Sed0027219 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTCCATTACTTTCTTGATCAATCCAAACAACACTCTTCAATGACAGGCTTTACGATAACCGCTGGGTTGAAAGCTCTTTTGGCAGAAGCAGATGGGGGTTTGGATTTAAACTCCTGCGGCATTCGAAATCTACTCTGTAATGGCGTCCTCTTGAGCAATGGAACTAAGGCAAGTAGTCGAACTCTACGTACGTTTTTCGTAATTGTTAATTATGTATAATATATGTATATCACTTCTACGTCAATTACAGATCATAACCAAACCTCATGCATAATCCAAATGAGGGAGTTCTGTCACGACCTCGATCGTTTAAGGATTTTTTTATAGTCCTGATTGGTTTGAAAATTATTTTGAATGAATGCAGAAAGTTGTGCTTGACAAGAGCCTAAACGTCTATACCATCATTTTCTATGCAAGAGCTCTGACAATAGCTTGGATTGATGATCGCCGATATTGGCGATGGACAAGGGAGGGCTGGTATAATCCTAAGCTTAACCCTAACATTGAATTAAATATGCTATGATATGCATGTTAGATTATGACTAAATAAAACTTGCAGTGGGAGCTCAACCGAAGTGGCTGAGCTTATACAAGTAAGTTGGCTCGATATCAGTGGAAAGATCCAAGCATCTAAGCTATTAGCAGAAATTCATTACGAAATAGTATTCGAGATATATATTAAAACTGGGGCCAGTGGGTTCGAAATTCCTGTGAACCTCAGGCTGAAGGTGCCAAACCAGTGCCCCCAAGAACACAAAGTAAACCTGACCACGTTTCCAAGAGATCGATGGGTCGATGTTTCGGTCGGCATTTTCAAACTGAGTGCATCTGATATTTGTGGTTGCGAGGACGTCGAGTTCAGTCTGTATGAACATGGAGGCCACTGGAAGACCGGCTTGCTTGTCAGAGCTGGTATCATTCGACCCAAGCAACTCTGCGGTTGAACCCTTTATACCAACTACTATATCAAAACATAAATAAAGCACGTTGTACCCACCTTTTGCTTCATCTTTCTCTTCTAAATATATATGTATCAGAAAAAAAAATATGTATGGATATATATATATATATATATATATATATATATATATATATAATGTAATAGTATGGAAACTTATATATGAATAGTATCACCTTTTGCGTACTAGCAACAAGGTTAAGTTCAAA TCTCCATTACTTTCTTGATCAATCCAAACAACACTCTTCAATGACAGGCTTTACGATAACCGCTGGGTTGAAAGCTCTTTTGGCAGAAGCAGATGGGGGTTTGGATTTAAACTCCTGCGGCATTCGAAATCTACTCTGTAATGGCGTCCTCTTGAGCAATGGAACTAAGAAAGTTGTGCTTGACAAGAGCCTAAACGTCTATACCATCATTTTCTATGCAAGAGCTCTGACAATAGCTTGGATTGATGATCGCCGATATTGGCGATGGACAAGGGAGGGCTGTGGGAGCTCAACCGAAGTGGCTGAGCTTATACAAGTAAGTTGGCTCGATATCAGTGGAAAGATCCAAGCATCTAAGCTATTAGCAGAAATTCATTACGAAATAGTATTCGAGATATATATTAAAACTGGGGCCAGTGGGTTCGAAATTCCTGTGAACCTCAGGCTGAAGGTGCCAAACCAGTGCCCCCAAGAACACAAAGTAAACCTGACCACGTTTCCAAGAGATCGATGGGTCGATGTTTCGGTCGGCATTTTCAAACTGAGTGCATCTGATATTTGTGGTTGCGAGGACGTCGAGTTCAGTCTGTATGAACATGGAGGCCACTGGAAGACCGGCTTGCTTGTCAGAGCTGGTATCATTCGACCCAAGCAACTCTGCGGTTGAACCCTTTATACCAACTACTATATCAAAACATAAATAAAGCACGTTGTACCCACCTTTTGCTTCATCTTTCTCTTCTAAATATATATGTATCAGAAAAAAAAATATGTATGGATATATATATATATATATATATATATATATATATATATATAATGTAATAGTATGGAAACTTATATATGAATAGTATCACCTTTTGCGTACTAGCAACAAGGTTAAGTTCAAA ATGACAGGCTTTACGATAACCGCTGGGTTGAAAGCTCTTTTGGCAGAAGCAGATGGGGGTTTGGATTTAAACTCCTGCGGCATTCGAAATCTACTCTGTAATGGCGTCCTCTTGAGCAATGGAACTAAGAAAGTTGTGCTTGACAAGAGCCTAAACGTCTATACCATCATTTTCTATGCAAGAGCTCTGACAATAGCTTGGATTGATGATCGCCGATATTGGCGATGGACAAGGGAGGGCTGTGGGAGCTCAACCGAAGTGGCTGAGCTTATACAAGTAAGTTGGCTCGATATCAGTGGAAAGATCCAAGCATCTAAGCTATTAGCAGAAATTCATTACGAAATAGTATTCGAGATATATATTAAAACTGGGGCCAGTGGGTTCGAAATTCCTGTGAACCTCAGGCTGAAGGTGCCAAACCAGTGCCCCCAAGAACACAAAGTAAACCTGACCACGTTTCCAAGAGATCGATGGGTCGATGTTTCGGTCGGCATTTTCAAACTGAGTGCATCTGATATTTGTGGTTGCGAGGACGTCGAGTTCAGTCTGTATGAACATGGAGGCCACTGGAAGACCGGCTTGCTTGTCAGAGCTGGTATCATTCGACCCAAGCAACTCTGCGGTTGA MTGFTITAGLKALLAEADGGLDLNSCGIRNLLCNGVLLSNGTKKVVLDKSLNVYTIIFYARALTIAWIDDRRYWRWTREGCGSSTEVAELIQVSWLDISGKIQASKLLAEIHYEIVFEIYIKTGASGFEIPVNLRLKVPNQCPQEHKVNLTTFPRDRWVDVSVGIFKLSASDICGCEDVEFSLYEHGGHWKTGLLVRAGIIRPKQLCG Homology
BLAST of Sed0027219 vs. NCBI nr
Match: KDP23149.1 (hypothetical protein JCGZ_00141 [Jatropha curcas]) HSP 1 Score: 164.9 bits (416), Expect = 7.7e-37 Identity = 86/198 (43.43%), Postives = 121/198 (61.11%), Query Frame = 0
BLAST of Sed0027219 vs. NCBI nr
Match: XP_012089530.1 (lectin [Jatropha curcas]) HSP 1 Score: 164.9 bits (416), Expect = 7.7e-37 Identity = 86/198 (43.43%), Postives = 121/198 (61.11%), Query Frame = 0
BLAST of Sed0027219 vs. NCBI nr
Match: XP_038888354.1 (lectin-like [Benincasa hispida]) HSP 1 Score: 162.9 bits (411), Expect = 2.9e-36 Identity = 78/174 (44.83%), Postives = 107/174 (61.49%), Query Frame = 0
BLAST of Sed0027219 vs. NCBI nr
Match: AAA92465.1 (phloem protein 2 [Cucurbita argyrosperma]) HSP 1 Score: 160.6 bits (405), Expect = 1.4e-35 Identity = 85/200 (42.50%), Postives = 119/200 (59.50%), Query Frame = 0
BLAST of Sed0027219 vs. NCBI nr
Match: KAF5935965.1 (hypothetical protein HYC85_027094 [Camellia sinensis]) HSP 1 Score: 159.1 bits (401), Expect = 4.2e-35 Identity = 79/199 (39.70%), Postives = 121/199 (60.80%), Query Frame = 0
BLAST of Sed0027219 vs. ExPASy Swiss-Prot
Match: C0HJV2 (Lectin OS=Luffa acutangula OX=56866 PE=1 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 3.7e-34 Identity = 76/172 (44.19%), Postives = 106/172 (61.63%), Query Frame = 0
BLAST of Sed0027219 vs. ExPASy Swiss-Prot
Match: O81865 (Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana OX=3702 GN=PP2A1 PE=2 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 3.2e-30 Identity = 76/200 (38.00%), Postives = 108/200 (54.00%), Query Frame = 0
BLAST of Sed0027219 vs. ExPASy Swiss-Prot
Match: P0DSP5 (Lectin OS=Coccinia grandis OX=387127 PE=1 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 1.1e-22 Identity = 50/138 (36.23%), Postives = 75/138 (54.35%), Query Frame = 0
BLAST of Sed0027219 vs. ExPASy Swiss-Prot
Match: Q9C8U9 (Uncharacterized protein PHLOEM PROTEIN 2-LIKE A4 OS=Arabidopsis thaliana OX=3702 GN=PP2A4 PE=4 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 4.2e-22 Identity = 61/155 (39.35%), Postives = 87/155 (56.13%), Query Frame = 0
BLAST of Sed0027219 vs. ExPASy Swiss-Prot
Match: O81866 (Protein PHLOEM PROTEIN 2-LIKE A2 OS=Arabidopsis thaliana OX=3702 GN=PP2A2 PE=2 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 1.4e-17 Identity = 43/121 (35.54%), Postives = 71/121 (58.68%), Query Frame = 0
BLAST of Sed0027219 vs. ExPASy TrEMBL
Match: A0A067JUE7 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_00141 PE=4 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 3.7e-37 Identity = 86/198 (43.43%), Postives = 121/198 (61.11%), Query Frame = 0
BLAST of Sed0027219 vs. ExPASy TrEMBL
Match: Q39461 (Phloem protein 2 OS=Cucurbita argyrosperma OX=34294 GN=PP2 PE=2 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 7.0e-36 Identity = 85/200 (42.50%), Postives = 119/200 (59.50%), Query Frame = 0
BLAST of Sed0027219 vs. ExPASy TrEMBL
Match: A0A7J7G6N9 (Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_027094 PE=4 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 2.0e-35 Identity = 79/199 (39.70%), Postives = 121/199 (60.80%), Query Frame = 0
BLAST of Sed0027219 vs. ExPASy TrEMBL
Match: A0A1Q3B9A9 (PP2 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_07881 PE=4 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 4.5e-35 Identity = 80/197 (40.61%), Postives = 119/197 (60.41%), Query Frame = 0
BLAST of Sed0027219 vs. ExPASy TrEMBL
Match: A0A2U1NVK8 (Phloem protein 2-A1 OS=Artemisia annua OX=35608 GN=CTI12_AA223620 PE=4 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 7.7e-35 Identity = 81/197 (41.12%), Postives = 119/197 (60.41%), Query Frame = 0
BLAST of Sed0027219 vs. TAIR 10
Match: AT4G19840.1 (phloem protein 2-A1 ) HSP 1 Score: 133.3 bits (334), Expect = 2.3e-31 Identity = 76/200 (38.00%), Postives = 108/200 (54.00%), Query Frame = 0
BLAST of Sed0027219 vs. TAIR 10
Match: AT1G33920.1 (phloem protein 2-A4 ) HSP 1 Score: 106.3 bits (264), Expect = 3.0e-23 Identity = 61/155 (39.35%), Postives = 87/155 (56.13%), Query Frame = 0
BLAST of Sed0027219 vs. TAIR 10
Match: AT4G19850.1 (lectin-related ) HSP 1 Score: 91.3 bits (225), Expect = 1.0e-18 Identity = 43/121 (35.54%), Postives = 71/121 (58.68%), Query Frame = 0
BLAST of Sed0027219 vs. TAIR 10
Match: AT4G19850.2 (lectin-related ) HSP 1 Score: 83.6 bits (205), Expect = 2.1e-16 Identity = 40/125 (32.00%), Postives = 70/125 (56.00%), Query Frame = 0
BLAST of Sed0027219 vs. TAIR 10
Match: AT5G45090.1 (phloem protein 2-A7 ) HSP 1 Score: 79.7 bits (195), Expect = 3.0e-15 Identity = 55/177 (31.07%), Postives = 86/177 (48.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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