Sed0027239 (gene) Chayote v1

Overview


Name	Sed0027239
Type	gene
Organism	Sechium edule (Chayote v1)
Description	chloride conductance regulatory protein ICln
Location	LG05: 4193129 .. 4197319 (+)
RNA-Seq Expression	Sed0027239
Synteny	Sed0027239

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACAGCATCTGGGCTTAGCCGCTCTATTGGAGTGCGAGCAAGAGAGAGAGAGAAAGAGGAATTAGGGTTTTAGAGTTCATCAGAGGATTTAGGGTTTTAGAGATTATCAGAGGAATTAGGGTTTTAGAGCGAATGGCTATGGGGTTAAGGGTCTACACGGAGAGAACGGAGGATGGGTTGGGATTACCAGTTTTCGACGTGAGCCAAGGCGAGGTTCTCATGCACGCGCTGCCGTCCGTCGCAATCGTGTTCGATAACCGACCGCCGGAGTTTCCCGGCACTCTCTACGTCTCCTCCAGGTATCTTCTTCACCTTCGCTTTTGTTCTGTTTTAGAGTTGCATCCATTAATTAATGCTAACATTTGAGGATTAGGTCCCCAAATCCTCAAATGTTTTGTTTGATTAGACTGAAGTGAAGAATCTAATGAGTTTTGGGATGGAATGGTTGATTGTGAGAATTTGGTTGCTGATGCGAGTATGAGTAAGAAAATGCCAGCGGGTTTTTTGGTTTTGAGGATCGGAAGAAATCATTTGAAGATACTAGACAAAGGAAATCAACGAAATCCTGGAAAAGAAAACATTTTCAGTGTTAAGATGAAAGTGTTACAAGATTTTAGGCTAGGTTCTGAGCAATTTTTACAATAACATAACGCGATAATACAATCACAAACTTTTAGAAAGTTGAACATCCAACTCTGAGTCAGTAGTGCAATGATTTCATTGTTTGGTTGTAAAAGAGTTCAACGCCAGCGCGTCACAGGTTCGATCCCGAGAATCGGTATTTGTCCCCCCCTCTCCCGATATGTACTAAAAAAACATCCAACTTAGAATCCAAAAAGAAAAGCCTTGCATATCCGAAGGATTATCTCATTATCCTCTAACATGTGAGAGGAAGAACTTGCATGTGGAGGAACCAATGGATAACACATCCCCGTTTGGCGCTAGGTGGTGGAGAGTGCGAAGAAGACCCACGACTCATCAGGACTCCGTTGAGCAAGTGACAGAGAATGAAGTTGATAATGAGATACTCTTTCAAATTTGTTAGCATTTTCTTCTTGGATTCTAATTTGGATGTTCAACTTCCTAAAAGTTTGTTGTTGTATTACCGTGTTATCTTATTGTAGAAATAACTCAGAACCTGACCCAAAATATTTGAAAACTTTCATCCTATCTGTAAGAATGTTTTAATTTCCTATAAAAAAATCGGGAGTTCGTTCAGCATGAGACAAGGAATGAAGTTGAAAGAAGACAACTTAAAAGATTTGATAATCCTTTGGTGTTTGTTGTCTTCGATGCTTCCAATTAGGAAATTAGGATAGAAATAGTCACTCCAAAATTTGGCTAAAGGGGAACAAGAAATTTGGGAGTTTGTCCACACTCATTACGAAGTGTTTTCTTACTTCGAATTTTCTGAAGCTCATTCGTAGTTTATGAACTTATGATATACTTAAGTAAGTTAAAGCCAATTAAATGAACATATTGTAACCTCATTAGATTTTTGGCTGATTCCTATTCACAGTCTTTTGGAATCTTTGTTTTTTGTACTGCATCTCTTTCATATTAAAAAAGGATATCAAGAAGAAGCTTCATTGTTGGCAAGCTTAAGCCAAACACTATTAATTCTTGGGTAGTGTTTAGGTTCTTTTGTTGCCATTTTTGAGGTATTTAGCTTGGGGGAACCATATGATTTTAGAGGGGTGGAAGGATCTTGGGAAGTTTTTAGGTTCAATGCAACTTATGGGTTTAATTATTTTGAATTGGAGTCTTTTCTTGTGGCTAGTTTTGAGATTCCTTTTGTTGGCTTGTTTTTATATCCGACACGCTTTTCATTTTTCGCCATCAAATTTTTGTTTTTTAACCCTACACACATCCATACAAAAGTGTGGATGTGTATCGTCTTAATTGACTACTATCTAATTGAACTTGACATGCTGAGAAAATCGAACATATCGTAGGCAAGTGATTTGGTTGAGTGACGTAGACAAGGCAAAAGGTTATGCCGTTGATTTTCTGTCAATGTCATTGCATGCAGTTTCAACAGACCCAGAGGCCTATCCATCTCCTTGTCTGTATGTACAGGTATTTACCAGAGCAACCTCGCATTGTTCCTGAATCCTCATCAATTTTATCAAGTCATCTTATGCAAAACCTACCAAAATAATATGGCGGTGTTGTTAATTGGAAGAATAAGATTTTCTTGTGTAGTTTTATATTTGCAGAAATCAACTTGCCATCATGTTAAATATTTCAACAATACTAATATATAAACGAAAAAAACTTAAACATCACGTTTCCTAAACATGTCCACACACTACTTTTTCCAGAAATCAACTTGTCATCGTGTTCATGTTGTGTTATATCCGTGTCATTTAGGATGCAAGTTTCCTACTGTAATTGACCGATGCTCGAATTTTGCTTGCATACATTACATCATTGAGAATAATTCAAAGGAAACATCTATTTAAGAATAGTTATTAGGCATGTAGCCTTGTAATTAAGGCTTGCAGAAAATTCTTGCTCACATATCTGCTTTTAAACACTATTTTCTCCCTTTATTTTTTGAAGGCATTTGCCAAAATCTTTTATTTTTTCCTGACATTTCCATTGCTGACTGTGTTGAAGATTGATACTGGAGATGATGAAGAGTGTGATAATTCAGATTCAGAATGTGAGGGTGAAGAGTCTGAGAATTTAGACTTGGCTGCAGTCAGAGAAATGCGACTTGTACCTTCAAATCGTGAGGAATGTATGGTTTTCTCCTCTTTTTTGTTTGATTGTGAAATGTTATTACTTATTGCCATGGATTAATATAAATACCTTGGTTTCTACTGCAATAGTAGAAACTTTGTTTGATATATGCTGCCAATGCGCCGAACTTAATCCCGAACCTACTGAAGGTTAGTTCACTTCCATAATGGACTTTGGTATCAATTTTCCATAAAACTATTTTTTGTTGGAATAATGAGAACTACATGCTTCCTTTAGATCAAGAAGAAGGGCAAAACTGGTTTTTTTCTGCTGATCAGTTGGAAGAGATGCCAGGTATGGAGTCAAGTAGATAGATAATCCATATTCTTTTCCAAAACTACTTATTAGATATCTTATGAAATTGATCTTATGTAATCTTTAGGACTTTCCGGAGTTGTAGTTGATGAAGAACAATTCTCCGCTAATCCAGCAAACTCAATCGGCCACTCGAACGGAGATCATGACCATCTAGCTCGCACAGTGCTTCAGGTATGTTCGTGAACGCATAATTCTGTCTCTTAAAGCATTTCAGTATTTGCTGGTAGGAGGGTTCATACATTTCCCAAAACCGATTCGATCGAGGTCGGTGGGTTTTCAAATCTATGTCGGTCAGGTCATTTAGAAAAATAATTAACAAAAAAAATTTCGGTTAACCGATAATTTCCTTTATATAATATTAATATTTTCATATAATTAATTAGATTTCTTATTAAATTATTTCAAAATTAACTTAAATTTAAATGTGTTTCAAAAAATTGTTGGGTATGTTCATTTCTTAATTTAACTGACTTAACCGACCGAACGGACCGACTTAATCAACCGATTGGTTTCGGTATCACTTTTAAGAAAATAGGTCGATTCGATGTCAATTTTTCACCGAAAACCGACATCGACTGACCGATGAACACACCCCTATTTGCTGGTGTCTTTGAAAGTGACTCATATTTGATGCCCTAAATCTACTTCGGTGTGAAAGTAGCTGATAAGTGCAATAGCTTAACCAAAAAGGTCATGGTTTGAATCCTCCAACAATTTTAAATGGTCGTTTTAACTTAAACAAAAAAGAAAAACGATGTGAAAGGTGGTTTCTTTTGTTGTTCAGCCTTTTTTTTTTCTATTTTCTTACTGCTTTTTGCTGCATAATGTTTAGCTTCAAATCAATGATCAACGTTTTGAGGATGCAGAAGAGATGGAGCCTGAAAACAACGGTAACCATCATTGAGCTTTTTGTTGTGTCTTGAAAAGAAGAAACTAAATTATGTGTTAGAATTTTCTATTTTACACTTATAAACCTCTGTTGTATATGCTATTTTATTGTGTTTAACATCAGACAAATTAAGCTTTTAGAGACCTAATTTTCCTTGTAGTTTTTACGTAGTCGCTTAATGACCAAACTTATGGTTAGCGTTTGCATTTTTAATCTTAATCCTGGAGTGAGTTTGG

mRNA sequence

AACAGCATCTGGGCTTAGCCGCTCTATTGGAGTGCGAGCAAGAGAGAGAGAGAAAGAGGAATTAGGGTTTTAGAGTTCATCAGAGGATTTAGGGTTTTAGAGATTATCAGAGGAATTAGGGTTTTAGAGCGAATGGCTATGGGGTTAAGGGTCTACACGGAGAGAACGGAGGATGGGTTGGGATTACCAGTTTTCGACGTGAGCCAAGGCGAGGTTCTCATGCACGCGCTGCCGTCCGTCGCAATCGTGTTCGATAACCGACCGCCGGAGTTTCCCGGCACTCTCTACGTCTCCTCCAGGCAAGTGATTTGGTTGAGTGACGTAGACAAGGCAAAAGGTTATGCCGTTGATTTTCTGTCAATGTCATTGCATGCAGTTTCAACAGACCCAGAGGCCTATCCATCTCCTTGTCTGTATGTACAGATTGATACTGGAGATGATGAAGAGTGTGATAATTCAGATTCAGAATGTGAGGGTGAAGAGTCTGAGAATTTAGACTTGGCTGCAGTCAGAGAAATGCGACTTGTACCTTCAAATCGTGAGGAATTAGAAACTTTGTTTGATATATGCTGCCAATGCGCCGAACTTAATCCCGAACCTACTGAAGATCAAGAAGAAGGGCAAAACTGGTTTTTTTCTGCTGATCAGTTGGAAGAGATGCCAGGACTTTCCGGAGTTGTAGTTGATGAAGAACAATTCTCCGCTAATCCAGCAAACTCAATCGGCCACTCGAACGGAGATCATGACCATCTAGCTCGCACAGTGCTTCAGCTTCAAATCAATGATCAACGTTTTGAGGATGCAGAAGAGATGGAGCCTGAAAACAACGGTAACCATCATTGAGCTTTTTGTTGTGTCTTGAAAAGAAGAAACTAAATTATGTGTTAGAATTTTCTATTTTACACTTATAAACCTCTGTTGTATATGCTATTTTATTGTGTTTAACATCAGACAAATTAAGCTTTTAGAGACCTAATTTTCCTTGTAGTTTTTACGTAGTCGCTTAATGACCAAACTTATGGTTAGCGTTTGCATTTTTAATCTTAATCCTGGAGTGAGTTTGG

Coding sequence (CDS)

