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Sed0027226 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACAAAATTGAATGGGTAAAAGATTACCTCTCGAATTTTCAAAGTGCCAATCAAGGAGCTATTCGTTCATCTCATTATGCGGGTCCTCCTAGAGATCTGAATGTTGGTAGCTATTGGCGCTTGCCTGAGGCTGGTCAGTTTGTCTTGAACGTAGATGCAACATGCTCAAAAAGTTGGAACCGAGTTGGCCTTGGGGTCGTCATCTGGGATCATTGCGGTAAGTGTGTGATGGCGTCGGCTAACTTTCATCACTCCCAGCTAAATGCATTCTCAGCTGACGCTCTAGCCTTGTTGTTTGGCCTGAGGTTGGGGGGTGAGTAG ATGGACAAAATTGAATGGGTAAAAGATTACCTCTCGAATTTTCAAAGTGCCAATCAAGGAGCTATTCGTTCATCTCATTATGCGGGTCCTCCTAGAGATCTGAATGTTGGTAGCTATTGGCGCTTGCCTGAGGCTGGTCAGTTTGTCTTGAACGTAGATGCAACATGCTCAAAAAGTTGGAACCGAGTTGGCCTTGGGGTCGTCATCTGGGATCATTGCGGTAAGTGTGTGATGGCGTCGGCTAACTTTCATCACTCCCAGCTAAATGCATTCTCAGCTGACGCTCTAGCCTTGTTGTTTGGCCTGAGGTTGGGGGGTGAGTAG ATGGACAAAATTGAATGGGTAAAAGATTACCTCTCGAATTTTCAAAGTGCCAATCAAGGAGCTATTCGTTCATCTCATTATGCGGGTCCTCCTAGAGATCTGAATGTTGGTAGCTATTGGCGCTTGCCTGAGGCTGGTCAGTTTGTCTTGAACGTAGATGCAACATGCTCAAAAAGTTGGAACCGAGTTGGCCTTGGGGTCGTCATCTGGGATCATTGCGGTAAGTGTGTGATGGCGTCGGCTAACTTTCATCACTCCCAGCTAAATGCATTCTCAGCTGACGCTCTAGCCTTGTTGTTTGGCCTGAGGTTGGGGGGTGAGTAG MDKIEWVKDYLSNFQSANQGAIRSSHYAGPPRDLNVGSYWRLPEAGQFVLNVDATCSKSWNRVGLGVVIWDHCGKCVMASANFHHSQLNAFSADALALLFGLRLGGE Homology
BLAST of Sed0027226 vs. NCBI nr
Match: TXG53482.1 (hypothetical protein EZV62_022651 [Acer yangbiense]) HSP 1 Score: 61.6 bits (148), Expect = 4.7e-06 Identity = 35/103 (33.98%), Postives = 54/103 (52.43%), Query Frame = 0
BLAST of Sed0027226 vs. NCBI nr
Match: PON90739.1 (Ribonuclease H-like domain containing protein [Trema orientale]) HSP 1 Score: 61.2 bits (147), Expect = 6.1e-06 Identity = 36/102 (35.29%), Postives = 48/102 (47.06%), Query Frame = 0
BLAST of Sed0027226 vs. NCBI nr
Match: XP_024628663.1 (uncharacterized protein LOC112417327 [Medicago truncatula]) HSP 1 Score: 55.8 bits (133), Expect = 2.6e-04 Identity = 33/101 (32.67%), Postives = 49/101 (48.51%), Query Frame = 0
BLAST of Sed0027226 vs. NCBI nr
Match: XP_024626530.1 (uncharacterized protein LOC112416549 [Medicago truncatula]) HSP 1 Score: 55.5 bits (132), Expect = 3.4e-04 Identity = 33/101 (32.67%), Postives = 49/101 (48.51%), Query Frame = 0
BLAST of Sed0027226 vs. NCBI nr
Match: TXG67924.1 (hypothetical protein EZV62_009199 [Acer yangbiense]) HSP 1 Score: 53.9 bits (128), Expect = 9.8e-04 Identity = 29/102 (28.43%), Postives = 49/102 (48.04%), Query Frame = 0
BLAST of Sed0027226 vs. ExPASy TrEMBL
Match: A0A5C7HA98 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_022651 PE=4 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 2.3e-06 Identity = 35/103 (33.98%), Postives = 54/103 (52.43%), Query Frame = 0
BLAST of Sed0027226 vs. ExPASy TrEMBL
Match: A0A5C7IG10 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_009199 PE=4 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 4.7e-04 Identity = 29/102 (28.43%), Postives = 49/102 (48.04%), Query Frame = 0
BLAST of Sed0027226 vs. ExPASy TrEMBL
Match: A0A2Z6MRJ3 (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_274760 PE=4 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 8.1e-04 Identity = 26/64 (40.62%), Postives = 41/64 (64.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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