Sed0027185 (gene) Chayote v1

Overview


Name	Sed0027185
Type	gene
Organism	Sechium edule (Chayote v1)
Description	50S ribosomal protein L4
Location	LG14: 22140040 .. 22143721 (+)
RNA-Seq Expression	Sed0027185
Synteny	Sed0027185

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCATCAAGCCCGGCCCGTCAATGCCCTTTTCACTTCGTCTCCCTCGCAAAGCTCTGTGCTTTTCTCATTCTCATAACCTGCAAAGCAAGCTCGTCCTGTTCGGCTCGGAGTCTGCTGATCTTCCATTCTCATCCTCTACGCTCGATTCAGGTTTCTATTTCTTTCAACCTTTACGTTCGTTTTGTATCTCTTTTTCACTTAGGGATTTCGTCGAACACCTTACAGTCATGGCTGTAATCTACGCGGTGGTAATTTCAGTAGACAAATTCCTATGGTGTTGATGTTTTCTGAAACGTTTGGTTAATTTCTTTCAATTAATTTCTCACGAATGCCTACAGAATCGTGTAGCCTCCATAATTCTACATGTGGCATGTCCCCAAGGGGTGGTATAATGGTTGAAGACTTGGGCTTTGATGGTATGCTCCCCTCTAAGTCTCAGGTTTTCAGCTGTGACATTACTCCTTCTATGTCTCATGGTGCCTGGACCTTGTTTCAAAAACAAATTCTACATGTGGCATTACATCATTTGTTGGTTACTATTGGAGCTTACTTCATTACATCAAGCCATCTTTATTTTATTGAGCAACCATATTGTCTTTGGGGTTCCGTGTACTTGCCTCAAGGTCTTAGGTTTGAAAATTACCTGTAGCATTAATTTCTAGACATCTTCCTGCGTGACCAGGGGCGAGCACGGTTACCTCCGGTATAGTGAAGCAAAATTCTAATTTCCCGGTTTCCAAAAAAATATATTGTTTTATATTGAACTTAGATTGAGGTATGGTGCTAAGATTTCAGAGAATTTACTCTTGTAGATGAATTGGTAGCTGTCTGATTGTTGCAATACTCTTTTAGTGGTCTGCTGTAATTATGGCTATCTCAATGTCGAGAAGGCTGTTGCGCTCTATGGGATCGTTGTCAACACTTGGGAAATGCAATTCTGCGTGTACTGTCAATCAGTCATTTTATAATTTCCATGGTAATTCATTCTCATTTCTTCCTTATTTCTAGTTTTTTATGTGTGTGCAATTTATTTTTCTTGTACGTATAGATGATTTCTTCTGATTAATTAATTTTATGGTGCGTTTTGAGTAGAAATTTATGGCCGAATTAATGGGAGTAGCTCTATGTTTACGGGCTATTCTACCCTTTTGAAGGTACACTTTTGATTTATAATATCTGTTTTGAAGGTTCTATCTTTTACTCGAGATACATGATATTAAAGTTTGTAGAATTTGGATCAAAATCATATCTTGATAATGTTATGCACAACATTTTTTTTGTCATTACACACCCATAAGTTTATTTTTGTCTAACCATTGTGTATGAAACAGGCTGGTTCATTTCTTGCTTCCCGAGGGTTTTCCACCTCAATTTTGACTCCTGAATCAAGCAATGCTGCATTAGAAGAGCGCAAGATAGGTTGCAATATTTTTCCTCATTTTGATTCATAAGATTGTAGTATTAGGTTATACTTCATCATGTCAAGAAGAATTGATGTATAGATCTCTTTTTTGGTTAATAATTTATGTTGCATCATTAGGACTTCTTCAGGACCTGATGATTCCTGTGACGAACTTTCAAAATGAAGACAAAGGTTTCATGGTCTTGGCTGGAGATGTTTTTGATGTTCCTATTAGGAAGGACATCATTCATCGGGTAGTTAGATGGCAGCTTGCAAAGAGACAGCAGGTATCGGACGTTGCATCTTCATACTCTACGACATAAGACTAGACAAATGATTTAATAGAATCTCTATCGTCTCTATTGAAGGATTTATTTTTCTTTATAAGTATCTGTTTTTGTGTCTTTCTATTAAATTGATGAATATTTTCTTAATTATTTGCAACAGAGGGTACTATTATAAGGATTAGCCACATAGTGACTTTCAAACTTGCATTTTTATTAAAATCATTTTAATATACATGTACAACCAATCCCCTCACCCCCAAATGTTATTGAACACTCCTTGGAACCCTTTCATAATTTTATCAACATATAGGCCCTTGCATTGGAATAAATGGTTTCTTGAATCCGGAAAGTTTTGTTATTCAATTATGTTGCAATCCTCATATCAATATGTGTAGAAGGTAGTTAATCTATTATATTAAGTGTAATATATGGTTAGAAGGTAGTGTGCATGGAAGTTGTGGGTAAGTTTTTAAAAGTGGTTATTAGCTACTAAGCATCATGAGTGATAACAGGGAACACATTCGACAAAAACTATCAGTGAAGTTAGTGGAACTGGCAGAAAGCCATGGCGGCAAAAGGGTACTGGTAGAGCAAGGCATGGAACACTGCGTGGTCCCCAGGTAGCCAACAATTTTCTTTGAGTTATGATATTAATATTGTGGTAAATATCAGACATTAGTTGTTAATGAACTGGGTGATGATTATAGTTCAGAGGTGGTGCAGCTATGCATGGTCCTAAACCACGGAGTCATGCTTTCAAGCTTAACAAGAAAGTTCGTCGCTTGGGTTTGATGATTGCTCTTTCAGCTCGTGCTGCAGAAGGAAAGGCAGGTCTTTCTTGCTTGCAATCGTTTTATTAGTGGGTTTATTCTTGATGAAAGCTGAAAATGTGGGATGTATTATTTTCTACATGCTTTGGCCCATATGCACGCTCTAACACCTCTAACCCTTTTTTTAAACTCTTTCAGCTTCTGATATTTGATAATTTGGACGTCCCTACACATAAGACGAAGAATATCGTGAACTATGTCAATGAAATGGAGAATACTAAAAAAGTACTTCTAGTTGATGGAGGGCCCATAGATGAGAAGCTGAAGTTGGCCACACAAAACCTTCATTACGTCAATGTTTTGCCTTCCGTAGTAAGTCGTTCGACTGCTTCTTTTTTTTGTTTTTTATTTTATAAATTAATTTGCATTGAAGTTGCTTATCAAACCCCCTGGCCCTAGCATATGTGTCTTTTATTATTCAGCTTTGTATGTTGTAAACTTGTAAATCAAGATCTCCATCCCACTTCTCTCTGATAAAATCAAAGTTCAAGAGATTCTTAAAATTCTAGCTGTTCATGTAGGCATTCTTGATCTTTCTCGAGAATCTCCCACTTGGTGTTAAATTTTTCTGGGTAGAAAACAATTTCGTTTTTGTACAGTCTTATTAGTTTCTAATTTCTAATTTCATGACTAGACGATCTCCTTGTTTCTTCTCACTTGCACTGTTACCCCAAACATATTAGATTTCATGGAGATGCGTATTTTGCTAAGATGGTCATATTATTATTGACTACCATCAAAATTTATTGATTTAATCCAATGTCTTGATTCTTGACTTTTTCCATAATTTTATTGTATAGGGTTTGAACGTTTACAGCATTCTTCTACACGATACTCTTGTGATGTCTCGTGATGCCGTAGAAAGAATTGTTACCCGGATGCACACTCCGATCAATCGCTGAAGGCGCAGTGCAATACACCTGAATTATATGTTCAACTTCAGTTTTAGCTCAGAGCACAGCAACCTTTATTGGTATTTCCCCCCTTTTATTGCAGAAAGGGGAGAAAACCTGTATGTTGTTTCCGTTAAAATATTGATTACACTCGAGTATGGAATTTCCCTTGTACCGACTGATTAGTACTCAAACGCATTGGATAGTAAGTTTTGTAGCTGTAGTTTGTGGTGCTCGAAAACAACAATAAGAACAATTTTTCTGGCAG

