDSSSPDGAALSSELDASKNILS 60
           MED+  EY+++WET MF Q  E+  DSW ++EAF G  +SSSPDGAA S    +SKN++S
Sbjct: 1   MEDLDHEYKNYWETTMFFQNQELEFDSWPMEEAFSGSGESSSPDGAATSPA--SSKNVVS 60

Query: 61  ERNRRKKLNDRLLSLRAVVPNITKMDKASIIKDAIEYIQELRDQEKRIKTEISDLESGKF 120
           ERNRR+KLN RL +LR+VVPNI+K+DKAS+IKD+I+Y+QEL DQEK ++ EI +LES   
Sbjct: 61  ERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRELES--- 120

Query: 121 NNGSTATNPL-INDNGNGISANKRTNRQTSDAPSSFPVELL---DRRCYIEGCKVIESLE 180
              +   NP+  +             + T     +  V +     R   ++ CKV+ESL 
Sbjct: 121 -RSTLLENPMDYSTRVQHYPIEVLEMKVTWMGEKTVVVCITCSKKRETMVQLCKVLESLN 180

Query: 181 LKIITVNSSVVANRLLNTVFVEAEEAEEEELKIKIERAIAAISE 219
           L I+T N S   +RL  T+F++A+E E   ++ KI+ AIAA ++
Sbjct: 181 LNILTTNFSSFTSRLSTTLFLQADEEESSAVEAKIQMAIAAYND 218

[Close]

BLAST of Sed0027332 vs. TAIR 10
Match: AT4G29930.3 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 147.9 bits (372), Expect = 9.7e-36
Identity = 97/232 (41.81%), Postives = 137/232 (59.05%), Query Frame = 0


Query: 1   MEDILDEYQSFWETDMFLQRDEM--DSWVLDEAFYGCYDSSSPDGAALSSELDASKNILS 60
           MED+  EY+++WET MF Q  E+  DSW ++EAF G  +SSSPDGAA S    +SKN++S
Sbjct: 1   MEDLDHEYKNYWETTMFFQNQELEFDSWPMEEAFSGSGESSSPDGAATSPA--SSKNVVS 60

Query: 61  ERNRRKKLNDRLLSLRAVVPNITKMDKASIIKDAIEYIQELRDQEKRIKTEISDLESGKF 120
           ERNRR+KLN RL +LR+VVPNI+K+DKAS+IKD+I+Y+QEL DQEK ++ EI +LES   
Sbjct: 61  ERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRELES--- 120

Query: 121 NNGSTATNPL--------------INDNGNGISANKRTNRQTSDAPSSFPVELLD----- 180
              +   NP+               +DN N + + K      S     +P+E+L+     
Sbjct: 121 -RSTLLENPVRDYDCNFAETHLQDFSDN-NDMRSKKFKQMDYSTRVQHYPIEVLEMKVTW 180

Query: 181 ---------------RRCYIEGCKVIESLELKIITVNSSVVANRLLNTVFVE 197
                          R   ++ CKV+ESL L I+T N S   +RL  T+F++
Sbjct: 181 MGEKTVVVCITCSKKRETMVQLCKVLESLNLNILTTNFSSFTSRLSTTLFLQ 225

[Close]

BLAST of Sed0027332 vs. TAIR 10
Match: AT5G57150.3 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 138.3 bits (347), Expect = 7.7e-33
Identity = 95/220 (43.18%), Postives = 132/220 (60.00%), Query Frame = 0


Query: 1   MEDILD-EYQSFWETDMFLQRDEMD---SWVLDEAFYGCYDSSSPDGAALSSELDASKNI 60
           MEDI+D E  ++WE   FLQ ++ +   SW L+EA  G YDSSSPDGAA S    ASKNI
Sbjct: 1   MEDIVDQELSNYWEPSSFLQNEDFEYDRSWPLEEAISGSYDSSSPDGAASS---PASKNI 60

Query: 61  LSERNRRKKLNDRLLSLRAVVPNITKMDKASIIKDAIEYIQELRDQEKRIKTEISDLESG 120
           +SERNRR+KLN RL +LR+VVPNITKMDKASIIKDAI YI+ L+ +EK+++ EI +LES 
Sbjct: 61  VSERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRELEST 120

Query: 121 KFNNGSTATNPLINDNGNGISANKRTNRQTSDAPSSFPVELLDRRCYIEG---------- 180
             ++ S + +    D    +    +  +Q     S+  +E+L+ +    G          
Sbjct: 121 PKSSLSFSKD---FDRDLLVPVTSKKMKQLDSGSSTSLIEVLELKVTFMGERTMVVSVTC 180

Query: 181 ----------CKVIESLELKIITVNSSVVANRLLNTVFVE 197
                     C+V ESL LKI+T N +  +  + +TVF+E
Sbjct: 181 NKRTDTMVKLCEVFESLNLKILTSNLTSFSGMIFHTVFIE 214

The following BLAST results are available for this feature:

BLAST of Sed0027332 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889762.1	3.5e-64	66.67	LOW QUALITY PROTEIN: transcription factor bHLH35-like [Benincasa hispida]	[more]
XP_008451133.1	1.3e-63	62.65	PREDICTED: transcription factor bHLH35-like isoform X2 [Cucumis melo]	[more]
KAG6598898.1	5.1e-63	62.50	Transcription factor basic helix-loop-helix 35, partial [Cucurbita argyrosperma ...	[more]
XP_023521311.1	8.7e-63	62.50	transcription factor bHLH35-like [Cucurbita pepo subsp. pepo] >XP_023545431.1 tr...	[more]
XP_022996610.1	1.1e-62	62.50	transcription factor bHLH35-like [Cucurbita maxima]	[more]

BLAST of Sed0027332 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2HIV9	6.5e-37	43.80	Transcription factor bHLH35 OS=Arabidopsis thaliana OX=3702 GN=BHLH35 PE=2 SV=1	[more]
Q700E3	1.4e-34	41.81	Transcription factor bHLH27 OS=Arabidopsis thaliana OX=3702 GN=BHLH27 PE=2 SV=1	[more]
Q0JEB7	7.8e-22	31.38	Transcription factor BHLH6 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH6 PE=...	[more]
Q0V7X4	1.1e-12	43.30	Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR OS=Ar...	[more]
A0A0N7KIY3	9.5e-12	47.37	Transcription factor BHLH156 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH156...	[more]

BLAST of Sed0027332 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BQT4	6.5e-64	62.65	transcription factor bHLH35-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492...	[more]
A0A6J1K7A8	5.5e-63	62.50	transcription factor bHLH35-like OS=Cucurbita maxima OX=3661 GN=LOC111491799 PE=...	[more]
A0A6J1EPK8	1.2e-62	62.08	transcription factor bHLH35-like OS=Cucurbita moschata OX=3662 GN=LOC111436215 P...	[more]
A0A1S3BQS9	2.7e-62	61.90	transcription factor bHLH35-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492...	[more]
A0A6J1FCT5	9.1e-58	60.34	transcription factor bHLH35-like OS=Cucurbita moschata OX=3662 GN=LOC111444452 P...	[more]

BLAST of Sed0027332 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29930.1	1.1e-39	41.73	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G57150.1	7.2e-39	44.81	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G29930.2	1.8e-37	44.64	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G29930.3	9.7e-36	41.81	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G57150.3	7.7e-33	43.18	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 195..215
None	No IPR available	COILS	Coil	Coil	coord: 89..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..151
None	No IPR available	PANTHER	PTHR31945	TRANSCRIPTION FACTOR SCREAM2-RELATED	coord: 1..152
None	No IPR available	PANTHER	PTHR31945:SF26	TRANSCRIPTION FACTOR BHLH35	coord: 1..152
None	No IPR available	PANTHER	PTHR31945	TRANSCRIPTION FACTOR SCREAM2-RELATED	coord: 165..218
None	No IPR available	PANTHER	PTHR31945:SF26	TRANSCRIPTION FACTOR BHLH35	coord: 165..218
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 56..105 e-value: 3.1E-14 score: 63.3
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 57..99 e-value: 6.8E-11 score: 42.0
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 50..99 score: 15.922901
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 47..116 e-value: 6.3E-17 score: 63.2
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 55..114

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0027332.1	Sed0027332.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046983	protein dimerization activity