Sed0027273 (gene) Chayote v1

Overview


Name	Sed0027273
Type	gene
Organism	Sechium edule (Chayote v1)
Description	vesicle-associated protein 2-1
Location	LG04: 31377033 .. 31381684 (-)
RNA-Seq Expression	Sed0027273
Synteny	Sed0027273

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGGCGTTGGTTTTGAACCCAACACGTAACTTTAGACACTTGTGGGGAATTTCTCTCTCCTTTTTTTTGTTTCTCTCTCTAGTTTTCAGTGAAGCTGTGCAGTAGCCATCGGAGAGGTTACCAGACAAGTTTTTCGCTAAACCTCTTTTTTCGCCCTCTATTTGGCCATCTTTCGCTCTCTCTCATCGCCGATCCCGCTTCTATGCCTTGATTTTCGAAACCCCCCCTTTGTATTTCTTTTCCTTTCAATTTGGACCCATCAATCCATACTCGTTCCGGGATTTTGGGATTTCTTTTGTTTTTGTTCGTGGGTTGTTTTTTAATTCTTGGTTCTTGGAGTAAAACGCCGTAACTCGGTGGAATTTTGTTCTTGGGTTTGTTTTTTGATCTGGGTTTGTGCCATCATGAGTGCTGGAAGTGGGAATCGGTTAATCTCCGTTCAGCCGGATGAGTTGAAGTTTCAGAGTATGTCATTTTTGGTTTCATGTTTCTGTTTATTGTATCGGATTTGCACTTGTTGTTCGTTTGATTCTTGGGTTGTTTTTTGTTTTCTTAGAGATGGTTGATTTTGTTCATTCTTGTCGTGAGAGGAGTGAGATGATGATTAGGGCTTGGATTTATGTGGAGGGAGTTGAGAGAAACTCCCAATTCTATCACTGAACGTTTTTTTGCAGGTCTTCTTAGTTGTTATTATTCATAATGGTTGATGATTTCATAGGAGAAAATTGTCACGTATTCTGTCACACTTTTAATTTCCTTACACTGTTGAGATTTATAGTGTTTGTGCTTTTTACTCTAGCCAAATGATTTCTTCAGCCCTTCCCCTGTTTCACTGTTCATCTTGCCACTTTTAGCCTCTCCTTGTCTTTTTTATTTTTGAACTTTTTTTCCTCATGAGTCACAAAGACTCCAGGCTTCTAGCATTTTCATGGAGGTGTAAAATTTTTTTTTGATAGTCATAAGCGAATGAAAAGAAGGTCTGTGGCCTGATTCGTGGTGTCTAGGCTATAGCTTATGCGATCCTCGTTTATTCTCCAAAGACCTGACCTTATTACATTTGTTAGTTAACAAAACTCGTTAATTCTTAAAAAGATGGTCATCACGGATGAAACTCATTCCCTCTAAGTCCCTCTAAGTAGTTTATGATGATCAAGATCCTTATTTGATCATTAGATTCACCCATGGGTGGATACAGTTAGTGTGGCTCAATGTTTGTGTTGTTCATTGAACTCAAATGATCACTTTTTTTTTTTTATATCCGTGACTTTCCGAGCAGCTTGCGGATGATCACTCTGTTGTATTACGTATACTATGTGTTCGAATATTAGACTATTTCCTGGCATGAGATTTGATCCTTTTGGTATATGAATTTTTTAACCACAAGAAATTGTATACAATGCTTCTTTCTTTCGAATCCCAAATGCCTTCCAGTTTGGTCCATGGCTTACCTCAATTCTTGGAATCTAATAGTCTCTATGCTTAGGAAAAAATCGAAGAACCTTGTCATATCCATGTGTTTTACCACCCAATGTATTTTATCAAAGAAAAGATGAAGGTTGTTCATTTTGTGCTTTTGTTGGTTCATGAATAAGGTTTTATTGTATTCTTATAAGTGGTTACGACTGATTTTCTGGTGGACCTTTTTGTGTATTTTGAACTCATGAACGTGGCCTTTATATCATCAGTTGAGTTGGACAAGCAGAGCTTTTGTGATCTTAAAGTTGCAAACAACACAGAACATCATGTTGTCTTTAAGGTGGTTGTTTGATTATTTAAAATTGCTCATATAACTGAAATCCAATATCTATTTTGGAAATCATTTTGCAGGTTTTATAGTTGGTTTAACTTCAAACGTATTTTGTTCATGCTAGGTCAAAACAACCTCACCCAAGAAATACTTTGTGCGTCCCAACACTGGTGTTGTACAGCCTTGGGATTCTTGCATCATAAGAGGTCTTAATTGTTGTTTAAGCTTTTTTATTTTTATGACTGCTATGATTCTTTGGATGCAATTGCAATAAAATGGCAAAGATTCTTTCTTGTCCCTCAATTATATATTTATGGCCTGGGGTTCAAGCTTGAAAGAAAAATAATGCTGATTCATTTGAAATTGGAAAATCTTTTGTGGTTTTTTTTTTTACCACATCATGTAAACTAGTGGGTGGCCTTGATAAATAAGTTTTCCTCAGTCAAGTGCCCTTTTGATTCGCCAACGTTTATCTGTAAAACTAACGTCGAGTTGCTGTGCATTCACAGTGACTCTCCAAGCCATGCGAGAGTACCCTGCAGATATGCATTGCAAAGATAAGTTTCTCTTACAAAGTACAATAGTCCCTCCAAATACTGATGTAGATGAGCTTCCGGCTGATGCTGTAAGAATATTGGCTTTGGCCTTAGTTTGAATGGACATTCATTTCATTCTATTAAGCTCGATTGGAATTTTATTTTCTCATTTTCAGTTCAGTAAGGAGAGTGGACGGACTATCGAGGAATGCAAGCTTAAGGTTATCTATATGTCTCCTAATTCAGATATGGGGAACCCAGAAGATGAAAAGAACTCATCTCAAAGCTCCTCTGTGAGTGCTGAAATTCTCTTCTTTGTCCCCTGCATTTGTAATTCTTTCCTTTTTAGATCTTTTCTCTTGTCCCACACACATGGGTTGGCTAGTGGTCAACAAGGGCCTTGCAAATATTAAAAAACTTAAAGGACATGTGTTCAAGTCATGTGGTTATCTACCTATAATTTTATATCCTACAAGTTACCTCAACTAAATATAGGAGGATTGGACAATTGTCTATGAGAATAGTTGAACGGGTATTAAAAAGAAAGATTGTAATAAGCGCTTGCTATAGATATAGATTAAGATAAAGAATTTCTCAAAAAGAAATGTTGACATTACGAATTTGAAATATCCCCTTTATTCTATGCTTTCATATTTTTATTAAATATCTTTTTTTTTAGACATTTACTGCCATAGGTGCCTACAAATTCATAAGCTGTTTGCCCTACTGATTATGTGTAATTAAATGGAGGATCCATAAAAAAAAAAAAAATTTAAAATTAAGCTATTTATAAAGATTCATCACACAGAAAGCCACGCTTGCTTAAAATTTCATTTTATTTATTTATTTGATATCCGTGACTATCCGAGCCCGTTTGCGCGTACCTTGACTACACCTGACCTTACAACATTTGGATGCCAAGAAAATTCATAGGAAATTAATTCCTAGGTAGGTGGCCACCATGAATTGAATCCATCACCTTAAATATCTCAAATCTCTCTTTGACCACTTAGGGGCCACTCTATGATGGTTGCTCGCTTGAAATTTTACAAACAAGAATAGTTTTTTTTTTCTTTTTTTCTATTTTCTTAATCTCATATACTATCTTGTGATAACACCAGCTGGCCTTGCAACGTCTGAAGGAAGAAAGAGACACGGTTATAAAGCAAACCCAACAATTACAACAGGAACTGGTGAGTTACCCCTATTTGCTCTATTTTGCTTCCTTGCTACTCTTGCATAACCAAAAGTTGCTTAACTTGTTCAGTGCATAGTTAGTTCATATAGTATGAGCTTAATTGAAACGTGGGGCGTAAATTTTGAAATGTGTTTGAATCTGAAATTTTCTGACTCGTATGCTTTTGACAGATGATTAGTAAATAAGCAATACCGTCATTATAATTTGAGGATAAAGTCTATTCATGTTTGTTAAATCCACCTACAACTATAACCATGAACACCAACTTTGCTATTGAAGGGGAATGGTTTGATCTATTTGGTTGTCTTTTATACATGTGGAGTTCCATATTATCTTGAGGAGAACTGTTTTAATTCAATTTAATATTATATTCCTTTCTTCGATATTGAGATAAAGTATATATTTATGATTAAGAGAGTATGGGTTTGAATACTATTTTAATGATATGGATCCATTTGTTTCTTTTTTTTATTTAAGATAATAATTGGACCAATAGGGAGAGCGTAAAGTGAGACCGATATCACACTAATCCTTGGAGAGTTCTTACCCTACTCAAGTCCAGCTCTGAAATACAATAAAGATTTTAAAGTAGTTATATTTTTAGCATTGACCTCTTAGTAGCTGATTGTTATCAAGAAATGGAAAAAGACCCATTTTTTTAGATTAGCCATTTGTTTCTTTATAAGCAATGTAGAATGTATATAACAACTTAGTACTTTATACCAATTACTCTCCCACAGGACATGATGAAGAGACGTAAACATCGAAAAGGCGATCCTGGATTCTCGTTTATGTTCGCGATCTTTGTGGGAATCGTTGGGATCATGGCAGGTTTCCTCTTGAATCTCACATTATCTTCACCATCTACGGAATGACTTTGGACCATATATTTCAGATCCTGAGCAGACAATTTTCTGGTCTTGTATAATTTCTACTTCCCAATTTTTGTATATTAAGAAATGCCGCAAATTTGTGGTCTTGATACGTTAATTTTTCAGCAAAAAGAAAATGTTGATTTTTGTGCCAATTGTGACTATAAATGCTGCTGGTGTTCACTCCTCCCAAACTGAGGTTGAGAGAAGCTAAGTCTTATCTCTTCTTTTATATAATTAAATACTGTGGTGTTTGTGGATGTAATTTGTGCATGTAATATGAATTTGTAGTAATTCA

mRNA sequence

ATTGGCGTTGGTTTTGAACCCAACACGTAACTTTAGACACTTGTGGGGAATTTCTCTCTCCTTTTTTTTGTTTCTCTCTCTAGTTTTCAGTGAAGCTGTGCAGTAGCCATCGGAGAGGTTACCAGACAAGTTTTTCGCTAAACCTCTTTTTTCGCCCTCTATTTGGCCATCTTTCGCTCTCTCTCATCGCCGATCCCGCTTCTATGCCTTGATTTTCGAAACCCCCCCTTTGTATTTCTTTTCCTTTCAATTTGGACCCATCAATCCATACTCGTTCCGGGATTTTGGGATTTCTTTTGTTTTTGTTCGTGGGTTGTTTTTTAATTCTTGGTTCTTGGAGTAAAACGCCGTAACTCGGTGGAATTTTGTTCTTGGGTTTGTTTTTTGATCTGGGTTTGTGCCATCATGAGTGCTGGAAGTGGGAATCGGTTAATCTCCGTTCAGCCGGATGAGTTGAAGTTTCAGATTGAGTTGGACAAGCAGAGCTTTTGTGATCTTAAAGTTGCAAACAACACAGAACATCATGTTGTCTTTAAGGTCAAAACAACCTCACCCAAGAAATACTTTGTGCGTCCCAACACTGGTGTTGTACAGCCTTGGGATTCTTGCATCATAAGAGTGACTCTCCAAGCCATGCGAGAGTACCCTGCAGATATGCATTGCAAAGATAAGTTTCTCTTACAAAGTACAATAGTCCCTCCAAATACTGATGTAGATGAGCTTCCGGCTGATGCTTTCAGTAAGGAGAGTGGACGGACTATCGAGGAATGCAAGCTTAAGGTTATCTATATGTCTCCTAATTCAGATATGGGGAACCCAGAAGATGAAAAGAACTCATCTCAAAGCTCCTCTCTGGCCTTGCAACGTCTGAAGGAAGAAAGAGACACGGTTATAAAGCAAACCCAACAATTACAACAGGAACTGGACATGATGAAGAGACGTAAACATCGAAAAGGCGATCCTGGATTCTCGTTTATGTTCGCGATCTTTGTGGGAATCGTTGGGATCATGGCAGGTTTCCTCTTGAATCTCACATTATCTTCACCATCTACGGAATGACTTTGGACCATATATTTCAGATCCTGAGCAGACAATTTTCTGGTCTTGTATAATTTCTACTTCCCAATTTTTGTATATTAAGAAATGCCGCAAATTTGTGGTCTTGATACGTTAATTTTTCAGCAAAAAGAAAATGTTGATTTTTGTGCCAATTGTGACTATAAATGCTGCTGGTGTTCACTCCTCCCAAACTGAGGTTGAGAGAAGCTAAGTCTTATCTCTTCTTTTATATAATTAAATACTGTGGTGTTTGTGGATGTAATTTGTGCATGTAATATGAATTTGTAGTAATTCA

Coding sequence (CDS)

ATGAGTGCTGGAAGTGGGAATCGGTTAATCTCCGTTCAGCCGGATGAGTTGAAGTTTCAGATTGAGTTGGACAAGCAGAGCTTTTGTGATCTTAAAGTTGCAAACAACACAGAACATCATGTTGTCTTTAAGGTCAAAACAACCTCACCCAAGAAATACTTTGTGCGTCCCAACACTGGTGTTGTACAGCCTTGGGATTCTTGCATCATAAGAGTGACTCTCCAAGCCATGCGAGAGTACCCTGCAGATATGCATTGCAAAGATAAGTTTCTCTTACAAAGTACAATAGTCCCTCCAAATACTGATGTAGATGAGCTTCCGGCTGATGCTTTCAGTAAGGAGAGTGGACGGACTATCGAGGAATGCAAGCTTAAGGTTATCTATATGTCTCCTAATTCAGATATGGGGAACCCAGAAGATGAAAAGAACTCATCTCAAAGCTCCTCTCTGGCCTTGCAACGTCTGAAGGAAGAAAGAGACACGGTTATAAAGCAAACCCAACAATTACAACAGGAACTGGACATGATGAAGAGACGTAAACATCGAAAAGGCGATCCTGGATTCTCGTTTATGTTCGCGATCTTTGTGGGAATCGTTGGGATCATGGCAGGTTTCCTCTTGAATCTCACATTATCTTCACCATCTACGGAATGA

Protein sequence

MSAGSGNRLISVQPDELKFQIELDKQSFCDLKVANNTEHHVVFKVKTTSPKKYFVRPNTGVVQPWDSCIIRVTLQAMREYPADMHCKDKFLLQSTIVPPNTDVDELPADAFSKESGRTIEECKLKVIYMSPNSDMGNPEDEKNSSQSSSLALQRLKEERDTVIKQTQQLQQELDMMKRRKHRKGDPGFSFMFAIFVGIVGIMAGFLLNLTLSSPSTE

Homology

[Close]

BLAST of Sed0027273 vs. NCBI nr
Match: XP_008448784.1 (PREDICTED: vesicle-associated protein 2-1 [Cucumis melo] >KAA0041052.1 vesicle-associated protein 2-1 [Cucumis melo var. makuwa] >TYK12062.1 vesicle-associated protein 2-1 [Cucumis melo var. makuwa])

HSP 1 Score: 387.9 bits (995), Expect = 5.8e-104
Identity = 196/217 (90.32%), Postives = 204/217 (94.01%), Query Frame = 0


Query: 1   MSAGSGNRLISVQPDELKFQIELDKQSFCDLKVANNTEHHVVFKVKTTSPKKYFVRPNTG 60
           MSAG GNRLISVQPDELKFQIELDKQSFCDLKVANNTEHHV FKVKTTSPKKYFVRPNTG
Sbjct: 1   MSAGGGNRLISVQPDELKFQIELDKQSFCDLKVANNTEHHVAFKVKTTSPKKYFVRPNTG 60

Query: 61  VVQPWDSCIIRVTLQAMREYPADMHCKDKFLLQSTIVPPNTDVDELPADAFSKESGRTIE 120
           VVQPWDSCIIRVTLQAMREYPADM CKDKFLLQSTIVPPNTDVDELP+DAF+K+SGRTIE
Sbjct: 61  VVQPWDSCIIRVTLQAMREYPADMQCKDKFLLQSTIVPPNTDVDELPSDAFNKDSGRTIE 120

Query: 121 ECKLKVIYMSPNSDMGNPEDEKNSSQSSSLALQRLKEERDTVIKQTQQLQQELDMMKRRK 180
           ECKLKVIY+SP S +GN EDEKN SQSSS A+ RLKEERD  I+QT QLQQELDMMKRRK
Sbjct: 121 ECKLKVIYISPTSALGNSEDEKNLSQSSS-AVHRLKEERDMAIRQTHQLQQELDMMKRRK 180

Query: 181 HRKGDPGFSFMFAIFVGIVGIMAGFLLNLTLSSPSTE 218
           +RKGDPGFSF FAIFVGIVGIMAGFLLNLTLSSPSTE
Sbjct: 181 YRKGDPGFSFTFAIFVGIVGIMAGFLLNLTLSSPSTE 216

[Close]

BLAST of Sed0027273 vs. NCBI nr
Match: XP_022938915.1 (vesicle-associated protein 2-1-like isoform X1 [Cucurbita moschata] >XP_023540971.1 vesicle-associated protein 2-1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 387.5 bits (994), Expect = 7.6e-104
Identity = 193/217 (88.94%), Postives = 204/217 (94.01%), Query Frame = 0


Query: 1   MSAGSGNRLISVQPDELKFQIELDKQSFCDLKVANNTEHHVVFKVKTTSPKKYFVRPNTG 60
           MSAG GNRLISVQPDELKFQIEL+KQSFCDLKVANNTEHHV FKVKTTSPKKYFVRPNTG
Sbjct: 1   MSAGGGNRLISVQPDELKFQIELEKQSFCDLKVANNTEHHVAFKVKTTSPKKYFVRPNTG 60

Query: 61  VVQPWDSCIIRVTLQAMREYPADMHCKDKFLLQSTIVPPNTDVDELPADAFSKESGRTIE 120
           VVQPWDSCIIRVTLQA REYPADMHCKDKFLLQSTIVPPNTDVDELP+DAF+KESGRTIE
Sbjct: 61  VVQPWDSCIIRVTLQAQREYPADMHCKDKFLLQSTIVPPNTDVDELPSDAFNKESGRTIE 120

Query: 121 ECKLKVIYMSPNSDMGNPEDEKNSSQSSSLALQRLKEERDTVIKQTQQLQQELDMMKRRK 180
           ECKLKVIYM PNS MGNPEDEKN SQ+S+ A+QRLK+ERD  I+QT QLQQEL M+KRRK
Sbjct: 121 ECKLKVIYMFPNSAMGNPEDEKN-SQNSTQAVQRLKDERDMAIRQTHQLQQELGMLKRRK 180

Query: 181 HRKGDPGFSFMFAIFVGIVGIMAGFLLNLTLSSPSTE 218
           +RKGDPGFSF FAIFVGI+GIMAGFLLNLTLSSP TE
Sbjct: 181 YRKGDPGFSFTFAIFVGIIGIMAGFLLNLTLSSPGTE 216

[Close]

BLAST of Sed0027273 vs. NCBI nr
Match: XP_023005539.1 (vesicle-associated protein 2-1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 387.5 bits (994), Expect = 7.6e-104
Identity = 193/217 (88.94%), Postives = 204/217 (94.01%), Query Frame = 0


Query: 1   MSAGSGNRLISVQPDELKFQIELDKQSFCDLKVANNTEHHVVFKVKTTSPKKYFVRPNTG 60
           MSAG GNRLISVQPDELKFQIEL+KQSFCDLKVANNTEHHV FKVKTTSPKKYFVRPNTG
Sbjct: 1   MSAGGGNRLISVQPDELKFQIELEKQSFCDLKVANNTEHHVAFKVKTTSPKKYFVRPNTG 60

Query: 61  VVQPWDSCIIRVTLQAMREYPADMHCKDKFLLQSTIVPPNTDVDELPADAFSKESGRTIE 120
           VVQPWDSCIIRVTLQA REYPADMHCKDKFLLQSTIVPPNTDVDELP+DAF+KESGRTIE
Sbjct: 61  VVQPWDSCIIRVTLQAQREYPADMHCKDKFLLQSTIVPPNTDVDELPSDAFNKESGRTIE 120

Query: 121 ECKLKVIYMSPNSDMGNPEDEKNSSQSSSLALQRLKEERDTVIKQTQQLQQELDMMKRRK 180
           ECKLKVIYM PNS MGNPEDEKN SQ+S+ A+QRLK+ERD  I+QT QLQQEL M+KRRK
Sbjct: 121 ECKLKVIYMFPNSAMGNPEDEKN-SQNSTQAVQRLKDERDIAIRQTHQLQQELGMLKRRK 180

Query: 181 HRKGDPGFSFMFAIFVGIVGIMAGFLLNLTLSSPSTE 218
           +RKGDPGFSF FAIFVGI+GIMAGFLLNLTLSSP TE
Sbjct: 181 YRKGDPGFSFTFAIFVGIIGIMAGFLLNLTLSSPGTE 216

[Close]

BLAST of Sed0027273 vs. NCBI nr
Match: XP_022155548.1 (vesicle-associated protein 2-1 [Momordica charantia])

HSP 1 Score: 386.7 bits (992), Expect = 1.3e-103
Identity = 195/217 (89.86%), Postives = 203/217 (93.55%), Query Frame = 0


Query: 1   MSAGSGNRLISVQPDELKFQIELDKQSFCDLKVANNTEHHVVFKVKTTSPKKYFVRPNTG 60
           MSAG GNRLISVQPDELKFQIELDKQSFCDLKVANNTEHHV FKVKTTSPKKYFVRPNTG
Sbjct: 1   MSAGGGNRLISVQPDELKFQIELDKQSFCDLKVANNTEHHVAFKVKTTSPKKYFVRPNTG 60

Query: 61  VVQPWDSCIIRVTLQAMREYPADMHCKDKFLLQSTIVPPNTDVDELPADAFSKESGRTIE 120
           VVQPWDSCIIRVTLQA REYP DMHCKDKFLLQSTIVPPNTDVDELPADAF+KESGR IE
Sbjct: 61  VVQPWDSCIIRVTLQAQREYPPDMHCKDKFLLQSTIVPPNTDVDELPADAFNKESGRAIE 120

Query: 121 ECKLKVIYMSPNSDMGNPEDEKNSSQSSSLALQRLKEERDTVIKQTQQLQQELDMMKRRK 180
           ECKLKVIY SP+S +GN EDE+NSSQSSS ALQRLKEERD  I+QT QLQQELDM+KRRK
Sbjct: 121 ECKLKVIYFSPSSALGNSEDERNSSQSSS-ALQRLKEERDMAIRQTHQLQQELDMLKRRK 180

Query: 181 HRKGDPGFSFMFAIFVGIVGIMAGFLLNLTLSSPSTE 218
           +RK DPGFSF FAIFVGIVGIMAGFLLNL+LSSPSTE
Sbjct: 181 YRKSDPGFSFTFAIFVGIVGIMAGFLLNLSLSSPSTE 216

[Close]

BLAST of Sed0027273 vs. NCBI nr
Match: XP_038905973.1 (vesicle-associated protein 2-1 [Benincasa hispida])

HSP 1 Score: 386.3 bits (991), Expect = 1.7e-103
Identity = 195/217 (89.86%), Postives = 204/217 (94.01%), Query Frame = 0


Query: 1   MSAGSGNRLISVQPDELKFQIELDKQSFCDLKVANNTEHHVVFKVKTTSPKKYFVRPNTG 60
           MSAG GNRLISVQPDELKFQIE +KQSFCDLKVANNTEHHV FKVKTTSPKKYFVRPNTG
Sbjct: 1   MSAGGGNRLISVQPDELKFQIEFEKQSFCDLKVANNTEHHVAFKVKTTSPKKYFVRPNTG 60

Query: 61  VVQPWDSCIIRVTLQAMREYPADMHCKDKFLLQSTIVPPNTDVDELPADAFSKESGRTIE 120
           VVQPWDSCIIRVTLQA REYPADM CKDKFLLQSTIVPPNTDVDELP+DAF+K+SGRTIE
Sbjct: 61  VVQPWDSCIIRVTLQAQREYPADMQCKDKFLLQSTIVPPNTDVDELPSDAFNKDSGRTIE 120

Query: 121 ECKLKVIYMSPNSDMGNPEDEKNSSQSSSLALQRLKEERDTVIKQTQQLQQELDMMKRRK 180
           ECKLKVIY+SP S +GN EDEKNSSQSSS A+QRLKEERD  I+QT QLQQELDMMKRRK
Sbjct: 121 ECKLKVIYISPASALGNSEDEKNSSQSSS-AVQRLKEERDMAIRQTHQLQQELDMMKRRK 180

Query: 181 HRKGDPGFSFMFAIFVGIVGIMAGFLLNLTLSSPSTE 218
           +RKGDPGFSF FAIFVGIVGIMAGFLLNLTLSSPSTE
Sbjct: 181 YRKGDPGFSFTFAIFVGIVGIMAGFLLNLTLSSPSTE 216

[Close]

BLAST of Sed0027273 vs. ExPASy Swiss-Prot
Match: Q9LVU1 (Vesicle-associated protein 2-1 OS=Arabidopsis thaliana OX=3702 GN=PVA21 PE=1 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 1.4e-73
Identity = 140/221 (63.35%), Postives = 174/221 (78.73%), Query Frame = 0


Query: 1   MSAGSGNRLISVQPDELKFQIELDKQSFCDLKVANNTEHHVVFKVKTTSPKKYFVRPNTG 60
           M+    N+LIS+QPDELKF  EL+KQS+CDLKVAN TE++V FKVKTTSPKKYFVRPNTG
Sbjct: 1   MTGVGENQLISIQPDELKFLFELEKQSYCDLKVANKTENYVAFKVKTTSPKKYFVRPNTG 60

Query: 61  VVQPWDSCIIRVTLQAMREYPADMHCKDKFLLQSTIVPPNTDVDELPADAFSKESGRTIE 120
           V+QPWDSCIIRVTLQA REYP DM CKDKFLLQSTIVPP+TDVDELP D F+K+SG+T+ 
Sbjct: 61  VIQPWDSCIIRVTLQAQREYPPDMQCKDKFLLQSTIVPPHTDVDELPQDTFTKDSGKTLT 120

Query: 121 ECKLKVIYMSP-----NSDMGNPEDEKNSSQSSSLALQRLKEERDTVIKQTQQLQQELDM 180
           ECKLKV Y++P     +S+ G    +  SS++ S  +QRLKEERD  +KQTQQLQ EL+ 
Sbjct: 121 ECKLKVSYITPSTTQRSSESGATNGDGQSSETIS-TIQRLKEERDAAVKQTQQLQHELET 180

Query: 181 MKRRKH-RKGDPGFSFMFAIFVGIVGIMAGFLLNLTLSSPS 216
           ++RR++ R    G S   A  VG++G++ GF+L LTL+SP+
Sbjct: 181 VRRRRNQRNSGNGLSLKLAAMVGLIGLIIGFILKLTLASPT 220

[Close]

BLAST of Sed0027273 vs. ExPASy Swiss-Prot
Match: Q9SHC8 (Vesicle-associated protein 1-2 OS=Arabidopsis thaliana OX=3702 GN=PVA12 PE=1 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 7.3e-41
Identity = 91/238 (38.24%), Postives = 138/238 (57.98%), Query Frame = 0


Query: 7   NRLISVQPDELKFQIELDKQSFCDLKVANNTEHHVVFKVKTTSPKKYFVRPNTGVVQPWD 66
           N L+++ P +L+F  EL KQ  C L + N T+++V FKVKTT+PKKY VRPNTGVV P  
Sbjct: 3   NELLTIDPVDLQFPFELKKQISCSLYLGNKTDNYVAFKVKTTNPKKYCVRPNTGVVHPRS 62

Query: 67  SCIIRVTLQAMREYPADMHCKDKFLLQSTIVPPNTDVDELPADAFSKESGRTIEECKLKV 126
           S  + VT+QA +E PAD+ CKDKFLLQ  +  P     ++  + FSKE+G  +EE KL+V
Sbjct: 63  SSEVLVTMQAQKEAPADLQCKDKFLLQCVVASPGATPKDVTHEMFSKEAGHRVEETKLRV 122

Query: 127 IYMSPN--------------------SDMGNPED--------------EKNSSQSSSLAL 186
           +Y++P                     SD GN  D              + NSS++ +L +
Sbjct: 123 VYVAPPRPPSPVREGSEEGSSPRASVSDNGNASDFTAAPRFSADRVDAQDNSSEARAL-V 182

Query: 187 QRLKEERDTVIKQTQQLQQELDMMKRRKHRKGDPGFSFMFAIFVGIVGIMAGFLLNLT 211
            +L EE+++ ++   +LQQELD ++R   R    G  FM+ + VG++G++ G+++  T
Sbjct: 183 TKLTEEKNSAVQLNNRLQQELDQLRRESKRSKSGGIPFMYVLLVGLIGLILGYIMKRT 239

[Close]

BLAST of Sed0027273 vs. ExPASy Swiss-Prot
Match: Q84WW5 (Vesicle-associated protein 1-3 OS=Arabidopsis thaliana OX=3702 GN=PVA13 PE=2 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 3.6e-40
Identity = 96/232 (41.38%), Postives = 139/232 (59.91%), Query Frame = 0


Query: 9   LISVQPDELKFQIELDKQSFCDLKVANNTEHH-VVFKVKTTSPKKYFVRPNTGVVQPWDS 68
           L+++ P ELKF  EL KQS C +++ N T    V FKVKTT+P+KY VRPNTGVV P DS
Sbjct: 6   LVNIHPTELKFPFELKKQSSCSMQLTNKTTTQCVAFKVKTTNPRKYCVRPNTGVVLPGDS 65

Query: 69  CIIRVTLQAMREYPADMHCKDKFLLQSTIVPPNTDVDELPADAFSKESGRTIEECKLKVI 128
           C + VT+QA +E P DM CKDKFL+Q+ +V   T   E+ A+ F+KE+GR IE+ KL+V+
Sbjct: 66  CNVTVTMQAQKEAPLDMQCKDKFLVQTVVVSDGTTSKEVLAEMFNKEAGRVIEDFKLRVV 125

Query: 129 YMSPNSDMGNPE--DEKNS---------SQSSSL--------------------ALQRLK 188
           Y+  N     PE  +E NS         SQS+SL                     + +L 
Sbjct: 126 YIPANPPSPVPEGSEEGNSPMASLNDIASQSASLFDDVSRTFEETSEKSSEAWSMISKLT 185

Query: 189 EERDTVIKQTQQLQQELDMMKRRKHRKGDPGFSFMFAIFVGIVGIMAGFLLN 209
           EE+ +  +Q+Q+L+ EL+M+++   +K   G S +  + VG++G + G+LLN
Sbjct: 186 EEKTSATQQSQKLRLELEMLRKETSKKQSGGHSLLLMLLVGLLGCVIGYLLN 237

[Close]

BLAST of Sed0027273 vs. ExPASy Swiss-Prot
Match: Q8VZ95 (Vesicle-associated protein 1-1 OS=Arabidopsis thaliana OX=3702 GN=PVA11 PE=1 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 6.1e-40
Identity = 90/240 (37.50%), Postives = 140/240 (58.33%), Query Frame = 0


Query: 5   SGNRLISVQPDELKFQIELDKQSFCDLKVANNTEHHVVFKVKTTSPKKYFVRPNTGVVQP 64
           S + L++V+P +L+F  EL KQ  C L + N T+++V FKVKTT+PKKY VRPNTGVV P
Sbjct: 18  SNSELLTVEPLDLQFPFELKKQISCSLYLTNKTDNNVAFKVKTTNPKKYCVRPNTGVVLP 77

Query: 65  WDSCIIRVTLQAMREYPADMHCKDKFLLQSTIVPPNTDVDELPADAFSKESGRTIEECKL 124
             +C + VT+QA +E P+DM CKDKFLLQ  I  P     E+  + FSKE+G  +EE KL
Sbjct: 78  RSTCEVLVTMQAQKEAPSDMQCKDKFLLQGVIASPGVTAKEVTPEMFSKEAGHRVEETKL 137

Query: 125 KVIYMSPN--------------------SDMGNPED--------------EKNSSQSSSL 184
           +V Y++P                     SD G+  +              ++N+S++ +L
Sbjct: 138 RVTYVAPPRPPSPVHEGSEEGSSPRASVSDNGHGSEFSFERFIVDNKAGHQENTSEARAL 197

Query: 185 ALQRLKEERDTVIKQTQQLQQELDMMKRRKHRKGDPGFSFMFAIFVGIVGIMAGFLLNLT 211
            + +L EE+ + I+   +LQ+ELD ++R   +    G  FM+ + VG++G++ G+++  T
Sbjct: 198 -ITKLTEEKQSAIQLNNRLQRELDQLRRESKKSQSGGIPFMYVLLVGLIGLILGYIMKRT 256

[Close]

BLAST of Sed0027273 vs. ExPASy Swiss-Prot
Match: B9DHD7 (Vesicle-associated protein 2-2 OS=Arabidopsis thaliana OX=3702 GN=PVA22 PE=1 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 5.8e-30
Identity = 63/124 (50.81%), Postives = 84/124 (67.74%), Query Frame = 0


Query: 9   LISVQPDELKFQIELDKQSFCDLKVANNTEHHVVFKVKTTSPKKYFVRPNTGVVQPWDSC 68
           L+ +QP  L+F ++L KQ+ C +++ N T H+V FKVKTTSPKKY VRPN GVV P  +C
Sbjct: 5   LLDIQPRTLQFAVDLKKQTSCVVQLTNTTHHYVAFKVKTTSPKKYCVRPNVGVVAPKSTC 64

Query: 69  IIRVTLQAMREYPADMHCKDKFLLQSTIVPPNTDVDELPADAFSKESGRTIEECKLKVIY 128
              V +QA +E P DM CKDKFL+QST V   T  +++ A  FSK  G+ IEE KL+V  
Sbjct: 65  EFTVIMQAFKEPPPDMVCKDKFLIQSTAVSAETTDEDITASMFSKAEGKHIEENKLRVTL 124

Query: 129 MSPN 133
           + P+
Sbjct: 125 VPPS 128

[Close]

BLAST of Sed0027273 vs. ExPASy TrEMBL
Match: A0A5A7TC60 (Vesicle-associated protein 2-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00770 PE=4 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 2.8e-104
Identity = 196/217 (90.32%), Postives = 204/217 (94.01%), Query Frame = 0


Query: 1   MSAGSGNRLISVQPDELKFQIELDKQSFCDLKVANNTEHHVVFKVKTTSPKKYFVRPNTG 60
           MSAG GNRLISVQPDELKFQIELDKQSFCDLKVANNTEHHV FKVKTTSPKKYFVRPNTG
Sbjct: 1   MSAGGGNRLISVQPDELKFQIELDKQSFCDLKVANNTEHHVAFKVKTTSPKKYFVRPNTG 60

Query: 61  VVQPWDSCIIRVTLQAMREYPADMHCKDKFLLQSTIVPPNTDVDELPADAFSKESGRTIE 120
           VVQPWDSCIIRVTLQAMREYPADM CKDKFLLQSTIVPPNTDVDELP+DAF+K+SGRTIE
Sbjct: 61  VVQPWDSCIIRVTLQAMREYPADMQCKDKFLLQSTIVPPNTDVDELPSDAFNKDSGRTIE 120

Query: 121 ECKLKVIYMSPNSDMGNPEDEKNSSQSSSLALQRLKEERDTVIKQTQQLQQELDMMKRRK 180
           ECKLKVIY+SP S +GN EDEKN SQSSS A+ RLKEERD  I+QT QLQQELDMMKRRK
Sbjct: 121 ECKLKVIYISPTSALGNSEDEKNLSQSSS-AVHRLKEERDMAIRQTHQLQQELDMMKRRK 180

Query: 181 HRKGDPGFSFMFAIFVGIVGIMAGFLLNLTLSSPSTE 218
           +RKGDPGFSF FAIFVGIVGIMAGFLLNLTLSSPSTE
Sbjct: 181 YRKGDPGFSFTFAIFVGIVGIMAGFLLNLTLSSPSTE 216

[Close]

BLAST of Sed0027273 vs. ExPASy TrEMBL
Match: A0A1S3BLE3 (vesicle-associated protein 2-1 OS=Cucumis melo OX=3656 GN=LOC103490849 PE=4 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 2.8e-104
Identity = 196/217 (90.32%), Postives = 204/217 (94.01%), Query Frame = 0


Query: 1   MSAGSGNRLISVQPDELKFQIELDKQSFCDLKVANNTEHHVVFKVKTTSPKKYFVRPNTG 60
           MSAG GNRLISVQPDELKFQIELDKQSFCDLKVANNTEHHV FKVKTTSPKKYFVRPNTG
Sbjct: 1   MSAGGGNRLISVQPDELKFQIELDKQSFCDLKVANNTEHHVAFKVKTTSPKKYFVRPNTG 60

Query: 61  VVQPWDSCIIRVTLQAMREYPADMHCKDKFLLQSTIVPPNTDVDELPADAFSKESGRTIE 120
           VVQPWDSCIIRVTLQAMREYPADM CKDKFLLQSTIVPPNTDVDELP+DAF+K+SGRTIE
Sbjct: 61  VVQPWDSCIIRVTLQAMREYPADMQCKDKFLLQSTIVPPNTDVDELPSDAFNKDSGRTIE 120

Query: 121 ECKLKVIYMSPNSDMGNPEDEKNSSQSSSLALQRLKEERDTVIKQTQQLQQELDMMKRRK 180
           ECKLKVIY+SP S +GN EDEKN SQSSS A+ RLKEERD  I+QT QLQQELDMMKRRK
Sbjct: 121 ECKLKVIYISPTSALGNSEDEKNLSQSSS-AVHRLKEERDMAIRQTHQLQQELDMMKRRK 180

Query: 181 HRKGDPGFSFMFAIFVGIVGIMAGFLLNLTLSSPSTE 218
           +RKGDPGFSF FAIFVGIVGIMAGFLLNLTLSSPSTE
Sbjct: 181 YRKGDPGFSFTFAIFVGIVGIMAGFLLNLTLSSPSTE 216

[Close]

BLAST of Sed0027273 vs. ExPASy TrEMBL
Match: A0A6J1KZI8 (vesicle-associated protein 2-1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498499 PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 3.7e-104
Identity = 193/217 (88.94%), Postives = 204/217 (94.01%), Query Frame = 0


Query: 1   MSAGSGNRLISVQPDELKFQIELDKQSFCDLKVANNTEHHVVFKVKTTSPKKYFVRPNTG 60
           MSAG GNRLISVQPDELKFQIEL+KQSFCDLKVANNTEHHV FKVKTTSPKKYFVRPNTG
Sbjct: 1   MSAGGGNRLISVQPDELKFQIELEKQSFCDLKVANNTEHHVAFKVKTTSPKKYFVRPNTG 60

Query: 61  VVQPWDSCIIRVTLQAMREYPADMHCKDKFLLQSTIVPPNTDVDELPADAFSKESGRTIE 120
           VVQPWDSCIIRVTLQA REYPADMHCKDKFLLQSTIVPPNTDVDELP+DAF+KESGRTIE
Sbjct: 61  VVQPWDSCIIRVTLQAQREYPADMHCKDKFLLQSTIVPPNTDVDELPSDAFNKESGRTIE 120

Query: 121 ECKLKVIYMSPNSDMGNPEDEKNSSQSSSLALQRLKEERDTVIKQTQQLQQELDMMKRRK 180
           ECKLKVIYM PNS MGNPEDEKN SQ+S+ A+QRLK+ERD  I+QT QLQQEL M+KRRK
Sbjct: 121 ECKLKVIYMFPNSAMGNPEDEKN-SQNSTQAVQRLKDERDIAIRQTHQLQQELGMLKRRK 180

Query: 181 HRKGDPGFSFMFAIFVGIVGIMAGFLLNLTLSSPSTE 218
           +RKGDPGFSF FAIFVGI+GIMAGFLLNLTLSSP TE
Sbjct: 181 YRKGDPGFSFTFAIFVGIIGIMAGFLLNLTLSSPGTE 216

[Close]

BLAST of Sed0027273 vs. ExPASy TrEMBL
Match: A0A6J1FL57 (vesicle-associated protein 2-1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444982 PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 3.7e-104
Identity = 193/217 (88.94%), Postives = 204/217 (94.01%), Query Frame = 0


Query: 1   MSAGSGNRLISVQPDELKFQIELDKQSFCDLKVANNTEHHVVFKVKTTSPKKYFVRPNTG 60
           MSAG GNRLISVQPDELKFQIEL+KQSFCDLKVANNTEHHV FKVKTTSPKKYFVRPNTG
Sbjct: 1   MSAGGGNRLISVQPDELKFQIELEKQSFCDLKVANNTEHHVAFKVKTTSPKKYFVRPNTG 60

Query: 61  VVQPWDSCIIRVTLQAMREYPADMHCKDKFLLQSTIVPPNTDVDELPADAFSKESGRTIE 120
           VVQPWDSCIIRVTLQA REYPADMHCKDKFLLQSTIVPPNTDVDELP+DAF+KESGRTIE
Sbjct: 61  VVQPWDSCIIRVTLQAQREYPADMHCKDKFLLQSTIVPPNTDVDELPSDAFNKESGRTIE 120

Query: 121 ECKLKVIYMSPNSDMGNPEDEKNSSQSSSLALQRLKEERDTVIKQTQQLQQELDMMKRRK 180
           ECKLKVIYM PNS MGNPEDEKN SQ+S+ A+QRLK+ERD  I+QT QLQQEL M+KRRK
Sbjct: 121 ECKLKVIYMFPNSAMGNPEDEKN-SQNSTQAVQRLKDERDMAIRQTHQLQQELGMLKRRK 180

Query: 181 HRKGDPGFSFMFAIFVGIVGIMAGFLLNLTLSSPSTE 218
           +RKGDPGFSF FAIFVGI+GIMAGFLLNLTLSSP TE
Sbjct: 181 YRKGDPGFSFTFAIFVGIIGIMAGFLLNLTLSSPGTE 216

[Close]

BLAST of Sed0027273 vs. ExPASy TrEMBL
Match: A0A6J1DN90 (vesicle-associated protein 2-1 OS=Momordica charantia OX=3673 GN=LOC111022662 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 6.3e-104
Identity = 195/217 (89.86%), Postives = 203/217 (93.55%), Query Frame = 0


Query: 1   MSAGSGNRLISVQPDELKFQIELDKQSFCDLKVANNTEHHVVFKVKTTSPKKYFVRPNTG 60
           MSAG GNRLISVQPDELKFQIELDKQSFCDLKVANNTEHHV FKVKTTSPKKYFVRPNTG
Sbjct: 1   MSAGGGNRLISVQPDELKFQIELDKQSFCDLKVANNTEHHVAFKVKTTSPKKYFVRPNTG 60

Query: 61  VVQPWDSCIIRVTLQAMREYPADMHCKDKFLLQSTIVPPNTDVDELPADAFSKESGRTIE 120
           VVQPWDSCIIRVTLQA REYP DMHCKDKFLLQSTIVPPNTDVDELPADAF+KESGR IE
Sbjct: 61  VVQPWDSCIIRVTLQAQREYPPDMHCKDKFLLQSTIVPPNTDVDELPADAFNKESGRAIE 120

Query: 121 ECKLKVIYMSPNSDMGNPEDEKNSSQSSSLALQRLKEERDTVIKQTQQLQQELDMMKRRK 180
           ECKLKVIY SP+S +GN EDE+NSSQSSS ALQRLKEERD  I+QT QLQQELDM+KRRK
Sbjct: 121 ECKLKVIYFSPSSALGNSEDERNSSQSSS-ALQRLKEERDMAIRQTHQLQQELDMLKRRK 180

Query: 181 HRKGDPGFSFMFAIFVGIVGIMAGFLLNLTLSSPSTE 218
           +RK DPGFSF FAIFVGIVGIMAGFLLNL+LSSPSTE
Sbjct: 181 YRKSDPGFSFTFAIFVGIVGIMAGFLLNLSLSSPSTE 216

[Close]

BLAST of Sed0027273 vs. TAIR 10
Match: AT5G47180.1 (Plant VAMP (vesicle-associated membrane protein) family protein )

HSP 1 Score: 277.3 bits (708), Expect = 1.0e-74
Identity = 140/221 (63.35%), Postives = 174/221 (78.73%), Query Frame = 0


Query: 1   MSAGSGNRLISVQPDELKFQIELDKQSFCDLKVANNTEHHVVFKVKTTSPKKYFVRPNTG 60
           M+    N+LIS+QPDELKF  EL+KQS+CDLKVAN TE++V FKVKTTSPKKYFVRPNTG
Sbjct: 1   MTGVGENQLISIQPDELKFLFELEKQSYCDLKVANKTENYVAFKVKTTSPKKYFVRPNTG 60

Query: 61  VVQPWDSCIIRVTLQAMREYPADMHCKDKFLLQSTIVPPNTDVDELPADAFSKESGRTIE 120
           V+QPWDSCIIRVTLQA REYP DM CKDKFLLQSTIVPP+TDVDELP D F+K+SG+T+ 
Sbjct: 61  VIQPWDSCIIRVTLQAQREYPPDMQCKDKFLLQSTIVPPHTDVDELPQDTFTKDSGKTLT 120

Query: 121 ECKLKVIYMSP-----NSDMGNPEDEKNSSQSSSLALQRLKEERDTVIKQTQQLQQELDM 180
           ECKLKV Y++P     +S+ G    +  SS++ S  +QRLKEERD  +KQTQQLQ EL+ 
Sbjct: 121 ECKLKVSYITPSTTQRSSESGATNGDGQSSETIS-TIQRLKEERDAAVKQTQQLQHELET 180

Query: 181 MKRRKH-RKGDPGFSFMFAIFVGIVGIMAGFLLNLTLSSPS 216
           ++RR++ R    G S   A  VG++G++ GF+L LTL+SP+
Sbjct: 181 VRRRRNQRNSGNGLSLKLAAMVGLIGLIIGFILKLTLASPT 220

[Close]

BLAST of Sed0027273 vs. TAIR 10
Match: AT5G47180.2 (Plant VAMP (vesicle-associated membrane protein) family protein )

HSP 1 Score: 277.3 bits (708), Expect = 1.0e-74
Identity = 140/221 (63.35%), Postives = 174/221 (78.73%), Query Frame = 0


Query: 1   MSAGSGNRLISVQPDELKFQIELDKQSFCDLKVANNTEHHVVFKVKTTSPKKYFVRPNTG 60
           M+    N+LIS+QPDELKF  EL+KQS+CDLKVAN TE++V FKVKTTSPKKYFVRPNTG
Sbjct: 1   MTGVGENQLISIQPDELKFLFELEKQSYCDLKVANKTENYVAFKVKTTSPKKYFVRPNTG 60

Query: 61  VVQPWDSCIIRVTLQAMREYPADMHCKDKFLLQSTIVPPNTDVDELPADAFSKESGRTIE 120
           V+QPWDSCIIRVTLQA REYP DM CKDKFLLQSTIVPP+TDVDELP D F+K+SG+T+ 
Sbjct: 61  VIQPWDSCIIRVTLQAQREYPPDMQCKDKFLLQSTIVPPHTDVDELPQDTFTKDSGKTLT 120

Query: 121 ECKLKVIYMSP-----NSDMGNPEDEKNSSQSSSLALQRLKEERDTVIKQTQQLQQELDM 180
           ECKLKV Y++P     +S+ G    +  SS++ S  +QRLKEERD  +KQTQQLQ EL+ 
Sbjct: 121 ECKLKVSYITPSTTQRSSESGATNGDGQSSETIS-TIQRLKEERDAAVKQTQQLQHELET 180

Query: 181 MKRRKH-RKGDPGFSFMFAIFVGIVGIMAGFLLNLTLSSPS 216
           ++RR++ R    G S   A  VG++G++ GF+L LTL+SP+
Sbjct: 181 VRRRRNQRNSGNGLSLKLAAMVGLIGLIIGFILKLTLASPT 220

[Close]

BLAST of Sed0027273 vs. TAIR 10
Match: AT2G45140.1 (plant VAP homolog 12 )

HSP 1 Score: 168.7 bits (426), Expect = 5.2e-42
Identity = 91/238 (38.24%), Postives = 138/238 (57.98%), Query Frame = 0


Query: 7   NRLISVQPDELKFQIELDKQSFCDLKVANNTEHHVVFKVKTTSPKKYFVRPNTGVVQPWD 66
           N L+++ P +L+F  EL KQ  C L + N T+++V FKVKTT+PKKY VRPNTGVV P  
Sbjct: 3   NELLTIDPVDLQFPFELKKQISCSLYLGNKTDNYVAFKVKTTNPKKYCVRPNTGVVHPRS 62

Query: 67  SCIIRVTLQAMREYPADMHCKDKFLLQSTIVPPNTDVDELPADAFSKESGRTIEECKLKV 126
           S  + VT+QA +E PAD+ CKDKFLLQ  +  P     ++  + FSKE+G  +EE KL+V
Sbjct: 63  SSEVLVTMQAQKEAPADLQCKDKFLLQCVVASPGATPKDVTHEMFSKEAGHRVEETKLRV 122

Query: 127 IYMSPN--------------------SDMGNPED--------------EKNSSQSSSLAL 186
           +Y++P                     SD GN  D              + NSS++ +L +
Sbjct: 123 VYVAPPRPPSPVREGSEEGSSPRASVSDNGNASDFTAAPRFSADRVDAQDNSSEARAL-V 182

Query: 187 QRLKEERDTVIKQTQQLQQELDMMKRRKHRKGDPGFSFMFAIFVGIVGIMAGFLLNLT 211
            +L EE+++ ++   +LQQELD ++R   R    G  FM+ + VG++G++ G+++  T
Sbjct: 183 TKLTEEKNSAVQLNNRLQQELDQLRRESKRSKSGGIPFMYVLLVGLIGLILGYIMKRT 239

[Close]

BLAST of Sed0027273 vs. TAIR 10
Match: AT4G00170.1 (Plant VAMP (vesicle-associated membrane protein) family protein )

HSP 1 Score: 166.4 bits (420), Expect = 2.6e-41
Identity = 96/232 (41.38%), Postives = 139/232 (59.91%), Query Frame = 0


Query: 9   LISVQPDELKFQIELDKQSFCDLKVANNTEHH-VVFKVKTTSPKKYFVRPNTGVVQPWDS 68
           L+++ P ELKF  EL KQS C +++ N T    V FKVKTT+P+KY VRPNTGVV P DS
Sbjct: 6   LVNIHPTELKFPFELKKQSSCSMQLTNKTTTQCVAFKVKTTNPRKYCVRPNTGVVLPGDS 65

Query: 69  CIIRVTLQAMREYPADMHCKDKFLLQSTIVPPNTDVDELPADAFSKESGRTIEECKLKVI 128
           C + VT+QA +E P DM CKDKFL+Q+ +V   T   E+ A+ F+KE+GR IE+ KL+V+
Sbjct: 66  CNVTVTMQAQKEAPLDMQCKDKFLVQTVVVSDGTTSKEVLAEMFNKEAGRVIEDFKLRVV 125

Query: 129 YMSPNSDMGNPE--DEKNS---------SQSSSL--------------------ALQRLK 188
           Y+  N     PE  +E NS         SQS+SL                     + +L 
Sbjct: 126 YIPANPPSPVPEGSEEGNSPMASLNDIASQSASLFDDVSRTFEETSEKSSEAWSMISKLT 185

Query: 189 EERDTVIKQTQQLQQELDMMKRRKHRKGDPGFSFMFAIFVGIVGIMAGFLLN 209
           EE+ +  +Q+Q+L+ EL+M+++   +K   G S +  + VG++G + G+LLN
Sbjct: 186 EEKTSATQQSQKLRLELEMLRKETSKKQSGGHSLLLMLLVGLLGCVIGYLLN 237

[Close]

BLAST of Sed0027273 vs. TAIR 10
Match: AT3G60600.1 (vesicle associated protein )

HSP 1 Score: 165.6 bits (418), Expect = 4.4e-41
Identity = 90/240 (37.50%), Postives = 140/240 (58.33%), Query Frame = 0


Query: 5   SGNRLISVQPDELKFQIELDKQSFCDLKVANNTEHHVVFKVKTTSPKKYFVRPNTGVVQP 64
           S + L++V+P +L+F  EL KQ  C L + N T+++V FKVKTT+PKKY VRPNTGVV P
Sbjct: 18  SNSELLTVEPLDLQFPFELKKQISCSLYLTNKTDNNVAFKVKTTNPKKYCVRPNTGVVLP 77

Query: 65  WDSCIIRVTLQAMREYPADMHCKDKFLLQSTIVPPNTDVDELPADAFSKESGRTIEECKL 124
             +C + VT+QA +E P+DM CKDKFLLQ  I  P     E+  + FSKE+G  +EE KL
Sbjct: 78  RSTCEVLVTMQAQKEAPSDMQCKDKFLLQGVIASPGVTAKEVTPEMFSKEAGHRVEETKL 137

Query: 125 KVIYMSPN--------------------SDMGNPED--------------EKNSSQSSSL 184
           +V Y++P                     SD G+  +              ++N+S++ +L
Sbjct: 138 RVTYVAPPRPPSPVHEGSEEGSSPRASVSDNGHGSEFSFERFIVDNKAGHQENTSEARAL 197

Query: 185 ALQRLKEERDTVIKQTQQLQQELDMMKRRKHRKGDPGFSFMFAIFVGIVGIMAGFLLNLT 211
            + +L EE+ + I+   +LQ+ELD ++R   +    G  FM+ + VG++G++ G+++  T
Sbjct: 198 -ITKLTEEKQSAIQLNNRLQRELDQLRRESKKSQSGGIPFMYVLLVGLIGLILGYIMKRT 256

The following BLAST results are available for this feature:

BLAST of Sed0027273 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008448784.1	5.8e-104	90.32	PREDICTED: vesicle-associated protein 2-1 [Cucumis melo] >KAA0041052.1 vesicle-a...	[more]
XP_022938915.1	7.6e-104	88.94	vesicle-associated protein 2-1-like isoform X1 [Cucurbita moschata] >XP_02354097...	[more]
XP_023005539.1	7.6e-104	88.94	vesicle-associated protein 2-1-like isoform X1 [Cucurbita maxima]	[more]
XP_022155548.1	1.3e-103	89.86	vesicle-associated protein 2-1 [Momordica charantia]	[more]
XP_038905973.1	1.7e-103	89.86	vesicle-associated protein 2-1 [Benincasa hispida]	[more]

BLAST of Sed0027273 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LVU1	1.4e-73	63.35	Vesicle-associated protein 2-1 OS=Arabidopsis thaliana OX=3702 GN=PVA21 PE=1 SV=...	[more]
Q9SHC8	7.3e-41	38.24	Vesicle-associated protein 1-2 OS=Arabidopsis thaliana OX=3702 GN=PVA12 PE=1 SV=...	[more]
Q84WW5	3.6e-40	41.38	Vesicle-associated protein 1-3 OS=Arabidopsis thaliana OX=3702 GN=PVA13 PE=2 SV=...	[more]
Q8VZ95	6.1e-40	37.50	Vesicle-associated protein 1-1 OS=Arabidopsis thaliana OX=3702 GN=PVA11 PE=1 SV=...	[more]
B9DHD7	5.8e-30	50.81	Vesicle-associated protein 2-2 OS=Arabidopsis thaliana OX=3702 GN=PVA22 PE=1 SV=...	[more]

BLAST of Sed0027273 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TC60	2.8e-104	90.32	Vesicle-associated protein 2-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3BLE3	2.8e-104	90.32	vesicle-associated protein 2-1 OS=Cucumis melo OX=3656 GN=LOC103490849 PE=4 SV=1	[more]
A0A6J1KZI8	3.7e-104	88.94	vesicle-associated protein 2-1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1FL57	3.7e-104	88.94	vesicle-associated protein 2-1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1DN90	6.3e-104	89.86	vesicle-associated protein 2-1 OS=Momordica charantia OX=3673 GN=LOC111022662 PE...	[more]

BLAST of Sed0027273 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G47180.1	1.0e-74	63.35	Plant VAMP (vesicle-associated membrane protein) family protein	[more]
AT5G47180.2	1.0e-74	63.35	Plant VAMP (vesicle-associated membrane protein) family protein	[more]
AT2G45140.1	5.2e-42	38.24	plant VAP homolog 12	[more]
AT4G00170.1	2.6e-41	41.38	Plant VAMP (vesicle-associated membrane protein) family protein	[more]
AT3G60600.1	4.4e-41	37.50	vesicle associated protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 152..179
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..151
None	No IPR available	PANTHER	PTHR10809:SF42	VESICLE-ASSOCIATED PROTEIN 2-1	coord: 5..214
IPR016763	Vesicle-associated membrane-protein-associated protein	PIRSF	PIRSF019693	VAMP_assoc_prot	coord: 2..158 e-value: 6.2E-51 score: 172.0 coord: 135..209 e-value: 1.6E-4 score: 19.8
IPR016763	Vesicle-associated membrane-protein-associated protein	PANTHER	PTHR10809	VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN	coord: 5..214
IPR013783	Immunoglobulin-like fold	GENE3D	2.60.40.10	Immunoglobulins	coord: 3..133 e-value: 3.4E-41 score: 142.1
IPR000535	Major sperm protein (MSP) domain	PFAM	PF00635	Motile_Sperm	coord: 10..114 e-value: 1.3E-28 score: 99.0
IPR000535	Major sperm protein (MSP) domain	PROSITE	PS50202	MSP	coord: 9..129 score: 29.443703
IPR008962	PapD-like superfamily	SUPERFAMILY	49354	PapD-like	coord: 5..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0027273.1	Sed0027273.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090158	endoplasmic reticulum membrane organization
biological_process	GO:0061817	endoplasmic reticulum-plasma membrane tethering
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane