Sed0027320 (gene) Chayote v1

Overview


Name	Sed0027320
Type	gene
Organism	Sechium edule (Chayote v1)
Description	SKI/DACH domain-containing protein 1
Location	LG13: 26093853 .. 26094314 (-)
RNA-Seq Expression	Sed0027320
Synteny	Sed0027320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAACTCTTCACAAATTCAAATCTAATCTCGACGACCGCCGTCGCCACCGCTGCTGCCAACGCCATCCGAAGCACCGCCAATCCCCCGGCGTTTGCTCTCTTTGCTTGACCGAAAAGCTCTCGCGCATCCTCTCCACGAATGCTTCGTCGCGGGAACTCTCCGACTCTCCTTCTTCCTCTTCATGTTCCTCTTCTTATGACTCCTCTCCTTCCTCTTGTTCTTCGCCCGACCGGCCTCGTGCTAGGGCTAGCTTCGTGTTTTCGGCGCCTTCGATCTTTAAGAAGAGTAGATCGATGGCGTTTGGGACGAGACCGAGGCGGGGAACGGAGAGCGAAAAGAAGAGTACGTTAGGGTTTTGTTGGAGGTTTTTGAGTCGGCCGAGCAATAAGGGGATGGAAATGGAGAAGGCTTTGATGCGCTCCACAACTGTTGTCCTCCACACCAACGTGCATGGCTGA

mRNA sequence

ATGGCAACTCTTCACAAATTCAAATCTAATCTCGACGACCGCCGTCGCCACCGCTGCTGCCAACGCCATCCGAAGCACCGCCAATCCCCCGGCGTTTGCTCTCTTTGCTTGACCGAAAAGCTCTCGCGCATCCTCTCCACGAATGCTTCGTCGCGGGAACTCTCCGACTCTCCTTCTTCCTCTTCATGTTCCTCTTCTTATGACTCCTCTCCTTCCTCTTGTTCTTCGCCCGACCGGCCTCGTGCTAGGGCTAGCTTCGTGTTTTCGGCGCCTTCGATCTTTAAGAAGAGTAGATCGATGGCGTTTGGGACGAGACCGAGGCGGGGAACGGAGAGCGAAAAGAAGAGTACGTTAGGGTTTTGTTGGAGGTTTTTGAGTCGGCCGAGCAATAAGGGGATGGAAATGGAGAAGGCTTTGATGCGCTCCACAACTGTTGTCCTCCACACCAACGTGCATGGCTGA

Coding sequence (CDS)

ATGGCAACTCTTCACAAATTCAAATCTAATCTCGACGACCGCCGTCGCCACCGCTGCTGCCAACGCCATCCGAAGCACCGCCAATCCCCCGGCGTTTGCTCTCTTTGCTTGACCGAAAAGCTCTCGCGCATCCTCTCCACGAATGCTTCGTCGCGGGAACTCTCCGACTCTCCTTCTTCCTCTTCATGTTCCTCTTCTTATGACTCCTCTCCTTCCTCTTGTTCTTCGCCCGACCGGCCTCGTGCTAGGGCTAGCTTCGTGTTTTCGGCGCCTTCGATCTTTAAGAAGAGTAGATCGATGGCGTTTGGGACGAGACCGAGGCGGGGAACGGAGAGCGAAAAGAAGAGTACGTTAGGGTTTTGTTGGAGGTTTTTGAGTCGGCCGAGCAATAAGGGGATGGAAATGGAGAAGGCTTTGATGCGCTCCACAACTGTTGTCCTCCACACCAACGTGCATGGCTGA

Protein sequence

MATLHKFKSNLDDRRRHRCCQRHPKHRQSPGVCSLCLTEKLSRILSTNASSRELSDSPSSSSCSSSYDSSPSSCSSPDRPRARASFVFSAPSIFKKSRSMAFGTRPRRGTESEKKSTLGFCWRFLSRPSNKGMEMEKALMRSTTVVLHTNVHG

Homology

[Close]

BLAST of Sed0027320 vs. NCBI nr
Match: XP_023524412.1 (uncharacterized protein LOC111788316 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 161.8 bits (408), Expect = 4.8e-36
Identity = 106/163 (65.03%), Postives = 123/163 (75.46%), Query Frame = 0


Query: 1   MATLHKFKSNLDDRRRHR---CCQRHPKHRQSPGVCSLCLTEKLSRILSTNASSRELSDS 60
           MA LHK KS+ DD RRHR   CC+RHPKHRQSPGVCSLCLTEKLS+ILS   SSR++SDS
Sbjct: 1   MANLHKSKSDYDDLRRHRRCCCCKRHPKHRQSPGVCSLCLTEKLSQILSATTSSRKISDS 60

Query: 61  -PSSSSCSSSYDSSP---SSCSSPDRPRARASFVFSAPSIFKKSRSMAFGTRPRRGTESE 120
             SSSS SSSY SS    SSCSSP+RP  +A    +A SI+KKSRSMAF +R RRGT+S+
Sbjct: 61  LSSSSSDSSSYYSSVSSCSSCSSPNRPYDKA----TASSIYKKSRSMAFASRFRRGTDSD 120

Query: 121 --KKSTLGFCWRFLSRPSNKGMEMEKALMRS-TTVVLHTNVHG 154
             KKS LGF  RFL+RP  K ME+E+ALM S T+ V+  NVHG
Sbjct: 121 SGKKSHLGFWSRFLNRPRRKRMELEEALMHSRTSAVVQGNVHG 159

[Close]

BLAST of Sed0027320 vs. NCBI nr
Match: XP_022940504.1 (uncharacterized protein LOC111446076 [Cucurbita moschata])

HSP 1 Score: 159.1 bits (401), Expect = 3.1e-35
Identity = 103/163 (63.19%), Postives = 121/163 (74.23%), Query Frame = 0


Query: 1   MATLHKFKSNLDDRRRHR---CCQRHPKHRQSPGVCSLCLTEKLSRILSTNASSRELSDS 60
           MA LHK KS+ DD RRHR   CC+RHPKHRQSPGVCSLCLTEKLS+ILS   SSR++SDS
Sbjct: 1   MANLHKSKSDYDDLRRHRRCCCCKRHPKHRQSPGVCSLCLTEKLSQILSATTSSRKISDS 60

Query: 61  PSSSSCSS----SYDSSPSSCSSPDRPRARASFVFSAPSIFKKSRSMAFGTRPRRGTESE 120
            SSSS  S    S  SS SSCSSP+RP  +A    +A SI+KKSRSMAF +R RRGT+S+
Sbjct: 61  LSSSSSDSYSYYSSVSSCSSCSSPNRPYDKA----TASSIYKKSRSMAFASRFRRGTDSD 120

Query: 121 --KKSTLGFCWRFLSRPSNKGMEMEKALMRS-TTVVLHTNVHG 154
             KKS LGF  RFL+RP  K ME+E+ALM S ++ V+  NVHG
Sbjct: 121 SGKKSHLGFWSRFLNRPRRKRMELEEALMHSRSSAVVQGNVHG 159

[Close]

BLAST of Sed0027320 vs. NCBI nr
Match: KAG6608260.1 (hypothetical protein SDJN03_01602, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 154.5 bits (389), Expect = 7.6e-34
Identity = 100/160 (62.50%), Postives = 119/160 (74.38%), Query Frame = 0


Query: 1   MATLHKFKSNLDDRRRHR---CCQRHPKHRQSPGVCSLCLTEKLSRILSTNASSRELSDS 60
           MA LHK KS+ DD RRHR   CC+RHPKHRQSPGVCSLCLTEKLS+IL+   SSR++SDS
Sbjct: 1   MANLHKSKSDYDDLRRHRRCCCCKRHPKHRQSPGVCSLCLTEKLSQILTATTSSRKISDS 60

Query: 61  -PSSSSCSSSYDSSPSSCSSPDRPRARASFVFSAPSIFKKSRSMAFGTRPRRGTESE--K 120
             SSSS SSSY SS SSCSS   P  R     +A S++KKSRSMAF +R RRGT+S+  K
Sbjct: 61  LSSSSSDSSSYYSSVSSCSSCSSPN-RLYDKATASSMYKKSRSMAFASRFRRGTDSDSGK 120

Query: 121 KSTLGFCWRFLSRPSNKGMEMEKALMRS-TTVVLHTNVHG 154
           KS LGF  RFL+RP  K ME+++ALM S ++ V+  NVHG
Sbjct: 121 KSHLGFWSRFLNRPRRKRMELDEALMHSRSSAVVQGNVHG 159

[Close]

BLAST of Sed0027320 vs. NCBI nr
Match: XP_022981929.1 (uncharacterized protein LOC111480927 [Cucurbita maxima])

HSP 1 Score: 153.3 bits (386), Expect = 1.7e-33
Identity = 103/162 (63.58%), Postives = 119/162 (73.46%), Query Frame = 0


Query: 1   MATLHKFKSNLDDRRRHR--CCQRHPKHRQSPGVCSLCLTEKLSRILSTNASSRELSDS- 60
           MA LHK KS+ DD RR R  CC+RHPKHRQSPGVCSLCLTEKLS+ILS   SSR+ SDS 
Sbjct: 1   MANLHKSKSDYDDLRRRRCGCCKRHPKHRQSPGVCSLCLTEKLSQILSATTSSRKNSDSL 60

Query: 61  PSSSSCSSSYDSSP---SSCSSPDRPRARASFVFSAPSIFKKSRSMAFGTRPRRGTESE- 120
            SSSS SSSY SS    SSCSSP+RP  +A    +A SI+KKSRS+AF  R RRG +S+ 
Sbjct: 61  SSSSSDSSSYYSSVSSCSSCSSPNRPYDKA----TASSIYKKSRSLAFALRFRRGADSDS 120

Query: 121 -KKSTLGFCWRFLSRPSNKGMEMEKALMRS-TTVVLHTNVHG 154
            KKS LGF  RFL+RP  K ME+E+ALM S T+ V+  NVHG
Sbjct: 121 GKKSHLGFWSRFLNRPRRKRMELEEALMHSRTSAVVQGNVHG 158

[Close]

BLAST of Sed0027320 vs. NCBI nr
Match: KAG7024556.1 (hypothetical protein SDJN02_13373, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 145.6 bits (366), Expect = 3.5e-31
Identity = 99/163 (60.74%), Postives = 112/163 (68.71%), Query Frame = 0


Query: 1   MATLHKFKSNLDDRRRHRCCQRHPKHRQSPGVCSLCLTEKLSRILSTNASSRELSDSPSS 60
           MA  H+ KS+ DDRRR   C+RHPKH QSPGVCSLCL EKLS+I+ST  SSR++SDS  S
Sbjct: 1   MANFHRSKSDYDDRRR---CKRHPKHHQSPGVCSLCLAEKLSQIVSTK-SSRKVSDS-LS 60

Query: 61  SSCSSSYDSSPSSCSSPDRPR--------ARASFVFSAPSIFKKSRSMAFGTRPRRGTES 120
           SSCSSSY SS SSCSS   P          R +FVFSA SIFKKSRSMAF  R RRGTES
Sbjct: 61  SSCSSSYYSSASSCSSCSSPNPPYGYNTDRRKAFVFSASSIFKKSRSMAFAPRLRRGTES 120

Query: 121 E--KKSTLGFCWRFLSRPSNKGMEMEKALMRSTTVVLHTNVHG 154
           +  K + LGF  + L RP  K ME E+ LM S TVV   +VHG
Sbjct: 121 DSGKNNNLGFWSKILRRPRRKIMEFEEVLMHSRTVV-QRDVHG 157

[Close]

BLAST of Sed0027320 vs. ExPASy TrEMBL
Match: A0A6J1FKF2 (uncharacterized protein LOC111446076 OS=Cucurbita moschata OX=3662 GN=LOC111446076 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.5e-35
Identity = 103/163 (63.19%), Postives = 121/163 (74.23%), Query Frame = 0


Query: 1   MATLHKFKSNLDDRRRHR---CCQRHPKHRQSPGVCSLCLTEKLSRILSTNASSRELSDS 60
           MA LHK KS+ DD RRHR   CC+RHPKHRQSPGVCSLCLTEKLS+ILS   SSR++SDS
Sbjct: 1   MANLHKSKSDYDDLRRHRRCCCCKRHPKHRQSPGVCSLCLTEKLSQILSATTSSRKISDS 60

Query: 61  PSSSSCSS----SYDSSPSSCSSPDRPRARASFVFSAPSIFKKSRSMAFGTRPRRGTESE 120
            SSSS  S    S  SS SSCSSP+RP  +A    +A SI+KKSRSMAF +R RRGT+S+
Sbjct: 61  LSSSSSDSYSYYSSVSSCSSCSSPNRPYDKA----TASSIYKKSRSMAFASRFRRGTDSD 120

Query: 121 --KKSTLGFCWRFLSRPSNKGMEMEKALMRS-TTVVLHTNVHG 154
             KKS LGF  RFL+RP  K ME+E+ALM S ++ V+  NVHG
Sbjct: 121 SGKKSHLGFWSRFLNRPRRKRMELEEALMHSRSSAVVQGNVHG 159

[Close]

BLAST of Sed0027320 vs. ExPASy TrEMBL
Match: A0A6J1J366 (uncharacterized protein LOC111480927 OS=Cucurbita maxima OX=3661 GN=LOC111480927 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 8.2e-34
Identity = 103/162 (63.58%), Postives = 119/162 (73.46%), Query Frame = 0


Query: 1   MATLHKFKSNLDDRRRHR--CCQRHPKHRQSPGVCSLCLTEKLSRILSTNASSRELSDS- 60
           MA LHK KS+ DD RR R  CC+RHPKHRQSPGVCSLCLTEKLS+ILS   SSR+ SDS 
Sbjct: 1   MANLHKSKSDYDDLRRRRCGCCKRHPKHRQSPGVCSLCLTEKLSQILSATTSSRKNSDSL 60

Query: 61  PSSSSCSSSYDSSP---SSCSSPDRPRARASFVFSAPSIFKKSRSMAFGTRPRRGTESE- 120
            SSSS SSSY SS    SSCSSP+RP  +A    +A SI+KKSRS+AF  R RRG +S+ 
Sbjct: 61  SSSSSDSSSYYSSVSSCSSCSSPNRPYDKA----TASSIYKKSRSLAFALRFRRGADSDS 120

Query: 121 -KKSTLGFCWRFLSRPSNKGMEMEKALMRS-TTVVLHTNVHG 154
            KKS LGF  RFL+RP  K ME+E+ALM S T+ V+  NVHG
Sbjct: 121 GKKSHLGFWSRFLNRPRRKRMELEEALMHSRTSAVVQGNVHG 158

[Close]

BLAST of Sed0027320 vs. ExPASy TrEMBL
Match: A0A6J1IHL9 (uncharacterized protein LOC111476165 OS=Cucurbita maxima OX=3661 GN=LOC111476165 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 2.2e-31
Identity = 100/163 (61.35%), Postives = 111/163 (68.10%), Query Frame = 0


Query: 1   MATLHKFKSNLDDRRRHRCCQRHPKHRQSPGVCSLCLTEKLSRILSTNASSRELSDSPSS 60
           MA  HK KS+ DDRRR   C+RHPKH QSPGVCSLCL EKLS+I+S   SSR++SDS  S
Sbjct: 1   MANFHKSKSDYDDRRR---CKRHPKHHQSPGVCSLCLAEKLSQIVSA-TSSRKVSDS-LS 60

Query: 61  SSCSSSYDSSPSSCSSPDRPR--------ARASFVFSAPSIFKKSRSMAFGTRPRRGTES 120
           SSCSSSY SS SSCSS   P          R +FVFSA SIFKKSRSMAF  R +R TES
Sbjct: 61  SSCSSSYYSSASSCSSCSSPNPPYGYNTDRRKAFVFSASSIFKKSRSMAFAPRLKRETES 120

Query: 121 E--KKSTLGFCWRFLSRPSNKGMEMEKALMRSTTVVLHTNVHG 154
           +  K S LGF  RFL RP  K ME E+ LM S TVV   +VHG
Sbjct: 121 DSGKNSNLGFWSRFLRRPRRKIMEFEEVLMHSRTVV-QRDVHG 157

[Close]

BLAST of Sed0027320 vs. ExPASy TrEMBL
Match: A0A6J1FD38 (uncharacterized protein LOC111443018 OS=Cucurbita moschata OX=3662 GN=LOC111443018 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 3.8e-31
Identity = 98/163 (60.12%), Postives = 112/163 (68.71%), Query Frame = 0


Query: 1   MATLHKFKSNLDDRRRHRCCQRHPKHRQSPGVCSLCLTEKLSRILSTNASSRELSDSPSS 60
           MA  H+ KS+ DDRRR   C+RHPKH QSPGVCSLCL EKLS+I+ST  SSR++SDS  S
Sbjct: 1   MANFHRSKSDYDDRRR---CKRHPKHHQSPGVCSLCLAEKLSQIVSTK-SSRKVSDS-LS 60

Query: 61  SSCSSSYDSSPSSCSSPDRPR--------ARASFVFSAPSIFKKSRSMAFGTRPRRGTES 120
           SSCS+SY SS SSCSS   P          R +FVFSA SIFKKSRSMAF  R RRGTES
Sbjct: 61  SSCSTSYYSSASSCSSCSSPNPPYGYNTDRRKAFVFSASSIFKKSRSMAFAPRLRRGTES 120

Query: 121 E--KKSTLGFCWRFLSRPSNKGMEMEKALMRSTTVVLHTNVHG 154
           +  K + LGF  + L RP  K ME E+ LM S TVV   +VHG
Sbjct: 121 DSGKNNNLGFWSKILRRPRRKIMEFEEVLMHSRTVV-QRDVHG 157

[Close]

BLAST of Sed0027320 vs. ExPASy TrEMBL
Match: A0A0A0LJL6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G889870 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 3.7e-26
Identity = 96/177 (54.24%), Postives = 111/177 (62.71%), Query Frame = 0


Query: 1   MATLHKFKSNLDDRR----RHRCCQRHPKHRQSPGVCSLCLTEKLSRILSTNASSR-ELS 60
           MA  H  KS++D RR    RH  CQRHP H QSPGVCSLCLTEKLSRI++  ASSR ++S
Sbjct: 1   MANFHSSKSDVDHRRTRNHRHHHCQRHPNHHQSPGVCSLCLTEKLSRIIAPAASSRNKIS 60

Query: 61  DSPSSSSCSSSYDS----SPSSCSSP----------DRPRARASFVFSAPSIFKKSRSMA 120
           +S SSSS SS Y S    S SS SSP            PR + +FVFSA SIFKKS++MA
Sbjct: 61  NSLSSSSSSSYYSSCSSASSSSSSSPKLYGYYNSDNHHPRRKTAFVFSASSIFKKSKTMA 120

Query: 121 FGTRPRRGTESE--KKST---LGFCWRFLSRPSNKGMEMEKALMRSTTVVLHTNVHG 154
              R    TES+  KKS    LGF  RFL+R   K ME ++ LMRS TVV   NVHG
Sbjct: 121 RLKRGITTTESDCGKKSNNTDLGFWSRFLNRHRLKRMEFQEVLMRSRTVVQRNNVHG 177

[Close]

BLAST of Sed0027320 vs. TAIR 10
Match: AT1G35210.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF740 (InterPro:IPR008004); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22470.1); Has 83 Blast hits to 83 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 54.7 bits (130), Expect = 7.7e-08
Identity = 47/127 (37.01%), Postives = 66/127 (51.97%), Query Frame = 0


Query: 8   KSNLDDRRRHRC-CQRHPKHRQSPGVCSLCLTEKLSRILSTNASSRELS------DSPSS 67
           K+  +D+ ++   C++HPKHRQSPGVCSLCL E+LS  +   +S R  S       S ++
Sbjct: 18  KNKAEDKTKNAVFCKKHPKHRQSPGVCSLCLNERLSLFIKAASSRRPRSRQILSTSSSTT 77

Query: 68  SSCSSSYDSSPSSCSSPDRPRARASFVFSAP-------SIFKKSRSMAFGTRPRRGTESE 121
           SS SS   SS SSC SP   R R   +           S   KSRS+A+     +  + +
Sbjct: 78  SSLSSDGSSSVSSCPSPIVDRRRYLLMSGGSGRGEKVISWMTKSRSVAYKVDDEKRRKKK 137

[Close]

BLAST of Sed0027320 vs. TAIR 10
Match: AT1G72240.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22470.1); Has 65 Blast hits to 63 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 51.2 bits (121), Expect = 8.5e-07
Identity = 38/77 (49.35%), Postives = 46/77 (59.74%), Query Frame = 0


Query: 20 CQRHPKHRQSPGVCSLCLTEKLSRI-------------LSTNASSRELSDSPSSSSCSSS 79
          C++H KHRQSPG+CSLCLTE+LS++              +T   S   S S S SSC SS
Sbjct: 24 CKKHTKHRQSPGICSLCLTERLSKLSLEYYDYTKKAVETATYCGSTSTSSSSSVSSCYSS 83

Query: 80 YDSSPSSCSSPDRPRAR 84
            SS SSCSSP + R R
Sbjct: 84 --SSVSSCSSPLQYRYR 98

[Close]

BLAST of Sed0027320 vs. TAIR 10
Match: AT1G22470.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72240.1); Has 1693 Blast hits to 236 proteins in 54 species: Archae - 0; Bacteria - 8; Metazoa - 451; Fungi - 116; Plants - 94; Viruses - 2; Other Eukaryotes - 1022 (source: NCBI BLink). )

HSP 1 Score: 49.7 bits (117), Expect = 2.5e-06
Identity = 34/77 (44.16%), Postives = 45/77 (58.44%), Query Frame = 0


Query: 20  CQRHPKHRQSPGVCSLCLTEKLSRI-------------------LSTNASSRELSDSPSS 78
           C++HPKHRQSPG+CSLCL E LS++                   +S+ +S+   S+S  S
Sbjct: 41  CKKHPKHRQSPGICSLCLNESLSKLSSEFYDYSSSMSSSSLAKTMSSCSSASSESESDFS 100

The following BLAST results are available for this feature:

BLAST of Sed0027320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023524412.1	4.8e-36	65.03	uncharacterized protein LOC111788316 [Cucurbita pepo subsp. pepo]	[more]
XP_022940504.1	3.1e-35	63.19	uncharacterized protein LOC111446076 [Cucurbita moschata]	[more]
KAG6608260.1	7.6e-34	62.50	hypothetical protein SDJN03_01602, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022981929.1	1.7e-33	63.58	uncharacterized protein LOC111480927 [Cucurbita maxima]	[more]
KAG7024556.1	3.5e-31	60.74	hypothetical protein SDJN02_13373, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Sed0027320 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0027320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FKF2	1.5e-35	63.19	uncharacterized protein LOC111446076 OS=Cucurbita moschata OX=3662 GN=LOC1114460...	[more]
A0A6J1J366	8.2e-34	63.58	uncharacterized protein LOC111480927 OS=Cucurbita maxima OX=3661 GN=LOC111480927...	[more]
A0A6J1IHL9	2.2e-31	61.35	uncharacterized protein LOC111476165 OS=Cucurbita maxima OX=3661 GN=LOC111476165...	[more]
A0A6J1FD38	3.8e-31	60.12	uncharacterized protein LOC111443018 OS=Cucurbita moschata OX=3662 GN=LOC1114430...	[more]
A0A0A0LJL6	3.7e-26	54.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G889870 PE=4 SV=1	[more]

BLAST of Sed0027320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G35210.1	7.7e-08	37.01	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G72240.1	8.5e-07	49.35	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G22470.1	2.5e-06	44.16	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..79
None	No IPR available	PANTHER	PTHR34046:SF7	OS06G0218800 PROTEIN	coord: 9..146
None	No IPR available	PANTHER	PTHR34046	OS06G0218800 PROTEIN	coord: 9..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0027320.1	Sed0027320.1	mRNA