mRNA sequence

CTCCATCAAGCCCGGCCCGTCAATGCCCTTTTCACTTCGTCTCCCTCGCAAAGCTCTGTGCTTTTCTCATTCTCATAACCTGCAAAGCAAGCTCGTCCTGTTCGGCTCGGAGTCTGCTGATCTTCCATTCTCATCCTCTACGCTCGATTCAGATGAATTGGTAGCTGTCTGATTGTTGCAATACTCTTTTAGTGGTCTGCTGTAATTATGGCTATCTCAATGTCGAGAAGGCTGTTGCGCTCTATGGGATCGTTGTCAACACTTGGGAAATGCAATTCTGCGTGTACTGTCAATCAGTCATTTTATAATTTCCATGAAATTTATGGCCGAATTAATGGGAGTAGCTCTATGTTTACGGGCTATTCTACCCTTTTGAAGGCTGGTTCATTTCTTGCTTCCCGAGGGTTTTCCACCTCAATTTTGACTCCTGAATCAAGCAATGCTGCATTAGAAGAGCGCAAGATAGGACTTCTTCAGGACCTGATGATTCCTGTGACGAACTTTCAAAATGAAGACAAAGGTTTCATGGTCTTGGCTGGAGATGTTTTTGATGTTCCTATTAGGAAGGACATCATTCATCGGGTAGTTAGATGGCAGCTTGCAAAGAGACAGCAGGGAACACATTCGACAAAAACTATCAGTGAAGTTAGTGGAACTGGCAGAAAGCCATGGCGGCAAAAGGGTACTGGTAGAGCAAGGCATGGAACACTGCGTGGTCCCCAGTTCAGAGGTGGTGCAGCTATGCATGGTCCTAAACCACGGAGTCATGCTTTCAAGCTTAACAAGAAAGTTCGTCGCTTGGGTTTGATGATTGCTCTTTCAGCTCGTGCTGCAGAAGGAAAGCTTCTGATATTTGATAATTTGGACGTCCCTACACATAAGACGAAGAATATCGTGAACTATGTCAATGAAATGGAGAATACTAAAAAAGTACTTCTAGTTGATGGAGGGCCCATAGATGAGAAGCTGAAGTTGGCCACACAAAACCTTCATTACGTCAATGTTTTGCCTTCCGTAGGTTTGAACGTTTACAGCATTCTTCTACACGATACTCTTGTGATGTCTCGTGATGCCGTAGAAAGAATTGTTACCCGGATGCACACTCCGATCAATCGCTGAAGGCGCAGTGCAATACACCTGAATTATATGTTCAACTTCAGTTTTAGCTCAGAGCACAGCAACCTTTATTGGTATTTCCCCCCTTTTATTGCAGAAAGGGGAGAAAACCTGTATGTTGTTTCCGTTAAAATATTGATTACACTCGAGTATGGAATTTCCCTTGTACCGACTGATTAGTACTCAAACGCATTGGATAGTAAGTTTTGTAGCTGTAGTTTGTGGTGCTCGAAAACAACAATAAGAACAATTTTTCTGGCAG

Coding sequence (CDS)

ATGGCTATCTCAATGTCGAGAAGGCTGTTGCGCTCTATGGGATCGTTGTCAACACTTGGGAAATGCAATTCTGCGTGTACTGTCAATCAGTCATTTTATAATTTCCATGAAATTTATGGCCGAATTAATGGGAGTAGCTCTATGTTTACGGGCTATTCTACCCTTTTGAAGGCTGGTTCATTTCTTGCTTCCCGAGGGTTTTCCACCTCAATTTTGACTCCTGAATCAAGCAATGCTGCATTAGAAGAGCGCAAGATAGGACTTCTTCAGGACCTGATGATTCCTGTGACGAACTTTCAAAATGAAGACAAAGGTTTCATGGTCTTGGCTGGAGATGTTTTTGATGTTCCTATTAGGAAGGACATCATTCATCGGGTAGTTAGATGGCAGCTTGCAAAGAGACAGCAGGGAACACATTCGACAAAAACTATCAGTGAAGTTAGTGGAACTGGCAGAAAGCCATGGCGGCAAAAGGGTACTGGTAGAGCAAGGCATGGAACACTGCGTGGTCCCCAGTTCAGAGGTGGTGCAGCTATGCATGGTCCTAAACCACGGAGTCATGCTTTCAAGCTTAACAAGAAAGTTCGTCGCTTGGGTTTGATGATTGCTCTTTCAGCTCGTGCTGCAGAAGGAAAGCTTCTGATATTTGATAATTTGGACGTCCCTACACATAAGACGAAGAATATCGTGAACTATGTCAATGAAATGGAGAATACTAAAAAAGTACTTCTAGTTGATGGAGGGCCCATAGATGAGAAGCTGAAGTTGGCCACACAAAACCTTCATTACGTCAATGTTTTGCCTTCCGTAGGTTTGAACGTTTACAGCATTCTTCTACACGATACTCTTGTGATGTCTCGTGATGCCGTAGAAAGAATTGTTACCCGGATGCACACTCCGATCAATCGCTGA

Protein sequence

MAISMSRRLLRSMGSLSTLGKCNSACTVNQSFYNFHEIYGRINGSSSMFTGYSTLLKAGSFLASRGFSTSILTPESSNAALEERKIGLLQDLMIPVTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWRQKGTGRARHGTLRGPQFRGGAAMHGPKPRSHAFKLNKKVRRLGLMIALSARAAEGKLLIFDNLDVPTHKTKNIVNYVNEMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSVGLNVYSILLHDTLVMSRDAVERIVTRMHTPINR

Homology

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BLAST of Sed0027185 vs. NCBI nr
Match: XP_022978853.1 (uncharacterized protein LOC111478684 [Cucurbita maxima] >XP_022978854.1 uncharacterized protein LOC111478684 [Cucurbita maxima] >XP_022978855.1 uncharacterized protein LOC111478684 [Cucurbita maxima])

HSP 1 Score: 538.5 bits (1386), Expect = 3.7e-149
Identity = 277/306 (90.52%), Postives = 289/306 (94.44%), Query Frame = 0


Query: 1   MAISMSRRLLRSMGSLSTLGKCNSACTVNQSFYNFHEIYGRINGSSSMFTGYSTLLKAGS 60
           MAIS+SRRLLRS+GSLST G+CNS+CT++QSFYN  EIYG + GSSSMF G STLLKAG+
Sbjct: 1   MAISVSRRLLRSLGSLSTFGQCNSSCTMSQSFYNSREIYGHVKGSSSMFAGCSTLLKAGT 60

Query: 61  FLASRGFSTSILTPESSNA---ALEERKIGLLQDLMIPVTNFQNEDKGFMVLAGDVFDVP 120
           FL S+G STSILTPESSNA     EERKIGLLQDLMIPVTNFQNEDKGFMVLAGDVFDVP
Sbjct: 61  FLVSKGLSTSILTPESSNAKPVVSEERKIGLLQDLMIPVTNFQNEDKGFMVLAGDVFDVP 120

Query: 121 IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWRQKGTGRARHGTLRGPQFRGGA 180
           IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWRQKGTGRARHGTLRGPQFRGGA
Sbjct: 121 IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWRQKGTGRARHGTLRGPQFRGGA 180

Query: 181 AMHGPKPRSHAFKLNKKVRRLGLMIALSARAAEGKLLIFDNLDVPTHKTKNIVNYVNEME 240
           AMHGPKPRSHAFKLNKKVRRLGL IAL+ARAAEGKLLIFDNLDV THKTK IVNYVNEME
Sbjct: 181 AMHGPKPRSHAFKLNKKVRRLGLKIALTARAAEGKLLIFDNLDVATHKTKYIVNYVNEME 240

Query: 241 NTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSVGLNVYSILLHDTLVMSRDAVERIVTRM 300
           NTKKVLLVDGGPIDEKLKLATQNLHYVNVLPS+GLNVYSILLHDTLVMSRDAVE+IVTRM
Sbjct: 241 NTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRDAVEKIVTRM 300

Query: 301 HTPINR 304
           HTPINR
Sbjct: 301 HTPINR 306

[Close]

BLAST of Sed0027185 vs. NCBI nr
Match: XP_038881662.1 (50S ribosomal protein L4 [Benincasa hispida] >XP_038881663.1 50S ribosomal protein L4 [Benincasa hispida])

HSP 1 Score: 538.5 bits (1386), Expect = 3.7e-149
Identity = 280/315 (88.89%), Postives = 290/315 (92.06%), Query Frame = 0


Query: 1   MAISMSRRLLRSMGSLSTLGKCNSACTVNQSFYNFHEIYGRINGSSSMFTGYSTLLKAGS 60
           MAIS+SRRLLRSM SLST G+CNS CT++QSFYN HEIYGR+NGSSS+F G STLLKAGS
Sbjct: 1   MAISVSRRLLRSMESLSTFGQCNSLCTMSQSFYNSHEIYGRVNGSSSVFAGCSTLLKAGS 60

Query: 61  FLASRGFSTSILTPESSNAA------------LEERKIGLLQDLMIPVTNFQNEDKGFMV 120
           FLASRGF +SILTPESSNAA            LEERKIGLLQDLMIPVTNFQNEDKGFMV
Sbjct: 61  FLASRGFCSSILTPESSNAAFPSHLLSAKPVVLEERKIGLLQDLMIPVTNFQNEDKGFMV 120

Query: 121 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWRQKGTGRARHGTL 180
           LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPW QKGTGRARHGTL
Sbjct: 121 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWNQKGTGRARHGTL 180

Query: 181 RGPQFRGGAAMHGPKPRSHAFKLNKKVRRLGLMIALSARAAEGKLLIFDNLDVPTHKTKN 240
           RGPQFRGGAAMHGPKPRSHAFKLNKKVRRLGL IALSARAAEGKLLIFDNLDV THKTKN
Sbjct: 181 RGPQFRGGAAMHGPKPRSHAFKLNKKVRRLGLKIALSARAAEGKLLIFDNLDVTTHKTKN 240

Query: 241 IVNYVNEMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSVGLNVYSILLHDTLVMSRD 300
           IV YVN MENTKK+LLVDGGPIDEKLKLATQNLHYVNVLPS+GLNVY ILLHDTLVMSRD
Sbjct: 241 IVKYVNGMENTKKLLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYDILLHDTLVMSRD 300

Query: 301 AVERIVTRMHTPINR 304
           AVERIVTRMHTPI+R
Sbjct: 301 AVERIVTRMHTPISR 315

[Close]

BLAST of Sed0027185 vs. NCBI nr
Match: XP_022132909.1 (uncharacterized protein LOC111005636 isoform X1 [Momordica charantia])

HSP 1 Score: 537.7 bits (1384), Expect = 6.3e-149
Identity = 275/315 (87.30%), Postives = 287/315 (91.11%), Query Frame = 0


Query: 1   MAISMSRRLLRSMGSLSTLGKCNSACTVNQSFYNFHEIYGRINGSSSMFTGYSTLLKAGS 60
           MAI++SRRLLRS+GS  T G+CNS+C +NQS YN HEIYGR+NG SSMF GYSTLLKAG 
Sbjct: 1   MAIAVSRRLLRSLGSFPTFGQCNSSCIMNQSLYNSHEIYGRVNGGSSMFAGYSTLLKAGC 60

Query: 61  FLASRGFSTSILTPESSNAA------------LEERKIGLLQDLMIPVTNFQNEDKGFMV 120
           F AS+G STSILTPESS AA            LEERKIGLLQDLMIPVTNFQNEDKGFMV
Sbjct: 61  FFASQGLSTSILTPESSKAAFPSDLLSATPVELEERKIGLLQDLMIPVTNFQNEDKGFMV 120

Query: 121 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWRQKGTGRARHGTL 180
           LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWRQKGTGRARHGTL
Sbjct: 121 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWRQKGTGRARHGTL 180

Query: 181 RGPQFRGGAAMHGPKPRSHAFKLNKKVRRLGLMIALSARAAEGKLLIFDNLDVPTHKTKN 240
           RGPQFRGGAAMHGPKPRSHAFKLNKKVRRLGL IALSARAAEGKLL+FDNLDVPTHKTKN
Sbjct: 181 RGPQFRGGAAMHGPKPRSHAFKLNKKVRRLGLKIALSARAAEGKLLVFDNLDVPTHKTKN 240

Query: 241 IVNYVNEMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSVGLNVYSILLHDTLVMSRD 300
           IVNY NEME  KK+LLVDGGPIDEKLKLATQNLHYVNVLPS+GLNVYSILLHDTLVMSRD
Sbjct: 241 IVNYFNEMEKAKKLLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRD 300

Query: 301 AVERIVTRMHTPINR 304
           A+ERIVTRMHTPINR
Sbjct: 301 AIERIVTRMHTPINR 315

[Close]

BLAST of Sed0027185 vs. NCBI nr
Match: XP_022950857.1 (uncharacterized protein LOC111453831 [Cucurbita moschata] >XP_022950858.1 uncharacterized protein LOC111453831 [Cucurbita moschata] >XP_022950859.1 uncharacterized protein LOC111453831 [Cucurbita moschata] >KAG6603796.1 hypothetical protein SDJN03_04405, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 537.0 bits (1382), Expect = 1.1e-148
Identity = 276/306 (90.20%), Postives = 288/306 (94.12%), Query Frame = 0


Query: 1   MAISMSRRLLRSMGSLSTLGKCNSACTVNQSFYNFHEIYGRINGSSSMFTGYSTLLKAGS 60
           MAIS+SRRLLRS+GSLST G+CNS+CT++QSFYN  EIYG + GSSSMF G STLLKAG+
Sbjct: 1   MAISVSRRLLRSLGSLSTFGQCNSSCTMSQSFYNSREIYGHVKGSSSMFAGCSTLLKAGT 60

Query: 61  FLASRGFSTSILTPESSNA---ALEERKIGLLQDLMIPVTNFQNEDKGFMVLAGDVFDVP 120
           FL S+G STSILTPESSNA     EERKIGLLQDLMIPVTNFQNEDKGFMVLAGDVFDVP
Sbjct: 61  FLVSKGLSTSILTPESSNAKPVVSEERKIGLLQDLMIPVTNFQNEDKGFMVLAGDVFDVP 120

Query: 121 IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWRQKGTGRARHGTLRGPQFRGGA 180
           IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWRQKGTGRARHGTLRGPQFRGGA
Sbjct: 121 IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWRQKGTGRARHGTLRGPQFRGGA 180

Query: 181 AMHGPKPRSHAFKLNKKVRRLGLMIALSARAAEGKLLIFDNLDVPTHKTKNIVNYVNEME 240
            MHGPKPRSHAFKLNKKVRRLGL IAL+ARAAEGKLLIFDNLDV THKTK +VNYVNEME
Sbjct: 181 VMHGPKPRSHAFKLNKKVRRLGLKIALTARAAEGKLLIFDNLDVATHKTKYMVNYVNEME 240

Query: 241 NTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSVGLNVYSILLHDTLVMSRDAVERIVTRM 300
           NTKKVLLVDGGPIDEKLKLATQNLHYVNVLPS+GLNVYSILLHDTLVMSRDAVERIVTRM
Sbjct: 241 NTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRDAVERIVTRM 300

Query: 301 HTPINR 304
           HTPINR
Sbjct: 301 HTPINR 306

[Close]

BLAST of Sed0027185 vs. NCBI nr
Match: XP_023545190.1 (uncharacterized protein LOC111804568 [Cucurbita pepo subsp. pepo] >XP_023545191.1 uncharacterized protein LOC111804568 [Cucurbita pepo subsp. pepo] >XP_023545192.1 uncharacterized protein LOC111804568 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 532.3 bits (1370), Expect = 2.7e-147
Identity = 276/307 (89.90%), Postives = 288/307 (93.81%), Query Frame = 0


Query: 1   MAISMSRRLLRSMGSLSTLGKCNSACTVNQSFYNFHEIYGRING-SSSMFTGYSTLLKAG 60
           MAIS+SRRLLRS+GSLST G+CNS+CT++QSFYN  EIYG + G SSSMF G STLLKAG
Sbjct: 1   MAISVSRRLLRSLGSLSTFGQCNSSCTMSQSFYNSREIYGHVKGRSSSMFAGCSTLLKAG 60

Query: 61  SFLASRGFSTSILTPESSNA---ALEERKIGLLQDLMIPVTNFQNEDKGFMVLAGDVFDV 120
           +FL S+G STSILTPESSNA     EERKIGLLQDLMIPVTNFQNEDKGFMVLAGDVFDV
Sbjct: 61  TFLVSKGLSTSILTPESSNAKPVVSEERKIGLLQDLMIPVTNFQNEDKGFMVLAGDVFDV 120

Query: 121 PIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWRQKGTGRARHGTLRGPQFRGG 180
           PIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWRQKGTGRARHGTLRGPQFRGG
Sbjct: 121 PIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWRQKGTGRARHGTLRGPQFRGG 180

Query: 181 AAMHGPKPRSHAFKLNKKVRRLGLMIALSARAAEGKLLIFDNLDVPTHKTKNIVNYVNEM 240
           A MHGPKPRSHAFKLNKKVRRLGL IAL+ARAAEGKLLIFDNLDV THKTK +VNYVNEM
Sbjct: 181 AVMHGPKPRSHAFKLNKKVRRLGLKIALTARAAEGKLLIFDNLDVATHKTKYMVNYVNEM 240

Query: 241 ENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSVGLNVYSILLHDTLVMSRDAVERIVTR 300
           ENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPS+GLNVYSILLHDTLVMSRDAVERIVTR
Sbjct: 241 ENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRDAVERIVTR 300

Query: 301 MHTPINR 304
           MHTPINR
Sbjct: 301 MHTPINR 307

[Close]

BLAST of Sed0027185 vs. ExPASy Swiss-Prot
Match: B6IRQ7 (50S ribosomal protein L4 OS=Rhodospirillum centenum (strain ATCC 51521 / SW) OX=414684 GN=rplD PE=3 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 4.1e-50
Identity = 104/202 (51.49%), Postives = 137/202 (67.82%), Query Frame = 0


Query: 96  VTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPW 155
           V N  NE  G + LA +VF +P R+DI+ R+V WQLAKR+QGTH TK ISE++GT +KPW
Sbjct: 5   VKNLNNETVGEIELADEVFGLPTRQDILTRMVLWQLAKRRQGTHKTKGISEIAGTTKKPW 64

Query: 156 RQKGTGRARHGTLRGPQFRGGAAMHGPKPRSHAFKLNKKVRRLGLMIALSARAAEGKLLI 215
           RQKGTGRAR G+ R PQFRGGA + GP  RSH   L KKVR+L L  ALS +AAEGKL +
Sbjct: 65  RQKGTGRARQGSTRSPQFRGGARIFGPVVRSHEHDLTKKVRKLALKTALSTKAAEGKLFV 124

Query: 216 FDNLDVPTHKTKNIVNYVNEMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSVGLNVY 275
            +     THKTK +   +  +  T   L++DG  +DE    A +N+ +++VLP  G NVY
Sbjct: 125 LEAAKADTHKTKALAAQLKTLGLT-SALIIDGANLDETFVRAARNIPHLDVLPEQGANVY 184

Query: 276 SILLHDTLVMSRDAVERIVTRM 298
            IL  D LV++R+AVE++  R+
Sbjct: 185 DILRRDVLVLTRNAVEQLEARL 205

[Close]

BLAST of Sed0027185 vs. ExPASy Swiss-Prot
Match: Q2RQW1 (50S ribosomal protein L4 OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIMB 8255 / S1) OX=269796 GN=rplD PE=3 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 1.7e-48
Identity = 100/202 (49.50%), Postives = 140/202 (69.31%), Query Frame = 0


Query: 96  VTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPW 155
           V     +D G + L+  VF +P+R D++HR+VRWQLA+RQ GTH TK ISE+SGT  KP+
Sbjct: 5   VKTLDGKDAGSIELSDSVFGLPVRTDLLHRMVRWQLARRQAGTHKTKGISEISGTTAKPF 64

Query: 156 RQKGTGRARHGTLRGPQFRGGAAMHGPKPRSHAFKLNKKVRRLGLMIALSARAAEGKLLI 215
           +QKGTG AR G+ R PQFRGGA + GP  RSHA  LNKKVR+LGL  ALSA+A  G+L++
Sbjct: 65  KQKGTGHARQGSKRSPQFRGGATIFGPVVRSHAHDLNKKVRKLGLKTALSAKAQAGQLIV 124

Query: 216 FDNLDVPTHKTKNIVNYVNEMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSVGLNVY 275
            D     + KTK+++  +  +   +KVL +DG  ++EK  LA +N+  ++VLP  G NVY
Sbjct: 125 LDQAISESGKTKDLLAQLKVL-GLEKVLFIDGPEVNEKFALAARNIIGLDVLPQQGANVY 184

Query: 276 SILLHDTLVMSRDAVERIVTRM 298
            IL  DTLV++++AV+ +  R+
Sbjct: 185 DILRRDTLVLTKEAVKHLEERL 205

[Close]

BLAST of Sed0027185 vs. ExPASy Swiss-Prot
Match: Q2W2J2 (50S ribosomal protein L4 OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) OX=342108 GN=rplD PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 8.6e-48
Identity = 100/202 (49.50%), Postives = 136/202 (67.33%), Query Frame = 0


Query: 96  VTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPW 155
           V +  N+  G + LA ++F VP+R DI+ R V WQLAKRQ G H TKTISE+SGT +KP+
Sbjct: 5   VISLDNQTVGEIELADEIFGVPVRGDILFRAVNWQLAKRQSGNHKTKTISEISGTTKKPF 64

Query: 156 RQKGTGRARHGTLRGPQFRGGAAMHGPKPRSHAFKLNKKVRRLGLMIALSARAAEGKLLI 215
            QKG GRAR G+LR  QFRGG+ + GP  RSHA  L KKVR+L L  ALSA+ A+GKL++
Sbjct: 65  AQKGGGRARQGSLRSAQFRGGSTIFGPVVRSHAHDLPKKVRKLALKTALSAKVADGKLIV 124

Query: 216 FDNLDVPTHKTKNIVNYVNEMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSVGLNVY 275
            D     + KTK++   + ++     VL +DG  +D    LA++N+ YV+VLP+ G NVY
Sbjct: 125 VDAASAGSPKTKDLAARLGKL-GLSSVLFIDGAAVDGNFALASRNIPYVDVLPTQGANVY 184

Query: 276 SILLHDTLVMSRDAVERIVTRM 298
            IL  DTLV+++DAV  +  R+
Sbjct: 185 DILRRDTLVLTKDAVAALEARL 205

[Close]

BLAST of Sed0027185 vs. ExPASy Swiss-Prot
Match: A8GVB5 (50S ribosomal protein L4 OS=Rickettsia bellii (strain OSU 85-389) OX=391896 GN=rplD PE=3 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 5.6e-47
Identity = 100/203 (49.26%), Postives = 138/203 (67.98%), Query Frame = 0


Query: 96  VTNFQNEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKP 155
           + N  NE+ G + L  D+F V  IR DII +VV WQ AK   GTH TKT+SEVSGT +KP
Sbjct: 5   ILNLANEEIGEISLNEDIFAVEFIRDDIIKQVVDWQRAKAMAGTHKTKTVSEVSGTTKKP 64

Query: 156 WRQKGTGRARHGTLRGPQFRGGAAMHGPKPRSHAFKLNKKVRRLGLMIALSARAAEGKLL 215
           ++QKGTG AR G+LR  Q RGG  +HGP  RSHA KL KKVR+LGL+ ALS + +EGKLL
Sbjct: 65  FKQKGTGNARQGSLRSVQMRGGGVIHGPVVRSHATKLPKKVRKLGLIHALSEKFSEGKLL 124

Query: 216 IFDNLDVPTHKTKNIVNYVNEMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSVGLNV 275
           + D+L + T KT N+VN +N+ +  K   ++DG  +D    LA QN++   V+P +G NV
Sbjct: 125 VIDSLKLETPKTSNLVNILNKFQG-KSFFVIDGNEVDVNFSLAAQNIYNTVVVPQIGANV 184

Query: 276 YSILLHDTLVMSRDAVERIVTRM 298
           Y I+ H+ +++S++AV  +  R+
Sbjct: 185 YDIIRHEYVLLSQEAVNVLEERL 206

[Close]

BLAST of Sed0027185 vs. ExPASy Swiss-Prot
Match: Q1RHM2 (50S ribosomal protein L4 OS=Rickettsia bellii (strain RML369-C) OX=336407 GN=rplD PE=3 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 5.6e-47
Identity = 100/203 (49.26%), Postives = 138/203 (67.98%), Query Frame = 0


Query: 96  VTNFQNEDKGFMVLAGDVFDVP-IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKP 155
           + N  NE+ G + L  D+F V  IR DII +VV WQ AK   GTH TKT+SEVSGT +KP
Sbjct: 5   ILNLANEEIGEISLNEDIFAVEFIRDDIIKQVVDWQRAKAMAGTHKTKTVSEVSGTTKKP 64

Query: 156 WRQKGTGRARHGTLRGPQFRGGAAMHGPKPRSHAFKLNKKVRRLGLMIALSARAAEGKLL 215
           ++QKGTG AR G+LR  Q RGG  +HGP  RSHA KL KKVR+LGL+ ALS + +EGKLL
Sbjct: 65  FKQKGTGNARQGSLRSVQMRGGGVIHGPVVRSHATKLPKKVRKLGLIHALSEKFSEGKLL 124

Query: 216 IFDNLDVPTHKTKNIVNYVNEMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSVGLNV 275
           + D+L + T KT N+VN +N+ +  K   ++DG  +D    LA QN++   V+P +G NV
Sbjct: 125 VIDSLKLETPKTSNLVNILNKFQG-KSFFVIDGNEVDVNFSLAAQNIYNTVVVPQIGANV 184

Query: 276 YSILLHDTLVMSRDAVERIVTRM 298
           Y I+ H+ +++S++AV  +  R+
Sbjct: 185 YDIIRHEYVLLSQEAVNVLEERL 206

[Close]

BLAST of Sed0027185 vs. ExPASy TrEMBL
Match: A0A6J1IUG2 (uncharacterized protein LOC111478684 OS=Cucurbita maxima OX=3661 GN=LOC111478684 PE=3 SV=1)

HSP 1 Score: 538.5 bits (1386), Expect = 1.8e-149
Identity = 277/306 (90.52%), Postives = 289/306 (94.44%), Query Frame = 0


Query: 1   MAISMSRRLLRSMGSLSTLGKCNSACTVNQSFYNFHEIYGRINGSSSMFTGYSTLLKAGS 60
           MAIS+SRRLLRS+GSLST G+CNS+CT++QSFYN  EIYG + GSSSMF G STLLKAG+
Sbjct: 1   MAISVSRRLLRSLGSLSTFGQCNSSCTMSQSFYNSREIYGHVKGSSSMFAGCSTLLKAGT 60

Query: 61  FLASRGFSTSILTPESSNA---ALEERKIGLLQDLMIPVTNFQNEDKGFMVLAGDVFDVP 120
           FL S+G STSILTPESSNA     EERKIGLLQDLMIPVTNFQNEDKGFMVLAGDVFDVP
Sbjct: 61  FLVSKGLSTSILTPESSNAKPVVSEERKIGLLQDLMIPVTNFQNEDKGFMVLAGDVFDVP 120

Query: 121 IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWRQKGTGRARHGTLRGPQFRGGA 180
           IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWRQKGTGRARHGTLRGPQFRGGA
Sbjct: 121 IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWRQKGTGRARHGTLRGPQFRGGA 180

Query: 181 AMHGPKPRSHAFKLNKKVRRLGLMIALSARAAEGKLLIFDNLDVPTHKTKNIVNYVNEME 240
           AMHGPKPRSHAFKLNKKVRRLGL IAL+ARAAEGKLLIFDNLDV THKTK IVNYVNEME
Sbjct: 181 AMHGPKPRSHAFKLNKKVRRLGLKIALTARAAEGKLLIFDNLDVATHKTKYIVNYVNEME 240

Query: 241 NTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSVGLNVYSILLHDTLVMSRDAVERIVTRM 300
           NTKKVLLVDGGPIDEKLKLATQNLHYVNVLPS+GLNVYSILLHDTLVMSRDAVE+IVTRM
Sbjct: 241 NTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRDAVEKIVTRM 300

Query: 301 HTPINR 304
           HTPINR
Sbjct: 301 HTPINR 306

[Close]

BLAST of Sed0027185 vs. ExPASy TrEMBL
Match: A0A6J1BUE8 (uncharacterized protein LOC111005636 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111005636 PE=3 SV=1)

HSP 1 Score: 537.7 bits (1384), Expect = 3.1e-149
Identity = 275/315 (87.30%), Postives = 287/315 (91.11%), Query Frame = 0


Query: 1   MAISMSRRLLRSMGSLSTLGKCNSACTVNQSFYNFHEIYGRINGSSSMFTGYSTLLKAGS 60
           MAI++SRRLLRS+GS  T G+CNS+C +NQS YN HEIYGR+NG SSMF GYSTLLKAG 
Sbjct: 1   MAIAVSRRLLRSLGSFPTFGQCNSSCIMNQSLYNSHEIYGRVNGGSSMFAGYSTLLKAGC 60

Query: 61  FLASRGFSTSILTPESSNAA------------LEERKIGLLQDLMIPVTNFQNEDKGFMV 120
           F AS+G STSILTPESS AA            LEERKIGLLQDLMIPVTNFQNEDKGFMV
Sbjct: 61  FFASQGLSTSILTPESSKAAFPSDLLSATPVELEERKIGLLQDLMIPVTNFQNEDKGFMV 120

Query: 121 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWRQKGTGRARHGTL 180
           LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWRQKGTGRARHGTL
Sbjct: 121 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWRQKGTGRARHGTL 180

Query: 181 RGPQFRGGAAMHGPKPRSHAFKLNKKVRRLGLMIALSARAAEGKLLIFDNLDVPTHKTKN 240
           RGPQFRGGAAMHGPKPRSHAFKLNKKVRRLGL IALSARAAEGKLL+FDNLDVPTHKTKN
Sbjct: 181 RGPQFRGGAAMHGPKPRSHAFKLNKKVRRLGLKIALSARAAEGKLLVFDNLDVPTHKTKN 240

Query: 241 IVNYVNEMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSVGLNVYSILLHDTLVMSRD 300
           IVNY NEME  KK+LLVDGGPIDEKLKLATQNLHYVNVLPS+GLNVYSILLHDTLVMSRD
Sbjct: 241 IVNYFNEMEKAKKLLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRD 300

Query: 301 AVERIVTRMHTPINR 304
           A+ERIVTRMHTPINR
Sbjct: 301 AIERIVTRMHTPINR 315

[Close]

BLAST of Sed0027185 vs. ExPASy TrEMBL
Match: A0A6J1GH25 (uncharacterized protein LOC111453831 OS=Cucurbita moschata OX=3662 GN=LOC111453831 PE=3 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 5.2e-149
Identity = 276/306 (90.20%), Postives = 288/306 (94.12%), Query Frame = 0


Query: 1   MAISMSRRLLRSMGSLSTLGKCNSACTVNQSFYNFHEIYGRINGSSSMFTGYSTLLKAGS 60
           MAIS+SRRLLRS+GSLST G+CNS+CT++QSFYN  EIYG + GSSSMF G STLLKAG+
Sbjct: 1   MAISVSRRLLRSLGSLSTFGQCNSSCTMSQSFYNSREIYGHVKGSSSMFAGCSTLLKAGT 60

Query: 61  FLASRGFSTSILTPESSNA---ALEERKIGLLQDLMIPVTNFQNEDKGFMVLAGDVFDVP 120
           FL S+G STSILTPESSNA     EERKIGLLQDLMIPVTNFQNEDKGFMVLAGDVFDVP
Sbjct: 61  FLVSKGLSTSILTPESSNAKPVVSEERKIGLLQDLMIPVTNFQNEDKGFMVLAGDVFDVP 120

Query: 121 IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWRQKGTGRARHGTLRGPQFRGGA 180
           IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWRQKGTGRARHGTLRGPQFRGGA
Sbjct: 121 IRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWRQKGTGRARHGTLRGPQFRGGA 180

Query: 181 AMHGPKPRSHAFKLNKKVRRLGLMIALSARAAEGKLLIFDNLDVPTHKTKNIVNYVNEME 240
            MHGPKPRSHAFKLNKKVRRLGL IAL+ARAAEGKLLIFDNLDV THKTK +VNYVNEME
Sbjct: 181 VMHGPKPRSHAFKLNKKVRRLGLKIALTARAAEGKLLIFDNLDVATHKTKYMVNYVNEME 240

Query: 241 NTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSVGLNVYSILLHDTLVMSRDAVERIVTRM 300
           NTKKVLLVDGGPIDEKLKLATQNLHYVNVLPS+GLNVYSILLHDTLVMSRDAVERIVTRM
Sbjct: 241 NTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRDAVERIVTRM 300

Query: 301 HTPINR 304
           HTPINR
Sbjct: 301 HTPINR 306

[Close]

BLAST of Sed0027185 vs. ExPASy TrEMBL
Match: A0A0A0KH99 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513440 PE=3 SV=1)

HSP 1 Score: 523.9 bits (1348), Expect = 4.6e-145
Identity = 270/315 (85.71%), Postives = 287/315 (91.11%), Query Frame = 0


Query: 1   MAISMSRRLLRSMGSLSTLGKCNSACTVNQSFYNFHEIYGRINGSSSMFTGYSTLLKAGS 60
           MAIS+SRRLLRS+GSLST G+CNS+CT+++SF N HEIYG ++GSSS F   STLLKAGS
Sbjct: 1   MAISVSRRLLRSVGSLSTFGQCNSSCTMSRSFSNPHEIYGHVSGSSSTFASRSTLLKAGS 60

Query: 61  FLASRGFSTSILTPESSN------------AALEERKIGLLQDLMIPVTNFQNEDKGFMV 120
           FLASRGF TSILTPESSN             A EERKIGL QDLMIPVTNF+NEDKGFMV
Sbjct: 61  FLASRGFCTSILTPESSNNAFPSELLSAKPVASEERKIGLYQDLMIPVTNFENEDKGFMV 120

Query: 121 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWRQKGTGRARHGTL 180
           LAGDVFD+PIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPW+QKGTGRARHGTL
Sbjct: 121 LAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWKQKGTGRARHGTL 180

Query: 181 RGPQFRGGAAMHGPKPRSHAFKLNKKVRRLGLMIALSARAAEGKLLIFDNLDVPTHKTKN 240
           RGPQFRGGA MHGPKPRSHAFKLNKKVRRLGLMIALSAR AEGKLL+FDNLDV THKTKN
Sbjct: 181 RGPQFRGGATMHGPKPRSHAFKLNKKVRRLGLMIALSARVAEGKLLVFDNLDVTTHKTKN 240

Query: 241 IVNYVNEMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSVGLNVYSILLHDTLVMSRD 300
           +V YV++MENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPS+GLNVYSILLHDTLVMSRD
Sbjct: 241 MVKYVSKMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRD 300

Query: 301 AVERIVTRMHTPINR 304
           AVERIVTRMHTPINR
Sbjct: 301 AVERIVTRMHTPINR 315

[Close]

BLAST of Sed0027185 vs. ExPASy TrEMBL
Match: A0A6J1BTV3 (uncharacterized protein LOC111005636 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111005636 PE=3 SV=1)

HSP 1 Score: 522.3 bits (1344), Expect = 1.3e-144
Identity = 270/315 (85.71%), Postives = 281/315 (89.21%), Query Frame = 0


Query: 1   MAISMSRRLLRSMGSLSTLGKCNSACTVNQSFYNFHEIYGRINGSSSMFTGYSTLLKAGS 60
           MAI++SRRLLRS+GS  T G+CNS+C +NQS YN HEIYGR+NG SSMF GYSTLLK   
Sbjct: 1   MAIAVSRRLLRSLGSFPTFGQCNSSCIMNQSLYNSHEIYGRVNGGSSMFAGYSTLLK--- 60

Query: 61  FLASRGFSTSILTPESSNAA------------LEERKIGLLQDLMIPVTNFQNEDKGFMV 120
                G STSILTPESS AA            LEERKIGLLQDLMIPVTNFQNEDKGFMV
Sbjct: 61  -----GLSTSILTPESSKAAFPSDLLSATPVELEERKIGLLQDLMIPVTNFQNEDKGFMV 120

Query: 121 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWRQKGTGRARHGTL 180
           LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWRQKGTGRARHGTL
Sbjct: 121 LAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWRQKGTGRARHGTL 180

Query: 181 RGPQFRGGAAMHGPKPRSHAFKLNKKVRRLGLMIALSARAAEGKLLIFDNLDVPTHKTKN 240
           RGPQFRGGAAMHGPKPRSHAFKLNKKVRRLGL IALSARAAEGKLL+FDNLDVPTHKTKN
Sbjct: 181 RGPQFRGGAAMHGPKPRSHAFKLNKKVRRLGLKIALSARAAEGKLLVFDNLDVPTHKTKN 240

Query: 241 IVNYVNEMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSVGLNVYSILLHDTLVMSRD 300
           IVNY NEME  KK+LLVDGGPIDEKLKLATQNLHYVNVLPS+GLNVYSILLHDTLVMSRD
Sbjct: 241 IVNYFNEMEKAKKLLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSRD 300

Query: 301 AVERIVTRMHTPINR 304
           A+ERIVTRMHTPINR
Sbjct: 301 AIERIVTRMHTPINR 307

[Close]

BLAST of Sed0027185 vs. TAIR 10
Match: AT2G20060.1 (Ribosomal protein L4/L1 family )

HSP 1 Score: 412.5 bits (1059), Expect = 2.9e-115
Identity = 220/313 (70.29%), Postives = 249/313 (79.55%), Query Frame = 0


Query: 1   MAISMSRRLLRSMGSLSTLGKCNSACTVNQSFYNFHEIYGRINGSSSMFTGYSTLLKAG- 60
           MA S+SRR+ R+ GS S LG+ +S    N S           N S +     +  LK G 
Sbjct: 1   MAASISRRIFRTFGSFSALGRSSSP---NLS----------ANTSGNGLASLTNDLKYGM 60

Query: 61  SFLASRGFSTSILTPESS---------NAALEERKIGLLQDLMIPVTNFQNEDKGFMVLA 120
           + L++R  STSILTP+ S              +R IG  QDL+IPVTNFQNE+KGFMVLA
Sbjct: 61  ALLSNRKLSTSILTPDDSFPSDLLTKKTVLTPDRTIGQYQDLVIPVTNFQNEEKGFMVLA 120

Query: 121 GDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWRQKGTGRARHGTLRG 180
           GDVFDVPIRKDIIH VVRWQLAKRQQGTHSTKT+SEVSGTGRKPW QKGTGRARHGTLRG
Sbjct: 121 GDVFDVPIRKDIIHNVVRWQLAKRQQGTHSTKTLSEVSGTGRKPWNQKGTGRARHGTLRG 180

Query: 181 PQFRGGAAMHGPKPRSHAFKLNKKVRRLGLMIALSARAAEGKLLIFDNLDVPTHKTKNIV 240
           PQFRGG  MHGPKPRSHA K+NK+VRRLGL IAL+ARAAEGKLL+FD+L +PTHKTKNIV
Sbjct: 181 PQFRGGCVMHGPKPRSHAIKMNKQVRRLGLKIALTARAAEGKLLVFDDLGLPTHKTKNIV 240

Query: 241 NYVNEMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSVGLNVYSILLHDTLVMSRDAV 300
           NY N+MENTKKVL+V+GGPIDEKLKLATQNLHYVN++PS+GLNVYSILLHDTL+MSRDAV
Sbjct: 241 NYYNQMENTKKVLVVEGGPIDEKLKLATQNLHYVNIIPSIGLNVYSILLHDTLLMSRDAV 300

Query: 301 ERIVTRMHTPINR 304
            +IV RMHTPINR
Sbjct: 301 NKIVERMHTPINR 300

[Close]

BLAST of Sed0027185 vs. TAIR 10
Match: AT1G07320.1 (ribosomal protein L4 )

HSP 1 Score: 92.0 bits (227), Expect = 8.6e-19
Identity = 63/210 (30.00%), Postives = 108/210 (51.43%), Query Frame = 0


Query: 94  IPVTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRK 153
           +P+ +F+ E  G   L          + ++HR +   L  +++GT ST T  EV G G K
Sbjct: 54  LPILSFEGEKVGETYLDLKAAPEDTARAVVHRAIVTDLNNKRRGTASTLTRGEVRGGGIK 113

Query: 154 PWRQKGTGRARHGTLRGPQFRGGAAMHGPKPRSHAFKLNKKVRRLGLMIAL-SARAAEGK 213
           P+ QK TG AR G+ R P   GG  + GP+P+  + K+N+K ++L +  AL SA +AEG 
Sbjct: 114 PYSQKKTGHARRGSQRTPLRPGGGVVFGPRPKDWSIKINRKEKKLAISTALSSAASAEGG 173

Query: 214 LLIFDNLDVPTHKTKN------IVNYVNEMENTKKVLLVDGGPIDEKLKLATQNLHYVNV 273
            ++ +       K K       +  +  + +     L++D   +DE +  +++N+  + +
Sbjct: 174 AIVVEEFGEKFEKPKTKDFLAAMQRWGLDPKEKAMFLMID---VDENVAKSSRNIGTLRM 233

Query: 274 LPSVGLNVYSILLHDTLVMSRDAVERIVTR 297
           L    LN++ IL  D LV++  AVE +  R
Sbjct: 234 LTPRTLNLFDILNADKLVLTPAAVEFLNAR 260

[Close]

BLAST of Sed0027185 vs. TAIR 10
Match: AT1G07320.2 (ribosomal protein L4 )

HSP 1 Score: 92.0 bits (227), Expect = 8.6e-19
Identity = 63/210 (30.00%), Postives = 108/210 (51.43%), Query Frame = 0


Query: 94  IPVTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRK 153
           +P+ +F+ E  G   L          + ++HR +   L  +++GT ST T  EV G G K
Sbjct: 54  LPILSFEGEKVGETYLDLKAAPEDTARAVVHRAIVTDLNNKRRGTASTLTRGEVRGGGIK 113

Query: 154 PWRQKGTGRARHGTLRGPQFRGGAAMHGPKPRSHAFKLNKKVRRLGLMIAL-SARAAEGK 213
           P+ QK TG AR G+ R P   GG  + GP+P+  + K+N+K ++L +  AL SA +AEG 
Sbjct: 114 PYSQKKTGHARRGSQRTPLRPGGGVVFGPRPKDWSIKINRKEKKLAISTALSSAASAEGG 173

Query: 214 LLIFDNLDVPTHKTKN------IVNYVNEMENTKKVLLVDGGPIDEKLKLATQNLHYVNV 273
            ++ +       K K       +  +  + +     L++D   +DE +  +++N+  + +
Sbjct: 174 AIVVEEFGEKFEKPKTKDFLAAMQRWGLDPKEKAMFLMID---VDENVAKSSRNIGTLRM 233

Query: 274 LPSVGLNVYSILLHDTLVMSRDAVERIVTR 297
           L    LN++ IL  D LV++  AVE +  R
Sbjct: 234 LTPRTLNLFDILNADKLVLTPAAVEFLNAR 260

[Close]

BLAST of Sed0027185 vs. TAIR 10
Match: AT1G07320.3 (ribosomal protein L4 )

HSP 1 Score: 92.0 bits (227), Expect = 8.6e-19
Identity = 63/210 (30.00%), Postives = 108/210 (51.43%), Query Frame = 0


Query: 94  IPVTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRK 153
           +P+ +F+ E  G   L          + ++HR +   L  +++GT ST T  EV G G K
Sbjct: 54  LPILSFEGEKVGETYLDLKAAPEDTARAVVHRAIVTDLNNKRRGTASTLTRGEVRGGGIK 113

Query: 154 PWRQKGTGRARHGTLRGPQFRGGAAMHGPKPRSHAFKLNKKVRRLGLMIAL-SARAAEGK 213
           P+ QK TG AR G+ R P   GG  + GP+P+  + K+N+K ++L +  AL SA +AEG 
Sbjct: 114 PYSQKKTGHARRGSQRTPLRPGGGVVFGPRPKDWSIKINRKEKKLAISTALSSAASAEGG 173

Query: 214 LLIFDNLDVPTHKTKN------IVNYVNEMENTKKVLLVDGGPIDEKLKLATQNLHYVNV 273
            ++ +       K K       +  +  + +     L++D   +DE +  +++N+  + +
Sbjct: 174 AIVVEEFGEKFEKPKTKDFLAAMQRWGLDPKEKAMFLMID---VDENVAKSSRNIGTLRM 233

Query: 274 LPSVGLNVYSILLHDTLVMSRDAVERIVTR 297
           L    LN++ IL  D LV++  AVE +  R
Sbjct: 234 LTPRTLNLFDILNADKLVLTPAAVEFLNAR 260

[Close]

BLAST of Sed0027185 vs. TAIR 10
Match: AT1G07320.4 (ribosomal protein L4 )

HSP 1 Score: 92.0 bits (227), Expect = 8.6e-19
Identity = 63/210 (30.00%), Postives = 108/210 (51.43%), Query Frame = 0


Query: 94  IPVTNFQNEDKGFMVLAGDVFDVPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRK 153
           +P+ +F+ E  G   L          + ++HR +   L  +++GT ST T  EV G G K
Sbjct: 54  LPILSFEGEKVGETYLDLKAAPEDTARAVVHRAIVTDLNNKRRGTASTLTRGEVRGGGIK 113

Query: 154 PWRQKGTGRARHGTLRGPQFRGGAAMHGPKPRSHAFKLNKKVRRLGLMIAL-SARAAEGK 213
           P+ QK TG AR G+ R P   GG  + GP+P+  + K+N+K ++L +  AL SA +AEG 
Sbjct: 114 PYSQKKTGHARRGSQRTPLRPGGGVVFGPRPKDWSIKINRKEKKLAISTALSSAASAEGG 173

Query: 214 LLIFDNLDVPTHKTKN------IVNYVNEMENTKKVLLVDGGPIDEKLKLATQNLHYVNV 273
            ++ +       K K       +  +  + +     L++D   +DE +  +++N+  + +
Sbjct: 174 AIVVEEFGEKFEKPKTKDFLAAMQRWGLDPKEKAMFLMID---VDENVAKSSRNIGTLRM 233

Query: 274 LPSVGLNVYSILLHDTLVMSRDAVERIVTR 297
           L    LN++ IL  D LV++  AVE +  R
Sbjct: 234 LTPRTLNLFDILNADKLVLTPAAVEFLNAR 260

The following BLAST results are available for this feature:

BLAST of Sed0027185 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022978853.1	3.7e-149	90.52	uncharacterized protein LOC111478684 [Cucurbita maxima] >XP_022978854.1 uncharac...	[more]
XP_038881662.1	3.7e-149	88.89	50S ribosomal protein L4 [Benincasa hispida] >XP_038881663.1 50S ribosomal prote...	[more]
XP_022132909.1	6.3e-149	87.30	uncharacterized protein LOC111005636 isoform X1 [Momordica charantia]	[more]
XP_022950857.1	1.1e-148	90.20	uncharacterized protein LOC111453831 [Cucurbita moschata] >XP_022950858.1 unchar...	[more]
XP_023545190.1	2.7e-147	89.90	uncharacterized protein LOC111804568 [Cucurbita pepo subsp. pepo] >XP_023545191....	[more]

BLAST of Sed0027185 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B6IRQ7	4.1e-50	51.49	50S ribosomal protein L4 OS=Rhodospirillum centenum (strain ATCC 51521 / SW) OX=...	[more]
Q2RQW1	1.7e-48	49.50	50S ribosomal protein L4 OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1...	[more]
Q2W2J2	8.6e-48	49.50	50S ribosomal protein L4 OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700...	[more]
A8GVB5	5.6e-47	49.26	50S ribosomal protein L4 OS=Rickettsia bellii (strain OSU 85-389) OX=391896 GN=r...	[more]
Q1RHM2	5.6e-47	49.26	50S ribosomal protein L4 OS=Rickettsia bellii (strain RML369-C) OX=336407 GN=rpl...	[more]

BLAST of Sed0027185 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IUG2	1.8e-149	90.52	uncharacterized protein LOC111478684 OS=Cucurbita maxima OX=3661 GN=LOC111478684...	[more]
A0A6J1BUE8	3.1e-149	87.30	uncharacterized protein LOC111005636 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1GH25	5.2e-149	90.20	uncharacterized protein LOC111453831 OS=Cucurbita moschata OX=3662 GN=LOC1114538...	[more]
A0A0A0KH99	4.6e-145	85.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513440 PE=3 SV=1	[more]
A0A6J1BTV3	1.3e-144	85.71	uncharacterized protein LOC111005636 isoform X2 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Sed0027185 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G20060.1	2.9e-115	70.29	Ribosomal protein L4/L1 family	[more]
AT1G07320.1	8.6e-19	30.00	ribosomal protein L4	[more]
AT1G07320.2	8.6e-19	30.00	ribosomal protein L4	[more]
AT1G07320.3	8.6e-19	30.00	ribosomal protein L4	[more]
AT1G07320.4	8.6e-19	30.00	ribosomal protein L4	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013005	50S ribosomal protein uL4	TIGRFAM	TIGR03953	TIGR03953	coord: 109..293 e-value: 1.7E-69 score: 230.9
IPR013005	50S ribosomal protein uL4	PANTHER	PTHR10746	50S RIBOSOMAL PROTEIN L4	coord: 52..302
IPR013005	50S ribosomal protein uL4	HAMAP	MF_01328_B	Ribosomal_L4_B	coord: 99..298 score: 31.906527
IPR002136	Ribosomal protein L4/L1e	PFAM	PF00573	Ribosomal_L4	coord: 109..294 e-value: 7.1E-67 score: 224.8
IPR023574	Ribosomal protein L4 domain superfamily	GENE3D	3.40.1370.10		coord: 80..303 e-value: 1.8E-79 score: 268.1
IPR023574	Ribosomal protein L4 domain superfamily	SUPERFAMILY	52166	Ribosomal protein L4	coord: 94..296
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 138..185

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0027185.1	Sed0027185.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome