Sed0027181 (gene) Chayote v1

Overview


Name	Sed0027181
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Glutaredoxin family protein
Location	LG08: 2746337 .. 2750054 (-)
RNA-Seq Expression	Sed0027181
Synteny	Sed0027181

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAATATTATAAATAATTCCGAATTCCAGAAATACCCTCGTCTTCCCTAAAACGACTCTTACGAGCAAATAATCGCCAATCGCAGAAACCCCACCGGAAAAAAGCTCAGTTGCAGGTCCGGTAGTTGGATCAATGGCGGTTCCGGCGACCATGAGGAAGATGCTGACAGTATCAGCAGTTATGGTGTGCGCCGTGGCCGTAGCTTCTGTCTGCGGAGCCTCCTCTTCCCCAGAATCACGCTTCGTCAACAAAACCATCGCCTCGCATCAGATCGTCATCTTCTCCAAGTCCTATTGCCCGTAATTTCACTCTCTCACTCTTTTTATTCTCTTAATCGATCGATTCAGACTCCGAATGTGGATCCGTTCGTCTCATTTCTTCAAATCGGCTTTTGTTGTTCTGTTCTTGACATCCTGTGATCATGTTTTCAATTAATTTTGAATGGATTATGGGGGATTTTCTGTAATTTGTGTTGTTTGGTTGATTTTTCTTTGTGTAATGCAGGTATTGTAGAAGGGCAAAAGCTGTTTTCAAGGAATTGCGGAAAGTTCCTCATGTTGTTGAGTTGGATCAAAGGGGTAATTGCTTAATCTGCCCTTTTCTCGTTCTGTTTATGTACTGCTGAAATTTGGGTTGAATCTGATTGAAACTGAGCATGATTGTTTTGCTTGCCTTTGAACTCCTTACTATATTCCATGTCTTCTGTTCTGGCCCTTGCAACTACCTCTAGATTATGGCCAATTATGTATGAAAAATTCTTCTGCCTCTCTTCTCCTTTTTATTTTTTATATGATTCATTTTCAACCTTTGAATGAGCGATTTGGTCAACATATTTGTAGCATAGTAGTTAGAGATTCTGTGCTTAATGTTGCCTAGAGCCTCTGGAAATGGTGATTGCCTGCAACTGCAACCATAGTCTATGAAGCACGGACACAGACGCGGGACAAGGATACATACACGATAGGACACGACAATATGCCATTTTGTAAAAAATTAGGACACGGATACGTTCAAATTATTTTTACAATAAATATGTAAATTTAGTGTCCCCAAGGGGTGACACAGTGGTTGAAGACTTGGGCTTTGAGGGTATGCTCCCCTCAAGGTTCCAGGTTCGAGATTCAGCTGTAATATTACTTCTTCGATATCTCCCAGTGCCTGGCCTAGAGATGGGCGTGGTTACCCATGTTTCAAAAAAAAAAAGAGTAAATTTAGCATAAAGTAATAAATGTACTCTGCTAAAAAGCATATAATGTCAATTTAATTACAATGGACATCGGTTAGGCATGGCATCTGGGAGGTGGCGATAAACAAGTATTTTAGAAGATGGACACGAACTTTTTATCATGAAGAACAGGGAAAAGTGGTTGGTTTTTTGTGATAAAATGAGAGTGACTACTTTTTTGTTTTTCTTTTAACTTTTCCTTTACCCTTTTATTATTTAGTTAGCTATATTATTAATTATTTTGGGTTTGGGCTTAGCTCAAAGACCACACATGTTTACAAGGTGTGTCCAATAATTAAAAAAATAAAAAAAAATAAGGACATGTAAAATGGCGTGTTGGACCCTTGTCCGATAAGTGCCCGGAAGAATGTGTGTGGATTTTTTTCCTATTTTGAAGTGTTCGTACTTTCTAGCTTATGATTAGGTCTTATAACAGGATGCTCTGTAAAATGCCTTCCGAATTTGAAACTAACATGATGTGCTTCACACCGTGAATCCTCTTCATCTAAATTTCTTGGCCTATACACAGCTTGCTTAAATCATCGTATTCTTACCTTTATAGTCGATTCCTTCTTCAAGCTAGTTGATGAAGCTATTCCGTCCCTGTTACTTTTTTCAATTTGAATCACAATATAAATGAGAATAGAATCGAAACAAGTTGAGTTAAATAGATGACAAGGAATGGTGGGAATTTGATTAGATTAAGCGTGATTCAGAGTCAAATATTCTAACTACTCCATCTAATCACAGTCACGCACTTAGATCATCTAAACAATGGGTTAAGATGTGGGTCCTTCTTGATCAATCTGATTGACGAGTAAGATGACTTTTGGGAGTCACGATATAGAGGGCCAATACTGGGAGATGGTTGAGGAGGAAGAAGACCACTATGAAAGGGAAAAATGACGCGCAAGAGTGTTGTTTGAAATGTCTATTTGTTAGATTAGAGGCTTTACGAATAAGAACAATAGCTGACCATCATAAGTGTGCGTCGAAATCATGGTTCGAATCCTACAATCTCAATATGAGTGAACTAAAACTTAGATTAGAGGCTTTGAGGGCTGGCTTTTTTGTATGCTCGTCTTCTTTTTGTTTAACTAACTTCTTGGTCTCCTTTGTATTCTTTTCTTGCTACCATAATGAAATTTGGTTTTTGATAACCATCATGGAGTGGCTCAAGTGGTCAAAGAGGGTCTTGGGGTGCATAAAGCGATAAGTTCAATCGATGGTGGCCACCTACTTAGAAATTAATTTCATATGAATTTTTTTGACATCCAAATATTGTAGAGTCAGGCGGTATGCCCCGTGATATTAGTCGAGGTGCGCACAAGCTGGCTCGGACAGTCACGGATATAAAAAAAAATTGTTTTCGATAAAAATAAAAAGAAGAAAGTTACTGAGAAAAAAGTTTAGATAATGGGTCGACCAACTTATGTATCTTGTTATTCAGAACCTTCTTCTTCCTTTTGTCTTCTTAGATGATATGCTGGTTCTTTGTTTTCTTTTGTTTTCCTTTTTAACAAGGGTGGGGATAATTCAAGCTTTGAATGAGTTCCCCAAACCAACTTGCAAAACTATTGTCAGTAGACATATAATCTAGTAGCTCTTCTTTCCATATTCTTTTGTTTTAATCCAGTGTTATATACTTATATTGTTCTATTACTTGTTACCTTAAAGTTAAATATTCACAGAATTTGGATCTTAATCTCACAGATGATGGCAGTGCCATTCAAGATGCCCTTAGTGTAATCATTGGAAGGCGCACTGTGCCTCAAGTGTTCATAGATGGAAAACACATTGGTGGATCAGATGGTAATTGGCTCTTCATTAGCAACATAAATGTCTATAATATGTTTTTTTTTTATATTGTCTATAATATGTTTTTCTCCAAAGTACTCTTAACTCATTAAAACCCTTATTTTTCCAGATACTGTTGAAGCATATGAGAGTGGGGAGTTGGGCGAACTCCTGGGCATTAAGGAAGAGCAGAGATCCGATCTTTGAAATCGAACCTTCAATTGTAAGCAGAGATCTTTGCAGCTACAAAGTATAGTTTGCTCGAATTAGTCGACTCGGATATTGCTGATTTTCGAAGTTTAGTCCATAGATTAAACAAGGGTTTCCCCCTCAGCAGTTATGTTTGCTTAATTGGATCCCATAAGTCACTTCATTTTCTAGACTGGTCTTTTTTCCATCTACTTGTCTTGGAAAAGTCTTTTCCTTTGGACAAGTAAGAAGGTGAAAATAACTTCTACCACTTTAGTCTTAGTAACTCAGTCAAACTTTATCGATCGATCGATTTTATTTGGTTAGGGCATATTGAATAGTTTCTTACGAGATTGCATTGAATCGAAGTTCCATTTTAGTGACCTTGACATAAATTGTTGATTCTTTGAGTGTGTTTGGGCTCCCGTTTATGTAAAAGGCTGGGTTGATTATAATAACTCAACCGATGTTTGTCCCACCGTTTATTATAAAAAGTAGTTACCTAAA

mRNA sequence

TGAATATTATAAATAATTCCGAATTCCAGAAATACCCTCGTCTTCCCTAAAACGACTCTTACGAGCAAATAATCGCCAATCGCAGAAACCCCACCGGAAAAAAGCTCAGTTGCAGGTCCGGTAGTTGGATCAATGGCGGTTCCGGCGACCATGAGGAAGATGCTGACAGTATCAGCAGTTATGGTGTGCGCCGTGGCCGTAGCTTCTGTCTGCGGAGCCTCCTCTTCCCCAGAATCACGCTTCGTCAACAAAACCATCGCCTCGCATCAGATCGTCATCTTCTCCAAGTCCTATTGCCCGTATTGTAGAAGGGCAAAAGCTGTTTTCAAGGAATTGCGGAAAGTTCCTCATGTTGTTGAGTTGGATCAAAGGGATGATGGCAGTGCCATTCAAGATGCCCTTAGTGTAATCATTGGAAGGCGCACTGTGCCTCAAGTGTTCATAGATGGAAAACACATTGGTGGATCAGATGATACTGTTGAAGCATATGAGAGTGGGGAGTTGGGCGAACTCCTGGGCATTAAGGAAGAGCAGAGATCCGATCTTTGAAATCGAACCTTCAATTGTAAGCAGAGATCTTTGCAGCTACAAAGTATAGTTTGCTCGAATTAGTCGACTCGGATATTGCTGATTTTCGAAGTTTAGTCCATAGATTAAACAAGGGTTTCCCCCTCAGCAGTTATGTTTGCTTAATTGGATCCCATAAGTCACTTCATTTTCTAGACTGGTCTTTTTTCCATCTACTTGTCTTGGAAAAGTCTTTTCCTTTGGACAAGTAAGAAGGTGAAAATAACTTCTACCACTTTAGTCTTAGTAACTCAGTCAAACTTTATCGATCGATCGATTTTATTTGGTTAGGGCATATTGAATAGTTTCTTACGAGATTGCATTGAATCGAAGTTCCATTTTAGTGACCTTGACATAAATTGTTGATTCTTTGAGTGTGTTTGGGCTCCCGTTTATGTAAAAGGCTGGGTTGATTATAATAACTCAACCGATGTTTGTCCCACCGTTTATTATAAAAAGTAGTTACCTAAA

Coding sequence (CDS)

ATGGCGGTTCCGGCGACCATGAGGAAGATGCTGACAGTATCAGCAGTTATGGTGTGCGCCGTGGCCGTAGCTTCTGTCTGCGGAGCCTCCTCTTCCCCAGAATCACGCTTCGTCAACAAAACCATCGCCTCGCATCAGATCGTCATCTTCTCCAAGTCCTATTGCCCGTATTGTAGAAGGGCAAAAGCTGTTTTCAAGGAATTGCGGAAAGTTCCTCATGTTGTTGAGTTGGATCAAAGGGATGATGGCAGTGCCATTCAAGATGCCCTTAGTGTAATCATTGGAAGGCGCACTGTGCCTCAAGTGTTCATAGATGGAAAACACATTGGTGGATCAGATGATACTGTTGAAGCATATGAGAGTGGGGAGTTGGGCGAACTCCTGGGCATTAAGGAAGAGCAGAGATCCGATCTTTGA

Protein sequence

MAVPATMRKMLTVSAVMVCAVAVASVCGASSSPESRFVNKTIASHQIVIFSKSYCPYCRRAKAVFKELRKVPHVVELDQRDDGSAIQDALSVIIGRRTVPQVFIDGKHIGGSDDTVEAYESGELGELLGIKEEQRSDL

Homology

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BLAST of Sed0027181 vs. NCBI nr
Match: XP_038878490.1 (glutaredoxin-C4 [Benincasa hispida])

HSP 1 Score: 223.8 bits (569), Expect = 9.2e-55
Identity = 113/138 (81.88%), Postives = 122/138 (88.41%), Query Frame = 0


Query: 1   MAVPATMRKMLTVSAVMVCAVAVASVCGASSSPESRFVNKTIASHQIVIFSKSYCPYCRR 60
           M     MRKMLT SA MVCAVAV S+CGA SSPE+RF+  TI+SHQIVIFSKSYCPYCRR
Sbjct: 1   MTATVNMRKMLTASAAMVCAVAVVSLCGALSSPETRFIKNTISSHQIVIFSKSYCPYCRR 60

Query: 61  AKAVFKELRKVPHVVELDQRDDGSAIQDALSVIIGRRTVPQVFIDGKHIGGSDDTVEAYE 120
           AKAVFKELRKVPHVVELDQRDDGSAIQDALS  +G RTVPQVFI GKHIGGSDDTVEAYE
Sbjct: 61  AKAVFKELRKVPHVVELDQRDDGSAIQDALSARVGSRTVPQVFIGGKHIGGSDDTVEAYE 120

Query: 121 SGELGELLGIKEEQRSDL 139
           SGELG+LLGIKE+ ++DL
Sbjct: 121 SGELGKLLGIKEDNKADL 138

[Close]

BLAST of Sed0027181 vs. NCBI nr
Match: XP_004146344.1 (glutaredoxin-C4 [Cucumis sativus] >KGN65502.1 hypothetical protein Csa_019592 [Cucumis sativus])

HSP 1 Score: 220.7 bits (561), Expect = 7.8e-54
Identity = 112/138 (81.16%), Postives = 126/138 (91.30%), Query Frame = 0


Query: 1   MAVPATMRKMLTVSAVMVCAVAVASVCGASSSPESRFVNKTIASHQIVIFSKSYCPYCRR 60
           MA   +MRK+LT SA MVCAVA+AS+CGASSSPES F+  TIASHQIVIFSKSYCPYCRR
Sbjct: 1   MAATVSMRKILTASAAMVCAVAIASLCGASSSPES-FIKNTIASHQIVIFSKSYCPYCRR 60

Query: 61  AKAVFKELRKVPHVVELDQRDDGSAIQDALSVIIGRRTVPQVFIDGKHIGGSDDTVEAYE 120
           AKAVFKEL KVPHVVELDQRDDGS++Q+ALSV+ GRRTVPQVFIDGKHIGGSDDT+EAYE
Sbjct: 61  AKAVFKELHKVPHVVELDQRDDGSSLQNALSVLFGRRTVPQVFIDGKHIGGSDDTLEAYE 120

Query: 121 SGELGELLGIKEEQRSDL 139
           SGEL +LLGIKE+ ++DL
Sbjct: 121 SGELRKLLGIKEDHKADL 137

[Close]

BLAST of Sed0027181 vs. NCBI nr
Match: TYK28556.1 (glutaredoxin-C4-like [Cucumis melo var. makuwa])

HSP 1 Score: 220.7 bits (561), Expect = 7.8e-54
Identity = 113/138 (81.88%), Postives = 125/138 (90.58%), Query Frame = 0


Query: 1   MAVPATMRKMLTVSAVMVCAVAVASVCGASSSPESRFVNKTIASHQIVIFSKSYCPYCRR 60
           MA   +MRK+LT SA MVCAVA+AS+C ASSSPES F+  TIASHQIVIFSKSYCPYCRR
Sbjct: 1   MAATVSMRKILTASAAMVCAVAIASLCRASSSPES-FIKNTIASHQIVIFSKSYCPYCRR 60

Query: 61  AKAVFKELRKVPHVVELDQRDDGSAIQDALSVIIGRRTVPQVFIDGKHIGGSDDTVEAYE 120
           AKAVFKEL KVPHVVELDQRDDGSA+Q+ALSV+ GRRTVPQVFIDGKHIGGSDDTVEAYE
Sbjct: 61  AKAVFKELNKVPHVVELDQRDDGSALQNALSVLFGRRTVPQVFIDGKHIGGSDDTVEAYE 120

Query: 121 SGELGELLGIKEEQRSDL 139
           SGEL +LLGIKE+ ++DL
Sbjct: 121 SGELSKLLGIKEDHKADL 137

[Close]

BLAST of Sed0027181 vs. NCBI nr
Match: XP_008453540.1 (PREDICTED: glutaredoxin-C4-like [Cucumis melo] >KAA0058193.1 glutaredoxin-C4-like [Cucumis melo var. makuwa])

HSP 1 Score: 218.8 bits (556), Expect = 3.0e-53
Identity = 112/138 (81.16%), Postives = 124/138 (89.86%), Query Frame = 0


Query: 1   MAVPATMRKMLTVSAVMVCAVAVASVCGASSSPESRFVNKTIASHQIVIFSKSYCPYCRR 60
           MA   +MRK+LT SA MVCAVA+AS+C ASSSPES F+   IASHQIVIFSKSYCPYCRR
Sbjct: 1   MAATVSMRKILTASAAMVCAVAIASLCRASSSPES-FIKNAIASHQIVIFSKSYCPYCRR 60

Query: 61  AKAVFKELRKVPHVVELDQRDDGSAIQDALSVIIGRRTVPQVFIDGKHIGGSDDTVEAYE 120
           AKAVFKEL KVPHVVELDQRDDGSA+Q+ALSV+ GRRTVPQVFIDGKHIGGSDDTVEAYE
Sbjct: 61  AKAVFKELNKVPHVVELDQRDDGSALQNALSVLFGRRTVPQVFIDGKHIGGSDDTVEAYE 120

Query: 121 SGELGELLGIKEEQRSDL 139
           SGEL +LLGIKE+ ++DL
Sbjct: 121 SGELSKLLGIKEDHKADL 137

[Close]

BLAST of Sed0027181 vs. NCBI nr
Match: XP_022135442.1 (glutaredoxin-C4 [Momordica charantia])

HSP 1 Score: 215.3 bits (547), Expect = 3.3e-52
Identity = 108/138 (78.26%), Postives = 122/138 (88.41%), Query Frame = 0


Query: 1   MAVPATMRKMLTVSAVMVCAVAVASVCGASSSPESRFVNKTIASHQIVIFSKSYCPYCRR 60
           MA    +RKMLTVSA ++CA+A AS+CGASSSPES FV KTIASHQIVIFSKSYCPYCRR
Sbjct: 1   MAATVNVRKMLTVSAAVMCAMAAASLCGASSSPESLFVKKTIASHQIVIFSKSYCPYCRR 60

Query: 61  AKAVFKELRKVPHVVELDQRDDGSAIQDALSVIIGRRTVPQVFIDGKHIGGSDDTVEAYE 120
           AKAVF+EL+KVPHVVELD+RDDG  IQDA+  ++GR TVPQVFIDGKHIGGSDDTV AYE
Sbjct: 61  AKAVFEELKKVPHVVELDRRDDGREIQDAVGELVGRHTVPQVFIDGKHIGGSDDTVAAYE 120

Query: 121 SGELGELLGIKEEQRSDL 139
           SG+L +LLGIKEE R+DL
Sbjct: 121 SGKLSKLLGIKEEDRADL 138

[Close]

BLAST of Sed0027181 vs. ExPASy Swiss-Prot
Match: Q8LFQ6 (Glutaredoxin-C4 OS=Arabidopsis thaliana OX=3702 GN=GRXC4 PE=2 SV=2)

HSP 1 Score: 164.5 bits (415), Expect = 8.7e-40
Identity = 81/134 (60.45%), Postives = 111/134 (82.84%), Query Frame = 0


Query: 6   TMRKMLTVSAVMVCAVA-VASVCGASSSPESRFVNKTIASHQIVIFSKSYCPYCRRAKAV 65
           TM + +++  ++V  V  ++ V  A+SSPE+ FV KTI+SH+IVIFSKSYCPYC++AK+V
Sbjct: 2   TMFRSISMVMLLVALVTFISMVSSAASSPEADFVKKTISSHKIVIFSKSYCPYCKKAKSV 61

Query: 66  FKELRKVPHVVELDQRDDGSAIQDALSVIIGRRTVPQVFIDGKHIGGSDDTVEAYESGEL 125
           F+EL +VP+VVELD+R+DG +IQ AL  I+GRRTVPQVFI+GKH+GGSDDTV+AYESGEL
Sbjct: 62  FRELDQVPYVVELDEREDGWSIQTALGEIVGRRTVPQVFINGKHLGGSDDTVDAYESGEL 121

Query: 126 GELLGIKEEQRSDL 139
            +LLG+   + ++L
Sbjct: 122 AKLLGVSGNKEAEL 135

[Close]

BLAST of Sed0027181 vs. ExPASy Swiss-Prot
Match: Q0DAE4 (Glutaredoxin-C8 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC8 PE=2 SV=2)

HSP 1 Score: 150.2 bits (378), Expect = 1.7e-35
Identity = 76/128 (59.38%), Postives = 98/128 (76.56%), Query Frame = 0


Query: 5   ATMRKMLTVSAVMVCAVAVASVCGASSSPESRFVNKTIASHQIVIFSKSYCPYCRRAKAV 64
           A + +   ++A  + A+A      + ++ +S FV  T+ +H +VIFSKSYCPYCRRAKAV
Sbjct: 3   ALLGRRFGMAAAALIALAALGSAASGTASKSSFVKSTVKAHDVVIFSKSYCPYCRRAKAV 62

Query: 65  FK--ELRKVPHVVELDQRDDGSAIQDALSVIIGRRTVPQVFIDGKHIGGSDDTVEAYESG 124
           FK  EL+K P+VVELDQR+DG  IQDALS ++GRRTVPQVF+ GKH+GGSDDTVEAYESG
Sbjct: 63  FKELELKKEPYVVELDQREDGWEIQDALSDMVGRRTVPQVFVHGKHLGGSDDTVEAYESG 122

Query: 125 ELGELLGI 131
           +L +LL I
Sbjct: 123 KLAKLLNI 130

[Close]

BLAST of Sed0027181 vs. ExPASy Swiss-Prot
Match: Q6H628 (Monothiol glutaredoxin-S6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS6 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 3.8e-27
Identity = 61/131 (46.56%), Postives = 90/131 (68.70%), Query Frame = 0


Query: 5   ATMRKMLTVSAVMVCAVAVASVCGASSSPESRFVNKTIASHQIVIFSKSYCPYCRRAKAV 64
           A  R  + ++  ++  +A A    A+ SP S FV   I S++I IFSK+YCPY  RAK +
Sbjct: 2   AAARAAVPIAVFLLLVLAEADPAAATRSP-SAFVQNAIYSNRITIFSKTYCPYSMRAKRI 61

Query: 65  FKELRKVPHVVELDQRDDGSAIQDALSVIIGRRTVPQVFIDGKHIGGSDDTVEAYESGEL 124
           F++L++ P++VELD R+DG  IQ  L  ++GR TVPQVF++G+H+GGSDDT  A+ +G+L
Sbjct: 62  FRDLKENPYIVELDLREDGREIQSVLLDLVGRHTVPQVFVNGQHVGGSDDTANAHSNGQL 121

Query: 125 GELLGIKEEQR 136
            +LLG  + QR
Sbjct: 122 QKLLGNSQSQR 131

[Close]

BLAST of Sed0027181 vs. ExPASy Swiss-Prot
Match: Q9FVX1 (Glutaredoxin-C3 OS=Arabidopsis thaliana OX=3702 GN=GRXC3 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.9e-26
Identity = 62/126 (49.21%), Postives = 86/126 (68.25%), Query Frame = 0


Query: 3   VPATMRKMLTVSAVMVCAVAVASVCGASSSPESRFVNKTIASHQIVIFSKSYCPYCRRAK 62
           V  + R+++  + ++   +   S    +++  S FV   I S++IVIFSKSYCPYC R+K
Sbjct: 2   VDQSPRRVVVAALLLFVVLCDLSNSAGAANSVSAFVQNAILSNKIVIFSKSYCPYCLRSK 61

Query: 63  AVFKELRKVPHVVELDQRDDGSAIQDALSVIIGRRTVPQVFIDGKHIGGSDDTVEAYESG 122
            +F +L++ P VVELDQR+DG  IQ  L   +GRRTVPQVF++GKHIGGSDD   A ESG
Sbjct: 62  RIFSQLKEEPFVVELDQREDGDQIQYELLEFVGRRTVPQVFVNGKHIGGSDDLGAALESG 121

Query: 123 ELGELL 129
           +L +LL
Sbjct: 122 QLQKLL 127

[Close]

BLAST of Sed0027181 vs. ExPASy Swiss-Prot
Match: P55142 (Glutaredoxin-C6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC6 PE=1 SV=2)

HSP 1 Score: 95.5 bits (236), Expect = 5.0e-19
Identity = 45/89 (50.56%), Postives = 61/89 (68.54%), Query Frame = 0


Query: 40  KTIASHQIVIFSKSYCPYCRRAKAVFKELRKVPHVVELDQRDDGSAIQDALSVIIGRRTV 99
           +T+AS  +V++SKSYCP+C R K +F++L      +ELD   DGS +Q AL+   G+RTV
Sbjct: 8   ETVASAPVVVYSKSYCPFCVRVKKLFEQLGATFKAIELDGESDGSELQSALAEWTGQRTV 67

Query: 100 PQVFIDGKHIGGSDDTVEAYESGELGELL 129
           P VFI+GKHIGG DDT+     G+L  LL
Sbjct: 68  PNVFINGKHIGGCDDTLALNNEGKLVPLL 96

[Close]

BLAST of Sed0027181 vs. ExPASy TrEMBL
Match: A0A5D3DXQ7 (Glutaredoxin-C4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G002030 PE=3 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 3.8e-54
Identity = 113/138 (81.88%), Postives = 125/138 (90.58%), Query Frame = 0


Query: 1   MAVPATMRKMLTVSAVMVCAVAVASVCGASSSPESRFVNKTIASHQIVIFSKSYCPYCRR 60
           MA   +MRK+LT SA MVCAVA+AS+C ASSSPES F+  TIASHQIVIFSKSYCPYCRR
Sbjct: 1   MAATVSMRKILTASAAMVCAVAIASLCRASSSPES-FIKNTIASHQIVIFSKSYCPYCRR 60

Query: 61  AKAVFKELRKVPHVVELDQRDDGSAIQDALSVIIGRRTVPQVFIDGKHIGGSDDTVEAYE 120
           AKAVFKEL KVPHVVELDQRDDGSA+Q+ALSV+ GRRTVPQVFIDGKHIGGSDDTVEAYE
Sbjct: 61  AKAVFKELNKVPHVVELDQRDDGSALQNALSVLFGRRTVPQVFIDGKHIGGSDDTVEAYE 120

Query: 121 SGELGELLGIKEEQRSDL 139
           SGEL +LLGIKE+ ++DL
Sbjct: 121 SGELSKLLGIKEDHKADL 137

[Close]

BLAST of Sed0027181 vs. ExPASy TrEMBL
Match: A0A0A0LXH3 (Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G427520 PE=3 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 3.8e-54
Identity = 112/138 (81.16%), Postives = 126/138 (91.30%), Query Frame = 0


Query: 1   MAVPATMRKMLTVSAVMVCAVAVASVCGASSSPESRFVNKTIASHQIVIFSKSYCPYCRR 60
           MA   +MRK+LT SA MVCAVA+AS+CGASSSPES F+  TIASHQIVIFSKSYCPYCRR
Sbjct: 1   MAATVSMRKILTASAAMVCAVAIASLCGASSSPES-FIKNTIASHQIVIFSKSYCPYCRR 60

Query: 61  AKAVFKELRKVPHVVELDQRDDGSAIQDALSVIIGRRTVPQVFIDGKHIGGSDDTVEAYE 120
           AKAVFKEL KVPHVVELDQRDDGS++Q+ALSV+ GRRTVPQVFIDGKHIGGSDDT+EAYE
Sbjct: 61  AKAVFKELHKVPHVVELDQRDDGSSLQNALSVLFGRRTVPQVFIDGKHIGGSDDTLEAYE 120

Query: 121 SGELGELLGIKEEQRSDL 139
           SGEL +LLGIKE+ ++DL
Sbjct: 121 SGELRKLLGIKEDHKADL 137

[Close]

BLAST of Sed0027181 vs. ExPASy TrEMBL
Match: A0A5A7UQP8 (Glutaredoxin-C4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G005140 PE=3 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.4e-53
Identity = 112/138 (81.16%), Postives = 124/138 (89.86%), Query Frame = 0


Query: 1   MAVPATMRKMLTVSAVMVCAVAVASVCGASSSPESRFVNKTIASHQIVIFSKSYCPYCRR 60
           MA   +MRK+LT SA MVCAVA+AS+C ASSSPES F+   IASHQIVIFSKSYCPYCRR
Sbjct: 1   MAATVSMRKILTASAAMVCAVAIASLCRASSSPES-FIKNAIASHQIVIFSKSYCPYCRR 60

Query: 61  AKAVFKELRKVPHVVELDQRDDGSAIQDALSVIIGRRTVPQVFIDGKHIGGSDDTVEAYE 120
           AKAVFKEL KVPHVVELDQRDDGSA+Q+ALSV+ GRRTVPQVFIDGKHIGGSDDTVEAYE
Sbjct: 61  AKAVFKELNKVPHVVELDQRDDGSALQNALSVLFGRRTVPQVFIDGKHIGGSDDTVEAYE 120

Query: 121 SGELGELLGIKEEQRSDL 139
           SGEL +LLGIKE+ ++DL
Sbjct: 121 SGELSKLLGIKEDHKADL 137

[Close]

BLAST of Sed0027181 vs. ExPASy TrEMBL
Match: A0A1S3BXN4 (glutaredoxin-C4-like OS=Cucumis melo OX=3656 GN=LOC103494223 PE=3 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.4e-53
Identity = 112/138 (81.16%), Postives = 124/138 (89.86%), Query Frame = 0


Query: 1   MAVPATMRKMLTVSAVMVCAVAVASVCGASSSPESRFVNKTIASHQIVIFSKSYCPYCRR 60
           MA   +MRK+LT SA MVCAVA+AS+C ASSSPES F+   IASHQIVIFSKSYCPYCRR
Sbjct: 1   MAATVSMRKILTASAAMVCAVAIASLCRASSSPES-FIKNAIASHQIVIFSKSYCPYCRR 60

Query: 61  AKAVFKELRKVPHVVELDQRDDGSAIQDALSVIIGRRTVPQVFIDGKHIGGSDDTVEAYE 120
           AKAVFKEL KVPHVVELDQRDDGSA+Q+ALSV+ GRRTVPQVFIDGKHIGGSDDTVEAYE
Sbjct: 61  AKAVFKELNKVPHVVELDQRDDGSALQNALSVLFGRRTVPQVFIDGKHIGGSDDTVEAYE 120

Query: 121 SGELGELLGIKEEQRSDL 139
           SGEL +LLGIKE+ ++DL
Sbjct: 121 SGELSKLLGIKEDHKADL 137

[Close]

BLAST of Sed0027181 vs. ExPASy TrEMBL
Match: A0A6J1C2Q1 (glutaredoxin-C4 OS=Momordica charantia OX=3673 GN=LOC111007397 PE=3 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.6e-52
Identity = 108/138 (78.26%), Postives = 122/138 (88.41%), Query Frame = 0


Query: 1   MAVPATMRKMLTVSAVMVCAVAVASVCGASSSPESRFVNKTIASHQIVIFSKSYCPYCRR 60
           MA    +RKMLTVSA ++CA+A AS+CGASSSPES FV KTIASHQIVIFSKSYCPYCRR
Sbjct: 1   MAATVNVRKMLTVSAAVMCAMAAASLCGASSSPESLFVKKTIASHQIVIFSKSYCPYCRR 60

Query: 61  AKAVFKELRKVPHVVELDQRDDGSAIQDALSVIIGRRTVPQVFIDGKHIGGSDDTVEAYE 120
           AKAVF+EL+KVPHVVELD+RDDG  IQDA+  ++GR TVPQVFIDGKHIGGSDDTV AYE
Sbjct: 61  AKAVFEELKKVPHVVELDRRDDGREIQDAVGELVGRHTVPQVFIDGKHIGGSDDTVAAYE 120

Query: 121 SGELGELLGIKEEQRSDL 139
           SG+L +LLGIKEE R+DL
Sbjct: 121 SGKLSKLLGIKEEDRADL 138

[Close]

BLAST of Sed0027181 vs. TAIR 10
Match: AT5G20500.1 (Glutaredoxin family protein )

HSP 1 Score: 164.5 bits (415), Expect = 6.2e-41
Identity = 81/134 (60.45%), Postives = 111/134 (82.84%), Query Frame = 0


Query: 6   TMRKMLTVSAVMVCAVA-VASVCGASSSPESRFVNKTIASHQIVIFSKSYCPYCRRAKAV 65
           TM + +++  ++V  V  ++ V  A+SSPE+ FV KTI+SH+IVIFSKSYCPYC++AK+V
Sbjct: 2   TMFRSISMVMLLVALVTFISMVSSAASSPEADFVKKTISSHKIVIFSKSYCPYCKKAKSV 61

Query: 66  FKELRKVPHVVELDQRDDGSAIQDALSVIIGRRTVPQVFIDGKHIGGSDDTVEAYESGEL 125
           F+EL +VP+VVELD+R+DG +IQ AL  I+GRRTVPQVFI+GKH+GGSDDTV+AYESGEL
Sbjct: 62  FRELDQVPYVVELDEREDGWSIQTALGEIVGRRTVPQVFINGKHLGGSDDTVDAYESGEL 121

Query: 126 GELLGIKEEQRSDL 139
            +LLG+   + ++L
Sbjct: 122 AKLLGVSGNKEAEL 135

[Close]

BLAST of Sed0027181 vs. TAIR 10
Match: AT1G77370.1 (Glutaredoxin family protein )

HSP 1 Score: 120.2 bits (300), Expect = 1.3e-27
Identity = 62/126 (49.21%), Postives = 86/126 (68.25%), Query Frame = 0


Query: 3   VPATMRKMLTVSAVMVCAVAVASVCGASSSPESRFVNKTIASHQIVIFSKSYCPYCRRAK 62
           V  + R+++  + ++   +   S    +++  S FV   I S++IVIFSKSYCPYC R+K
Sbjct: 2   VDQSPRRVVVAALLLFVVLCDLSNSAGAANSVSAFVQNAILSNKIVIFSKSYCPYCLRSK 61

Query: 63  AVFKELRKVPHVVELDQRDDGSAIQDALSVIIGRRTVPQVFIDGKHIGGSDDTVEAYESG 122
            +F +L++ P VVELDQR+DG  IQ  L   +GRRTVPQVF++GKHIGGSDD   A ESG
Sbjct: 62  RIFSQLKEEPFVVELDQREDGDQIQYELLEFVGRRTVPQVFVNGKHIGGSDDLGAALESG 121

Query: 123 ELGELL 129
           +L +LL
Sbjct: 122 QLQKLL 127

[Close]

BLAST of Sed0027181 vs. TAIR 10
Match: AT2G20270.1 (Thioredoxin superfamily protein )

HSP 1 Score: 91.3 bits (225), Expect = 6.7e-19
Identity = 47/108 (43.52%), Postives = 69/108 (63.89%), Query Frame = 0


Query: 22  AVASVCGASSSPESRFVNKTIASHQIVIFSKSYCPYCRRAKAVFKELRKVPHVVELDQ-R 81
           A++S   +S S     V  T+A + +V++SK++C Y  + K++FK L+  P VVELDQ  
Sbjct: 62  AMSSSSSSSGSTLEETVKTTVAENPVVVYSKTWCSYSSQVKSLFKSLQVEPLVVELDQLG 121

Query: 82  DDGSAIQDALSVIIGRRTVPQVFIDGKHIGGSDDTVEAYESGELGELL 129
            +GS +Q+ L  I G+ TVP VFI GKHIGG  DT++ +  GEL  +L
Sbjct: 122 SEGSQLQNVLEKITGQYTVPNVFIGGKHIGGCSDTLQLHNKGELEAIL 169

[Close]

BLAST of Sed0027181 vs. TAIR 10
Match: AT5G40370.1 (Glutaredoxin family protein )

HSP 1 Score: 85.9 bits (211), Expect = 2.8e-17
Identity = 42/87 (48.28%), Postives = 54/87 (62.07%), Query Frame = 0


Query: 42  IASHQIVIFSKSYCPYCRRAKAVFKELRKVPHVVELDQRDDGSAIQDALSVIIGRRTVPQ 101
           + S  +V+FSK+YCPYC R K + ++L      VELD   DGS IQ  L+   G+RTVP 
Sbjct: 10  VNSESVVVFSKTYCPYCVRVKELLQQLGAKFKAVELDTESDGSQIQSGLAEWTGQRTVPN 69

Query: 102 VFIDGKHIGGSDDTVEAYESGELGELL 129
           VFI G HIGG D T   ++ G+L  LL
Sbjct: 70  VFIGGNHIGGCDATSNLHKDGKLVPLL 96

[Close]

BLAST of Sed0027181 vs. TAIR 10
Match: AT4G28730.1 (Glutaredoxin family protein )

HSP 1 Score: 85.1 bits (209), Expect = 4.8e-17
Identity = 50/119 (42.02%), Postives = 68/119 (57.14%), Query Frame = 0


Query: 19  CAV-AVASVCGASSSPESRF-------VNKTIASHQIVIFSKSYCPYCRRAKAVFKELRK 78
           C+V A+ S   A+SS  S F       + KT+  + +VI+SK++C YC   K +FK L  
Sbjct: 46  CSVRAMTSSSSAASSSSSSFGSRMEESIRKTVTENTVVIYSKTWCSYCTEVKTLFKRLGV 105

Query: 79  VPHVVELDQ-RDDGSAIQDALSVIIGRRTVPQVFIDGKHIGGSDDTVEAYESGELGELL 129
            P VVELDQ    G  +Q  L  + G+ TVP VF+ GKHIGG  DTV+    G+L  +L
Sbjct: 106 QPLVVELDQLGPQGPQLQKVLERLTGQHTVPNVFVCGKHIGGCTDTVKLNRKGDLELML 164

The following BLAST results are available for this feature:

BLAST of Sed0027181 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878490.1	9.2e-55	81.88	glutaredoxin-C4 [Benincasa hispida]	[more]
XP_004146344.1	7.8e-54	81.16	glutaredoxin-C4 [Cucumis sativus] >KGN65502.1 hypothetical protein Csa_019592 [C...	[more]
TYK28556.1	7.8e-54	81.88	glutaredoxin-C4-like [Cucumis melo var. makuwa]	[more]
XP_008453540.1	3.0e-53	81.16	PREDICTED: glutaredoxin-C4-like [Cucumis melo] >KAA0058193.1 glutaredoxin-C4-lik...	[more]
XP_022135442.1	3.3e-52	78.26	glutaredoxin-C4 [Momordica charantia]	[more]

BLAST of Sed0027181 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LFQ6	8.7e-40	60.45	Glutaredoxin-C4 OS=Arabidopsis thaliana OX=3702 GN=GRXC4 PE=2 SV=2	[more]
Q0DAE4	1.7e-35	59.38	Glutaredoxin-C8 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC8 PE=2 SV=2	[more]
Q6H628	3.8e-27	46.56	Monothiol glutaredoxin-S6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS6 PE=2...	[more]
Q9FVX1	1.9e-26	49.21	Glutaredoxin-C3 OS=Arabidopsis thaliana OX=3702 GN=GRXC3 PE=2 SV=1	[more]
P55142	5.0e-19	50.56	Glutaredoxin-C6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC6 PE=1 SV=2	[more]

BLAST of Sed0027181 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DXQ7	3.8e-54	81.88	Glutaredoxin-C4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629...	[more]
A0A0A0LXH3	3.8e-54	81.16	Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G42752...	[more]
A0A5A7UQP8	1.4e-53	81.16	Glutaredoxin-C4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274...	[more]
A0A1S3BXN4	1.4e-53	81.16	glutaredoxin-C4-like OS=Cucumis melo OX=3656 GN=LOC103494223 PE=3 SV=1	[more]
A0A6J1C2Q1	1.6e-52	78.26	glutaredoxin-C4 OS=Momordica charantia OX=3673 GN=LOC111007397 PE=3 SV=1	[more]

BLAST of Sed0027181 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20500.1	6.2e-41	60.45	Glutaredoxin family protein	[more]
AT1G77370.1	1.3e-27	49.21	Glutaredoxin family protein	[more]
AT2G20270.1	6.7e-19	43.52	Thioredoxin superfamily protein	[more]
AT5G40370.1	2.8e-17	48.28	Glutaredoxin family protein	[more]
AT4G28730.1	4.8e-17	42.02	Glutaredoxin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014025	Glutaredoxin subgroup	PRINTS	PR00160	GLUTAREDOXIN	coord: 47..65 score: 47.81 coord: 92..105 score: 54.46 coord: 106..119 score: 43.75
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 47..109 e-value: 1.4E-19 score: 70.1
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 26..129 e-value: 4.5E-38 score: 131.4
None	No IPR available	PANTHER	PTHR45694:SF19	BNAA02G04900D PROTEIN	coord: 16..125
None	No IPR available	PANTHER	PTHR45694	GLUTAREDOXIN 2	coord: 16..125
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 35..135 score: 23.474447
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 47..127 e-value: 1.36463E-44 score: 138.827
IPR011899	Glutaredoxin, eukaryotic/virial	TIGRFAM	TIGR02180	TIGR02180	coord: 47..127 e-value: 3.3E-30 score: 102.1
IPR011767	Glutaredoxin active site	PROSITE	PS00195	GLUTAREDOXIN_1	coord: 49..64
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 37..128

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0027181.1	Sed0027181.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098869	cellular oxidant detoxification
biological_process	GO:0034599	cellular response to oxidative stress
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0008794	arsenate reductase (glutaredoxin) activity
molecular_function	GO:0004362	glutathione-disulfide reductase (NADPH) activity
molecular_function	GO:0097573	glutathione oxidoreductase activity