Sed0027326 (gene) Chayote v1

Overview
NameSed0027326
Typegene
OrganismSechium edule (Chayote v1)
Description40S ribosomal protein S6
LocationLG10: 15022057 .. 15025010 (-)
RNA-Seq ExpressionSed0027326
SyntenySed0027326
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGGTAGTCGAAATAGATTATGCAAGTGTTTTAAATCCAATGATAAAAATATTAGAGCACATATATACATTCATTTATAGAAGGTGTTAAACCCTAAACGAAAGGCATAGCACCGTCCCTTCTTTGTTCATCCCTTCCGGCAGCCGCCTCTATAACAATCTCTTCAACATGAAGGTTCAACGTTTTTCCGTCATTCTGAATGTTTTTTTTTTGTTTTTTGTTTTTTGTTTCTACTTTTGCTGTATTATTAATTTTGAGATCTCGTCTTTCAGTTTAACATCGCGAATCCGACTACTGGATGCCAGAAAAAGCTCGAAATCGACGATGACCAGAAACTGTTAGCTTTCAAATCTCCTTATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTAATTTAAAATTTTTAAACAATCTTTAATGTGTATTCTATGTGGATGAATTATATGGGACTGAGAACCAAAAAGCTTGTAGCACTTTCATTCTTTTGGTGTTCCTCTAAAACAAAATTGTTATGTTCCTCTTTAATCGAATATTCATATCCTGAACTTTACATTAATGCTTGGGGGTTGTCTTGGAGAGGTTAGGGTTATATTTCTAGAAGAACTCTGTTTGGTAACCATTTTATTTTTAGTTGTTGGTTTATGCAATTTAAGCCTAGAACAACTATCTTAGTACGTCTATTCTTACTTGGATTCCTATATTTTACCTATATTTTTAGAAACTAAATCATAATTTGGAAACGAAAAACGTAGGCCCCTTTTGGTAATCATTTTGTTTTTAGTTTTTGGTTTTTGAAATTTAAGTCTACAATATGAATATCTACATCTTACCTATATTTGTATAAACCTAACCAAAATTTGCAAAAAAAAGTAGCTTCCAAAAGTTCGTTTTTGTTTTTGAAATTTGGTTAGAATTCACATACTTTGTTTAAGAAAATTTAGATACATTGTAGGAAGGATGGAGCACATTGTAGGAAATATGATTAAGGGTAAAACTAAGCTTAAATTTCAATAACTAGAAACAAAAAACTAAATGGTTATCGAATGGGGCTGTGGCTTCCAAAAATTTATTTTTGAATTTGGTTAGCATTTATCTACTTTCTTATATATTGTAGGACAGATGGGGATACATGGTAGGAAATTTGAGTAAAATAACTTAAATTTCTAAAACCACAAATCAATATTCAAATGGTTATCAAATGGGGTTTTAGTTTTTTGAAATTAATCTTCTTAATAGAAAAACAGCAGATCCTTGATTCCATTACTAAGCTTTTCTGGAACAGGGTTTTTGTGATGTATGATGAATAAAACGGCTCCCTTTTGATCGGTGGTCTTGATATTGTTAATTTGATAATGTTTTCAGTTTAAATTATTGAGTTAGTATTTTTCCTTGCCATGGAAGACTTCAATAGGCTTCTTTATCTACAACGGCTGGAACCTGTCTGCAATCTTGTCATCCGTATTTGCTTGTTTATTTTCCTGTATTTTTTTTGGCTTGGCAGTTGTTTCTCTCAAAGGATTAAGGAATAATGTATTTAATCGCAACTTTTTTTTCATGGACTAAAAAAATTATCACTTTTCTTGGTTAAGCCGAGCATTTTTTGACAAGAGGATCTCTCAGGAGGTCAGTGGAGATTCCCTTGGAGAGGTATGTATGATCTTCCTTTTATCCATTGAAGGAAATCTTAGTTCTTTGTTGTTGTGGCTTAGTTTACTGATTGTGGAATTTTCTCTTCTCAGGAATTCAAGGGCTATGTTTTCAAGATTATGGGAGGCTGTGACAAGCAGGGATTCCCGATGAAACAGGGAGTTTTGACCCCTGGCCGTGTCCGTCTCTTACTACATAGAGGTTTGTTGCACTGTTTTTTCTTGATAGGAAATAAGAAACTTTCATTAATGTATGAAAAGCTACACAGAAAGCCTATCATAATTGCATTAAATTATTTCAATGTGATAGAAGAGTAGCAAAAATCTATAGAAGGTGATATCTTATGTGTCCAAGATACAGCCGAAAAGGCTATAAATCCATGATGTTGAGGTTTGTTGTATTGTTTAGTCTATAGTTAATTCACTTAACTATAGTTTTGGTCTATGTTAATTTTCTTGCAATGATTCATAACACTATCCCAAGTAATATAAGCATCTATTTGACTTTTGTGGCCAGGTACCCCTTGCTTTCGTGGTTATGGAAGGCGAAATGGAGAACGCAGGAGGAAGTCTGTCCGTGGTTGCATTGTCAGCCAAGACCTTTCTGTTCTGAATCTTGTAATTGTGAAGAAGGGAGATAATGATCTTCCTGGCTTGACCGACACTGAGAAGCCTAGGATGAGGGGTCCCAAAAGAGCATCTAAGATTCGAAAGCTTTTTAACCTGTCAAAGGAGGATGATGTTCGGAAGTATGTCAACACATACCGTAGAACATTCACCACCAAATCTGGTAAGTCTTACTATTGCTTTTTGCTAGTTTTAAACCTGTTTGTTAAATCAAAGATGGTTTTGGTTTTTATTATTCTGATGATTGGCAGGCAAAAAGGTTAGCAAAGCCCCTAAGATTCAGAGGTTGGTTACCCCATTGACATTGCAGAGAAAGCGCGGTAGAATTGCGGAGAAGAAAAAGAGAATTGCGAAGGCCAAGTGTGAGGCTGCTGAGTATCAGAAGCTTCTTGCGTCTAGATTGAAGGAGCAAAGAGAACGCCGTAGTGAGAGTTTGGCAAAGAAGAGGTCCAGGCTCTCTACTGCCTCAAAGCCGTCCATTGCTGCTTAGTATGTTTGATTATTTATGTATCAAGCCTTCTGCTATCTTTATTTTTGCTTTAAAAAGAATCTACATTTTTGTTATGACATCTAGAATCTTTGCTATTTTTGGTTTCTAATTTGACAGTTATTTCTTCACATACTTCTTATTTGATAATATTCATGAATTTTGAAATTTAAGTAAGCCTTGTTTACTAGTT

mRNA sequence

GGGTAGTCGAAATAGATTATGCAAGTGTTTTAAATCCAATGATAAAAATATTAGAGCACATATATACATTCATTTATAGAAGGTGTTAAACCCTAAACGAAAGGCATAGCACCGTCCCTTCTTTGTTCATCCCTTCCGGCAGCCGCCTCTATAACAATCTCTTCAACATGAAGTTTAACATCGCGAATCCGACTACTGGATGCCAGAAAAAGCTCGAAATCGACGATGACCAGAAACTCCGAGCATTTTTTGACAAGAGGATCTCTCAGGAGGTCAGTGGAGATTCCCTTGGAGAGGAATTCAAGGGCTATGTTTTCAAGATTATGGGAGGCTGTGACAAGCAGGGATTCCCGATGAAACAGGGAGTTTTGACCCCTGGCCGTGTCCGTCTCTTACTACATAGAGGTACCCCTTGCTTTCGTGGTTATGGAAGGCGAAATGGAGAACGCAGGAGGAAGTCTGTCCGTGGTTGCATTGTCAGCCAAGACCTTTCTGTTCTGAATCTTGTAATTGTGAAGAAGGGAGATAATGATCTTCCTGGCTTGACCGACACTGAGAAGCCTAGGATGAGGGGTCCCAAAAGAGCATCTAAGATTCGAAAGCTTTTTAACCTGTCAAAGGAGGATGATGTTCGGAAGTATGTCAACACATACCGTAGAACATTCACCACCAAATCTGGCAAAAAGGTTAGCAAAGCCCCTAAGATTCAGAGGTTGGTTACCCCATTGACATTGCAGAGAAAGCGCGGTAGAATTGCGGAGAAGAAAAAGAGAATTGCGAAGGCCAAGTGTGAGGCTGCTGAGTATCAGAAGCTTCTTGCGTCTAGATTGAAGGAGCAAAGAGAACGCCGTAGTGAGAGTTTGGCAAAGAAGAGGTCCAGGCTCTCTACTGCCTCAAAGCCGTCCATTGCTGCTTAGTATGTTTGATTATTTATGTATCAAGCCTTCTGCTATCTTTATTTTTGCTTTAAAAAGAATCTACATTTTTGTTATGACATCTAGAATCTTTGCTATTTTTGGTTTCTAATTTGACAGTTATTTCTTCACATACTTCTTATTTGATAATATTCATGAATTTTGAAATTTAAGTAAGCCTTGTTTACTAGTT

Coding sequence (CDS)

ATGAAGTTTAACATCGCGAATCCGACTACTGGATGCCAGAAAAAGCTCGAAATCGACGATGACCAGAAACTCCGAGCATTTTTTGACAAGAGGATCTCTCAGGAGGTCAGTGGAGATTCCCTTGGAGAGGAATTCAAGGGCTATGTTTTCAAGATTATGGGAGGCTGTGACAAGCAGGGATTCCCGATGAAACAGGGAGTTTTGACCCCTGGCCGTGTCCGTCTCTTACTACATAGAGGTACCCCTTGCTTTCGTGGTTATGGAAGGCGAAATGGAGAACGCAGGAGGAAGTCTGTCCGTGGTTGCATTGTCAGCCAAGACCTTTCTGTTCTGAATCTTGTAATTGTGAAGAAGGGAGATAATGATCTTCCTGGCTTGACCGACACTGAGAAGCCTAGGATGAGGGGTCCCAAAAGAGCATCTAAGATTCGAAAGCTTTTTAACCTGTCAAAGGAGGATGATGTTCGGAAGTATGTCAACACATACCGTAGAACATTCACCACCAAATCTGGCAAAAAGGTTAGCAAAGCCCCTAAGATTCAGAGGTTGGTTACCCCATTGACATTGCAGAGAAAGCGCGGTAGAATTGCGGAGAAGAAAAAGAGAATTGCGAAGGCCAAGTGTGAGGCTGCTGAGTATCAGAAGCTTCTTGCGTCTAGATTGAAGGAGCAAAGAGAACGCCGTAGTGAGAGTTTGGCAAAGAAGAGGTCCAGGCTCTCTACTGCCTCAAAGCCGTCCATTGCTGCTTAG

Protein sequence

MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKCEAAEYQKLLASRLKEQRERRSESLAKKRSRLSTASKPSIAA
Homology
[Close]
BLAST of Sed0027326 vs. NCBI nr
Match: XP_022951611.1 (40S ribosomal protein S6-like [Cucurbita moschata] >XP_023002727.1 40S ribosomal protein S6-like [Cucurbita maxima] >XP_023538404.1 40S ribosomal protein S6-like [Cucurbita pepo subsp. pepo] >KAG7020222.1 40S ribosomal protein S6 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 475.3 bits (1222), Expect = 3.2e-130
Identity = 248/249 (99.60%), Postives = 248/249 (99.60%), Query Frame = 0 

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKCEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKKRIAKAK EAAEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240

Query: 241 TASKPSIAA 250
           TASKPSIAA
Sbjct: 241 TASKPSIAA 249

[Close]
BLAST of Sed0027326 vs. NCBI nr
Match: KAG6585304.1 (40S ribosomal protein S6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 475.3 bits (1222), Expect = 3.2e-130
Identity = 248/249 (99.60%), Postives = 248/249 (99.60%), Query Frame = 0 

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 93  MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 152

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD
Sbjct: 153 FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 212

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI
Sbjct: 213 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 272

Query: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKCEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKKRIAKAK EAAEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 273 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 332

Query: 241 TASKPSIAA 250
           TASKPSIAA
Sbjct: 333 TASKPSIAA 341

[Close]
BLAST of Sed0027326 vs. NCBI nr
Match: XP_022997249.1 (40S ribosomal protein S6-like [Cucurbita maxima])

HSP 1 Score: 472.6 bits (1215), Expect = 2.1e-129
Identity = 246/249 (98.80%), Postives = 248/249 (99.60%), Query Frame = 0 

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR+FTTK+GKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKCEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKKRIAKAK EAAEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240

Query: 241 TASKPSIAA 250
           TASKPSIAA
Sbjct: 241 TASKPSIAA 249

[Close]
BLAST of Sed0027326 vs. NCBI nr
Match: XP_022948606.1 (40S ribosomal protein S6 [Cucurbita moschata] >XP_022974831.1 40S ribosomal protein S6 [Cucurbita maxima] >XP_023540275.1 40S ribosomal protein S6 [Cucurbita pepo subsp. pepo] >KAG6597045.1 40S ribosomal protein S6, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028519.1 40S ribosomal protein S6 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 471.9 bits (1213), Expect = 3.5e-129
Identity = 246/249 (98.80%), Postives = 247/249 (99.20%), Query Frame = 0 

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR+FTTKSGKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKCEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKKRIAKAK EAAEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240

Query: 241 TASKPSIAA 250
            ASKPSIAA
Sbjct: 241 AASKPSIAA 249

[Close]
BLAST of Sed0027326 vs. NCBI nr
Match: KAA0065138.1 (40S ribosomal protein S6-like [Cucumis melo var. makuwa])

HSP 1 Score: 471.5 bits (1212), Expect = 4.6e-129
Identity = 245/249 (98.39%), Postives = 247/249 (99.20%), Query Frame = 0 

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR+FTTKSGKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKCEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKKRIAKAK EAAEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240

Query: 241 TASKPSIAA 250
            ASKPS+AA
Sbjct: 241 AASKPSVAA 249

[Close]
BLAST of Sed0027326 vs. ExPASy Swiss-Prot
Match: Q9M3V8 (40S ribosomal protein S6 OS=Asparagus officinalis OX=4686 GN=rps6 PE=2 SV=1)

HSP 1 Score: 443.0 bits (1138), Expect = 2.3e-123
Identity = 228/243 (93.83%), Postives = 234/243 (96.30%), Query Frame = 0 

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAF+DKRISQEVSGD+LGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVS DLSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180
           NDLPGLTD EKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFT K GK  SKAPKI
Sbjct: 121 NDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTNKKGKTCSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKCEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKR RIAEKKKR+AKAK EAAEYQKLLASRLKEQR+RRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRARIAEKKKRVAKAKSEAAEYQKLLASRLKEQRDRRSESLAKKRSRLS 240

Query: 241 TAS 244
            A+
Sbjct: 241 AAA 243

[Close]
BLAST of Sed0027326 vs. ExPASy Swiss-Prot
Match: P51430 (40S ribosomal protein S6-2 OS=Arabidopsis thaliana OX=3702 GN=RPS6B PE=1 SV=3)

HSP 1 Score: 436.0 bits (1120), Expect = 2.8e-121
Identity = 225/249 (90.36%), Postives = 236/249 (94.78%), Query Frame = 0 

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFN+ANPTTGCQKKLEIDDDQKLRAFFDKR+SQEVSGD+LGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFFDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIVS DLSVLNLVIVKKG 
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGV 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180
           +DLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVRKYVNTYRRTFT K GKKVSKAPKI
Sbjct: 121 SDLPGLTDTEKPRMRGPKRASKIRKLFNLGKEDDVRKYVNTYRRTFTNKKGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKCEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKR RIA+KKKRIAKA  +AA+YQKLLASRLKEQR+RRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRARIADKKKRIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLS 240

Query: 241 TASKPSIAA 250
           +A    +AA
Sbjct: 241 SAPAKPVAA 249

[Close]
BLAST of Sed0027326 vs. ExPASy Swiss-Prot
Match: O48549 (40S ribosomal protein S6-1 OS=Arabidopsis thaliana OX=3702 GN=RPS6A PE=1 SV=2)

HSP 1 Score: 431.8 bits (1109), Expect = 5.3e-120
Identity = 223/250 (89.20%), Postives = 237/250 (94.80%), Query Frame = 0 

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFN+ANPTTGCQKKLEIDDDQKLRAF+DKRISQEVSGD+LGEEFKGYVFKI GGCDKQG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIKGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIVS DLSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVR YVNTYRR FT K GK+VSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRTYVNTYRRKFTNKKGKEVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKCEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKR RIA+KKK+IAKA  +AA+YQKLLASRLKEQR+RRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRARIADKKKKIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLS 240

Query: 241 T-ASKPSIAA 250
           + A+KPS+ A
Sbjct: 241 SAAAKPSVTA 250

[Close]
BLAST of Sed0027326 vs. ExPASy Swiss-Prot
Match: P29345 (40S ribosomal protein S6 (Fragment) OS=Nicotiana tabacum OX=4097 GN=RPS6 PE=2 SV=2)

HSP 1 Score: 315.8 bits (808), Expect = 4.2e-85
Identity = 176/204 (86.27%), Postives = 183/204 (89.71%), Query Frame = 0 

Query: 46  KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVS 105
           KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL+RGTPCFRGYGRRNGERRRKSVRGCIVS
Sbjct: 1   KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLYRGTPCFRGYGRRNGERRRKSVRGCIVS 60

Query: 106 QDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRT 165
            DLSVLNLVIVKKG+NDLPGLTDTEKPRMRGP+   +   L+   KEDDVRKYVNT    
Sbjct: 61  PDLSVLNLVIVKKGENDLPGLTDTEKPRMRGPREPQRSEALY--FKEDDVRKYVNT-TAE 120

Query: 166 FTTKSGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKCEAAEYQKLLASRLKEQR 225
           FTTK   K SKAPKIQRLVTPLTLQRKR RIA+KKKRIAKAK EAAEYQKLLASRLKEQR
Sbjct: 121 FTTK--WKGSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLASRLKEQR 180

Query: 226 ERRSESLAKKRSRLSTASKPSIAA 250
           E+RSESLAKKRSRLS ASKPSIAA
Sbjct: 181 EKRSESLAKKRSRLSAASKPSIAA 199

[Close]
BLAST of Sed0027326 vs. ExPASy Swiss-Prot
Match: P62753 (40S ribosomal protein S6 OS=Homo sapiens OX=9606 GN=RPS6 PE=1 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 5.5e-77
Identity = 159/241 (65.98%), Postives = 190/241 (78.84%), Query Frame = 0 

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MK NI+ P TGCQK +E+DD++KLR F++KR++ EV+ D+LGEE+KGYV +I GG DKQG
Sbjct: 1   MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLT GRVRLLL +G  C+R   RR GER+RKSVRGCIV  +LSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTHGRVRLLLSKGHSCYR--PRRTGERKRKSVRGCIVDANLSVLNLVIVKKGE 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180
            D+PGLTDT  PR  GPKRAS+IRKLFNLSKEDDVR+YV   R+    +  K  +KAPKI
Sbjct: 121 KDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRKPLNKEGKKPRTKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKCEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTP  LQ KR RIA KK+R  K K EAAEY KLLA R+KE +E+R E +AK+R RLS
Sbjct: 181 QRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRR-RLS 236

Query: 241 T 242
           +
Sbjct: 241 S 236

[Close]
BLAST of Sed0027326 vs. ExPASy TrEMBL
Match: A0A6J1KKB1 (40S ribosomal protein S6 OS=Cucurbita maxima OX=3661 GN=LOC111496500 PE=3 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 1.5e-130
Identity = 248/249 (99.60%), Postives = 248/249 (99.60%), Query Frame = 0 

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKCEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKKRIAKAK EAAEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240

Query: 241 TASKPSIAA 250
           TASKPSIAA
Sbjct: 241 TASKPSIAA 249

[Close]
BLAST of Sed0027326 vs. ExPASy TrEMBL
Match: A0A6J1GI12 (40S ribosomal protein S6 OS=Cucurbita moschata OX=3662 GN=LOC111454373 PE=3 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 1.5e-130
Identity = 248/249 (99.60%), Postives = 248/249 (99.60%), Query Frame = 0 

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKCEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKKRIAKAK EAAEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240

Query: 241 TASKPSIAA 250
           TASKPSIAA
Sbjct: 241 TASKPSIAA 249

[Close]
BLAST of Sed0027326 vs. ExPASy TrEMBL
Match: A0A6J1KAX8 (40S ribosomal protein S6 OS=Cucurbita maxima OX=3661 GN=LOC111492209 PE=3 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 1.0e-129
Identity = 246/249 (98.80%), Postives = 248/249 (99.60%), Query Frame = 0 

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR+FTTK+GKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKAGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKCEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKKRIAKAK EAAEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240

Query: 241 TASKPSIAA 250
           TASKPSIAA
Sbjct: 241 TASKPSIAA 249

[Close]
BLAST of Sed0027326 vs. ExPASy TrEMBL
Match: A0A6J1ICI3 (40S ribosomal protein S6 OS=Cucurbita maxima OX=3661 GN=LOC111473607 PE=3 SV=1)

HSP 1 Score: 471.9 bits (1213), Expect = 1.7e-129
Identity = 246/249 (98.80%), Postives = 247/249 (99.20%), Query Frame = 0 

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR+FTTKSGKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKCEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKKRIAKAK EAAEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240

Query: 241 TASKPSIAA 250
            ASKPSIAA
Sbjct: 241 AASKPSIAA 249

[Close]
BLAST of Sed0027326 vs. ExPASy TrEMBL
Match: A0A6J1G9P2 (40S ribosomal protein S6 OS=Cucurbita moschata OX=3662 GN=LOC111452228 PE=3 SV=1)

HSP 1 Score: 471.9 bits (1213), Expect = 1.7e-129
Identity = 246/249 (98.80%), Postives = 247/249 (99.20%), Query Frame = 0 

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR+FTTKSGKKVSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKCEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKRGRIAEKKKRIAKAK EAAEYQKLLASRLKEQRERRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240

Query: 241 TASKPSIAA 250
            ASKPSIAA
Sbjct: 241 AASKPSIAA 249

[Close]
BLAST of Sed0027326 vs. TAIR 10
Match: AT5G10360.1 (Ribosomal protein S6e )

HSP 1 Score: 436.0 bits (1120), Expect = 2.0e-122
Identity = 225/249 (90.36%), Postives = 236/249 (94.78%), Query Frame = 0 

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFN+ANPTTGCQKKLEIDDDQKLRAFFDKR+SQEVSGD+LGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFFDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIVS DLSVLNLVIVKKG 
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGV 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180
           +DLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVRKYVNTYRRTFT K GKKVSKAPKI
Sbjct: 121 SDLPGLTDTEKPRMRGPKRASKIRKLFNLGKEDDVRKYVNTYRRTFTNKKGKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKCEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKR RIA+KKKRIAKA  +AA+YQKLLASRLKEQR+RRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRARIADKKKRIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLS 240

Query: 241 TASKPSIAA 250
           +A    +AA
Sbjct: 241 SAPAKPVAA 249

[Close]
BLAST of Sed0027326 vs. TAIR 10
Match: AT4G31700.1 (ribosomal protein S6 )

HSP 1 Score: 431.8 bits (1109), Expect = 3.7e-121
Identity = 223/250 (89.20%), Postives = 237/250 (94.80%), Query Frame = 0 

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFN+ANPTTGCQKKLEIDDDQKLRAF+DKRISQEVSGD+LGEEFKGYVFKI GGCDKQG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFKGYVFKIKGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIVS DLSVLNLVIVKKG+
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180
           NDLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVR YVNTYRR FT K GK+VSKAPKI
Sbjct: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRTYVNTYRRKFTNKKGKEVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKCEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKR RIA+KKK+IAKA  +AA+YQKLLASRLKEQR+RRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRARIADKKKKIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLS 240

Query: 241 T-ASKPSIAA 250
           + A+KPS+ A
Sbjct: 241 SAAAKPSVTA 250

[Close]
BLAST of Sed0027326 vs. TAIR 10
Match: AT5G10360.2 (Ribosomal protein S6e )

HSP 1 Score: 319.7 bits (818), Expect = 2.1e-87
Identity = 178/249 (71.49%), Postives = 188/249 (75.50%), Query Frame = 0 

Query: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQG 60
           MKFN+ANPTTGCQKKLEIDDDQKLRAFFDKR+SQEVSGD+LGEEFKGYVFKIMGGCDKQG
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKLRAFFDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGD 120
           FPMKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIVS DLSVLNLVIVKK  
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKK-- 120

Query: 121 NDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180
                                                             GKKVSKAPKI
Sbjct: 121 --------------------------------------------------GKKVSKAPKI 180

Query: 181 QRLVTPLTLQRKRGRIAEKKKRIAKAKCEAAEYQKLLASRLKEQRERRSESLAKKRSRLS 240
           QRLVTPLTLQRKR RIA+KKKRIAKA  +AA+YQKLLASRLKEQR+RRSESLAKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRARIADKKKRIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLS 197

Query: 241 TASKPSIAA 250
           +A    +AA
Sbjct: 241 SAPAKPVAA 197

[Close]
BLAST of Sed0027326 vs. TAIR 10
Match: AT4G31700.2 (ribosomal protein S6 )

HSP 1 Score: 307.8 bits (787), Expect = 8.2e-84
Identity = 165/188 (87.77%), Postives = 176/188 (93.62%), Query Frame = 0 

Query: 63  MKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDND 122
           MKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIVS DLSVLNLVIVKKG+ND
Sbjct: 1   MKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGEND 60

Query: 123 LPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKIQR 182
           LPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVR YVNTYRR FT K GK+VSKAPKIQR
Sbjct: 61  LPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRTYVNTYRRKFTNKKGKEVSKAPKIQR 120

Query: 183 LVTPLTLQRKRGRIAEKKKRIAKAKCEAAEYQKLLASRLKEQRERRSESLAKKRSRLST- 242
           LVTPLTLQRKR RIA+KKK+IAKA  +AA+YQKLLASRLKEQR+RRSESLAKKRSRLS+ 
Sbjct: 121 LVTPLTLQRKRARIADKKKKIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLSSA 180

Query: 243 ASKPSIAA 250
           A+KPS+ A
Sbjct: 181 AAKPSVTA 188

The following BLAST results are available for this feature:
BLAST of Sed0027326 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022951611.13.2e-13099.6040S ribosomal protein S6-like [Cucurbita moschata] >XP_023002727.1 40S ribosomal... [more]
KAG6585304.13.2e-13099.6040S ribosomal protein S6, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022997249.12.1e-12998.8040S ribosomal protein S6-like [Cucurbita maxima][more]
XP_022948606.13.5e-12998.8040S ribosomal protein S6 [Cucurbita moschata] >XP_022974831.1 40S ribosomal prot... [more]
KAA0065138.14.6e-12998.3940S ribosomal protein S6-like [Cucumis melo var. makuwa][more]
BLAST of Sed0027326 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M3V82.3e-12393.8340S ribosomal protein S6 OS=Asparagus officinalis OX=4686 GN=rps6 PE=2 SV=1[more]
P514302.8e-12190.3640S ribosomal protein S6-2 OS=Arabidopsis thaliana OX=3702 GN=RPS6B PE=1 SV=3[more]
O485495.3e-12089.2040S ribosomal protein S6-1 OS=Arabidopsis thaliana OX=3702 GN=RPS6A PE=1 SV=2[more]
P293454.2e-8586.2740S ribosomal protein S6 (Fragment) OS=Nicotiana tabacum OX=4097 GN=RPS6 PE=2 SV... [more]
P627535.5e-7765.9840S ribosomal protein S6 OS=Homo sapiens OX=9606 GN=RPS6 PE=1 SV=1[more]
BLAST of Sed0027326 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1KKB11.5e-13099.6040S ribosomal protein S6 OS=Cucurbita maxima OX=3661 GN=LOC111496500 PE=3 SV=1[more]
A0A6J1GI121.5e-13099.6040S ribosomal protein S6 OS=Cucurbita moschata OX=3662 GN=LOC111454373 PE=3 SV=1[more]
A0A6J1KAX81.0e-12998.8040S ribosomal protein S6 OS=Cucurbita maxima OX=3661 GN=LOC111492209 PE=3 SV=1[more]
A0A6J1ICI31.7e-12998.8040S ribosomal protein S6 OS=Cucurbita maxima OX=3661 GN=LOC111473607 PE=3 SV=1[more]
A0A6J1G9P21.7e-12998.8040S ribosomal protein S6 OS=Cucurbita moschata OX=3662 GN=LOC111452228 PE=3 SV=1[more]
BLAST of Sed0027326 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G10360.12.0e-12290.36Ribosomal protein S6e [more]
AT4G31700.13.7e-12189.20ribosomal protein S6 [more]
AT5G10360.22.1e-8771.49Ribosomal protein S6e [more]
AT4G31700.28.2e-8487.77ribosomal protein S6 [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 189..216
NoneNo IPR availableGENE3D1.20.5.2650coord: 133..234
e-value: 1.2E-38
score: 133.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 222..249
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 222..237
NoneNo IPR availablePANTHERPTHR11502:SF2240S RIBOSOMAL PROTEIN S6-LIKEcoord: 1..249
IPR001377Ribosomal protein S6eSMARTSM01405Ribosomal_S6e_2coord: 1..128
e-value: 2.0E-81
score: 286.5
IPR001377Ribosomal protein S6ePFAMPF01092Ribosomal_S6ecoord: 1..128
e-value: 4.6E-56
score: 188.2
IPR001377Ribosomal protein S6ePANTHERPTHR1150240S RIBOSOMAL PROTEIN S6coord: 1..249
IPR014401Ribosomal protein S6, eukaryoticPIRSFPIRSF002129RPS6ecoord: 1..249
e-value: 1.0E-118
score: 393.0
IPR018282Ribosomal protein S6e, conserved sitePROSITEPS00578RIBOSOMAL_S6Ecoord: 52..63

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0027326.1Sed0027326.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome