
Sed0027217 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCATTTCCAATCAAATCAAACCAATAAAAAAAAAACCCAATTCTTCTTTATGTTATATAATTTTTGAAGGTTTAAAAAACAGAGAGAGCAGAGAAATTTGGTAAAAGGAAAAAAAAAATGGAAGAAATAGAAGTAGTGAAATGCGAGTGTTGCGGATTGAAAGAAGAATGCACACAGCATTACATTTCTCAAGTGAAAGCCAACTTCGACGCCAAATGGCTTTGTGGGCTCTGTTCTGAAGCTGTTCGTGACGAGATTTTCCGGTCATCGTCCGGCAACCTGTCGCCGCCGTCCCGGATTCAAGCCGCCGTTAATGCCCACATGCTGTTCTGCCGGAAGTTCAAGGCCAACCCTGCCGTTAGAGTCGCCGACGGCATGAAGCAAATCTTGAGAAGGCGCTCTTCCGACTTGTCGTCTTTCTCGCCTGCCCAATCCCCTTCTTCTTCCGCTAGTTCCAAGGTTCGCGACATGTCGTCTTTCTCTAATTCCGACTTTACATAAAATTTCCCAAGACTTTTATTATTTAATAATGTGTTGTTCGCAGTTTTGCCCTCTTTTTTTTTTTTTTTTGAATTTAAAAATACTTTTTTTTTTCGAGAAAGTGGATTTTCTTGGAAAGTATAAGAAAATGGATGATGAATAACCTCTCCTCTACCCACTCC CTCATTTCCAATCAAATCAAACCAATAAAAAAAAAACCCAATTCTTCTTTATGTTATATAATTTTTGAAGGTTTAAAAAACAGAGAGAGCAGAGAAATTTGGTAAAAGGAAAAAAAAAATGGAAGAAATAGAAGTAGTGAAATGCGAGTGTTGCGGATTGAAAGAAGAATGCACACAGCATTACATTTCTCAAGTGAAAGCCAACTTCGACGCCAAATGGCTTTGTGGGCTCTGTTCTGAAGCTGTTCGTGACGAGATTTTCCGGTCATCGTCCGGCAACCTGTCGCCGCCGTCCCGGATTCAAGCCGCCGTTAATGCCCACATGCTGTTCTGCCGGAAGTTCAAGGCCAACCCTGCCGTTAGAGTCGCCGACGGCATGAAGCAAATCTTGAGAAGGCGCTCTTCCGACTTGTCGTCTTTCTCGCCTGCCCAATCCCCTTCTTCTTCCGCTAGTTCCAAGGTTCGCGACATGTCGTCTTTCTCTAATTCCGACTTTACATAAAATTTCCCAAGACTTTTATTATTTAATAATGTGTTGTTCGCAGTTTTGCCCTCTTTTTTTTTTTTTTTTGAATTTAAAAATACTTTTTTTTTTCGAGAAAGTGGATTTTCTTGGAAAGTATAAGAAAATGGATGATGAATAACCTCTCCTCTACCCACTCC ATGGAAGAAATAGAAGTAGTGAAATGCGAGTGTTGCGGATTGAAAGAAGAATGCACACAGCATTACATTTCTCAAGTGAAAGCCAACTTCGACGCCAAATGGCTTTGTGGGCTCTGTTCTGAAGCTGTTCGTGACGAGATTTTCCGGTCATCGTCCGGCAACCTGTCGCCGCCGTCCCGGATTCAAGCCGCCGTTAATGCCCACATGCTGTTCTGCCGGAAGTTCAAGGCCAACCCTGCCGTTAGAGTCGCCGACGGCATGAAGCAAATCTTGAGAAGGCGCTCTTCCGACTTGTCGTCTTTCTCGCCTGCCCAATCCCCTTCTTCTTCCGCTAGTTCCAAGGTTCGCGACATGTCGTCTTTCTCTAATTCCGACTTTACATAA MEEIEVVKCECCGLKEECTQHYISQVKANFDAKWLCGLCSEAVRDEIFRSSSGNLSPPSRIQAAVNAHMLFCRKFKANPAVRVADGMKQILRRRSSDLSSFSPAQSPSSSASSKVRDMSSFSNSDFT Homology
BLAST of Sed0027217 vs. NCBI nr
Match: XP_023514443.1 (uncharacterized protein LOC111778702 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 195.7 bits (496), Expect = 2.5e-46 Identity = 101/124 (81.45%), Postives = 107/124 (86.29%), Query Frame = 0
BLAST of Sed0027217 vs. NCBI nr
Match: KAG7026232.1 (hypothetical protein SDJN02_12731, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 187.2 bits (474), Expect = 8.8e-44 Identity = 102/128 (79.69%), Postives = 110/128 (85.94%), Query Frame = 0
BLAST of Sed0027217 vs. NCBI nr
Match: KAG6593885.1 (hypothetical protein SDJN03_13361, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 183.0 bits (463), Expect = 1.7e-42 Identity = 100/128 (78.12%), Postives = 109/128 (85.16%), Query Frame = 0
BLAST of Sed0027217 vs. NCBI nr
Match: XP_023000187.1 (uncharacterized protein LOC111494477 [Cucurbita maxima]) HSP 1 Score: 181.4 bits (459), Expect = 4.8e-42 Identity = 96/119 (80.67%), Postives = 101/119 (84.87%), Query Frame = 0
BLAST of Sed0027217 vs. NCBI nr
Match: KAA0040802.1 (hypothetical protein E6C27_scaffold333G00170 [Cucumis melo var. makuwa] >TYK17783.1 hypothetical protein E5676_scaffold306G00250 [Cucumis melo var. makuwa]) HSP 1 Score: 172.2 bits (435), Expect = 2.9e-39 Identity = 93/128 (72.66%), Postives = 108/128 (84.38%), Query Frame = 0
BLAST of Sed0027217 vs. ExPASy TrEMBL
Match: A0A6J1KCY5 (uncharacterized protein LOC111494477 OS=Cucurbita maxima OX=3661 GN=LOC111494477 PE=4 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 2.3e-42 Identity = 96/119 (80.67%), Postives = 101/119 (84.87%), Query Frame = 0
BLAST of Sed0027217 vs. ExPASy TrEMBL
Match: A0A5D3D0Q9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00250 PE=4 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 1.4e-39 Identity = 93/128 (72.66%), Postives = 108/128 (84.38%), Query Frame = 0
BLAST of Sed0027217 vs. ExPASy TrEMBL
Match: A0A0A0K5L1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G234115 PE=4 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 9.2e-39 Identity = 94/131 (71.76%), Postives = 105/131 (80.15%), Query Frame = 0
BLAST of Sed0027217 vs. ExPASy TrEMBL
Match: A0A5N6RGT5 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_015665 PE=4 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 4.0e-34 Identity = 81/122 (66.39%), Postives = 94/122 (77.05%), Query Frame = 0
BLAST of Sed0027217 vs. ExPASy TrEMBL
Match: A0A059D154 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_B01080 PE=4 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 1.5e-33 Identity = 78/125 (62.40%), Postives = 95/125 (76.00%), Query Frame = 0
BLAST of Sed0027217 vs. TAIR 10
Match: AT4G14819.1 (Protein of unknown function (DUF1677) ) HSP 1 Score: 133.7 bits (335), Expect = 1.1e-31 Identity = 66/97 (68.04%), Postives = 73/97 (75.26%), Query Frame = 0
BLAST of Sed0027217 vs. TAIR 10
Match: AT3G22540.1 (Protein of unknown function (DUF1677) ) HSP 1 Score: 125.2 bits (313), Expect = 3.8e-29 Identity = 65/114 (57.02%), Postives = 83/114 (72.81%), Query Frame = 0
BLAST of Sed0027217 vs. TAIR 10
Match: AT1G72510.1 (Protein of unknown function (DUF1677) ) HSP 1 Score: 82.0 bits (201), Expect = 3.7e-16 Identity = 41/97 (42.27%), Postives = 56/97 (57.73%), Query Frame = 0
BLAST of Sed0027217 vs. TAIR 10
Match: AT1G72510.2 (Protein of unknown function (DUF1677) ) HSP 1 Score: 82.0 bits (201), Expect = 3.7e-16 Identity = 41/97 (42.27%), Postives = 56/97 (57.73%), Query Frame = 0
BLAST of Sed0027217 vs. TAIR 10
Match: AT1G79770.1 (Protein of unknown function (DUF1677) ) HSP 1 Score: 81.6 bits (200), Expect = 4.9e-16 Identity = 49/123 (39.84%), Postives = 70/123 (56.91%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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