ATGGCTATGGGGTTAAGGGTCTACACGGAGAGAACGGAGGATGGGTTGGGATTACCAGTTTTCGACGTGAGCCAAGGCGAGGTTCTCATGCACGCGCTGCCGTCCGTCGCAATCGTGTTCGATAACCGACCGCCGGAGTTTCCCGGCACTCTCTACGTCTCCTCCAGGCAAGTGATTTGGTTGAGTGACGTAGACAAGGCAAAAGGTTATGCCGTTGATTTTCTGTCAATGTCATTGCATGCAGTTTCAACAGACCCAGAGGCCTATCCATCTCCTTGTCTGTATGTACAGATTGATACTGGAGATGATGAAGAGTGTGATAATTCAGATTCAGAATGTGAGGGTGAAGAGTCTGAGAATTTAGACTTGGCTGCAGTCAGAGAAATGCGACTTGTACCTTCAAATCGTGAGGAATTAGAAACTTTGTTTGATATATGCTGCCAATGCGCCGAACTTAATCCCGAACCTACTGAAGATCAAGAAGAAGGGCAAAACTGGTTTTTTTCTGCTGATCAGTTGGAAGAGATGCCAGGACTTTCCGGAGTTGTAGTTGATGAAGAACAATTCTCCGCTAATCCAGCAAACTCAATCGGCCACTCGAACGGAGATCATGACCATCTAGCTCGCACAGTGCTTCAGCTTCAAATCAATGATCAACGTTTTGAGGATGCAGAAGAGATGGAGCCTGAAAACAACGGTAACCATCATTGA

Protein sequence

MAMGLRVYTERTEDGLGLPVFDVSQGEVLMHALPSVAIVFDNRPPEFPGTLYVSSRQVIWLSDVDKAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDDEECDNSDSECEGEESENLDLAAVREMRLVPSNREELETLFDICCQCAELNPEPTEDQEEGQNWFFSADQLEEMPGLSGVVVDEEQFSANPANSIGHSNGDHDHLARTVLQLQINDQRFEDAEEMEPENNGNHH

Homology

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BLAST of Sed0027239 vs. NCBI nr
Match: XP_022958470.1 (chloride conductance regulatory protein ICln [Cucurbita moschata])

HSP 1 Score: 410.2 bits (1053), Expect = 1.2e-110
Identity = 200/237 (84.39%), Postives = 215/237 (90.72%), Query Frame = 0


Query: 1   MAMGLRVYTERTEDGLGLPVFDVSQGEVLMHALPSVAIVFDNRPPEFPGTLYVSSRQVIW 60
           M +GLR +TERT DGLGLPVFD SQGEVLMH +P+VAIVFDNRPPEFPGTLYVSS QV+W
Sbjct: 1   MGIGLRAFTERTGDGLGLPVFDASQGEVLMHTVPAVAIVFDNRPPEFPGTLYVSSSQVVW 60

Query: 61  LSDVDKAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDDEECDNSDSECEGEESEN 120
           LSDVD AKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQ+DTGD+EE DNSDSEC GEESEN
Sbjct: 61  LSDVDMAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQVDTGDEEESDNSDSECLGEESEN 120

Query: 121 LDLAAVREMRLVPSNREELETLFDICCQCAELNPEPTEDQEEGQ-NWFFSADQLEEMPGL 180
           LDL AVREMRLVPSN  ELE LFD+CCQCAELNP+PT D+EE + NWFFSADQLEEMPGL
Sbjct: 121 LDLGAVREMRLVPSNPAELEALFDVCCQCAELNPDPTGDEEEEEHNWFFSADQLEEMPGL 180

Query: 181 SGVVVDEEQFSANPANSIGHSNGDHDHLARTVLQLQINDQRFEDAEEMEPENNGNHH 237
           SG   D+E FS+NPANSIGHSNGDHD L+RTVLQLQINDQRFEDAEEMEPE+NG HH
Sbjct: 181 SGDGDDKEPFSSNPANSIGHSNGDHDQLSRTVLQLQINDQRFEDAEEMEPESNGKHH 237

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BLAST of Sed0027239 vs. NCBI nr
Match: XP_023533954.1 (chloride conductance regulatory protein ICln [Cucurbita pepo subsp. pepo])

HSP 1 Score: 408.3 bits (1048), Expect = 4.5e-110
Identity = 200/237 (84.39%), Postives = 215/237 (90.72%), Query Frame = 0


Query: 1   MAMGLRVYTERTEDGLGLPVFDVSQGEVLMHALPSVAIVFDNRPPEFPGTLYVSSRQVIW 60
           M +GLR YTERT +GLGLPVFD SQGEVL+H +P+VAIVFDNRPPEFPGTLYVSS QV+W
Sbjct: 1   MGIGLRPYTERTGEGLGLPVFDASQGEVLIHTVPAVAIVFDNRPPEFPGTLYVSSSQVVW 60

Query: 61  LSDVDKAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDDEECDNSDSECEGEESEN 120
           LSDVD AKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGD+EE DNSDSEC GEESEN
Sbjct: 61  LSDVDMAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDEEESDNSDSECLGEESEN 120

Query: 121 LDLAAVREMRLVPSNREELETLFDICCQCAELNPEPTEDQEEGQ-NWFFSADQLEEMPGL 180
           LDL AVREMRLVPSN  ELE LFD+CCQCAELNP+PT D+EE + NWFFSADQLEEMPGL
Sbjct: 121 LDLGAVREMRLVPSNPAELEALFDVCCQCAELNPDPTGDEEEEEHNWFFSADQLEEMPGL 180

Query: 181 SGVVVDEEQFSANPANSIGHSNGDHDHLARTVLQLQINDQRFEDAEEMEPENNGNHH 237
           SG   D+E FS+NPANSIGHSNGDHD L+RTVLQLQINDQRFEDAEEMEPE+NG HH
Sbjct: 181 SGDGDDKEPFSSNPANSIGHSNGDHDQLSRTVLQLQINDQRFEDAEEMEPESNGKHH 237

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BLAST of Sed0027239 vs. NCBI nr
Match: KAG7035583.1 (Chloride conductance regulatory protein ICln [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 408.3 bits (1048), Expect = 4.5e-110
Identity = 200/237 (84.39%), Postives = 214/237 (90.30%), Query Frame = 0


Query: 1   MAMGLRVYTERTEDGLGLPVFDVSQGEVLMHALPSVAIVFDNRPPEFPGTLYVSSRQVIW 60
           M +GLR +TERT DGLGLPVFD SQGEVLMH +P+VAIVFDNRPPEFPGTLYVSS QV+W
Sbjct: 1   MGIGLRAFTERTGDGLGLPVFDASQGEVLMHTVPAVAIVFDNRPPEFPGTLYVSSSQVVW 60

Query: 61  LSDVDKAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDDEECDNSDSECEGEESEN 120
           LSDVD AKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGD+EE DNSDSEC GEESEN
Sbjct: 61  LSDVDMAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDEEESDNSDSECLGEESEN 120

Query: 121 LDLAAVREMRLVPSNREELETLFDICCQCAELNPEPTEDQEEGQ-NWFFSADQLEEMPGL 180
           LDL AVREMRLVPSN  ELE LFD+CCQCAELNP+PT D+EE + NWFFSADQLEEMPGL
Sbjct: 121 LDLGAVREMRLVPSNPAELEALFDVCCQCAELNPDPTGDEEEEEHNWFFSADQLEEMPGL 180

Query: 181 SGVVVDEEQFSANPANSIGHSNGDHDHLARTVLQLQINDQRFEDAEEMEPENNGNHH 237
           SG   D+E FS+NPANSIGHSNGDHD L+RTVLQLQI DQRFEDAEEMEPE+NG HH
Sbjct: 181 SGDGDDKEPFSSNPANSIGHSNGDHDQLSRTVLQLQITDQRFEDAEEMEPESNGKHH 237

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BLAST of Sed0027239 vs. NCBI nr
Match: XP_022995276.1 (chloride conductance regulatory protein ICln [Cucurbita maxima])

HSP 1 Score: 408.3 bits (1048), Expect = 4.5e-110
Identity = 200/237 (84.39%), Postives = 216/237 (91.14%), Query Frame = 0


Query: 1   MAMGLRVYTERTEDGLGLPVFDVSQGEVLMHALPSVAIVFDNRPPEFPGTLYVSSRQVIW 60
           M +GLR++TERT DGLGLPVFD SQGEVLMH +P+VAIVFDNRPPEFPGTLYVSS QV+W
Sbjct: 1   MGIGLRLFTERTGDGLGLPVFDASQGEVLMHTVPAVAIVFDNRPPEFPGTLYVSSSQVVW 60

Query: 61  LSDVDKAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDDEECDNSDSECEGEESEN 120
           LSDVD AKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGD+EE DNSDSEC GEESEN
Sbjct: 61  LSDVDMAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDEEESDNSDSECLGEESEN 120

Query: 121 LDLAAVREMRLVPSNREELETLFDICCQCAELNPEPTEDQEEGQ-NWFFSADQLEEMPGL 180
           LDL AVREMRLVPSN  ELE LFD+CCQCAELNP+PT D+EE + NWFFSADQLEEMPGL
Sbjct: 121 LDLGAVREMRLVPSNPAELEALFDVCCQCAELNPDPTGDEEEEEHNWFFSADQLEEMPGL 180

Query: 181 SGVVVDEEQFSANPANSIGHSNGDHDHLARTVLQLQINDQRFEDAEEMEPENNGNHH 237
           S    D+EQFS++PANSIGHSNGDHD L+RTVLQLQINDQRFEDAEEMEPE+NG HH
Sbjct: 181 SRDGDDKEQFSSDPANSIGHSNGDHDQLSRTVLQLQINDQRFEDAEEMEPESNGKHH 237

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BLAST of Sed0027239 vs. NCBI nr
Match: KAG6605674.1 (Chloride conductance regulatory protein ICln, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 405.2 bits (1040), Expect = 3.8e-109
Identity = 199/237 (83.97%), Postives = 213/237 (89.87%), Query Frame = 0


Query: 1   MAMGLRVYTERTEDGLGLPVFDVSQGEVLMHALPSVAIVFDNRPPEFPGTLYVSSRQVIW 60
           M +GLR +TERT DGLGL VFD SQGEVLMH +P+VAIVFDNRPPEFPGTLYVSS QV+W
Sbjct: 1   MGIGLRAFTERTGDGLGLSVFDASQGEVLMHTVPAVAIVFDNRPPEFPGTLYVSSSQVVW 60

Query: 61  LSDVDKAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDDEECDNSDSECEGEESEN 120
           LSDVD AKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGD+EE DNSDSEC GEESEN
Sbjct: 61  LSDVDMAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDEEESDNSDSECLGEESEN 120

Query: 121 LDLAAVREMRLVPSNREELETLFDICCQCAELNPEPTEDQEEGQ-NWFFSADQLEEMPGL 180
           LDL AVREMRLVPSN  ELE LFD+CCQCAELNP+PT D+EE + NWFFSADQLEEMPGL
Sbjct: 121 LDLGAVREMRLVPSNPAELEALFDVCCQCAELNPDPTGDEEEEEHNWFFSADQLEEMPGL 180

Query: 181 SGVVVDEEQFSANPANSIGHSNGDHDHLARTVLQLQINDQRFEDAEEMEPENNGNHH 237
           SG   D+E FS+NPANSIGHSNGDHD L+RTVLQLQI DQRFEDAEEMEPE+NG HH
Sbjct: 181 SGDGDDKEPFSSNPANSIGHSNGDHDQLSRTVLQLQITDQRFEDAEEMEPESNGKHH 237

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BLAST of Sed0027239 vs. ExPASy Swiss-Prot
Match: Q9LVA7 (Chloride conductance regulatory protein ICln OS=Arabidopsis thaliana OX=3702 GN=At5g62290 PE=2 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 4.0e-69
Identity = 140/238 (58.82%), Postives = 170/238 (71.43%), Query Frame = 0


Query: 1   MAMGLRVYTERTEDGLGLPVFDVSQGEVLMHALPSVAIVFDNRPPEFPGTLYVSSRQVIW 60
           M  GLR +T RTEDG G PV D S GE LMH   SVA+   NRP E PGTLY++SR++IW
Sbjct: 1   MVAGLRDFTLRTEDGSGKPVLDESNGEELMHVQTSVAVALGNRPIESPGTLYITSRKLIW 60

Query: 61  LSDVDKAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDDEECDNSDSECEGEESEN 120
           LSDVD AKGYAVDFLS+SLHAVS DPEAY SPC+Y QI+  +DE     D E + E +E 
Sbjct: 61  LSDVDMAKGYAVDFLSISLHAVSRDPEAYSSPCIYTQIEVEEDE-----DDESDSESTEV 120

Query: 121 LDLAAVREMRLVPSNREELETLFDICCQCAELNPEPTEDQEE--GQNWFFSADQLEEMPG 180
           LDL+ +REMRLVPS+  +LETLFD+ C+CAELNPEP +++EE  G NW FSADQ++   G
Sbjct: 121 LDLSKIREMRLVPSDSTQLETLFDVFCECAELNPEPVQEEEEESGHNWVFSADQMDVRGG 180

Query: 181 LSGVVVDEEQFSANPANSIGHSNGDHDHLARTVLQLQINDQRFEDAEEMEPENNGNHH 237
                  E Q S +P + IGHSNGD + L + +L+LQINDQRFEDAEEM  E+    H
Sbjct: 181 DDDA---EWQISQSPTSVIGHSNGD-EGLNQPMLELQINDQRFEDAEEMVHESETKDH 229

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BLAST of Sed0027239 vs. ExPASy Swiss-Prot
Match: Q61189 (Methylosome subunit pICln OS=Mus musculus OX=10090 GN=Clns1a PE=1 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.2e-14
Identity = 39/114 (34.21%), Postives = 68/114 (59.65%), Query Frame = 0


Query: 49  GTLYVSSRQVIWLSDVDKAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDDEECDN 108
           GTLY++  ++ WL       G+++++ ++SLHAVS DP AYP   LYV ++    EE  +
Sbjct: 35  GTLYIAESRLSWLD--GSGLGFSLEYPTISLHAVSRDPNAYPQEHLYVMVNAKLGEE--S 94

Query: 109 SDSECEGEESENLDLAAVREMRLVPSNREELETLFDICCQCAELNPEPTEDQEE 163
            +   + +E +N D+  + E R VPS++  LE +F   C+C  L+P+P ++  +
Sbjct: 95  KEPPSDEDEEDNDDIEPISEFRFVPSDKSALEAMFTAMCECQALHPDPEDEDSD 144

[Close]

BLAST of Sed0027239 vs. ExPASy Swiss-Prot
Match: Q04753 (Methylosome subunit pICln OS=Rattus norvegicus OX=10116 GN=Clns1a PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.7e-14
Identity = 39/114 (34.21%), Postives = 68/114 (59.65%), Query Frame = 0


Query: 49  GTLYVSSRQVIWLSDVDKAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDDEECDN 108
           GTLY++  ++ WL       G+++++ ++SLHAVS DP AYP   LYV ++    EE  +
Sbjct: 35  GTLYIAESRLSWLD--GSGLGFSLEYPTISLHAVSRDPNAYPQEHLYVMVNARFGEE--S 94

Query: 109 SDSECEGEESENLDLAAVREMRLVPSNREELETLFDICCQCAELNPEPTEDQEE 163
            +   + +E +N D+  + E R VPS++  LE +F   C+C  L+P+P ++  +
Sbjct: 95  KEPFSDEDEDDNDDVEPISEFRFVPSDKSALEAMFTAMCECQALHPDPEDEDSD 144

[Close]

BLAST of Sed0027239 vs. ExPASy Swiss-Prot
Match: Q28678 (Methylosome subunit pICln OS=Oryctolagus cuniculus OX=9986 GN=CLNS1A PE=2 SV=2)

HSP 1 Score: 79.0 bits (193), Expect = 8.2e-14
Identity = 43/136 (31.62%), Postives = 73/136 (53.68%), Query Frame = 0


Query: 27  EVLMHALPSVAIVFDNRPPEFPGTLYVSSRQVIWLSDVDKAKGYAVDFLSMSLHAVSTDP 86
           E L H  P    V + +     GTLY++  ++ WL       G+++++ ++SLHAVS DP
Sbjct: 14  EGLRHQQPDTEAVLNGKGLG-TGTLYIAESRLSWLD--GSGLGFSLEYPTISLHAVSRDP 73

Query: 87  EAYPSPCLYVQIDTGDDEECDNSDSECEGEESENLDLAAVREMRLVPSNREELETLFDIC 146
            AYP   LYV ++    EE  + +   + EE  + D+  + E R VP ++  LE +F   
Sbjct: 74  NAYPQEHLYVMVNAKFGEE--SKELVADEEEDSDDDVEPISEFRFVPGDKSALEAMFTAM 133

Query: 147 CQCAELNPEPTEDQEE 163
           C+C  L+P+P ++  +
Sbjct: 134 CECQALHPDPEDEDSD 144

[Close]

BLAST of Sed0027239 vs. ExPASy Swiss-Prot
Match: P54106 (Methylosome subunit pICln OS=Xenopus laevis OX=8355 GN=clns1a PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.4e-13
Identity = 54/201 (26.87%), Postives = 98/201 (48.76%), Query Frame = 0


Query: 48  PGTLYVSSRQVIWLSDVDKAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDT----GDD 107
           PGTLY++  ++ WL+      G+++++ S+SLHA+S D  AYP   LYV +++     +D
Sbjct: 32  PGTLYIAESRLSWLN--GSGLGFSLEYPSISLHAISRDTAAYPEEHLYVMVNSKLADKED 91

Query: 108 EECDNSDSECEGEESENLDLAAVREMRLVPSNREELETLFDICCQCAELNPEP----TED 167
           +E   +D E E  E ++ D   + E+R VP  + +L  +F   C C  L+P+P    ++D
Sbjct: 92  KEAHMADQEEEESEDDDDDEEPITEIRFVPGEKSDLGEMFSAMCDCQALHPDPEDADSDD 151

Query: 168 QEEGQNWFFSADQLEEM---------PGLSGVVVDEEQFSANPANSIGHSNGDHDHLART 227
             EG  +   A +  ++          GLS +  + +       N + +S G+      T
Sbjct: 152 DYEGDEYDVEAHEQGQVDVPTFYTYEEGLSHLTTEGQATLERLENMLSNSIGNQ----HT 211

Query: 228 VLQLQINDQRFEDAEEMEPEN 232
           +  ++      E  + M+ EN
Sbjct: 212 MAGVRTEGPALEPEDGMDVEN 226

[Close]

BLAST of Sed0027239 vs. ExPASy TrEMBL
Match: A0A6J1H3I6 (chloride conductance regulatory protein ICln OS=Cucurbita moschata OX=3662 GN=LOC111459687 PE=3 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 5.8e-111
Identity = 200/237 (84.39%), Postives = 215/237 (90.72%), Query Frame = 0


Query: 1   MAMGLRVYTERTEDGLGLPVFDVSQGEVLMHALPSVAIVFDNRPPEFPGTLYVSSRQVIW 60
           M +GLR +TERT DGLGLPVFD SQGEVLMH +P+VAIVFDNRPPEFPGTLYVSS QV+W
Sbjct: 1   MGIGLRAFTERTGDGLGLPVFDASQGEVLMHTVPAVAIVFDNRPPEFPGTLYVSSSQVVW 60

Query: 61  LSDVDKAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDDEECDNSDSECEGEESEN 120
           LSDVD AKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQ+DTGD+EE DNSDSEC GEESEN
Sbjct: 61  LSDVDMAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQVDTGDEEESDNSDSECLGEESEN 120

Query: 121 LDLAAVREMRLVPSNREELETLFDICCQCAELNPEPTEDQEEGQ-NWFFSADQLEEMPGL 180
           LDL AVREMRLVPSN  ELE LFD+CCQCAELNP+PT D+EE + NWFFSADQLEEMPGL
Sbjct: 121 LDLGAVREMRLVPSNPAELEALFDVCCQCAELNPDPTGDEEEEEHNWFFSADQLEEMPGL 180

Query: 181 SGVVVDEEQFSANPANSIGHSNGDHDHLARTVLQLQINDQRFEDAEEMEPENNGNHH 237
           SG   D+E FS+NPANSIGHSNGDHD L+RTVLQLQINDQRFEDAEEMEPE+NG HH
Sbjct: 181 SGDGDDKEPFSSNPANSIGHSNGDHDQLSRTVLQLQINDQRFEDAEEMEPESNGKHH 237

[Close]

BLAST of Sed0027239 vs. ExPASy TrEMBL
Match: A0A6J1K1I5 (chloride conductance regulatory protein ICln OS=Cucurbita maxima OX=3661 GN=LOC111490870 PE=3 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 2.2e-110
Identity = 200/237 (84.39%), Postives = 216/237 (91.14%), Query Frame = 0


Query: 1   MAMGLRVYTERTEDGLGLPVFDVSQGEVLMHALPSVAIVFDNRPPEFPGTLYVSSRQVIW 60
           M +GLR++TERT DGLGLPVFD SQGEVLMH +P+VAIVFDNRPPEFPGTLYVSS QV+W
Sbjct: 1   MGIGLRLFTERTGDGLGLPVFDASQGEVLMHTVPAVAIVFDNRPPEFPGTLYVSSSQVVW 60

Query: 61  LSDVDKAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDDEECDNSDSECEGEESEN 120
           LSDVD AKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGD+EE DNSDSEC GEESEN
Sbjct: 61  LSDVDMAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDEEESDNSDSECLGEESEN 120

Query: 121 LDLAAVREMRLVPSNREELETLFDICCQCAELNPEPTEDQEEGQ-NWFFSADQLEEMPGL 180
           LDL AVREMRLVPSN  ELE LFD+CCQCAELNP+PT D+EE + NWFFSADQLEEMPGL
Sbjct: 121 LDLGAVREMRLVPSNPAELEALFDVCCQCAELNPDPTGDEEEEEHNWFFSADQLEEMPGL 180

Query: 181 SGVVVDEEQFSANPANSIGHSNGDHDHLARTVLQLQINDQRFEDAEEMEPENNGNHH 237
           S    D+EQFS++PANSIGHSNGDHD L+RTVLQLQINDQRFEDAEEMEPE+NG HH
Sbjct: 181 SRDGDDKEQFSSDPANSIGHSNGDHDQLSRTVLQLQINDQRFEDAEEMEPESNGKHH 237

[Close]

BLAST of Sed0027239 vs. ExPASy TrEMBL
Match: A0A5D3DBS0 (Chloride conductance regulatory protein ICln isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G001310 PE=3 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 9.5e-106
Identity = 195/237 (82.28%), Postives = 207/237 (87.34%), Query Frame = 0


Query: 1   MAMGLRVYTERTEDGLGLPVFDVSQGEVLMHALPSVAIVFDNRPPEFPGTLYVSSRQVIW 60
           M MGLR+YTERT +GLGLP FDV QGEVLMH LP+V IVFDNRPPEFPGTLYVSSRQV+W
Sbjct: 1   MTMGLRLYTERTGNGLGLPSFDVDQGEVLMHVLPAVGIVFDNRPPEFPGTLYVSSRQVVW 60

Query: 61  LSDVDKAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDDEECDNSDSECEGEESEN 120
           LSD + AKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDDEE +NSDSEC GEESEN
Sbjct: 61  LSDANMAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDDEELENSDSECHGEESEN 120

Query: 121 LDLAAVREMRLVPSNREELETLFDICCQCAELNPEPTEDQEEGQ-NWFFSADQLEEMPGL 180
            DL AVREMRLVPSN  ELETLF+I CQCAELNPEP  D+EE + NWFF ADQLE+MPGL
Sbjct: 121 FDLTAVREMRLVPSNPNELETLFEIFCQCAELNPEPNGDEEEEEHNWFFGADQLEQMPGL 180

Query: 181 SGVVVDEEQFSANPANSIGHSNGDHDHLARTVLQLQINDQRFEDAEEMEPENNGNHH 237
           S    DEEQFS+ P +SIGHSNGDHD LARTVLQLQINDQRFEDAEEMEPENN   H
Sbjct: 181 SVAGDDEEQFSSIPPSSIGHSNGDHDQLARTVLQLQINDQRFEDAEEMEPENNNGKH 237

[Close]

BLAST of Sed0027239 vs. ExPASy TrEMBL
Match: A0A1S3CTC6 (chloride conductance regulatory protein ICln isoform X1 OS=Cucumis melo OX=3656 GN=LOC103504664 PE=3 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 6.2e-105
Identity = 194/237 (81.86%), Postives = 207/237 (87.34%), Query Frame = 0


Query: 1   MAMGLRVYTERTEDGLGLPVFDVSQGEVLMHALPSVAIVFDNRPPEFPGTLYVSSRQVIW 60
           M MGLR+YTERT +GLGLP FDV QGEVLMH LP+V IVFDNRPPEFPGTLYVSSRQV+W
Sbjct: 1   MTMGLRLYTERTGNGLGLPSFDVDQGEVLMHVLPAVGIVFDNRPPEFPGTLYVSSRQVVW 60

Query: 61  LSDVDKAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDDEECDNSDSECEGEESEN 120
           LSD + AKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDDEE +NSDSEC GEESEN
Sbjct: 61  LSDANMAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDDEELENSDSECHGEESEN 120

Query: 121 LDLAAVREMRLVPSNREELETLFDICCQCAELNPEPTEDQEEGQ-NWFFSADQLEEMPGL 180
            DL AVREMRLVPSN  ELETLF+I CQCAELNPEP  D+EE + NWFF ADQLE+MPGL
Sbjct: 121 FDLTAVREMRLVPSNPNELETLFEIFCQCAELNPEPNGDEEEEEHNWFFGADQLEQMPGL 180

Query: 181 SGVVVDEEQFSANPANSIGHSNGDHDHLARTVLQLQINDQRFEDAEEMEPENNGNHH 237
           S    DEEQFS+ P +SIG+SNGDHD LARTVLQLQINDQRFEDAEEMEPENN   H
Sbjct: 181 SVAGDDEEQFSSIPPSSIGNSNGDHDQLARTVLQLQINDQRFEDAEEMEPENNNGKH 237

[Close]

BLAST of Sed0027239 vs. ExPASy TrEMBL
Match: A0A0A0KPP2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G171150 PE=3 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 1.8e-104
Identity = 193/236 (81.78%), Postives = 207/236 (87.71%), Query Frame = 0


Query: 1   MAMGLRVYTERTEDGLGLPVFDVSQGEVLMHALPSVAIVFDNRPPEFPGTLYVSSRQVIW 60
           M MGLR YT+RT +GLG P FDV QGEVLMH LP+V IVFDNRPPEFPGTLY+SSRQV+W
Sbjct: 1   MTMGLRPYTQRTGNGLGSPSFDVDQGEVLMHVLPAVGIVFDNRPPEFPGTLYISSRQVVW 60

Query: 61  LSDVDKAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDDEECDNSDSECEGEESEN 120
           LSDV  AKGYAVDFLSMSLHAVSTDPEAY SPCLYVQIDTGDDEE +NSDSEC GEESEN
Sbjct: 61  LSDVIMAKGYAVDFLSMSLHAVSTDPEAYTSPCLYVQIDTGDDEELENSDSECHGEESEN 120

Query: 121 LDLAAVREMRLVPSNREELETLFDICCQCAELNPEPTEDQEEGQ-NWFFSADQLEEMPGL 180
            DLAAVREMRLVPSN  ELETLF+I CQCAELNPEPT D+EE + NWFF ADQLE+MPGL
Sbjct: 121 FDLAAVREMRLVPSNPNELETLFEIFCQCAELNPEPTGDEEEEEHNWFFGADQLEQMPGL 180

Query: 181 SGVVVDEEQFSANPANSIGHSNGDHDHLARTVLQLQINDQRFEDAEEMEPENNGNH 236
           S    DEEQFS+ P +SIGHSNGDHD LARTVLQLQIND+RFEDA+EMEPENNG H
Sbjct: 181 SVAGDDEEQFSSIPPSSIGHSNGDHDQLARTVLQLQINDRRFEDADEMEPENNGKH 236

[Close]

BLAST of Sed0027239 vs. TAIR 10
Match: AT5G62290.2 (nucleotide-sensitive chloride conductance regulator (ICln) family protein )

HSP 1 Score: 263.1 bits (671), Expect = 2.2e-70
Identity = 140/237 (59.07%), Postives = 170/237 (71.73%), Query Frame = 0


Query: 1   MAMGLRVYTERTEDGLGLPVFDVSQGEVLMHALPSVAIVFDNRPPEFPGTLYVSSRQVIW 60
           M  GLR +T RTEDG G PV D S GE LMH   SVA+   NRP E PGTLY++SR++IW
Sbjct: 1   MVAGLRDFTLRTEDGSGKPVLDESNGEELMHVQTSVAVALGNRPIESPGTLYITSRKLIW 60

Query: 61  LSDVDKAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDDEECDNSDSECEGEESEN 120
           LSDVD AKGYAVDFLS+SLHAVS DPEAY SPC+Y QI+  +DE     D E + E +E 
Sbjct: 61  LSDVDMAKGYAVDFLSISLHAVSRDPEAYSSPCIYTQIEVEEDE-----DDESDSESTEV 120

Query: 121 LDLAAVREMRLVPSNREELETLFDICCQCAELNPEPTEDQEE-GQNWFFSADQLEEMPGL 180
           LDL+ +REMRLVPS+  +LETLFD+ C+CAELNPEP +++EE G NW FSADQ++   G 
Sbjct: 121 LDLSKIREMRLVPSDSTQLETLFDVFCECAELNPEPVQEEEESGHNWVFSADQMDVRGGD 180

Query: 181 SGVVVDEEQFSANPANSIGHSNGDHDHLARTVLQLQINDQRFEDAEEMEPENNGNHH 237
                 E Q S +P + IGHSNGD + L + +L+LQINDQRFEDAEEM  E+    H
Sbjct: 181 DDA---EWQISQSPTSVIGHSNGD-EGLNQPMLELQINDQRFEDAEEMVHESETKDH 228

[Close]

BLAST of Sed0027239 vs. TAIR 10
Match: AT5G62290.1 (nucleotide-sensitive chloride conductance regulator (ICln) family protein )

HSP 1 Score: 262.7 bits (670), Expect = 2.9e-70
Identity = 140/238 (58.82%), Postives = 170/238 (71.43%), Query Frame = 0


Query: 1   MAMGLRVYTERTEDGLGLPVFDVSQGEVLMHALPSVAIVFDNRPPEFPGTLYVSSRQVIW 60
           M  GLR +T RTEDG G PV D S GE LMH   SVA+   NRP E PGTLY++SR++IW
Sbjct: 1   MVAGLRDFTLRTEDGSGKPVLDESNGEELMHVQTSVAVALGNRPIESPGTLYITSRKLIW 60

Query: 61  LSDVDKAKGYAVDFLSMSLHAVSTDPEAYPSPCLYVQIDTGDDEECDNSDSECEGEESEN 120
           LSDVD AKGYAVDFLS+SLHAVS DPEAY SPC+Y QI+  +DE     D E + E +E 
Sbjct: 61  LSDVDMAKGYAVDFLSISLHAVSRDPEAYSSPCIYTQIEVEEDE-----DDESDSESTEV 120

Query: 121 LDLAAVREMRLVPSNREELETLFDICCQCAELNPEPTEDQEE--GQNWFFSADQLEEMPG 180
           LDL+ +REMRLVPS+  +LETLFD+ C+CAELNPEP +++EE  G NW FSADQ++   G
Sbjct: 121 LDLSKIREMRLVPSDSTQLETLFDVFCECAELNPEPVQEEEEESGHNWVFSADQMDVRGG 180

Query: 181 LSGVVVDEEQFSANPANSIGHSNGDHDHLARTVLQLQINDQRFEDAEEMEPENNGNHH 237
                  E Q S +P + IGHSNGD + L + +L+LQINDQRFEDAEEM  E+    H
Sbjct: 181 DDDA---EWQISQSPTSVIGHSNGD-EGLNQPMLELQINDQRFEDAEEMVHESETKDH 229

The following BLAST results are available for this feature:

BLAST of Sed0027239 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022958470.1	1.2e-110	84.39	chloride conductance regulatory protein ICln [Cucurbita moschata]	[more]
XP_023533954.1	4.5e-110	84.39	chloride conductance regulatory protein ICln [Cucurbita pepo subsp. pepo]	[more]
KAG7035583.1	4.5e-110	84.39	Chloride conductance regulatory protein ICln [Cucurbita argyrosperma subsp. argy...	[more]
XP_022995276.1	4.5e-110	84.39	chloride conductance regulatory protein ICln [Cucurbita maxima]	[more]
KAG6605674.1	3.8e-109	83.97	Chloride conductance regulatory protein ICln, partial [Cucurbita argyrosperma su...	[more]

BLAST of Sed0027239 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LVA7	4.0e-69	58.82	Chloride conductance regulatory protein ICln OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q61189	2.2e-14	34.21	Methylosome subunit pICln OS=Mus musculus OX=10090 GN=Clns1a PE=1 SV=1	[more]
Q04753	3.7e-14	34.21	Methylosome subunit pICln OS=Rattus norvegicus OX=10116 GN=Clns1a PE=1 SV=1	[more]
Q28678	8.2e-14	31.62	Methylosome subunit pICln OS=Oryctolagus cuniculus OX=9986 GN=CLNS1A PE=2 SV=2	[more]
P54106	1.4e-13	26.87	Methylosome subunit pICln OS=Xenopus laevis OX=8355 GN=clns1a PE=2 SV=1	[more]

BLAST of Sed0027239 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H3I6	5.8e-111	84.39	chloride conductance regulatory protein ICln OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1K1I5	2.2e-110	84.39	chloride conductance regulatory protein ICln OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A5D3DBS0	9.5e-106	82.28	Chloride conductance regulatory protein ICln isoform X1 OS=Cucumis melo var. mak...	[more]
A0A1S3CTC6	6.2e-105	81.86	chloride conductance regulatory protein ICln isoform X1 OS=Cucumis melo OX=3656 ...	[more]
A0A0A0KPP2	1.8e-104	81.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G171150 PE=3 SV=1	[more]

BLAST of Sed0027239 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G62290.2	2.2e-70	59.07	nucleotide-sensitive chloride conductance regulator (ICln) family protein	[more]
AT5G62290.1	2.9e-70	58.82	nucleotide-sensitive chloride conductance regulator (ICln) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003521	ICln	PRINTS	PR01348	ICLNCHANNEL	coord: 69..83 score: 43.33 coord: 46..61 score: 39.58 coord: 124..136 score: 35.9
IPR011993	PH-like domain superfamily	GENE3D	2.30.29.30		coord: 21..160 e-value: 1.8E-31 score: 110.4
IPR039924	ICln/Lot5	PFAM	PF03517	Voldacs	coord: 49..170 e-value: 3.9E-24 score: 85.4
IPR039924	ICln/Lot5	PANTHER	PTHR21399	CHLORIDE CONDUCTANCE REGULATORY PROTEIN ICLN	coord: 3..236
None	No IPR available	PANTHER	PTHR21399:SF5	BNAA02G33340D PROTEIN	coord: 3..236

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0027239.1	Sed0027239.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006884	cell volume homeostasis
biological_process	GO:0006821	chloride transport
biological_process	GO:0045292	mRNA cis splicing, via spliceosome
biological_process	GO:0000387	spliceosomal snRNP assembly
cellular_component	GO:0005829	cytosol
cellular_component	GO:0034709	methylosome
cellular_component	GO:0034715	pICln-Sm protein complex
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005681	spliceosomal complex