Sed0027327 (gene) Chayote v1

Overview


Name	Sed0027327
Type	gene
Organism	Sechium edule (Chayote v1)
Description	ER membrane protein complex subunit 8/9 homolog
Location	LG03: 15402066 .. 15406504 (-)
RNA-Seq Expression	Sed0027327
Synteny	Sed0027327

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTTAACAAAAATTTTGTTTTGCTTTTTGGTTCTCCACTTCTCTTCTACAGTCCATCCGGCTTCATTGTTACTGTAAGCTCCGCCTCGTCGTTTTCCCTTTCATCGTCTCCTCCGGCGGAAACTCCGGCGATTCACCGACTCATGGGCGGCAGCGATCTACGCTTCGAGATCTCTCAAAATGCTTACATAAAGCTTGTTCTCCACGCCCTAAAGCACCGGACATCGGCAGTCAACGGAGTCCTCCTAGGTCGCGTCTCCGGCCCCAATGATATCGTCGAAATCGCCGATTCCGTCCCGCTCTTCCACTCCGCCATCGGCCTCCTCCCTCAGCTCGAAATCTCTCTCCTTCTGGTACGCTTTTTCAATGCTTTGCAGCCCAATTTCATAATTAGGGTTTTTCTGAATTTGTTGCGTTCTTCTTTACTTGCGTCTTTGAGATCTGTGTTTATTAGATAGTGTGGAGAAGTAGTCTAGATATGATACTGACATGTCCTTTCTAGTGACTCTTTTTGGGTCTCGTCAATCTTGGATCGGATCTCAATAACTATACTAGATAGTGTGAACATCGAAAAATCAATCGGTGATGTGGGATCCTAACATGCCTGTTCAAGATGGTGCAACTTTCGGGTTACATCAATCTTGAATATCCCAATTTTATTTTATTGGATGGAATAACGGTTTGGGCTTAATTGACTCTGATATCGATAGTGTGGACATCTATAATTGGTGATTGAGAATAATAGTCCACATATCTTATGAGTGGGATCCTAATAGTAATTGATGGAGTCTTTGAAATCAGATTGAAGAATATTATGCGGCTAAGGGATTGAGCATCGTGGGGTATTTTCATGCTAATGAGCGGTTTGATGACTATGAGGTTGGCGGTGTGGCTAAGAATATTTGTGATCATATTTCTAGATCTTTTCCTCATGCTGCTCTTCTTTTGGTAAGGAGATGTCTTTTTTTGTACTTTAGTTGTTTTGTTTTGTGTATTTCTGTTGTTTTTATTTTTGGTTCTCTGCAGTTAGATCACAGAAAACTTGAAGCTTTACCGAAGAGGAAGGATAGAAGCCCTGTAGTGGAGGTGTGTTTATCTGCTACAGAATTCTTATATCATGGTTTTGTTCATTGTGTTTGTGCGCTTTATTAGAATTGCCACTATAGTTTTCGCTTTTCATTCTGTTTCAATATCATTAAAACGAGAATGTTATAGCAAAAATGGAAATTTTAAATATTGTTGGTTGATGTTGATGCTGGTATGGCGAATTTTTCTTTTGGACCAACTAATTTGTTTAGTTCTTGTAGGACTGTGGAAGATCGTAAAAGAACTTTGTTACATTATTGATAATTCATTCATTTTGGGGGGACGTTCGTACAGTTTTACTAATTAATAGATCTGCAGAATATGGAAATGTCACAAAAAATGTAGGAGTCCTTTGACAATCTCTCTGTTACCTTCCAGTGGTGGAGGCTTGATATCATTATCTACTACTTATGCTATTTGAAATATCAGGAAAAGTATGTTTTTATTATAGGAAACAAAACCAATATCATTGTTAAATGAAAGAGTTTATAATGAATCTATTGCGAAATGAACAATAGGAAAGAAGATAGGAAATGAAATGGGGAGATATGAAGCCAACAATATGGGTCAAATTACGAAGGACATTATACAAAAGAAAAATAATAATTACAAGTCCAACACCGATAAAACAGAGAAATCCAAATAGAGCGATAGATACTCAGTGGAGGCTTTTTGCCGGTGAAGCATAGAGAGGGTTGGTGCTAAAGAAAGAGGTGGATATGCTACTCCTTCCAATGTTGGAGGAGGAAAGAGAGAGACGGAGTGAGGAGAGAGATCGGGGAACGAAGGAGAATGGGACGAGCAAAGATAATCGAGAGGGTTGACGACTGGCTAGGAGAGAGAGTGTTGGAGTCAGAGTAGGAGGAATGAAACGAACAACACTAGGGCTTTTTGTTGAGAGCGTTTAGTTACAGTTTTTAGAGAAATGACACTTTTAGTGTATAGATGGAATGATCAGTTGAAGAAAGAGAGCGATGATATTCAAGAAACACTATTTGTCTCATTCACTATCCTAAATATGATACCTGGTTCACAAACTTAGGAAATGTATGTTGGATATTTTCACTGACATTCTGTCTTGTTTATCTTAACTAGGAAGTGTATATTGGATATTTTCACTGACATTCTGTTTTGTTTATGTTTATCTTAAATACCAGCGTGTAATCAGACCCTTACACTCATTGAAAATTCATATCCCTTTTTAATGTTATCTGAAATTTGGTTAGCTTGTACTTCTTCTGCATTGGAATGGATGAAGTATGTGGATTTTTTTTTGGATAGGAAACTAAACTTTCATTGATAATATGAAAATGATAAAGATCCCATCGAAACAGTTGCAAAAAGCACCTCCATTGTGCGGTAAGGATTGTAAGACTATAATCACTAAAAGGCTTAATAAGATGGATCCAGAACAATGCAAGATCCTGTTATTTCTTTCCTAACAGGATCTTCAAAGCATCTTGTTGGAGGACCCTGTTTAGACCATTATCTCGATCACCATGGTTCAGGTTGGACCCATCAGTTTGCCCTCTCCCAACGTACATGTTTCCTTATTAGTTTTATTTTTGGTATCCATGACTGTACGGGCCAGCTTGTGTGCACCTCGACTAATGTCAAAGGAAATACCGCCTGAACCTACAACATTTAGATGTCAAGGAAACTCGTAGGAAATCATTTCTTAGGTAGGTGGCCACCATGGATTCAACTCATCATCTTTAGCACCCCAAGGCCCTCTTTGACCATTAGGCCACTCTTATTAGTACAATTGAACATACGATGTTCTGCATGGAATTTGAGGACGAATCTAGAAGATCCATTTTTTAATCATTAAAATTCTTTTGCTCAATTAAATGGATGGTGAGCCATTGGATTCCTCTTATAGTTTGGCCCCAACCACCTGAGTTTATGCATACGTTCTATATTAAAGGAGAATCGTAGGACCTATGTCATCGGAGGAACGTTTTTTATGAGGCGACAATGTAGTAGGTTTCTTTTTCTTTATCTCTTGTTTTTTTGGGGGCTCCTTGGACCCTAAACCAATTATCAGGAAGTGGATACTAGAAGCTATGGGGTATTCTATTGTAAATCTTAGTTAAGACTTACATTCTTGACTAAAAGTAAAAGATTTCAATCCGCACCCCCACATGACAAAAAAAAAAGATCAATCTATATGTTAGTGAGTTCAGCAAAACCAGGCGTATCCTTGACCTAGAGGTTGTAGGTTTGAATCTCTCTACCTCAATTAAATGTAAGTGAGCTCTAACCCAAAAGATAAAAAGATCTTGACAAAGCCAAATTCATTACTAAAGTTGATTATGGAAAGTGTGGCGAGTTGAAATTTACTTATTCATGGATTTTGAGTGTTTTTTTTTTTTTGGCTAGGATGGATCCTGATTGCTTCTAGTTCCAATCATATTCTAACTTTTTATCTCCCAAGTTACTATTTGCTGAGGTCTAAAATTGTGAATTGTGTTGTACGAAGCTTCTTTAAGATTTAGATATTATTTCATTTTCCCCATGACTGTGATTTCTGATGAACGATAATTCATTATCATGGCTATCTTTTGCTGCCACTCTTTGACACCTGACCAGCAATCATGTTACTTAAAAACCCTTTTAAACTATAGGAATTGTCTCTGTTGCTAGTTTTCACCATGAAATAAAGTAGCTAAGCATGCGATGTTATGAAGATGGTTGCATAATGCTCTTCTCATTCCGTTTTTCTCGTATTTTTTTTTCGACCAGCTATACACAAGGGAAACTTCCAAGAACTGGAAGCTAGCTGGTTCAGATGGAAGCGGCCAGCTAACGATCAAGGAACCATCAGCAAATGTGGTGCTGTTGGATTTCATGTCATCTGAAAAATGGCAAGATGTGGTGGATTTCGACGATCACCTCGACGACATTAGCAAGTACGACACACAACCTCCCCTCTGTTTTTTTAATACTACATCAATCAGATTTAATAGTTAAACCTTATGCTCTTAAACCTTGAAAATTTGCAGGAATTGGTTGAACCCAGACCTCTTCAAGTAGATGTTTTCCCATAGTTGCAAGGCTTTACTGTTCTTGGAAGGATTAGTTGGAGATTGGAGCCTTGTTCTTTTCAAGGGTCGAGAATATTGTTAGATGTAATGCTATTTAGTAATCGTCGAATTTTTATCATGTTAGACTTCGATTACTCGTCTTTTGATTCGAGATACTGAATAGAGAAGCCCTGTTTTTAGTGTTTTAAGTTAGGGGCGGATATTAAAGAAGTTTGTTGAATGTACTCTTAACATATTATGTCATTCTTTGGTTGAGAAGACAAATACCATAAGCATTGAGTATTAGATTATTTTTTATGTTTTGAA

mRNA sequence

AATTTAACAAAAATTTTGTTTTGCTTTTTGGTTCTCCACTTCTCTTCTACAGTCCATCCGGCTTCATTGTTACTGTAAGCTCCGCCTCGTCGTTTTCCCTTTCATCGTCTCCTCCGGCGGAAACTCCGGCGATTCACCGACTCATGGGCGGCAGCGATCTACGCTTCGAGATCTCTCAAAATGCTTACATAAAGCTTGTTCTCCACGCCCTAAAGCACCGGACATCGGCAGTCAACGGAGTCCTCCTAGGTCGCGTCTCCGGCCCCAATGATATCGTCGAAATCGCCGATTCCGTCCCGCTCTTCCACTCCGCCATCGGCCTCCTCCCTCAGCTCGAAATCTCTCTCCTTCTGATTGAAGAATATTATGCGGCTAAGGGATTGAGCATCGTGGGGTATTTTCATGCTAATGAGCGGTTTGATGACTATGAGGTTGGCGGTGTGGCTAAGAATATTTGTGATCATATTTCTAGATCTTTTCCTCATGCTGCTCTTCTTTTGTTAGATCACAGAAAACTTGAAGCTTTACCGAAGAGGAAGGATAGAAGCCCTGTAGTGGAGCTATACACAAGGGAAACTTCCAAGAACTGGAAGCTAGCTGGTTCAGATGGAAGCGGCCAGCTAACGATCAAGGAACCATCAGCAAATGTGGTGCTGTTGGATTTCATGTCATCTGAAAAATGGCAAGATGTGGTGGATTTCGACGATCACCTCGACGACATTAGCAAGAATTGGTTGAACCCAGACCTCTTCAAGTAGATGTTTTCCCATAGTTGCAAGGCTTTACTGTTCTTGGAAGGATTAGTTGGAGATTGGAGCCTTGTTCTTTTCAAGGGTCGAGAATATTGTTAGATGTAATGCTATTTAGTAATCGTCGAATTTTTATCATGTTAGACTTCGATTACTCGTCTTTTGATTCGAGATACTGAATAGAGAAGCCCTGTTTTTAGTGTTTTAAGTTAGGGGCGGATATTAAAGAAGTTTGTTGAATGTACTCTTAACATATTATGTCATTCTTTGGTTGAGAAGACAAATACCATAAGCATTGAGTATTAGATTATTTTTTATGTTTTGAA

Coding sequence (CDS)

ATGGGCGGCAGCGATCTACGCTTCGAGATCTCTCAAAATGCTTACATAAAGCTTGTTCTCCACGCCCTAAAGCACCGGACATCGGCAGTCAACGGAGTCCTCCTAGGTCGCGTCTCCGGCCCCAATGATATCGTCGAAATCGCCGATTCCGTCCCGCTCTTCCACTCCGCCATCGGCCTCCTCCCTCAGCTCGAAATCTCTCTCCTTCTGATTGAAGAATATTATGCGGCTAAGGGATTGAGCATCGTGGGGTATTTTCATGCTAATGAGCGGTTTGATGACTATGAGGTTGGCGGTGTGGCTAAGAATATTTGTGATCATATTTCTAGATCTTTTCCTCATGCTGCTCTTCTTTTGTTAGATCACAGAAAACTTGAAGCTTTACCGAAGAGGAAGGATAGAAGCCCTGTAGTGGAGCTATACACAAGGGAAACTTCCAAGAACTGGAAGCTAGCTGGTTCAGATGGAAGCGGCCAGCTAACGATCAAGGAACCATCAGCAAATGTGGTGCTGTTGGATTTCATGTCATCTGAAAAATGGCAAGATGTGGTGGATTTCGACGATCACCTCGACGACATTAGCAAGAATTGGTTGAACCCAGACCTCTTCAAGTAG

Protein sequence

MGGSDLRFEISQNAYIKLVLHALKHRTSAVNGVLLGRVSGPNDIVEIADSVPLFHSAIGLLPQLEISLLLIEEYYAAKGLSIVGYFHANERFDDYEVGGVAKNICDHISRSFPHAALLLLDHRKLEALPKRKDRSPVVELYTRETSKNWKLAGSDGSGQLTIKEPSANVVLLDFMSSEKWQDVVDFDDHLDDISKNWLNPDLFK

Homology

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BLAST of Sed0027327 vs. NCBI nr
Match: XP_038880935.1 (ER membrane protein complex subunit 8/9 homolog [Benincasa hispida])

HSP 1 Score: 385.2 bits (988), Expect = 3.5e-103
Identity = 188/202 (93.07%), Postives = 198/202 (98.02%), Query Frame = 0


Query: 3   GSDLRFEISQNAYIKLVLHALKHRTSAVNGVLLGRVSGPNDIVEIADSVPLFHSAIGLLP 62
           GSDLRFEISQNAYIKLVLHALKHRTSAVNGVLLGR+SGPND++EI+DSVPLFHS+IGLLP
Sbjct: 2   GSDLRFEISQNAYIKLVLHALKHRTSAVNGVLLGRISGPNDVIEISDSVPLFHSSIGLLP 61

Query: 63  QLEISLLLIEEYYAAKGLSIVGYFHANERFDDYEVGGVAKNICDHISRSFPHAALLLLDH 122
           QLEISLLLIEEYYAAKGL+IVGYFHANERFDDYEVGGVAKNI DHISR FPHAALLLLDH
Sbjct: 62  QLEISLLLIEEYYAAKGLNIVGYFHANERFDDYEVGGVAKNIGDHISRFFPHAALLLLDH 121

Query: 123 RKLEALPKRKDRSPVVELYTRETSKNWKLAGSDGSGQLTIKEPSANVVLLDFMSSEKWQD 182
           RKLE LPKRKDRSPV+ELYT+ETSKNWKLAGSDGS QLTIKEPSANVVLLDF+SSEKWQD
Sbjct: 122 RKLEVLPKRKDRSPVMELYTKETSKNWKLAGSDGSSQLTIKEPSANVVLLDFISSEKWQD 181

Query: 183 VVDFDDHLDDISKNWLNPDLFK 205
           VVDFDDHLDDISK+WLNPDLFK
Sbjct: 182 VVDFDDHLDDISKDWLNPDLFK 203

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BLAST of Sed0027327 vs. NCBI nr
Match: KAG6595444.1 (ER membrane protein complex subunit 8/9-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027444.1 ER membrane protein complex subunit 8/9-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 384.8 bits (987), Expect = 4.6e-103
Identity = 188/202 (93.07%), Postives = 197/202 (97.52%), Query Frame = 0


Query: 3   GSDLRFEISQNAYIKLVLHALKHRTSAVNGVLLGRVSGPNDIVEIADSVPLFHSAIGLLP 62
           G DLRFEISQNAYIKLVLHALKHRTSAVNGVLLGR+SG ND++EIA+SVPLFHS+IGLLP
Sbjct: 2   GGDLRFEISQNAYIKLVLHALKHRTSAVNGVLLGRISGSNDVIEIAESVPLFHSSIGLLP 61

Query: 63  QLEISLLLIEEYYAAKGLSIVGYFHANERFDDYEVGGVAKNICDHISRSFPHAALLLLDH 122
           QLEISLLLIEEYYAAKGLSIVGYFHANERFDDY+ GGVAKNI DHISRSFPHAALLLLDH
Sbjct: 62  QLEISLLLIEEYYAAKGLSIVGYFHANERFDDYDAGGVAKNIADHISRSFPHAALLLLDH 121

Query: 123 RKLEALPKRKDRSPVVELYTRETSKNWKLAGSDGSGQLTIKEPSANVVLLDFMSSEKWQD 182
           RKLEALPKRKDRSPVVELYTRETSKNWKLAGSDGS QLT+KEPSANVVLLDF+SSEKWQD
Sbjct: 122 RKLEALPKRKDRSPVVELYTRETSKNWKLAGSDGSSQLTMKEPSANVVLLDFISSEKWQD 181

Query: 183 VVDFDDHLDDISKNWLNPDLFK 205
           VVDFDDHLDDISK+WLNPDLFK
Sbjct: 182 VVDFDDHLDDISKDWLNPDLFK 203

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BLAST of Sed0027327 vs. NCBI nr
Match: XP_023518172.1 (ER membrane protein complex subunit 8/9 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 383.6 bits (984), Expect = 1.0e-102
Identity = 188/202 (93.07%), Postives = 197/202 (97.52%), Query Frame = 0


Query: 3   GSDLRFEISQNAYIKLVLHALKHRTSAVNGVLLGRVSGPNDIVEIADSVPLFHSAIGLLP 62
           G DLRFEISQNAYIKLVLHALKHRTSAVNGVLLGR+SG ND++EIA+SVPLFHS+IGLLP
Sbjct: 2   GGDLRFEISQNAYIKLVLHALKHRTSAVNGVLLGRISGSNDVIEIAESVPLFHSSIGLLP 61

Query: 63  QLEISLLLIEEYYAAKGLSIVGYFHANERFDDYEVGGVAKNICDHISRSFPHAALLLLDH 122
           QLEISLLLIEEYYAAKGLSIVGYFHANERFDDY+VGGVAKNI DHISRSFPHAALLLLDH
Sbjct: 62  QLEISLLLIEEYYAAKGLSIVGYFHANERFDDYDVGGVAKNIADHISRSFPHAALLLLDH 121

Query: 123 RKLEALPKRKDRSPVVELYTRETSKNWKLAGSDGSGQLTIKEPSANVVLLDFMSSEKWQD 182
           RKLEALPKRKDRSPVVELYTRETSKNWKLAGSDGS QLTIKEPSANVVLLDF+SSEKWQ 
Sbjct: 122 RKLEALPKRKDRSPVVELYTRETSKNWKLAGSDGSSQLTIKEPSANVVLLDFISSEKWQG 181

Query: 183 VVDFDDHLDDISKNWLNPDLFK 205
           V+DFDDHLDDISK+WLNPDLFK
Sbjct: 182 VMDFDDHLDDISKDWLNPDLFK 203

[Close]

BLAST of Sed0027327 vs. NCBI nr
Match: XP_022966460.1 (ER membrane protein complex subunit 8/9 homolog [Cucurbita maxima])

HSP 1 Score: 383.6 bits (984), Expect = 1.0e-102
Identity = 188/202 (93.07%), Postives = 197/202 (97.52%), Query Frame = 0


Query: 3   GSDLRFEISQNAYIKLVLHALKHRTSAVNGVLLGRVSGPNDIVEIADSVPLFHSAIGLLP 62
           G DLRFEISQNAYIKLVLHALKHRTSAVNGVLLGR+SG ND++EIA+SVPLFHS+IGLLP
Sbjct: 2   GGDLRFEISQNAYIKLVLHALKHRTSAVNGVLLGRISGSNDVIEIAESVPLFHSSIGLLP 61

Query: 63  QLEISLLLIEEYYAAKGLSIVGYFHANERFDDYEVGGVAKNICDHISRSFPHAALLLLDH 122
           QLEISLLLIEEYYAAKGLSIVGYFHAN RFDDY+VGGVAKNI DHISRSFPHAALLLLDH
Sbjct: 62  QLEISLLLIEEYYAAKGLSIVGYFHANVRFDDYDVGGVAKNIADHISRSFPHAALLLLDH 121

Query: 123 RKLEALPKRKDRSPVVELYTRETSKNWKLAGSDGSGQLTIKEPSANVVLLDFMSSEKWQD 182
           RKLEALPKRKDRSPVVELYTRETSKNWKLAGSDGS QLT+KEPSANVVLLDF+SSEKWQD
Sbjct: 122 RKLEALPKRKDRSPVVELYTRETSKNWKLAGSDGSSQLTMKEPSANVVLLDFISSEKWQD 181

Query: 183 VVDFDDHLDDISKNWLNPDLFK 205
           VVDFDDHLDDISK+WLNPDLFK
Sbjct: 182 VVDFDDHLDDISKDWLNPDLFK 203

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BLAST of Sed0027327 vs. NCBI nr
Match: XP_008455761.1 (PREDICTED: ER membrane protein complex subunit 8/9 homolog [Cucumis melo] >KAA0025782.1 ER membrane protein complex subunit 8/9-like protein [Cucumis melo var. makuwa] >TYK09673.1 ER membrane protein complex subunit 8/9-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 381.3 bits (978), Expect = 5.1e-102
Identity = 186/202 (92.08%), Postives = 197/202 (97.52%), Query Frame = 0


Query: 3   GSDLRFEISQNAYIKLVLHALKHRTSAVNGVLLGRVSGPNDIVEIADSVPLFHSAIGLLP 62
           G DLRFEISQNAYIKLVLHALKHR+SAVNGVLLGR+SGPND++EI+DSVPLFHS+IGLLP
Sbjct: 2   GGDLRFEISQNAYIKLVLHALKHRSSAVNGVLLGRISGPNDVIEISDSVPLFHSSIGLLP 61

Query: 63  QLEISLLLIEEYYAAKGLSIVGYFHANERFDDYEVGGVAKNICDHISRSFPHAALLLLDH 122
           QLEISLLLIEEYYAAKGL+IVGYFHANERFDDYEVGGVAKNI DHISR FPHAALLLLDH
Sbjct: 62  QLEISLLLIEEYYAAKGLNIVGYFHANERFDDYEVGGVAKNIGDHISRFFPHAALLLLDH 121

Query: 123 RKLEALPKRKDRSPVVELYTRETSKNWKLAGSDGSGQLTIKEPSANVVLLDFMSSEKWQD 182
           RKLEALPKRKDRSPV+ELYT+ETSKNWKLAGSDGS QL IKEPSANVVLLDF+SSEKWQD
Sbjct: 122 RKLEALPKRKDRSPVMELYTKETSKNWKLAGSDGSSQLMIKEPSANVVLLDFISSEKWQD 181

Query: 183 VVDFDDHLDDISKNWLNPDLFK 205
           VVDFDDHLDDISK+WLNPDLFK
Sbjct: 182 VVDFDDHLDDISKDWLNPDLFK 203

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BLAST of Sed0027327 vs. ExPASy Swiss-Prot
Match: Q9FG71 (ER membrane protein complex subunit 8/9 homolog OS=Arabidopsis thaliana OX=3702 GN=EMB2731 PE=2 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 2.9e-76
Identity = 136/200 (68.00%), Postives = 174/200 (87.00%), Query Frame = 0


Query: 5   DLRFEISQNAYIKLVLHALKHRTSAVNGVLLGRVSGPND-IVEIADSVPLFHSAIGLLPQ 64
           +L++EISQNAYIKLVLH+L+H+T+AVNGVL+GR+S  +D +VEI+DSVPLFHS + LLP 
Sbjct: 8   ELKYEISQNAYIKLVLHSLRHKTAAVNGVLVGRISPKDDGVVEISDSVPLFHSNLALLPP 67

Query: 65  LEISLLLIEEYYAAKGLSIVGYFHANERFDDYEVGGVAKNICDHISRSFPHAALLLLDHR 124
           LEISL++IEE+Y A+GLSIVGYFHANERFDD E+ GVAKNI DHISR FP A +LLL+++
Sbjct: 68  LEISLIMIEEHYVAQGLSIVGYFHANERFDDVELCGVAKNIGDHISRYFPQAPILLLNNK 127

Query: 125 KLEALPKRKDRSPVVELYTRETSKNWKLAGSDGSGQLTIKEPSANVVLLDFMSSEKWQDV 184
           KLEAL K K+RSPV++L  ++ SKNW++ G+DG  +L +KEPSANVVL D++SSEKW+DV
Sbjct: 128 KLEALSKGKERSPVMQLCVKDASKNWRVVGADGGSKLLLKEPSANVVLSDYISSEKWKDV 187

Query: 185 VDFDDHLDDISKNWLNPDLF 204
            D DDHLDD++K+WLNP LF
Sbjct: 188 TDVDDHLDDVTKDWLNPGLF 207

[Close]

BLAST of Sed0027327 vs. ExPASy Swiss-Prot
Match: Q9DB76 (ER membrane protein complex subunit 9 OS=Mus musculus OX=10090 GN=Emc9 PE=1 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.7e-23
Identity = 67/194 (34.54%), Postives = 104/194 (53.61%), Query Frame = 0


Query: 9   EISQNAYIKLVLHALKHRTSAVNGVLLGRVSGPNDIVEIADSVPLFHSAIGLLPQLEISL 68
           EIS  AY K+ LHA ++  +AVNG+LL   +G  + + + D VPLFHS + L   LE++L
Sbjct: 5   EISARAYGKMCLHASRYPHAAVNGLLLAPATGSGECLCLTDCVPLFHSHLALSVMLEVAL 64

Query: 69  LLIEEYYAAKGLSIVGYFHANERFDDYEVGGVAKNICDHISRSFPHAALLLLDHRKLEAL 128
             ++ + A  GL + GY+HAN   DD   G +A  I   I+  FP A L++LD++KL   
Sbjct: 65  NQVDVWGAQAGLVVAGYYHANAVLDDQSPGPLALKIAGRIAEFFPRAVLIMLDNKKLVTR 124

Query: 129 PKRKDRSPVVELYTRETSKNWKLAGSDGSGQLTIKEPSANVVLLDFMSSEKWQDVVDFDD 188
           P+     PV+ L     ++  +    D +  +      +  ++   +     Q +VDFD 
Sbjct: 125 PR---VPPVIVL----ENQGLQWVPKDKNLVMWRDWEESRQMVGALLEGRAHQHLVDFDC 184

Query: 189 HLDDISKNWLNPDL 203
           HLDDI ++W N  L
Sbjct: 185 HLDDIRQDWTNQRL 191

[Close]

BLAST of Sed0027327 vs. ExPASy Swiss-Prot
Match: Q5FVL2 (ER membrane protein complex subunit 8 OS=Rattus norvegicus OX=10116 GN=Emc8 PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.4e-22
Identity = 62/204 (30.39%), Postives = 100/204 (49.02%), Query Frame = 0


Query: 9   EISQNAYIKLVLHALKHRTSAVNGVLLG--------RVSGPNDIVEIADSVPLFHSAIGL 68
           +++  AY K+VLH  K+   AVNG+L+            G  +     D +PLFH  + L
Sbjct: 5   KLTTQAYCKMVLHGAKYPHCAVNGLLVAERQRPRKEHPPGAGNHTLFVDCIPLFHGTLAL 64

Query: 69  LPQLEISLLLIEEYYAAKGLSIVGYFHANERFDDYEVGGVAKNICDHISRSFPHAALLLL 128
            P LE++L LI+ +       I GY+ ANER  D     VA+ +   I+  F  AAL+++
Sbjct: 65  TPMLEVALTLIDSWCKDNSYVIAGYYQANERVKDASPNQVAEKVASRIAEGFSDAALIMV 124

Query: 129 DHRKLEALPKRKDRSPVVELYTRETSKNWKLAGSDGSGQLTIKEPSANVVLLDFMSSEKW 188
           D+ K          +P + +Y +  ++ W+    D         P A  +    + S  +
Sbjct: 125 DNAKF----TMDCAAPTIHVYEQHENR-WRC--RDPHHDYCEDWPEAQRISASLLDSRSY 184

Query: 189 QDVVDFDDHLDDISKNWLNPDLFK 205
           + +VDFD+HLDDI  +W NP++ K
Sbjct: 185 ETLVDFDNHLDDIRSDWTNPEINK 201

[Close]

BLAST of Sed0027327 vs. ExPASy Swiss-Prot
Match: O70378 (ER membrane protein complex subunit 8 OS=Mus musculus OX=10090 GN=Emc8 PE=1 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.4e-22
Identity = 62/204 (30.39%), Postives = 99/204 (48.53%), Query Frame = 0


Query: 9   EISQNAYIKLVLHALKHRTSAVNGVLLG--------RVSGPNDIVEIADSVPLFHSAIGL 68
           +++  AY K+VLH  K+   AVNG+L+            G        D +PLFH  + L
Sbjct: 5   KLTTQAYCKMVLHGAKYPHCAVNGLLVAERQRPRKEHPPGAGSHTLFVDCIPLFHGTLAL 64

Query: 69  LPQLEISLLLIEEYYAAKGLSIVGYFHANERFDDYEVGGVAKNICDHISRSFPHAALLLL 128
            P LE++L LI+ +       I GY+ ANER  D     VA+ +   I+  F  AAL+++
Sbjct: 65  TPMLEVALTLIDSWCKDNSYVIAGYYQANERVKDASPNQVAEKVASRIAEGFGDAALIMV 124

Query: 129 DHRKLEALPKRKDRSPVVELYTRETSKNWKLAGSDGSGQLTIKEPSANVVLLDFMSSEKW 188
           D+ K          +P + +Y +  ++ W+    D         P A  +    + S  +
Sbjct: 125 DNAKF----TMDCAAPTIHVYEQHENR-WRC--RDPHHDYCEDWPEAQRISASLLDSRSY 184

Query: 189 QDVVDFDDHLDDISKNWLNPDLFK 205
           + +VDFD+HLDDI  +W NP++ K
Sbjct: 185 ETLVDFDNHLDDIRSDWTNPEINK 201

[Close]

BLAST of Sed0027327 vs. ExPASy Swiss-Prot
Match: Q5U1W7 (ER membrane protein complex subunit 9 OS=Rattus norvegicus OX=10116 GN=Emc9 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.4e-22
Identity = 65/194 (33.51%), Postives = 103/194 (53.09%), Query Frame = 0


Query: 9   EISQNAYIKLVLHALKHRTSAVNGVLLGRVSGPNDIVEIADSVPLFHSAIGLLPQLEISL 68
           EIS  AY K+ LHA ++  +AVNG+LL   +   + + + D VPLFHS + L   LE++L
Sbjct: 5   EISARAYGKMCLHASRYPHAAVNGLLLAPATRSGECLCLTDCVPLFHSHLALSVMLEVAL 64

Query: 69  LLIEEYYAAKGLSIVGYFHANERFDDYEVGGVAKNICDHISRSFPHAALLLLDHRKLEAL 128
             ++ +    GL + GY+HAN   DD   G +A  I   I+  FP+A L++LD++KL   
Sbjct: 65  NQVDVWATQAGLVVAGYYHANAVLDDQSPGPLALKIAGRIAEFFPNAVLIMLDNKKLVTW 124

Query: 129 PKRKDRSPVVELYTRETSKNWKLAGSDGSGQLTIKEPSANVVLLDFMSSEKWQDVVDFDD 188
           P+     PV+ L     ++  +    D +  +      +  ++   +     Q +VDFD 
Sbjct: 125 PR---VPPVIVL----ENQGLQWVPKDKNLVMWRDWEESRQMVGALLEGRAHQHLVDFDC 184

Query: 189 HLDDISKNWLNPDL 203
           HLDDI ++W N  L
Sbjct: 185 HLDDIRQDWTNQRL 191

[Close]

BLAST of Sed0027327 vs. ExPASy TrEMBL
Match: A0A6J1HRP6 (ER membrane protein complex subunit 8/9 homolog OS=Cucurbita maxima OX=3661 GN=LOC111466107 PE=3 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 5.0e-103
Identity = 188/202 (93.07%), Postives = 197/202 (97.52%), Query Frame = 0


Query: 3   GSDLRFEISQNAYIKLVLHALKHRTSAVNGVLLGRVSGPNDIVEIADSVPLFHSAIGLLP 62
           G DLRFEISQNAYIKLVLHALKHRTSAVNGVLLGR+SG ND++EIA+SVPLFHS+IGLLP
Sbjct: 2   GGDLRFEISQNAYIKLVLHALKHRTSAVNGVLLGRISGSNDVIEIAESVPLFHSSIGLLP 61

Query: 63  QLEISLLLIEEYYAAKGLSIVGYFHANERFDDYEVGGVAKNICDHISRSFPHAALLLLDH 122
           QLEISLLLIEEYYAAKGLSIVGYFHAN RFDDY+VGGVAKNI DHISRSFPHAALLLLDH
Sbjct: 62  QLEISLLLIEEYYAAKGLSIVGYFHANVRFDDYDVGGVAKNIADHISRSFPHAALLLLDH 121

Query: 123 RKLEALPKRKDRSPVVELYTRETSKNWKLAGSDGSGQLTIKEPSANVVLLDFMSSEKWQD 182
           RKLEALPKRKDRSPVVELYTRETSKNWKLAGSDGS QLT+KEPSANVVLLDF+SSEKWQD
Sbjct: 122 RKLEALPKRKDRSPVVELYTRETSKNWKLAGSDGSSQLTMKEPSANVVLLDFISSEKWQD 181

Query: 183 VVDFDDHLDDISKNWLNPDLFK 205
           VVDFDDHLDDISK+WLNPDLFK
Sbjct: 182 VVDFDDHLDDISKDWLNPDLFK 203

[Close]

BLAST of Sed0027327 vs. ExPASy TrEMBL
Match: A0A5A7SKW9 (ER membrane protein complex subunit 8/9-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold447G00760 PE=3 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 2.5e-102
Identity = 186/202 (92.08%), Postives = 197/202 (97.52%), Query Frame = 0


Query: 3   GSDLRFEISQNAYIKLVLHALKHRTSAVNGVLLGRVSGPNDIVEIADSVPLFHSAIGLLP 62
           G DLRFEISQNAYIKLVLHALKHR+SAVNGVLLGR+SGPND++EI+DSVPLFHS+IGLLP
Sbjct: 2   GGDLRFEISQNAYIKLVLHALKHRSSAVNGVLLGRISGPNDVIEISDSVPLFHSSIGLLP 61

Query: 63  QLEISLLLIEEYYAAKGLSIVGYFHANERFDDYEVGGVAKNICDHISRSFPHAALLLLDH 122
           QLEISLLLIEEYYAAKGL+IVGYFHANERFDDYEVGGVAKNI DHISR FPHAALLLLDH
Sbjct: 62  QLEISLLLIEEYYAAKGLNIVGYFHANERFDDYEVGGVAKNIGDHISRFFPHAALLLLDH 121

Query: 123 RKLEALPKRKDRSPVVELYTRETSKNWKLAGSDGSGQLTIKEPSANVVLLDFMSSEKWQD 182
           RKLEALPKRKDRSPV+ELYT+ETSKNWKLAGSDGS QL IKEPSANVVLLDF+SSEKWQD
Sbjct: 122 RKLEALPKRKDRSPVMELYTKETSKNWKLAGSDGSSQLMIKEPSANVVLLDFISSEKWQD 181

Query: 183 VVDFDDHLDDISKNWLNPDLFK 205
           VVDFDDHLDDISK+WLNPDLFK
Sbjct: 182 VVDFDDHLDDISKDWLNPDLFK 203

[Close]

BLAST of Sed0027327 vs. ExPASy TrEMBL
Match: A0A1S3C2C1 (ER membrane protein complex subunit 8/9 homolog OS=Cucumis melo OX=3656 GN=LOC103495860 PE=3 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 2.5e-102
Identity = 186/202 (92.08%), Postives = 197/202 (97.52%), Query Frame = 0


Query: 3   GSDLRFEISQNAYIKLVLHALKHRTSAVNGVLLGRVSGPNDIVEIADSVPLFHSAIGLLP 62
           G DLRFEISQNAYIKLVLHALKHR+SAVNGVLLGR+SGPND++EI+DSVPLFHS+IGLLP
Sbjct: 2   GGDLRFEISQNAYIKLVLHALKHRSSAVNGVLLGRISGPNDVIEISDSVPLFHSSIGLLP 61

Query: 63  QLEISLLLIEEYYAAKGLSIVGYFHANERFDDYEVGGVAKNICDHISRSFPHAALLLLDH 122
           QLEISLLLIEEYYAAKGL+IVGYFHANERFDDYEVGGVAKNI DHISR FPHAALLLLDH
Sbjct: 62  QLEISLLLIEEYYAAKGLNIVGYFHANERFDDYEVGGVAKNIGDHISRFFPHAALLLLDH 121

Query: 123 RKLEALPKRKDRSPVVELYTRETSKNWKLAGSDGSGQLTIKEPSANVVLLDFMSSEKWQD 182
           RKLEALPKRKDRSPV+ELYT+ETSKNWKLAGSDGS QL IKEPSANVVLLDF+SSEKWQD
Sbjct: 122 RKLEALPKRKDRSPVMELYTKETSKNWKLAGSDGSSQLMIKEPSANVVLLDFISSEKWQD 181

Query: 183 VVDFDDHLDDISKNWLNPDLFK 205
           VVDFDDHLDDISK+WLNPDLFK
Sbjct: 182 VVDFDDHLDDISKDWLNPDLFK 203

[Close]

BLAST of Sed0027327 vs. ExPASy TrEMBL
Match: A0A0A0KYR9 (MPN domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G419600 PE=3 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 4.2e-102
Identity = 185/202 (91.58%), Postives = 197/202 (97.52%), Query Frame = 0


Query: 3   GSDLRFEISQNAYIKLVLHALKHRTSAVNGVLLGRVSGPNDIVEIADSVPLFHSAIGLLP 62
           G DLRFEISQNAYIKLVLHALKHRT+AVNGVLLGR+SGPND++EI+DSVPLFHS+IGLLP
Sbjct: 2   GGDLRFEISQNAYIKLVLHALKHRTTAVNGVLLGRISGPNDVIEISDSVPLFHSSIGLLP 61

Query: 63  QLEISLLLIEEYYAAKGLSIVGYFHANERFDDYEVGGVAKNICDHISRSFPHAALLLLDH 122
           QLEISLLLIEEYYAAKGL+IVGYFHANERFDDYEVGGVAKNI DHISR FPHAALLLLDH
Sbjct: 62  QLEISLLLIEEYYAAKGLNIVGYFHANERFDDYEVGGVAKNIGDHISRFFPHAALLLLDH 121

Query: 123 RKLEALPKRKDRSPVVELYTRETSKNWKLAGSDGSGQLTIKEPSANVVLLDFMSSEKWQD 182
           RKLEALPKRKDRSPV+ELYT+ETSKNWKLAGSDGS QL +KEPSANVVLLDF+SSEKWQD
Sbjct: 122 RKLEALPKRKDRSPVMELYTKETSKNWKLAGSDGSSQLMMKEPSANVVLLDFISSEKWQD 181

Query: 183 VVDFDDHLDDISKNWLNPDLFK 205
           VVDFDDHLDDISK+WLNPDLFK
Sbjct: 182 VVDFDDHLDDISKDWLNPDLFK 203

[Close]

BLAST of Sed0027327 vs. ExPASy TrEMBL
Match: A0A6J1EH86 (ER membrane protein complex subunit 8/9 homolog OS=Cucurbita moschata OX=3662 GN=LOC111432510 PE=3 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 5.5e-102
Identity = 186/202 (92.08%), Postives = 197/202 (97.52%), Query Frame = 0


Query: 3   GSDLRFEISQNAYIKLVLHALKHRTSAVNGVLLGRVSGPNDIVEIADSVPLFHSAIGLLP 62
           G DLRFEISQNAYIKLVLHALKHRTSAVNGVLLGR+SG ND++EIA+SVPLFHS+IGLLP
Sbjct: 2   GGDLRFEISQNAYIKLVLHALKHRTSAVNGVLLGRISGSNDVIEIAESVPLFHSSIGLLP 61

Query: 63  QLEISLLLIEEYYAAKGLSIVGYFHANERFDDYEVGGVAKNICDHISRSFPHAALLLLDH 122
           QLEISLLLIEEYYAAKGLSIVGYFHANERFDDY+V GVAKNI DHISRSFPHAALLLLDH
Sbjct: 62  QLEISLLLIEEYYAAKGLSIVGYFHANERFDDYDVVGVAKNIADHISRSFPHAALLLLDH 121

Query: 123 RKLEALPKRKDRSPVVELYTRETSKNWKLAGSDGSGQLTIKEPSANVVLLDFMSSEKWQD 182
           RKLEALPKRKDRSPVVELYTRETSKNWKLAGSDGS QLT+KEPSANVV+LDF+SSEKWQD
Sbjct: 122 RKLEALPKRKDRSPVVELYTRETSKNWKLAGSDGSSQLTMKEPSANVVMLDFISSEKWQD 181

Query: 183 VVDFDDHLDDISKNWLNPDLFK 205
           VVDFDDHLDDISK+WLNP+LFK
Sbjct: 182 VVDFDDHLDDISKDWLNPNLFK 203

[Close]

BLAST of Sed0027327 vs. TAIR 10
Match: AT5G55940.1 (Uncharacterised protein family (UPF0172) )

HSP 1 Score: 286.2 bits (731), Expect = 2.1e-77
Identity = 136/200 (68.00%), Postives = 174/200 (87.00%), Query Frame = 0


Query: 5   DLRFEISQNAYIKLVLHALKHRTSAVNGVLLGRVSGPND-IVEIADSVPLFHSAIGLLPQ 64
           +L++EISQNAYIKLVLH+L+H+T+AVNGVL+GR+S  +D +VEI+DSVPLFHS + LLP 
Sbjct: 8   ELKYEISQNAYIKLVLHSLRHKTAAVNGVLVGRISPKDDGVVEISDSVPLFHSNLALLPP 67

Query: 65  LEISLLLIEEYYAAKGLSIVGYFHANERFDDYEVGGVAKNICDHISRSFPHAALLLLDHR 124
           LEISL++IEE+Y A+GLSIVGYFHANERFDD E+ GVAKNI DHISR FP A +LLL+++
Sbjct: 68  LEISLIMIEEHYVAQGLSIVGYFHANERFDDVELCGVAKNIGDHISRYFPQAPILLLNNK 127

Query: 125 KLEALPKRKDRSPVVELYTRETSKNWKLAGSDGSGQLTIKEPSANVVLLDFMSSEKWQDV 184
           KLEAL K K+RSPV++L  ++ SKNW++ G+DG  +L +KEPSANVVL D++SSEKW+DV
Sbjct: 128 KLEALSKGKERSPVMQLCVKDASKNWRVVGADGGSKLLLKEPSANVVLSDYISSEKWKDV 187

Query: 185 VDFDDHLDDISKNWLNPDLF 204
            D DDHLDD++K+WLNP LF
Sbjct: 188 TDVDDHLDDVTKDWLNPGLF 207

[Close]

BLAST of Sed0027327 vs. TAIR 10
Match: AT5G51620.3 (Uncharacterised protein family (UPF0172) )

HSP 1 Score: 80.9 bits (198), Expect = 1.3e-15
Identity = 38/50 (76.00%), Postives = 43/50 (86.00%), Query Frame = 0


Query: 70  LIEEYYAAKGLSIVGYFHANERFDDYEVGGVAKNICDHISRSFPHAALLL 120
           +IEE+Y A+GLSIVGYFHANERFDD E+ GVAKNI DHISR FP A +LL
Sbjct: 1   MIEEHYVAQGLSIVGYFHANERFDDVELCGVAKNIGDHISRYFPQAPILL 50

[Close]

BLAST of Sed0027327 vs. TAIR 10
Match: AT5G51620.2 (Uncharacterised protein family (UPF0172) )

HSP 1 Score: 62.0 bits (149), Expect = 6.4e-10
Identity = 28/35 (80.00%), Postives = 32/35 (91.43%), Query Frame = 0


Query: 70  LIEEYYAAKGLSIVGYFHANERFDDYEVGGVAKNI 105
           +IEE+Y A+GLSIVGYFHANERFDD E+ GVAKNI
Sbjct: 1   MIEEHYVAQGLSIVGYFHANERFDDVELCGVAKNI 35

[Close]

BLAST of Sed0027327 vs. TAIR 10
Match: AT5G51620.1 (Uncharacterised protein family (UPF0172) )

HSP 1 Score: 62.0 bits (149), Expect = 6.4e-10
Identity = 28/35 (80.00%), Postives = 32/35 (91.43%), Query Frame = 0


Query: 70  LIEEYYAAKGLSIVGYFHANERFDDYEVGGVAKNI 105
           +IEE+Y A+GLSIVGYFHANERFDD E+ GVAKNI
Sbjct: 1   MIEEHYVAQGLSIVGYFHANERFDDVELCGVAKNI 35

The following BLAST results are available for this feature:

BLAST of Sed0027327 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880935.1	3.5e-103	93.07	ER membrane protein complex subunit 8/9 homolog [Benincasa hispida]	[more]
KAG6595444.1	4.6e-103	93.07	ER membrane protein complex subunit 8/9-like protein, partial [Cucurbita argyros...	[more]
XP_023518172.1	1.0e-102	93.07	ER membrane protein complex subunit 8/9 homolog [Cucurbita pepo subsp. pepo]	[more]
XP_022966460.1	1.0e-102	93.07	ER membrane protein complex subunit 8/9 homolog [Cucurbita maxima]	[more]
XP_008455761.1	5.1e-102	92.08	PREDICTED: ER membrane protein complex subunit 8/9 homolog [Cucumis melo] >KAA00...	[more]

BLAST of Sed0027327 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FG71	2.9e-76	68.00	ER membrane protein complex subunit 8/9 homolog OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9DB76	1.7e-23	34.54	ER membrane protein complex subunit 9 OS=Mus musculus OX=10090 GN=Emc9 PE=1 SV=1	[more]
Q5FVL2	1.4e-22	30.39	ER membrane protein complex subunit 8 OS=Rattus norvegicus OX=10116 GN=Emc8 PE=2...	[more]
O70378	2.4e-22	30.39	ER membrane protein complex subunit 8 OS=Mus musculus OX=10090 GN=Emc8 PE=1 SV=1	[more]
Q5U1W7	2.4e-22	33.51	ER membrane protein complex subunit 9 OS=Rattus norvegicus OX=10116 GN=Emc9 PE=2...	[more]

BLAST of Sed0027327 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HRP6	5.0e-103	93.07	ER membrane protein complex subunit 8/9 homolog OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A5A7SKW9	2.5e-102	92.08	ER membrane protein complex subunit 8/9-like protein OS=Cucumis melo var. makuwa...	[more]
A0A1S3C2C1	2.5e-102	92.08	ER membrane protein complex subunit 8/9 homolog OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0KYR9	4.2e-102	91.58	MPN domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G419600 PE=3 SV...	[more]
A0A6J1EH86	5.5e-102	92.08	ER membrane protein complex subunit 8/9 homolog OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Sed0027327 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G55940.1	2.1e-77	68.00	Uncharacterised protein family (UPF0172)	[more]
AT5G51620.3	1.3e-15	76.00	Uncharacterised protein family (UPF0172)	[more]
AT5G51620.2	6.4e-10	80.00	Uncharacterised protein family (UPF0172)	[more]
AT5G51620.1	6.4e-10	80.00	Uncharacterised protein family (UPF0172)	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005366	ER membrane protein complex subunit 8/9	PFAM	PF03665	UPF0172	coord: 8..202 e-value: 9.7E-59 score: 198.7
IPR005366	ER membrane protein complex subunit 8/9	PANTHER	PTHR12941	ER MEMBRANE PROTEIN COMPLEX	coord: 6..204
IPR005366	ER membrane protein complex subunit 8/9	CDD	cd08060	MPN_UPF0172	coord: 10..199 e-value: 1.1082E-70 score: 210.999
None	No IPR available	PANTHER	PTHR12941:SF14	ER MEMBRANE PROTEIN COMPLEX SUBUNIT 8/9 HOMOLOG	coord: 6..204
IPR037518	MPN domain	PROSITE	PS50249	MPN	coord: 8..147 score: 17.6798

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0027327.1	Sed0027327.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0072546	EMC complex