Sed0027168 (gene) Chayote v1

Overview


Name	Sed0027168
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Transmembrane protein
Location	LG05: 42820912 .. 42825490 (-)
RNA-Seq Expression	Sed0027168
Synteny	Sed0027168

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCGGAATTGGGTTGAAATTTCAACCCTTCTCTATTGATTAACATAGAGGAAAAGGGAAAAAAAAATGGTAGACCTGAAGGGAGTGAATGGTAATAGGTCCGAGTTTGTGCGAGCCGGTAACAGCGAAACCGTTGAGCTTCAATGTTCTACTTTTTTGTTGTTGCCTTTCCCTTACTTTACTCATTCCTTCCTTCCCCATTCTTCTTCTCCTCAAAAACCCACATTCAAGAACCCAATTTCACCCCCAAATTGATGCCCAAATATGTTCAATCTTGAAGATGAGTTCATAATCCAACCTGGGGTTTCATGGTTAATCTGGATTCAGCTTCTCGTCATCATCCTCATCTTCGCCCTTTACTGTCTCAGCATCTTCGCTGTTGATTTCTCCACTACCAATACCCACAGCGGATCCACTGCCGCCATTGCTTCCTCTTCTTCTACTCGGCTCGTTTCTGAAATTGCTCAAAAGGGCAAGAATCTTTCCAAGCAGAACATCAGAATCGGCTCTAATCCGTCGCGGAATGCTCAGGTACGGCTACTGTGTGTGAAATTGTTCCAAGAATTGTTGGGTCATTTTTCGATTATGTCCAGAATTTAGGGTTCCTGCCAACTTTGTTTCGTTTGTTTGAGTTCCAATTTTGGGATTCTTCTATGTACCACGGTCTCTGCGGAATCAATTTTATGTTTCTTTTTGTTCGTTGATGGATCGGATCCTTGCAGACGAAGGAGTGGAATATAGGGTTTACAGGTTTCTTTGGTTTCTGTATGAATTGAATAGTTTGTTTAGACTACTACATAGCAAATTTGGTGTTGATTGTCTCAAGAAACCCCTGTGGCTGTGATGCTTGAAAATTGGGGAGGTTTTTCCATTTTATCAAGACTTTCTTGCTACCCTATGAGCCGTCTTGTCTAGTGCTCAAAAGTTTCACTGATTCAACTACCTTCTCCAACGTAGAGGCCAAATTCTTGGGTTAGGGTTTACAGGGAATGAGTATCTTGCCTTATGACCTTGCGAAACTGCGATACATGCCCAATTGGATGGTCGGCTACGTTTACGCTAATTGCTACCGATTCAGAATGAAAAAAATTAGGTCAATAGTGCTGGGCTAGTTTTTCATTGAGGAGTGCTGCAAGTGAACATTAGGGGGGTAGAGTTTGGGAAGTGGTACTCTTAGCTGAATTCTGCTAAAGGTTCAACCAAAACTGCATCACACTTCCAGCTATTGGTCAAAAGCAGCAGTTACATCAAAATTCTGTTTATTGTATAGAATAGTAGCAGGTGTCTTCCATTGACAATCAAGAAAGGGGTCAGGTTGGTGAAATTGTGGAGAACATTACACCAAAATTCTACTTTAGGAATATCCAGAACTGACTCAGAAAAATTGCATCTGGGATAATGGTGGTGGAAACCCCATGTAAGCAACTAGTATGTGTTCCTGGTTATTGTGCAAAAATTAAGAAGTTTTCTAGGAGTTATAGGGTAGCTTTTAATTTCCAATACCTTTAGAAAATGTCTGTTCCTCTATGAAATAGTGTGTTGATAGTTTAAATTTTGAGTGCCTTTATTGTGTTTGATACTCTGGCTCGCCTTAGAGAACAAAAACCCTGCTCAAAAGCCTTGCAATGCAAAACTCGGATACATGCTCAATTTGAGGGATGGAGACTTGTGCTTGAAGGTCTTGCTTTAATGCTACTTACCCAAAACCCTTCAGAATGCAAAATAGGTTAGAAATAATGTGGAGCAAGTTTATTGTTGAGGCATACTCCAAGTAAGCAACTAGGGATGGAGTTTGAGATGGACCATATTGCTGACACCCAACAACAAATCTTTGAAGTTAATGTTTGTACCTTGCTCTGTGCTTGAGGTTGATGTTGCTAAGACTCAATTGAACTTTCATCACAATCTTGTTGCTATTTGGTCTGCAACAGAATTTATAAAGAAACTATTTGCTCTATTTTGGGGATTATCATAATTTTTTTAAAATAAAACGAAGTCACATCAAAAGAAAAGGTGAAAAAAAAAACAGCCTGCAGGCTTTAGGGACGAGGAATTTCTAAGCTTGAGAAGAAGACCTCTAATCAAGGTTGATGATGAGCGAAGGAATGTTACAAAAAGATTTGTGAGCCTTCCCTAACATGATGCCGTATGTTGTACACAAGTCACAAAGAGAATCTATAGAAGTGCAGTAGTGCACTTATCTAAGGAACTCCTCAAGTTTCTCTCATTTCAAAGTTGCACAATGAGCGCTCTACAAGCATTTGTCTAAAGGGTTTTGGATTTTTCTCTACCAAGAGAGTAATTCAGTTAACTCGTTTTCCATTGTTTTTCGGGGACACAAAACCAAAAATATATATTGGAAGCAAATTTTCAACCCATTTTTGCAAATGGGACAACGAAGAAGAAGATGACTTGAAGATTCCTCATCTTTGTTTCATATTAAATACACATACCGTGGGACAAAGAGATGTTTGGGCTCCTGTCTTGAATTTTGTTATTTATTTAAACTGTCATGAGCCAGGGAACAAATGCAGAATTCAACTATACCTGGGAGCACTTCAGGGTGGAATCCATAGGGACAAAGAATTTATTTGATCAATGCATGCAAGTATAATCTAGGAGCTCTGATAATAACAATGGTAGAAAGATGTTGACGTGCTTAGAAAAGTAACAAGGTGCGTGAAGAAAATGGATAGTATCATTTCAGGTACTTAGACATATCTAAATGTTCTGAATAATGCTAAATGCAGATGATGTGCTCAAGAAAGCTTTAACAGATGAATGGGAAATTAAGATGTCGGCTTGGGCTACCTAATGCAATTGCTATCCTATACTCCTCGCAAAAAAATTGATTGAACCTGCTGTGAACCTATACAGGGGTGAACATTTGGTCGCCTCCTTATCGGTGGCACTACGCGCTATGGTAAAGTTAGGTCTCCCTACTCCGTTATGGGTGTCCAGGGAAAGGATAATGAAAAAGATTATGGGGGAATGGTTCTCTTATCCATGTTTGGGCTATCGGCAACCATTATCCCCGTAATCAATATTCATTCTCCCTTAATCTTATTTCCCTGTAATCACTTTTCATTCTTCCTATTACCGCTTTTCATTATCTTCATATCCATTATTTTGTTCTCCTCATAATCATTCTATGCATTATGTACCTTAAACACAAGTAATGGTTCCTCCCATAATCATTCTCCACACCCCGAACACGAGTAAATGTTCTCTTATTCTCTTCACCCAATCACAAATAATCATTCTTTTTGTTAACCATTCTCCCCCATATTCTCTCTCCATGATCATTCTCATTCTCCTTGTCCCAAACACCCTCTTATTGATAAAATCTTTTCTACCCCGGATAACATGCAAGTTGGTTGCCTATCTCCCGTGCACCTGGGTTATTACACTACCCTTGCTGCTCACGTGACTTGCAAGTGATGCCCTATTTCCAAGACAAGCAAGTAGTTAACTTACCCTTGTTTTATCGATTATTTCGAATACCATTCCCACTCAGGGTCAAATAGCGGTGTGTGATAGTCCTATGCTTCAGTTGATCAGACAAACACAAGTATATGGGAAAAAATTCTCAAAAGGTTCACCAAATTTATTCTATGGCATTAAAGGCAACAATTAAGTTAAGATCATTAGCCGAGCATTGATAAGATGGCTTAGCTCATGCTAAAACAAAATACATAATGACAAAACAAGAAAATACCTTAAAACTCTAAAAACCCATTAATAGTAAGCTTTTGCTTGGTGTATGTATCAATATATAGTTCTTGGAATCAAGAATTCACCATCAGAGTGCATTGAATATCTACATTCATAATAATGTCTGAAATTGTAACAAAACCATATGGAATCTGACAGGTGAATATTGAGCAAAGCATCAGCAGGGAGATAGCGACAAGTACGAGCAGCAGCAGAATCGTGCAAGTCGGAGAAGACAACGCAGTAGGAGGGGAAGGCTCTCAAGAAACCAAGCAGCTAGATCTTCACCCTTGCAGTTATTTCAGGCTTGCCAAATCAGCTTTTCTCAGGTGTCTGGGGTTGGACTCTTCAACAGAGAATTCAGTCTCATCAGATGAAAGGCAAAGAAGGGAATCAAGAAAGTCCAAGGAAAATTGATGTATGTTTCTCTTTCCCCCTGATAAATGAAAACCATATGCCATTTTATTAATCGGTCACTGTGTCTTCCTACTGTAAATACAACTTTAGAAAGTAAAAAAAATACGATTCTCATACTGCATGAGATGGCGAAATTGATACATCTTTCCAAATACAACATTAGTGAGTGATGAGAACATTTTGGGGAGATTTTTTTTGGCATTTCAGAGTAAAAAGGTAGATAATAGATATCATTGATAATAGTAAATGGTCTTTCCAATAAAGAAAATAACTATAAGTAAATTGTGCATATAGAGTTTACAGTTCTATTTTTGTAATTCTTAAATTTGTAGTCTCCAAATAGTCTGTCTTAGAGGAAAATTATTGCATGAAAGGATGTTGTATTTGAAGAGAGATGAAACTGACTCATCATAAGCATATCAAATAGCTCAATGGACATAAAACATGGG

mRNA sequence

CTCGGAATTGGGTTGAAATTTCAACCCTTCTCTATTGATTAACATAGAGGAAAAGGGAAAAAAAAATGGTAGACCTGAAGGGAGTGAATGGTAATAGGTCCGAGTTTGTGCGAGCCGGTAACAGCGAAACCGTTGAGCTTCAATGTTCTACTTTTTTGTTGTTGCCTTTCCCTTACTTTACTCATTCCTTCCTTCCCCATTCTTCTTCTCCTCAAAAACCCACATTCAAGAACCCAATTTCACCCCCAAATTGATGCCCAAATATGTTCAATCTTGAAGATGAGTTCATAATCCAACCTGGGGTTTCATGGTTAATCTGGATTCAGCTTCTCGTCATCATCCTCATCTTCGCCCTTTACTGTCTCAGCATCTTCGCTGTTGATTTCTCCACTACCAATACCCACAGCGGATCCACTGCCGCCATTGCTTCCTCTTCTTCTACTCGGCTCGTTTCTGAAATTGCTCAAAAGGGCAAGAATCTTTCCAAGCAGAACATCAGAATCGGCTCTAATCCGTCGCGGAATGCTCAGGTGAATATTGAGCAAAGCATCAGCAGGGAGATAGCGACAAGTACGAGCAGCAGCAGAATCGTGCAAGTCGGAGAAGACAACGCAGTAGGAGGGGAAGGCTCTCAAGAAACCAAGCAGCTAGATCTTCACCCTTGCAGTTATTTCAGGCTTGCCAAATCAGCTTTTCTCAGGTGTCTGGGGTTGGACTCTTCAACAGAGAATTCAGTCTCATCAGATGAAAGGCAAAGAAGGGAATCAAGAAAGTCCAAGGAAAATTGATGTATGTTTCTCTTTCCCCCTGATAAATGAAAACCATATGCCATTTTATTAATCGGTCACTGTGTCTTCCTACTGTAAATACAACTTTAGAAAGTAAAAAAAATACGATTCTCATACTGCATGAGATGGCGAAATTGATACATCTTTCCAAATACAACATTAGTGAGTGATGAGAACATTTTGGGGAGATTTTTTTTGGCATTTCAGAGTAAAAAGGTAGATAATAGATATCATTGATAATAGTAAATGGTCTTTCCAATAAAGAAAATAACTATAAGTAAATTGTGCATATAGAGTTTACAGTTCTATTTTTGTAATTCTTAAATTTGTAGTCTCCAAATAGTCTGTCTTAGAGGAAAATTATTGCATGAAAGGATGTTGTATTTGAAGAGAGATGAAACTGACTCATCATAAGCATATCAAATAGCTCAATGGACATAAAACATGGG

Coding sequence (CDS)

ATGTTCAATCTTGAAGATGAGTTCATAATCCAACCTGGGGTTTCATGGTTAATCTGGATTCAGCTTCTCGTCATCATCCTCATCTTCGCCCTTTACTGTCTCAGCATCTTCGCTGTTGATTTCTCCACTACCAATACCCACAGCGGATCCACTGCCGCCATTGCTTCCTCTTCTTCTACTCGGCTCGTTTCTGAAATTGCTCAAAAGGGCAAGAATCTTTCCAAGCAGAACATCAGAATCGGCTCTAATCCGTCGCGGAATGCTCAGGTGAATATTGAGCAAAGCATCAGCAGGGAGATAGCGACAAGTACGAGCAGCAGCAGAATCGTGCAAGTCGGAGAAGACAACGCAGTAGGAGGGGAAGGCTCTCAAGAAACCAAGCAGCTAGATCTTCACCCTTGCAGTTATTTCAGGCTTGCCAAATCAGCTTTTCTCAGGTGTCTGGGGTTGGACTCTTCAACAGAGAATTCAGTCTCATCAGATGAAAGGCAAAGAAGGGAATCAAGAAAGTCCAAGGAAAATTGA

Protein sequence

MFNLEDEFIIQPGVSWLIWIQLLVIILIFALYCLSIFAVDFSTTNTHSGSTAAIASSSSTRLVSEIAQKGKNLSKQNIRIGSNPSRNAQVNIEQSISREIATSTSSSRIVQVGEDNAVGGEGSQETKQLDLHPCSYFRLAKSAFLRCLGLDSSTENSVSSDERQRRESRKSKEN

Homology

[Close]

BLAST of Sed0027168 vs. NCBI nr
Match: XP_022971697.1 (uncharacterized protein LOC111470367 [Cucurbita maxima] >XP_022971698.1 uncharacterized protein LOC111470367 [Cucurbita maxima] >XP_022971699.1 uncharacterized protein LOC111470367 [Cucurbita maxima] >XP_022971700.1 uncharacterized protein LOC111470367 [Cucurbita maxima])

HSP 1 Score: 206.8 bits (525), Expect = 1.5e-49
Identity = 123/172 (71.51%), Postives = 142/172 (82.56%), Query Frame = 0


Query: 1   MFNLEDEFIIQPGVSWLIWIQLLVIILIFALYCLSIFAVDFSTTNTHSGSTAAIASSSST 60
           MFN EDE I++PGVSWLIWIQLLVIILIFALYCL++FAVDFS ++T S S+AAIASSS+T
Sbjct: 1   MFNFEDELILEPGVSWLIWIQLLVIILIFALYCLTVFAVDFSKSSTESNSSAAIASSSTT 60

Query: 61  RLVSEIAQKGKNLSKQNIRIGSNPSRNAQVNIEQSISREIATSTSSSRIVQVGEDNAVGG 120
           R V + A+KGKNL  QN RI SN  R AQV+ +QSI  EI TS++S R+ QV E   VGG
Sbjct: 61  RFVCDAARKGKNLPNQNFRIDSNRPRKAQVSKDQSIRGEI-TSSTSRRVTQVVEGAVVGG 120

Query: 121 EGSQETKQLDLHPCSYFRLAKSAFLRCLGLDSSTENSVSSDERQRRESRKSK 173
           +GSQETK +DLHPCSYFRLAKSAFLRCLGLDSSTE SV SDE Q +ESRKS+
Sbjct: 121 DGSQETK-VDLHPCSYFRLAKSAFLRCLGLDSSTEISV-SDEIQGQESRKSQ 169

[Close]

BLAST of Sed0027168 vs. NCBI nr
Match: XP_022948005.1 (uncharacterized protein LOC111451714 isoform X1 [Cucurbita moschata])

HSP 1 Score: 206.8 bits (525), Expect = 1.5e-49
Identity = 126/177 (71.19%), Postives = 140/177 (79.10%), Query Frame = 0


Query: 1   MFNLEDEFIIQPGVSWLIWIQLLVIILIFALYCLSIFAVDFSTTNTHSGSTAAIASSSST 60
           MFN EDE I+QP VSWLIWIQLL++IL+FALYCL+IFA+DFS  +T   STAAIASSSST
Sbjct: 1   MFNFEDELILQPRVSWLIWIQLLLLILLFALYCLTIFAIDFSKIDTVGNSTAAIASSSST 60

Query: 61  ---RLVSEIAQKGKNLSKQNIRIGSNPSRNAQVNIEQSISREIATSTSSSRIVQVGEDNA 120
              R VSEIA   KN+S  NIRI S+PSRNAQ NIEQS   EI  ST S RI Q GE + 
Sbjct: 61  SNSRFVSEIAHNHKNVSMHNIRIDSDPSRNAQANIEQSTRGEIVWST-SRRITQTGEGSV 120

Query: 121 VGGEGSQETKQLDLHPCSYFRLAKSAFLRCLGLDSSTENSVSSDERQRRESRKSKEN 175
           VGGEG +ETK L+LHPCSYFRLAKSAFLRCLGLDSSTENSV  +ERQR ES KSK +
Sbjct: 121 VGGEGCEETK-LELHPCSYFRLAKSAFLRCLGLDSSTENSV-PEERQRPESTKSKRS 174

[Close]

BLAST of Sed0027168 vs. NCBI nr
Match: KAG6605297.1 (hypothetical protein SDJN03_02614, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 206.5 bits (524), Expect = 1.9e-49
Identity = 125/177 (70.62%), Postives = 141/177 (79.66%), Query Frame = 0


Query: 1   MFNLEDEFIIQPGVSWLIWIQLLVIILIFALYCLSIFAVDFSTTNTHSGSTAAIASSSST 60
           MFN EDE IIQP VSWLIWIQLL++IL+FALYCL+IFA+DFS  +T   STAAIASSSST
Sbjct: 1   MFNFEDELIIQPRVSWLIWIQLLLLILLFALYCLTIFAIDFSKIDTVGNSTAAIASSSST 60

Query: 61  ---RLVSEIAQKGKNLSKQNIRIGSNPSRNAQVNIEQSISREIATSTSSSRIVQVGEDNA 120
              R VSEI+   KN+S  NIRI S+PSRNAQ NIEQS   EI +ST S RI Q GE + 
Sbjct: 61  SNSRFVSEISHNHKNVSMHNIRIDSDPSRNAQANIEQSTRGEIVSST-SRRITQTGEGSV 120

Query: 121 VGGEGSQETKQLDLHPCSYFRLAKSAFLRCLGLDSSTENSVSSDERQRRESRKSKEN 175
           VGGEG +ETK L+LHPCSYFRLAKSAFLRCLGLDSSTENSV  ++RQR ES KSK +
Sbjct: 121 VGGEGCEETK-LELHPCSYFRLAKSAFLRCLGLDSSTENSV-PEQRQRPESTKSKRS 174

[Close]

BLAST of Sed0027168 vs. NCBI nr
Match: XP_023534758.1 (uncharacterized protein LOC111796230 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 204.5 bits (519), Expect = 7.3e-49
Identity = 125/177 (70.62%), Postives = 139/177 (78.53%), Query Frame = 0


Query: 1   MFNLEDEFIIQPGVSWLIWIQLLVIILIFALYCLSIFAVDFSTTNTHSGSTAAIASSSST 60
           MFN EDE IIQP VSWLIWIQLL++IL+FA YCL+IFA+DFS  NT   STAAIASSSST
Sbjct: 1   MFNFEDELIIQPRVSWLIWIQLLLLILVFAFYCLTIFAIDFSKINTVGNSTAAIASSSST 60

Query: 61  ---RLVSEIAQKGKNLSKQNIRIGSNPSRNAQVNIEQSISREIATSTSSSRIVQVGEDNA 120
              R VSEIA   KN+S  NI I S+PSRNAQ +IEQS   EI +ST S RI Q GE + 
Sbjct: 61  STSRFVSEIAHNHKNVSMHNIWIDSDPSRNAQASIEQSTRGEIVSST-SRRITQTGEGSV 120

Query: 121 VGGEGSQETKQLDLHPCSYFRLAKSAFLRCLGLDSSTENSVSSDERQRRESRKSKEN 175
           VGGEG +ETK L+LHPCSYFRLAKSAFLRCLGLDSSTENSV  +ERQR ES KSK +
Sbjct: 121 VGGEGCEETK-LELHPCSYFRLAKSAFLRCLGLDSSTENSV-PEERQRPESTKSKRS 174

[Close]

BLAST of Sed0027168 vs. NCBI nr
Match: XP_022928064.1 (uncharacterized protein LOC111434961 [Cucurbita moschata] >XP_022928065.1 uncharacterized protein LOC111434961 [Cucurbita moschata] >XP_022928066.1 uncharacterized protein LOC111434961 [Cucurbita moschata] >XP_022928067.1 uncharacterized protein LOC111434961 [Cucurbita moschata] >KAG7011159.1 hypothetical protein SDJN02_27957 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 203.8 bits (517), Expect = 1.2e-48
Identity = 120/172 (69.77%), Postives = 141/172 (81.98%), Query Frame = 0


Query: 1   MFNLEDEFIIQPGVSWLIWIQLLVIILIFALYCLSIFAVDFSTTNTHSGSTAAIASSSST 60
           MFN EDE I++PGVSWLIWIQLLVIILIFALYCL++FAVDFS ++T   S+AA+ASSS++
Sbjct: 1   MFNFEDELILEPGVSWLIWIQLLVIILIFALYCLTVFAVDFSKSSTEINSSAAVASSSTS 60

Query: 61  RLVSEIAQKGKNLSKQNIRIGSNPSRNAQVNIEQSISREIATSTSSSRIVQVGEDNAVGG 120
           R V + A+KGKNL  QN RI SN  R  QV+ +QSI  EI TS++S R+ QV E   VGG
Sbjct: 61  RFVCDAARKGKNLPNQNFRIDSNRPRKTQVSKDQSIRGEI-TSSTSRRVTQVVEGAVVGG 120

Query: 121 EGSQETKQLDLHPCSYFRLAKSAFLRCLGLDSSTENSVSSDERQRRESRKSK 173
           +GSQETK +DLHPCSYFRLAKSAFLRCLGLDSSTE SV SDE QR+ESRKS+
Sbjct: 121 DGSQETK-VDLHPCSYFRLAKSAFLRCLGLDSSTEISV-SDEIQRQESRKSQ 169

[Close]

BLAST of Sed0027168 vs. ExPASy TrEMBL
Match: A0A6J1I2P0 (uncharacterized protein LOC111470367 OS=Cucurbita maxima OX=3661 GN=LOC111470367 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 7.1e-50
Identity = 123/172 (71.51%), Postives = 142/172 (82.56%), Query Frame = 0


Query: 1   MFNLEDEFIIQPGVSWLIWIQLLVIILIFALYCLSIFAVDFSTTNTHSGSTAAIASSSST 60
           MFN EDE I++PGVSWLIWIQLLVIILIFALYCL++FAVDFS ++T S S+AAIASSS+T
Sbjct: 1   MFNFEDELILEPGVSWLIWIQLLVIILIFALYCLTVFAVDFSKSSTESNSSAAIASSSTT 60

Query: 61  RLVSEIAQKGKNLSKQNIRIGSNPSRNAQVNIEQSISREIATSTSSSRIVQVGEDNAVGG 120
           R V + A+KGKNL  QN RI SN  R AQV+ +QSI  EI TS++S R+ QV E   VGG
Sbjct: 61  RFVCDAARKGKNLPNQNFRIDSNRPRKAQVSKDQSIRGEI-TSSTSRRVTQVVEGAVVGG 120

Query: 121 EGSQETKQLDLHPCSYFRLAKSAFLRCLGLDSSTENSVSSDERQRRESRKSK 173
           +GSQETK +DLHPCSYFRLAKSAFLRCLGLDSSTE SV SDE Q +ESRKS+
Sbjct: 121 DGSQETK-VDLHPCSYFRLAKSAFLRCLGLDSSTEISV-SDEIQGQESRKSQ 169

[Close]

BLAST of Sed0027168 vs. ExPASy TrEMBL
Match: A0A6J1G8H3 (uncharacterized protein LOC111451714 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451714 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 7.1e-50
Identity = 126/177 (71.19%), Postives = 140/177 (79.10%), Query Frame = 0


Query: 1   MFNLEDEFIIQPGVSWLIWIQLLVIILIFALYCLSIFAVDFSTTNTHSGSTAAIASSSST 60
           MFN EDE I+QP VSWLIWIQLL++IL+FALYCL+IFA+DFS  +T   STAAIASSSST
Sbjct: 1   MFNFEDELILQPRVSWLIWIQLLLLILLFALYCLTIFAIDFSKIDTVGNSTAAIASSSST 60

Query: 61  ---RLVSEIAQKGKNLSKQNIRIGSNPSRNAQVNIEQSISREIATSTSSSRIVQVGEDNA 120
              R VSEIA   KN+S  NIRI S+PSRNAQ NIEQS   EI  ST S RI Q GE + 
Sbjct: 61  SNSRFVSEIAHNHKNVSMHNIRIDSDPSRNAQANIEQSTRGEIVWST-SRRITQTGEGSV 120

Query: 121 VGGEGSQETKQLDLHPCSYFRLAKSAFLRCLGLDSSTENSVSSDERQRRESRKSKEN 175
           VGGEG +ETK L+LHPCSYFRLAKSAFLRCLGLDSSTENSV  +ERQR ES KSK +
Sbjct: 121 VGGEGCEETK-LELHPCSYFRLAKSAFLRCLGLDSSTENSV-PEERQRPESTKSKRS 174

[Close]

BLAST of Sed0027168 vs. ExPASy TrEMBL
Match: A0A6J1EJS6 (uncharacterized protein LOC111434961 OS=Cucurbita moschata OX=3662 GN=LOC111434961 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 6.0e-49
Identity = 120/172 (69.77%), Postives = 141/172 (81.98%), Query Frame = 0


Query: 1   MFNLEDEFIIQPGVSWLIWIQLLVIILIFALYCLSIFAVDFSTTNTHSGSTAAIASSSST 60
           MFN EDE I++PGVSWLIWIQLLVIILIFALYCL++FAVDFS ++T   S+AA+ASSS++
Sbjct: 1   MFNFEDELILEPGVSWLIWIQLLVIILIFALYCLTVFAVDFSKSSTEINSSAAVASSSTS 60

Query: 61  RLVSEIAQKGKNLSKQNIRIGSNPSRNAQVNIEQSISREIATSTSSSRIVQVGEDNAVGG 120
           R V + A+KGKNL  QN RI SN  R  QV+ +QSI  EI TS++S R+ QV E   VGG
Sbjct: 61  RFVCDAARKGKNLPNQNFRIDSNRPRKTQVSKDQSIRGEI-TSSTSRRVTQVVEGAVVGG 120

Query: 121 EGSQETKQLDLHPCSYFRLAKSAFLRCLGLDSSTENSVSSDERQRRESRKSK 173
           +GSQETK +DLHPCSYFRLAKSAFLRCLGLDSSTE SV SDE QR+ESRKS+
Sbjct: 121 DGSQETK-VDLHPCSYFRLAKSAFLRCLGLDSSTEISV-SDEIQRQESRKSQ 169

[Close]

BLAST of Sed0027168 vs. ExPASy TrEMBL
Match: A0A5A7TVH8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G004230 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.8e-48
Identity = 126/177 (71.19%), Postives = 141/177 (79.66%), Query Frame = 0


Query: 1   MFNLEDEFIIQPGVSWLIWIQLLVIILIFALYCLSIFAVDFSTTNTHS-GSTAAIASSSS 60
           MFN EDE IIQPG+SWLIWIQLLVI+L+F L CL+IFA+DFS ++T    STAAIASSSS
Sbjct: 1   MFNFEDELIIQPGISWLIWIQLLVILLLFFLCCLTIFAIDFSKSSTADFNSTAAIASSSS 60

Query: 61  -TRLVSEIAQKGKN-LSKQNIRIGSNPSRNAQVNIEQSISREIATSTSSSRIVQVGEDNA 120
            TR +S  A  GKN L   NIRIG NP RNAQV  +QS   EI TS+++ RI QVGE   
Sbjct: 61  TTRFLSHSAHNGKNILPNPNIRIGPNPPRNAQVANDQSTRGEI-TSSTNRRITQVGEGTV 120

Query: 121 VGGEGSQETKQLDLHPCSYFRLAKSAFLRCLGLDSSTENSVSSDERQRRESRKSKEN 175
           +GGEGSQETK LDLHPCSYFRLAKSAFLRCLGLDSS ENS+ SDERQR ESRKSKE+
Sbjct: 121 IGGEGSQETK-LDLHPCSYFRLAKSAFLRCLGLDSSNENSI-SDERQRNESRKSKES 174

[Close]

BLAST of Sed0027168 vs. ExPASy TrEMBL
Match: A0A1S3C6P8 (uncharacterized protein LOC103497467 OS=Cucumis melo OX=3656 GN=LOC103497467 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.8e-48
Identity = 126/177 (71.19%), Postives = 141/177 (79.66%), Query Frame = 0


Query: 1   MFNLEDEFIIQPGVSWLIWIQLLVIILIFALYCLSIFAVDFSTTNTHS-GSTAAIASSSS 60
           MFN EDE IIQPG+SWLIWIQLLVI+L+F L CL+IFA+DFS ++T    STAAIASSSS
Sbjct: 1   MFNFEDELIIQPGISWLIWIQLLVILLLFFLCCLTIFAIDFSKSSTADFNSTAAIASSSS 60

Query: 61  -TRLVSEIAQKGKN-LSKQNIRIGSNPSRNAQVNIEQSISREIATSTSSSRIVQVGEDNA 120
            TR +S  A  GKN L   NIRIG NP RNAQV  +QS   EI TS+++ RI QVGE   
Sbjct: 61  TTRFLSHSAHNGKNILPNPNIRIGPNPPRNAQVANDQSTRGEI-TSSTNRRITQVGEGTV 120

Query: 121 VGGEGSQETKQLDLHPCSYFRLAKSAFLRCLGLDSSTENSVSSDERQRRESRKSKEN 175
           +GGEGSQETK LDLHPCSYFRLAKSAFLRCLGLDSS ENS+ SDERQR ESRKSKE+
Sbjct: 121 IGGEGSQETK-LDLHPCSYFRLAKSAFLRCLGLDSSNENSI-SDERQRNESRKSKES 174

[Close]

BLAST of Sed0027168 vs. TAIR 10
Match: AT5G64880.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 62.8 bits (151), Expect = 3.2e-10
Identity = 59/164 (35.98%), Postives = 89/164 (54.27%), Query Frame = 0


Query: 14  VSWLIWIQLLVIILIFALYC-LSIFAVDFSTTNTHSGSTAAIASSSSTRLVSEIAQKGKN 73
           + WLIWIQ+LV +L+  L C + IF+ D    N++S S +  ++S S+     ++     
Sbjct: 17  IPWLIWIQMLVFVLLLLLLCVIGIFSFDI-VDNSYSSSDSVPSTSGSSLSKRFLSGNPIP 76

Query: 74  LSKQNIRIGSNPS--RNAQVNIEQSISREIATSTSSSRIVQVGEDNAVGGEGSQETKQLD 133
           +S   +    N S  ++ QV   QSI  EI T   + R+  V E+    GEGS E     
Sbjct: 77  ISHHGLGFSVNSSLVQSHQVGSSQSIKGEI-TPAVTRRVTTVTEE----GEGSLEKDSSH 136

Query: 134 L--HPCSYFRLAKSAFLRCLGLDSSTENSVSSDERQRRESRKSK 173
              HPC+ FRLA SAFL+C G+D STE    +++  R+ES+K +
Sbjct: 137 SLHHPCTLFRLAGSAFLKCFGIDRSTE---ETEDSLRQESKKER 171

The following BLAST results are available for this feature:

BLAST of Sed0027168 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022971697.1	1.5e-49	71.51	uncharacterized protein LOC111470367 [Cucurbita maxima] >XP_022971698.1 uncharac...	[more]
XP_022948005.1	1.5e-49	71.19	uncharacterized protein LOC111451714 isoform X1 [Cucurbita moschata]	[more]
KAG6605297.1	1.9e-49	70.62	hypothetical protein SDJN03_02614, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023534758.1	7.3e-49	70.62	uncharacterized protein LOC111796230 [Cucurbita pepo subsp. pepo]	[more]
XP_022928064.1	1.2e-48	69.77	uncharacterized protein LOC111434961 [Cucurbita moschata] >XP_022928065.1 unchar...	[more]

BLAST of Sed0027168 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0027168 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I2P0	7.1e-50	71.51	uncharacterized protein LOC111470367 OS=Cucurbita maxima OX=3661 GN=LOC111470367...	[more]
A0A6J1G8H3	7.1e-50	71.19	uncharacterized protein LOC111451714 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1EJS6	6.0e-49	69.77	uncharacterized protein LOC111434961 OS=Cucurbita moschata OX=3662 GN=LOC1114349...	[more]
A0A5A7TVH8	1.8e-48	71.19	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3C6P8	1.8e-48	71.19	uncharacterized protein LOC103497467 OS=Cucumis melo OX=3656 GN=LOC103497467 PE=...	[more]

BLAST of Sed0027168 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G64880.1	3.2e-10	35.98	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 158..174
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 152..174
None	No IPR available	PANTHER	PTHR35771	TRANSMEMBRANE PROTEIN-RELATED	coord: 1..167
None	No IPR available	PANTHER	PTHR35771:SF3	TRANSMEMBRANE PROTEIN	coord: 1..167

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0027168.1	Sed0027168.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane