Homology
BLAST of Sed0027165 vs. NCBI nr
Match:
XP_008444192.1 (PREDICTED: SWI/SNF complex subunit SWI3C [Cucumis melo] >TYK30001.1 SWI/SNF complex subunit SWI3C [Cucumis melo var. makuwa])
HSP 1 Score: 1333.9 bits (3451), Expect = 0.0e+00
Identity = 697/819 (85.10%), Postives = 748/819 (91.33%), Query Frame = 0
Query: 1 MPASPSFPSGSRGKWKKKKRDSQIGRRNSF------GTNKHDDEDEDEDL-GVEIDDMER 60
MP SPSFPSGSRGKW+KKKRDSQIGRRN++ GTN+HDD+DEDEDL E D+MER
Sbjct: 1 MPPSPSFPSGSRGKWRKKKRDSQIGRRNNYSNTYNNGTNRHDDDDEDEDLVAAENDEMER 60
Query: 61 D-IDDSEDPQTNTALPGSNSSLRETELLSEDQLRVSEFPLVVKRAVARPHSSVLAVVAME 120
D DDSEDPQ P NS+++ETELLS+D+LRVSEFP VVKRAV RPHSSVLAVVAME
Sbjct: 61 DNNDDSEDPQIGLH-PTPNSTIQETELLSDDKLRVSEFPQVVKRAVTRPHSSVLAVVAME 120
Query: 121 KANQYGQSKGLPGISLVLENVSYGQLQALSAVPSDCPALLDQERLEAGNAAYVISPPPIV 180
+ NQYG+SKG+PG SL+LENVSYGQLQALSA+P+D PALLDQER+EAGNAAYVI+PPPI+
Sbjct: 121 RTNQYGESKGVPGNSLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPPIM 180
Query: 181 EGCGVVKRFGSRVHVVPLHSDWFSPATVHRLERQVVPHFFSGKLPDCTPEKYMEIRNFVV 240
EG GVVKRFGSRVHVVP+HSDWFSPATVHRLERQVVPHFFSGKLPD TPEKYMEIRNFVV
Sbjct: 181 EGRGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVV 240
Query: 241 AKYMENPEKRVTVSECQGFVDGVSNEDLTRVVRFLDHWGIINYCAPTPSFEPWNSSTYLR 300
AKYMENPEKRVTVS+C+G VDGVSNEDLTR+VRFLDHWGIINYCAPTPS EPWNS++YLR
Sbjct: 241 AKYMENPEKRVTVSDCRGLVDGVSNEDLTRIVRFLDHWGIINYCAPTPSCEPWNSNSYLR 300
Query: 301 EDMNGEIHVPSAALKPIDSLIKFDKPKCSLKEADVYSESAFSCRDDNDGLCDLDSKIRER 360
EDMNGEIHVPSAALKPIDSL+KFDKPKC LK ADVY SA CRDD DGLCDLD++IRER
Sbjct: 301 EDMNGEIHVPSAALKPIDSLVKFDKPKCRLKAADVY--SALPCRDDIDGLCDLDNRIRER 360
Query: 361 LAENHCSSCSRSVPIAYYQSQKEVDVLLCSNCFHEGKYVAGHSSIDFLRVDTMEDYGELD 420
LAENHCSSCSRSVP+AYYQSQKEVDVLLCS+CFHEGKYVAGHSSIDFLRVD +DYGELD
Sbjct: 361 LAENHCSSCSRSVPVAYYQSQKEVDVLLCSDCFHEGKYVAGHSSIDFLRVDMAKDYGELD 420
Query: 421 SENWTHQETLLLLEAIELYNDNWNEITEHVGSKSKAQCIIHFLRLSVEDGLLDNVDVPGV 480
SENWT QETLLLLEAIELYN+NWNEITEHVGSKSKAQCIIHFLRLSVEDGLL+NVDVPGV
Sbjct: 421 SENWTDQETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVPGV 480
Query: 481 PLSSNSSNGEDNEKSRSNMNGNVAGSSSQDNKEMHDRLPFANSGNPVMALVAFLASAIGP 540
LSSN+S+G D+EKSRSNMNGNVAGSS+QDNKEMHDRLPFANSGNPVMALVAFLASAIGP
Sbjct: 481 SLSSNASHGGDSEKSRSNMNGNVAGSSTQDNKEMHDRLPFANSGNPVMALVAFLASAIGP 540
Query: 541 RVAASCAHASLATLSEDGAASSGSIFQMEGSVNANRTNVEITHGRDGGSYGELPNSVKPK 600
RVAASCAHASLA LSED ASSGSIF MEGSVNANR NV+ R+G SYGELPNS+ K
Sbjct: 541 RVAASCAHASLAALSEDSVASSGSIFHMEGSVNANRMNVDAKQAREGSSYGELPNSIDQK 600
Query: 601 DENRAETEVALISAERVKVAARGGLAAAATKAKLFADHEEREIQRLSANIINHQLKRLEL 660
DEN+AETE L+S+ERVKVAA+ GLAAAATKAKLFADHEEREIQRLSANIINHQLKRLEL
Sbjct: 601 DENKAETEATLLSSERVKVAAKAGLAAAATKAKLFADHEEREIQRLSANIINHQLKRLEL 660
Query: 661 KLKQFAEVETFLMKECEQVERTRQRLIAERARMLGVQFGPAGVSSPVSLPGVIPSM-VNN 720
KLKQFAEVETFLMKECEQVERTRQR +AERARMLGVQFGPAGV+ P SLPGVIPSM VNN
Sbjct: 661 KLKQFAEVETFLMKECEQVERTRQRFVAERARMLGVQFGPAGVTPPASLPGVIPSMVVNN 720
Query: 721 NGANNRPNMISPPPSQQPSVSGYSNN-QPLHPHMSYMPRQPVFGLGPRLPLSAIQQQQQH 780
+ N+RPNMI+PP S QPSVSGYSNN QPLHPHMSYMPRQP+FGLG RLPLSAIQQQQQ
Sbjct: 721 SNTNSRPNMIAPPAS-QPSVSGYSNNQQPLHPHMSYMPRQPMFGLGQRLPLSAIQQQQQQ 780
Query: 781 P--PSTTSSNAMFNGPSNAQPSLSHP-MRPVTGSSSGLG 807
PSTTSSNAMFNGPSNAQPSLSHP MRPVTGSSSGLG
Sbjct: 781 QQLPSTTSSNAMFNGPSNAQPSLSHPMMRPVTGSSSGLG 815
BLAST of Sed0027165 vs. NCBI nr
Match:
XP_004142633.1 (SWI/SNF complex subunit SWI3C [Cucumis sativus] >KGN54546.1 hypothetical protein Csa_012987 [Cucumis sativus])
HSP 1 Score: 1330.1 bits (3441), Expect = 0.0e+00
Identity = 696/819 (84.98%), Postives = 745/819 (90.96%), Query Frame = 0
Query: 1 MPASPSFPSGSRGKWKKKKRDSQIGRRNSF------GTNKHDDEDEDEDL-GVEIDDMER 60
MP SPSFPSGSRGKW+KKKRDSQIGRRN++ GTN+HDD+DEDEDL E D+MER
Sbjct: 1 MPPSPSFPSGSRGKWRKKKRDSQIGRRNNYSNTFNNGTNRHDDDDEDEDLVAAENDEMER 60
Query: 61 D-IDDSEDPQTNTALPGSNSSLRETELLSEDQLRVSEFPLVVKRAVARPHSSVLAVVAME 120
D DDSEDPQ P NS+++E ELLS+D+ RVSEFP VVKRAV RPHSSVLAVVAME
Sbjct: 61 DNNDDSEDPQIGLH-PTPNSTIQEPELLSDDKFRVSEFPQVVKRAVTRPHSSVLAVVAME 120
Query: 121 KANQYGQSKGLPGISLVLENVSYGQLQALSAVPSDCPALLDQERLEAGNAAYVISPPPIV 180
+ NQYG+SKG+PG SL+LENVSYGQLQALSA+P+D PALLDQER+EAGNAAYVI+PPPI+
Sbjct: 121 RTNQYGESKGVPGNSLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPPIM 180
Query: 181 EGCGVVKRFGSRVHVVPLHSDWFSPATVHRLERQVVPHFFSGKLPDCTPEKYMEIRNFVV 240
EG GVVKRFGSRVHVVP+HSDWFSPATVHRLERQVVPHFFSGKLPD TPEKYMEIRNFVV
Sbjct: 181 EGRGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVV 240
Query: 241 AKYMENPEKRVTVSECQGFVDGVSNEDLTRVVRFLDHWGIINYCAPTPSFEPWNSSTYLR 300
AKYMENPEKRVTVS+CQG VDGVSNEDLTR+VRFLDHWGIINYCAPTPS EPWNS++YLR
Sbjct: 241 AKYMENPEKRVTVSDCQGLVDGVSNEDLTRIVRFLDHWGIINYCAPTPSCEPWNSNSYLR 300
Query: 301 EDMNGEIHVPSAALKPIDSLIKFDKPKCSLKEADVYSESAFSCRDDNDGLCDLDSKIRER 360
EDMNGEIHVPSAALKPIDSL+KFDKPKC LK ADVY SA CRDD DGLCDLD++IRER
Sbjct: 301 EDMNGEIHVPSAALKPIDSLVKFDKPKCRLKAADVY--SALPCRDDIDGLCDLDNRIRER 360
Query: 361 LAENHCSSCSRSVPIAYYQSQKEVDVLLCSNCFHEGKYVAGHSSIDFLRVDTMEDYGELD 420
LAENHCSSCSRSVPIAYYQSQKEVDVLLCS+CFHEGKYVAGHSS+DFLRVD +DYGELD
Sbjct: 361 LAENHCSSCSRSVPIAYYQSQKEVDVLLCSDCFHEGKYVAGHSSVDFLRVDMAKDYGELD 420
Query: 421 SENWTHQETLLLLEAIELYNDNWNEITEHVGSKSKAQCIIHFLRLSVEDGLLDNVDVPGV 480
SENWT QETLLLLEAIELYN+NWNEITEHVGSKSKAQCIIHFLRLSVEDGLL+NVDVPGV
Sbjct: 421 SENWTDQETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVPGV 480
Query: 481 PLSSNSSNGEDNEKSRSNMNGNVAGSSSQDNKEMHDRLPFANSGNPVMALVAFLASAIGP 540
LSS++S+G D+EKSRSNMNGN+AGSSSQDNKEMHDRLPFANSGNPVMALVAFLASAIGP
Sbjct: 481 SLSSSASHGGDSEKSRSNMNGNIAGSSSQDNKEMHDRLPFANSGNPVMALVAFLASAIGP 540
Query: 541 RVAASCAHASLATLSEDGAASSGSIFQMEGSVNANRTNVEITHGRDGGSYGELPNSVKPK 600
RVAASCAHASLA LSED ASSGSIF MEGSVNANR NV+ R+G SYGELPNS K
Sbjct: 541 RVAASCAHASLAALSEDSVASSGSIFHMEGSVNANRMNVDAKQAREGSSYGELPNSTDRK 600
Query: 601 DENRAETEVALISAERVKVAARGGLAAAATKAKLFADHEEREIQRLSANIINHQLKRLEL 660
DEN+AETE L+S+ERVKVAA+ GLAAAATKAKLFADHEEREIQRLSANIINHQLKRLEL
Sbjct: 601 DENKAETEATLLSSERVKVAAKAGLAAAATKAKLFADHEEREIQRLSANIINHQLKRLEL 660
Query: 661 KLKQFAEVETFLMKECEQVERTRQRLIAERARMLGVQFGPAGVSSPVSLPGVIPSM-VNN 720
KLKQFAEVETFLMKECEQVERTRQR +AERARMLGVQFGPAGV+ P SLPGVIPSM VNN
Sbjct: 661 KLKQFAEVETFLMKECEQVERTRQRFVAERARMLGVQFGPAGVTPPASLPGVIPSMVVNN 720
Query: 721 NGANNRPNMISPPPSQQPSVSGYSNN-QPLHPHMSYMPRQPVFGLGPRLPLSAIQQQQQH 780
+ N+RPNMISPP S QPSVSGYSNN QPLHPHMSYMPRQP+FGLG RLPLSAIQQQQQ
Sbjct: 721 SNTNSRPNMISPPAS-QPSVSGYSNNQQPLHPHMSYMPRQPMFGLGQRLPLSAIQQQQQQ 780
Query: 781 P--PSTTSSNAMFNGPSNAQPSLSHP-MRPVTGSSSGLG 807
PSTTSSNAMFNGPSNAQPSLSHP MRPVTGSSSGLG
Sbjct: 781 QQLPSTTSSNAMFNGPSNAQPSLSHPMMRPVTGSSSGLG 815
BLAST of Sed0027165 vs. NCBI nr
Match:
XP_023524497.1 (SWI/SNF complex subunit SWI3C-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1324.3 bits (3426), Expect = 0.0e+00
Identity = 694/817 (84.94%), Postives = 746/817 (91.31%), Query Frame = 0
Query: 1 MPASPSFPSGSRGKWKKKKRDSQIGRRNSF------GTNKHDDEDEDEDLG-VEIDDMER 60
MPASPSFPSGSRGKWKKKKRD+QIGRRN++ G+NKHDD+DEDEDL VE ++MER
Sbjct: 1 MPASPSFPSGSRGKWKKKKRDTQIGRRNNYGNNNNNGSNKHDDDDEDEDLATVENEEMER 60
Query: 61 DIDDSEDPQTNTALPGSNSSLRETELLSEDQLRVSEFPLVVKRAVARPHSSVLAVVAMEK 120
D DDSEDPQ P NSSL+ETELLS+D++RVSEFP VVKRAV RPHSSVLAVVAME+
Sbjct: 61 DNDDSEDPQ-----PTPNSSLQETELLSDDKMRVSEFPQVVKRAVTRPHSSVLAVVAMER 120
Query: 121 ANQYGQSKGLPGISLVLENVSYGQLQALSAVPSDCPALLDQERLEAGNAAYVISPPPIVE 180
+ QSK L G L+LENVSYGQLQALSA+P+D PALLDQER+EAGNAAYVI+PP I+E
Sbjct: 121 ES---QSKVLSGNPLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPSIME 180
Query: 181 GCGVVKRFGSRVHVVPLHSDWFSPATVHRLERQVVPHFFSGKLPDCTPEKYMEIRNFVVA 240
GCGVVKRFGSRVHVVP+HSDWFSPATVHRLERQVVPHFFSGKLPD TPEKYMEIRNFVVA
Sbjct: 181 GCGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVA 240
Query: 241 KYMENPEKRVTVSECQGFVDGVSNEDLTRVVRFLDHWGIINYCAPTPSFEPWNSSTYLRE 300
KYMENPEKRVTVS+CQG V+GVSN+DLTR+VRFLDHWGIINYCAPTPS EPWN S+YLRE
Sbjct: 241 KYMENPEKRVTVSDCQGLVNGVSNDDLTRIVRFLDHWGIINYCAPTPSCEPWNRSSYLRE 300
Query: 301 DMNGEIHVPSAALKPIDSLIKFDKPKCSLKEADVYSESAFSCRDDNDGLCDLDSKIRERL 360
DMNGEIHVPSAALKPIDSLIKFDKPKC LK AD+Y SA SC DDND LCDLD++IRERL
Sbjct: 301 DMNGEIHVPSAALKPIDSLIKFDKPKCRLKAADIY--SARSCHDDNDDLCDLDNRIRERL 360
Query: 361 AENHCSSCSRSVPIAYYQSQKEVDVLLCSNCFHEGKYVAGHSSIDFLRVDTMEDYGELDS 420
AE+HCSSCSR+VPI YQSQKEVDVLLC++CFHEGKYVAGHSSIDFLRVD +DYGELDS
Sbjct: 361 AESHCSSCSRTVPIVCYQSQKEVDVLLCTDCFHEGKYVAGHSSIDFLRVDMTKDYGELDS 420
Query: 421 ENWTHQETLLLLEAIELYNDNWNEITEHVGSKSKAQCIIHFLRLSVEDGLLDNVDVPGVP 480
ENWT QETLLLLEAIELYN+NWNEITEHVGSKSKAQCIIHFLRLSVEDG+L+NVDVPGVP
Sbjct: 421 ENWTDQETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGILENVDVPGVP 480
Query: 481 LSSNSSNGEDNEKSRSNMNGNVAGSSSQDNKEMHDRLPFANSGNPVMALVAFLASAIGPR 540
LSSNSS+G+DNEKS SNMNGNVAGSSSQDNKEMHDRLPFANSGNPVMALVAFLASAIGPR
Sbjct: 481 LSSNSSHGKDNEKSHSNMNGNVAGSSSQDNKEMHDRLPFANSGNPVMALVAFLASAIGPR 540
Query: 541 VAASCAHASLATLSEDGAASSGSIFQMEGSVNANRTNVEITHGRDGGSYGELPNSVKPKD 600
VAASCAHASLA LSED AASSGSIFQ+EGSVN +RTNVE+THGRDGGSYG+LPNSVK KD
Sbjct: 541 VAASCAHASLAALSEDSAASSGSIFQVEGSVNPSRTNVEVTHGRDGGSYGKLPNSVKLKD 600
Query: 601 ENRAETEVALISAERVKVAARGGLAAAATKAKLFADHEEREIQRLSANIINHQLKRLELK 660
EN+AETEV L+SAERVKVAA+ GLAAAATKAKLFADHEEREIQRLSANIINHQLKRLELK
Sbjct: 601 ENKAETEVTLLSAERVKVAAKVGLAAAATKAKLFADHEEREIQRLSANIINHQLKRLELK 660
Query: 661 LKQFAEVETFLMKECEQVERTRQRLIAERARMLGVQFGPAGVSSPVSLPGVIPSMVNNNG 720
LKQFAEVETFLMKECEQVERT QR +AERARMLGVQFG AGVSSP SLPGVIP +VNNN
Sbjct: 661 LKQFAEVETFLMKECEQVERTGQRFVAERARMLGVQFGAAGVSSPASLPGVIPPVVNNNR 720
Query: 721 AN---NRPNMISPPPSQQPSVSGYSNNQPLHPHMSYMPRQPVFGLGPRLPLSAIQQQQQH 780
+ +RPN+ISPPPS QPSVSGY NNQPLHPHMSY+PRQ +FGLG RLPLSAIQQQQQ
Sbjct: 721 VSSPASRPNVISPPPS-QPSVSGYGNNQPLHPHMSYVPRQSMFGLGQRLPLSAIQQQQQQ 780
Query: 781 PPSTTSSNAMFNGPSNAQPSLSHP-MRPVTGSSSGLG 807
STTSSNAMFNGPSNAQ SLSHP MRPVTGSSSGLG
Sbjct: 781 LASTTSSNAMFNGPSNAQASLSHPMMRPVTGSSSGLG 806
BLAST of Sed0027165 vs. NCBI nr
Match:
KAG6591874.1 (SWI/SNF complex subunit SWI3C, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1323.1 bits (3423), Expect = 0.0e+00
Identity = 693/816 (84.93%), Postives = 743/816 (91.05%), Query Frame = 0
Query: 1 MPASPSFPSGSRGKWKKKKRDSQIGRRNSF------GTNKHDDEDEDEDL-GVEIDDMER 60
MPASPSFPSGSRGKW+KKKRDSQIGRRN+F G+NKH++EDEDEDL E ++MER
Sbjct: 1 MPASPSFPSGSRGKWRKKKRDSQIGRRNNFPNSNNNGSNKHEEEDEDEDLAAAENEEMER 60
Query: 61 D-IDDSEDPQTNTALPGSNSSLRETELLSEDQLRVSEFPLVVKRAVARPHSSVLAVVAME 120
D DDSEDPQ N NSSL+E ELLS+D++RVSEFP VVKRAV RPHSSVLAVVAME
Sbjct: 61 DNNDDSEDPQINLQ-SAPNSSLQEPELLSDDKVRVSEFPQVVKRAVTRPHSSVLAVVAME 120
Query: 121 KANQYGQSKGLPGISLVLENVSYGQLQALSAVPSDCPALLDQERLEAGNAAYVISPPPIV 180
+ANQ+G+SKGLPG SL+LENVSYGQLQALSA+P+D PALLDQER+EAGNAAYVI+PPPI+
Sbjct: 121 RANQFGESKGLPGNSLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPPIM 180
Query: 181 EGCGVVKRFGSRVHVVPLHSDWFSPATVHRLERQVVPHFFSGKLPDCTPEKYMEIRNFVV 240
EG GVVKRFGSRVHVVP+HSDWFSPATVHRLERQVVPHFFSGK PD TPE+YMEIRNFVV
Sbjct: 181 EGRGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKFPDRTPERYMEIRNFVV 240
Query: 241 AKYMENPEKRVTVSECQGFVDGVSNEDLTRVVRFLDHWGIINYCAPTPSFEPWNSSTYLR 300
AKYMENPEKRVTVS+ QG +DGVSNEDLTR+VRFLDHWGIINYCAP PS EPWNSS+YLR
Sbjct: 241 AKYMENPEKRVTVSDFQGLIDGVSNEDLTRIVRFLDHWGIINYCAPAPSCEPWNSSSYLR 300
Query: 301 EDMNGEIHVPSAALKPIDSLIKFDKPKCSLKEADVYSESAFSCRDDNDGLCDLDSKIRER 360
EDMNGEIHVPSAALKPIDSLIKFDKPKC LK +VY S C DDND LCDLD+KIRER
Sbjct: 301 EDMNGEIHVPSAALKPIDSLIKFDKPKCRLKANEVY--SILPCHDDNDDLCDLDNKIRER 360
Query: 361 LAENHCSSCSRSVPIAYYQSQKEVDVLLCSNCFHEGKYVAGHSSIDFLRVDTMEDYGELD 420
LAEN+CSSCSR VPIAYYQSQKEVDVLLCSNCF+EGKYVAGH+SIDFLRVD +DY ELD
Sbjct: 361 LAENYCSSCSRPVPIAYYQSQKEVDVLLCSNCFYEGKYVAGHASIDFLRVDMTKDYDELD 420
Query: 421 SENWTHQETLLLLEAIELYNDNWNEITEHVGSKSKAQCIIHFLRLSVEDGLLDNVDVPGV 480
SENWT QETLLLLEAIELYNDNWNEITEHVGSKSKAQCIIHFLRLSVEDGLL+N+DVPGV
Sbjct: 421 SENWTDQETLLLLEAIELYNDNWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENIDVPGV 480
Query: 481 PLSSNSSNGEDNEKSRSNMNGNVAGSSSQDNKEMHDRLPFANSGNPVMALVAFLASAIGP 540
LSSNSS+GEDNEKS SNMNGNVAGSSSQDNKEM DRLPFANS NPVMALVAFLASA+GP
Sbjct: 481 SLSSNSSHGEDNEKSHSNMNGNVAGSSSQDNKEMRDRLPFANSQNPVMALVAFLASAVGP 540
Query: 541 RVAASCAHASLATLSEDGAASSGSIFQMEGSVNANRTNVEITHGRDGGSYGELPNSVKPK 600
RVAASCAHASLA LSED ASSGSIFQ EGSVNANRTNV+ITHGRD GSYGELPNSV+ K
Sbjct: 541 RVAASCAHASLAALSEDSVASSGSIFQREGSVNANRTNVDITHGRDSGSYGELPNSVEQK 600
Query: 601 DENRAETEVALISAERVKVAARGGLAAAATKAKLFADHEEREIQRLSANIINHQLKRLEL 660
DEN+AE EV +S+ERVKVAA+ GLAAAATKAKLFADHEEREIQRLSANIINHQL+RLEL
Sbjct: 601 DENKAEPEVTQLSSERVKVAAKAGLAAAATKAKLFADHEEREIQRLSANIINHQLRRLEL 660
Query: 661 KLKQFAEVETFLMKECEQVERTRQRLIAERARMLGVQFG-PAGVSSPVSLPGVIPSMVNN 720
KLKQFAEVETFLMKECEQVERTRQRL+AERARMLG+QFG AGVSSP SLPGVIPSMVNN
Sbjct: 661 KLKQFAEVETFLMKECEQVERTRQRLVAERARMLGIQFGTAAGVSSPASLPGVIPSMVNN 720
Query: 721 NGANNRPNMISPPPSQQPSVSGYSNNQPLHPHMSYMPRQPVFGLGPRLPLSAIQQQQQHP 780
N N+R NMISPP S QPSVSGY+NNQPLHPHMSYMPRQ +FGLG RLPLSAIQQQQQ
Sbjct: 721 NNTNSRQNMISPPAS-QPSVSGYNNNQPLHPHMSYMPRQSMFGLGQRLPLSAIQQQQQQ- 780
Query: 781 PSTTSSNAMFNGPSNAQPSLSHP-MRPVTGSSSGLG 807
P+TTSSNAMFNGP+NAQPSLSHP MRPVTGSSSGLG
Sbjct: 781 PATTSSNAMFNGPTNAQPSLSHPMMRPVTGSSSGLG 811
BLAST of Sed0027165 vs. NCBI nr
Match:
KAG7024741.1 (SWI/SNF complex subunit SWI3C [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1323.1 bits (3423), Expect = 0.0e+00
Identity = 693/816 (84.93%), Postives = 743/816 (91.05%), Query Frame = 0
Query: 1 MPASPSFPSGSRGKWKKKKRDSQIGRRNSF------GTNKHDDEDEDEDL-GVEIDDMER 60
MPASPSFPSGSRGKW+KKKRDSQIGRRN+F G+NKH++EDEDEDL E ++MER
Sbjct: 1 MPASPSFPSGSRGKWRKKKRDSQIGRRNNFPNSNNIGSNKHEEEDEDEDLAAAENEEMER 60
Query: 61 D-IDDSEDPQTNTALPGSNSSLRETELLSEDQLRVSEFPLVVKRAVARPHSSVLAVVAME 120
D DDSEDPQ N NSSL+E ELLS+D++RVSEFP VVKRAV RPHSSVLAVVAME
Sbjct: 61 DNNDDSEDPQINLQ-SAPNSSLQEPELLSDDKVRVSEFPQVVKRAVTRPHSSVLAVVAME 120
Query: 121 KANQYGQSKGLPGISLVLENVSYGQLQALSAVPSDCPALLDQERLEAGNAAYVISPPPIV 180
+ANQ+G+SKGLPG SL+LENVSYGQLQALSA+P+D PALLDQER+EAGNAAYVI+PPPI+
Sbjct: 121 RANQFGESKGLPGNSLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPPIM 180
Query: 181 EGCGVVKRFGSRVHVVPLHSDWFSPATVHRLERQVVPHFFSGKLPDCTPEKYMEIRNFVV 240
EG GVVKRFGSRVHVVP+HSDWFSPATVHRLERQVVPHFFSGK PD TPE+YMEIRNFVV
Sbjct: 181 EGRGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKFPDRTPERYMEIRNFVV 240
Query: 241 AKYMENPEKRVTVSECQGFVDGVSNEDLTRVVRFLDHWGIINYCAPTPSFEPWNSSTYLR 300
AKYMENPEKRVTVS+ QG +DGVSNEDLTR+VRFLDHWGIINYCAP PS EPWNSS+YLR
Sbjct: 241 AKYMENPEKRVTVSDFQGLIDGVSNEDLTRIVRFLDHWGIINYCAPAPSCEPWNSSSYLR 300
Query: 301 EDMNGEIHVPSAALKPIDSLIKFDKPKCSLKEADVYSESAFSCRDDNDGLCDLDSKIRER 360
EDMNGEIHVPSAALKPIDSLIKFDKPKC LK +VY S C DDND LCDLD+KIRER
Sbjct: 301 EDMNGEIHVPSAALKPIDSLIKFDKPKCRLKANEVY--SILPCHDDNDDLCDLDNKIRER 360
Query: 361 LAENHCSSCSRSVPIAYYQSQKEVDVLLCSNCFHEGKYVAGHSSIDFLRVDTMEDYGELD 420
LAEN+CSSCSR VPIAYYQSQKEVDVLLCSNCF+EGKYVAGH+SIDFLRVD +DY ELD
Sbjct: 361 LAENYCSSCSRPVPIAYYQSQKEVDVLLCSNCFYEGKYVAGHASIDFLRVDMTKDYDELD 420
Query: 421 SENWTHQETLLLLEAIELYNDNWNEITEHVGSKSKAQCIIHFLRLSVEDGLLDNVDVPGV 480
SENWT QETLLLLEAIELYNDNWNEITEHVGSKSKAQCIIHFLRLSVEDGLL+N+DVPGV
Sbjct: 421 SENWTDQETLLLLEAIELYNDNWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENIDVPGV 480
Query: 481 PLSSNSSNGEDNEKSRSNMNGNVAGSSSQDNKEMHDRLPFANSGNPVMALVAFLASAIGP 540
LSSNSS+GEDNEKS SNMNGNVAGSSSQDNKEM DRLPFANS NPVMALVAFLASA+GP
Sbjct: 481 SLSSNSSHGEDNEKSHSNMNGNVAGSSSQDNKEMRDRLPFANSQNPVMALVAFLASAVGP 540
Query: 541 RVAASCAHASLATLSEDGAASSGSIFQMEGSVNANRTNVEITHGRDGGSYGELPNSVKPK 600
RVAASCAHASLA LSED ASSGSIFQ EGSVNANRTNV+ITHGRD GSYGELPNSV+ K
Sbjct: 541 RVAASCAHASLAALSEDSVASSGSIFQREGSVNANRTNVDITHGRDSGSYGELPNSVEQK 600
Query: 601 DENRAETEVALISAERVKVAARGGLAAAATKAKLFADHEEREIQRLSANIINHQLKRLEL 660
DEN+AE EV +S+ERVKVAA+ GLAAAATKAKLFADHEEREIQRLSANIINHQL+RLEL
Sbjct: 601 DENKAEPEVTQLSSERVKVAAKAGLAAAATKAKLFADHEEREIQRLSANIINHQLRRLEL 660
Query: 661 KLKQFAEVETFLMKECEQVERTRQRLIAERARMLGVQFG-PAGVSSPVSLPGVIPSMVNN 720
KLKQFAEVETFLMKECEQVERTRQRL+AERARMLG+QFG AGVSSP SLPGVIPSMVNN
Sbjct: 661 KLKQFAEVETFLMKECEQVERTRQRLVAERARMLGIQFGTAAGVSSPASLPGVIPSMVNN 720
Query: 721 NGANNRPNMISPPPSQQPSVSGYSNNQPLHPHMSYMPRQPVFGLGPRLPLSAIQQQQQHP 780
N N+R NMISPP S QPSVSGY+NNQPLHPHMSYMPRQ +FGLG RLPLSAIQQQQQ
Sbjct: 721 NNTNSRQNMISPPAS-QPSVSGYNNNQPLHPHMSYMPRQSMFGLGQRLPLSAIQQQQQQ- 780
Query: 781 PSTTSSNAMFNGPSNAQPSLSHP-MRPVTGSSSGLG 807
P+TTSSNAMFNGP+NAQPSLSHP MRPVTGSSSGLG
Sbjct: 781 PATTSSNAMFNGPTNAQPSLSHPMMRPVTGSSSGLG 811
BLAST of Sed0027165 vs. ExPASy Swiss-Prot
Match:
Q9XI07 (SWI/SNF complex subunit SWI3C OS=Arabidopsis thaliana OX=3702 GN=SWI3C PE=1 SV=1)
HSP 1 Score: 723.4 bits (1866), Expect = 2.8e-207
Identity = 442/842 (52.49%), Postives = 552/842 (65.56%), Query Frame = 0
Query: 1 MPASPSFPSGSRGKWKKKKRDSQIGRRNSFGTNKHDDEDEDEDLGVEIDDMERDIDDSED 60
MPAS RGKWK+KKR R + D E+EDE+ ++ D++++++
Sbjct: 1 MPAS----EDRRGKWKRKKRGGLSAARKP-KQEEEDMEEEDEENNNNNNEEMDDVENADE 60
Query: 61 PQTN---TALPGSNSSLRETELLSEDQLRVSEFPLVVKRAVARPHSSVLAVVAMEKANQY 120
Q N T PG L E++ + R+S+FP VVKR V RPH+SV+AVVA E+A
Sbjct: 61 LQQNGGATPDPG----LGIGEVVEDSGSRISDFPAVVKRVVIRPHASVMAVVAAERAGLI 120
Query: 121 GQSKGLPGISLVLENVSYGQLQALSAVPSDCPALLDQERLEAGNAAYVISPPPIVEGCGV 180
G+++G G LEN+S+GQLQALS VP+D LD ER + ++AYVISPPPI++G GV
Sbjct: 121 GETRG-QGSLPALENISFGQLQALSTVPADS---LDLERSDGSSSAYVISPPPIMDGEGV 180
Query: 181 VKRFGSRVHVVPLHSDWFSPATVHRLERQVVPHFFSGKLPDCTPEKYMEIRNFVVAKYME 240
VKRFG VHV+P+HSDWF+P TV RLERQVVP FFSGK P+ TPE YME RN +V+KY+E
Sbjct: 181 VKRFGDLVHVLPMHSDWFAPNTVDRLERQVVPQFFSGKSPNHTPESYMEFRNAIVSKYVE 240
Query: 241 NPEKRVTVSECQGFVDGVSNEDLTRVVRFLDHWGIINYCAPTPSFE-PWNSSTYLREDMN 300
NPEK +T+S+CQG VDGV ED RV RFLDHWGIINYCA S P + +RED N
Sbjct: 241 NPEKTLTISDCQGLVDGVDIEDFARVFRFLDHWGIINYCATAQSHPGPLRDVSDVREDTN 300
Query: 301 GEIHVPSAALKPIDSLIKFDKPKCSLKEADVYSESAFSCRDDNDGLCDLDSKIRERLAEN 360
GE++VPSAAL IDSLIKFDKP C K +VYS S S D+ DLD +IRE L ++
Sbjct: 301 GEVNVPSAALTSIDSLIKFDKPNCRHKGGEVYS-SLPSLDGDSP---DLDIRIREHLCDS 360
Query: 361 HCSSCSRSVPIAYYQSQKEVDVLLCSNCFHEGKYVAGHSSIDFLRVDTMEDYGELDSENW 420
HC+ CSR +P Y+QSQK+ D+LLC +CFH G++V GHS +DF+RVD M+ YG+ D +NW
Sbjct: 361 HCNHCSRPLPTVYFQSQKKGDILLCCDCFHHGRFVVGHSCLDFVRVDPMKFYGDQDGDNW 420
Query: 421 THQETLLLLEAIELYNDNWNEITEHVGSKSKAQCIIHFLRLSVEDGLLDNVDVPGVPLSS 480
T QETLLLLEA+ELYN+NW +I +HVGSKSKAQCI+HFLRL VEDGLLDNV+V GV +
Sbjct: 421 TDQETLLLLEAVELYNENWVQIADHVGSKSKAQCILHFLRLPVEDGLLDNVEVSGVTNTE 480
Query: 481 NSSNGEDNEKSRSNMNGNVAGSSSQDNKEMHDRLPFANSGNPVMALVAFLASAIGPRVAA 540
N +NG D++ + S NG++ G S Q + +LPF S NPVMALVAFLASA+GPRVAA
Sbjct: 481 NPTNGYDHKGTDS--NGDLPGYSEQ-GSDTEIKLPFVKSPNPVMALVAFLASAVGPRVAA 540
Query: 541 SCAHASLATLSEDGAASSGSIFQMEGSVNANRTNVEITHGRDGGSYGELPNSVKPKDENR 600
SCAH SL+ LSED S EG + ++ + + G++ K +N
Sbjct: 541 SCAHESLSVLSEDDRMKS------EGMQGKEASLLDGENQQQDGAH-------KTSSQNG 600
Query: 601 AETEVALISAERVKVAARGGLAAAATKAKLFADHEEREIQRLSANIINHQLKRLELKLKQ 660
AE + L ++V A R GL+AAATKAKLFADHEEREIQRLSANI+NHQLKR+ELKLKQ
Sbjct: 601 AEAQTPL-PQDKVMAAFRAGLSAAATKAKLFADHEEREIQRLSANIVNHQLKRMELKLKQ 660
Query: 661 FAEVETFLMKECEQVERTRQRLIAERARMLGVQFGPAGVSSPVSLPGVIPSMVNNNGANN 720
FAE+ET LMKECEQVE+TRQR AERARML +FG G SP + + M + G NN
Sbjct: 661 FAEIETLLMKECEQVEKTRQRFSAERARMLSARFGSPGGISPQT--NNLQGMSLSTGGNN 720
Query: 721 RPNMISPPPSQ-------QPS-VSGYSNNQPLHPHMSYMPR------------QPVFGLG 780
+++ Q QPS + G+SNN + M +M R Q F G
Sbjct: 721 INSLMHQQHQQQQASATSQPSIIPGFSNNPQVQAQMHFMARQQQQQQQQQQQQQQAFSFG 780
Query: 781 PRLPLSAIQQQQQHPPSTTSSNAMF-----NGPSNA------QPSLSHPM-RPVTGSSSG 807
PRLPL+AI Q + ST S N MF N P+ A QPS SHPM R TGS SG
Sbjct: 781 PRLPLNAI---QTNAGSTASPNVMFGNNQLNNPAAAGAASINQPSFSHPMVRSSTGSGSG 803
BLAST of Sed0027165 vs. ExPASy Swiss-Prot
Match:
Q53KK6 (SWI/SNF complex subunit SWI3C homolog OS=Oryza sativa subsp. japonica OX=39947 GN=SWI3C PE=1 SV=1)
HSP 1 Score: 599.7 bits (1545), Expect = 4.7e-170
Identity = 386/825 (46.79%), Postives = 499/825 (60.48%), Query Frame = 0
Query: 1 MPASPSFPSGSRGKWKKKKRDSQI----GRRNSFGTNKHDDEDEDEDLGVEIDDMERDID 60
MP S S SR KW+K KR+ R+S D D+ + V DD + +
Sbjct: 1 MPRKASSTSDSRLKWRKWKRNPTASPSPSNRSSAAAAAADHSDDSDSAAVNEDD-DSAVP 60
Query: 61 DSEDPQTNTALPGSNSSLRETELLSEDQLRVSEFPLVVKRAVARPHSSVLAVVAMEKANQ 120
+ D +T LRE E+L + VS FP+ +R V RPH SVLAV+A E++
Sbjct: 61 EDADDETLAGAEDPVLDLREAEVLPSAE-PVSAFPVATRRVVNRPHPSVLAVIAAERSAC 120
Query: 121 YGQSKGLPGISLVLENVSYGQLQALSAV-PSDCPALLDQERLEAGNAAYVISPPPIVEGC 180
G+ + VLEN+SYGQ Q LS V P D ++ + YV +PP ++EG
Sbjct: 121 AGEGSAAVAAAPVLENISYGQQQVLSGVLPDHASLATDTDK----PSTYVCTPPNLMEGH 180
Query: 181 GVVKRFGSRVHVVPLHSDWFSPATVHRLERQVVPHFFSGKLPDCTPEKYMEIRNFVVAKY 240
GV K+F R+HVVP HSDWFSP VHRLERQVVP FFSGK P TPEKYM +RN V+AKY
Sbjct: 181 GVTKQFQGRLHVVPKHSDWFSPGIVHRLERQVVPQFFSGKSPGNTPEKYMLLRNKVIAKY 240
Query: 241 MENPEKRVTVSECQGFVDGVSN-EDLTRVVRFLDHWGIINYCAPTPSFEPWNSST-YLRE 300
+ENP KR+ +ECQG V + DL+R+VRFLD WGIINY A +T LRE
Sbjct: 241 LENPSKRLAFAECQGLVANTAELYDLSRIVRFLDTWGIINYLASGSVHRGLRMATSLLRE 300
Query: 301 DMNGEIHVPSAALKPIDSLIKFDKPKCSLKEADVYSESAFSCRDDND-GLCDLDSKIRER 360
+ GE+ + +A LK ID LI FD+PKC+L+ D+ S ++ S D D GL +LD KIRER
Sbjct: 301 EPTGELQLLTAPLKSIDGLILFDRPKCNLQAEDISSLASNSEVVDFDAGLAELDGKIRER 360
Query: 361 LAENHCSSCSRSVPIAYYQSQKEVDVLLCSNCFHEGKYVAGHSSIDFLRVDTMEDYGELD 420
L+E+ CS C + + +YQS KE D+ LCS+CFH+ +Y+ GHSS+DF R+D D E D
Sbjct: 361 LSESSCSYCLQPLTSLHYQSLKEADIALCSDCFHDARYITGHSSLDFQRIDGDNDRSEND 420
Query: 421 SENWTHQETLLLLEAIELYNDNWNEITEHVGSKSKAQCIIHFLRLSVEDGLLDNVDVP-- 480
++WT QETLLLLE IE YNDNWN I EHVG+KSKAQCI HF+RL VEDGLL+N++VP
Sbjct: 421 GDSWTDQETLLLLEGIEKYNDNWNNIAEHVGTKSKAQCIYHFIRLPVEDGLLENIEVPDA 480
Query: 481 GVPLSSNSSNGEDNEKSRSNMNGNVAGSSSQDNKEMHDRLPFANSGNPVMALVAFLASAI 540
VP + +NG + + +GN+ DN +LPF NS NPVM+LV FLASA+
Sbjct: 481 SVPFRA-ETNGYPHLDCNGSTSGNLPQKIPPDN-----QLPFINSSNPVMSLVGFLASAM 540
Query: 541 GPRVAASCAHASLATLSEDGAASSGSIFQMEGSVNANRTNVEITHGRDGGSYGELPNSVK 600
GPRVAASCA A+L+ L+ D + S EG + D G PN
Sbjct: 541 GPRVAASCASAALSVLTVDDDSRVNS----EGICS------------DSRGQGPHPNF-- 600
Query: 601 PKDENRAETEVALISAERVKVAARGGLAAAATKAKLFADHEEREIQRLSANIINHQLKRL 660
+D N + + IS E+VK AA GL+AAATKAKLFAD EEREIQRL+A +INHQLKRL
Sbjct: 601 -RDHNGGVS--SSISPEKVKHAAMCGLSAAATKAKLFADQEEREIQRLTATVINHQLKRL 660
Query: 661 ELKLKQFAEVETFLMKECEQVERTRQRLIAERARMLGVQFGPAGVSSPVSLPGVIPSMVN 720
ELKLKQFAEVET L+KECEQVER RQR+ ++R R++ + G SLPG S ++
Sbjct: 661 ELKLKQFAEVETLLLKECEQVERIRQRIASDRVRIVSTRLASPG----NSLPGGSTSTMS 720
Query: 721 NNGANNRPNMISPPPS--QQPSVSGYSNNQPLHPH-----MSYMPRQPVFGLGPRLPLSA 780
+N + P + P S Q + ++NN H H + RQ + GPRLPLSA
Sbjct: 721 SNPMSMSPRPMGVPGSMPQSSMPAPFANNMQGHGHPQMAFLQQQQRQQMLSFGPRLPLSA 780
Query: 781 IQQQQQHPPSTTSSNAMFNG--PSNAQPSLSHPMRPVTGSSSGLG 807
IQ Q PS +SN MFN P++ P+ +R +G++S +G
Sbjct: 781 IQTQ----PSPQTSNIMFNPGMPNSVTPNHHQLLRSSSGNNSSVG 784
BLAST of Sed0027165 vs. ExPASy Swiss-Prot
Match:
P97496 (SWI/SNF complex subunit SMARCC1 OS=Mus musculus OX=10090 GN=Smarcc1 PE=1 SV=2)
HSP 1 Score: 178.7 bits (452), Expect = 2.6e-43
Identity = 199/745 (26.71%), Postives = 301/745 (40.40%), Query Frame = 0
Query: 187 VVPLHSDWFSPATVHRLERQVVPHFFSGKLPDCTPEKYMEIRNFVVAKYMENPEKRVTVS 246
++P ++ WF +H +ER+ +P FF+GK TPE Y+ RNF++ Y NP++ +T +
Sbjct: 449 IIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTST 508
Query: 247 ECQGFVDGVSNEDLTRVVR---FLDHWGIINYCA------------PTPSFEPWNSSTYL 306
C+ + G D+ V+R FL+ WG++NY PTP F L
Sbjct: 509 ACRRNLTG----DVCAVMRVHAFLEQWGLVNYQVDPESRPMAMGPPPTPHF------NVL 568
Query: 307 REDMNG--EIHVPSAALKPIDSLIKFDKPKCSLKEADVYSESAFSCRDDNDGL-CDLDSK 366
+ +G +H+ S + ++ F + K K D+ N GL D+ SK
Sbjct: 569 ADTPSGLVPLHLRSPQVPAAQQMLNFPE-KNKEKPIDL----------QNFGLRTDIYSK 628
Query: 367 IRERLAENHCSSCSRSVPIAYYQSQKEVDVLLCSNCFHEGKYVAGHSSIDFLRVDTMEDY 426
+ LA++ +S R
Sbjct: 629 --KTLAKSKGASAGR--------------------------------------------- 688
Query: 427 GELDSENWTHQETLLLLEAIELYNDNWNEITEHVGSKSKAQCIIHFLRLSVEDGLLDNVD 486
WT QETLLLLEA+E+Y D+WN+++EHVGS+++ +CI+HFLRL +ED L+N D
Sbjct: 689 ------EWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLENSD 748
Query: 487 VPGVPLSSNSSNGEDNEKSRSNMNGNVAGSSSQDNKEMHDRLPFANSGNPVMALVAFLAS 546
PL+ + +PF+ SGNPVM+ VAFLAS
Sbjct: 749 ASLGPLA-------------------------------YQPVPFSQSGNPVMSTVAFLAS 808
Query: 547 AIGPRVAASCAHASLATLS------------------EDGAASSGSI------------- 606
+ PRVA++ A A+L S ++ A +SG +
Sbjct: 809 VVDPRVASAAAKAALEEFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAG 868
Query: 607 ------FQMEGS-----------VNANRTNVEITHGRDGGSY---------------GEL 666
++EGS + ++ + D G ++
Sbjct: 869 TGPDEPEKLEGSEEEKMETDPDGQQPEKAENKVENESDEGDKIQDRENEKNTEKEQDSDV 928
Query: 667 PNSVKPK----DENRAETEVAL--------------ISAERVKVAARGGLAAAATKAKLF 726
VKP+ +EN+ T+ IS V AA LA+AATKAK
Sbjct: 929 SEDVKPEEKENEENKELTDTCKERESDAGKKKVEHEISEGNVATAAAAALASAATKAKHL 988
Query: 727 ADHEEREIQRLSANIINHQLKRLELKLKQFAEVETFLMKECEQVERTRQRLIAERARMLG 773
A EER+I+ L A ++ Q+K+LE+KL+ F E+ET + +E E +E+ RQ+L+ ER
Sbjct: 989 AAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHM 1048
BLAST of Sed0027165 vs. ExPASy Swiss-Prot
Match:
Q8VY05 (SWI/SNF complex subunit SWI3D OS=Arabidopsis thaliana OX=3702 GN=SWI3D PE=1 SV=3)
HSP 1 Score: 176.8 bits (447), Expect = 9.9e-43
Identity = 207/822 (25.18%), Postives = 302/822 (36.74%), Query Frame = 0
Query: 183 SRVHVVPLHSDWFSPATVHRLERQVVPHFFSGKLPDCTPEKYMEIRNFVVAKYMENPEKR 242
S VHVVP H WFS +H LE + +P FF+GKL T E Y EIRN+++ K+ NP +
Sbjct: 142 SNVHVVPNHCGWFSWEKIHPLEERSLPSFFNGKLEGRTSEVYREIRNWIMGKFHSNPNIQ 201
Query: 243 VTVSECQGFVDGVSNEDLTRVVRFLDHWGIINYCAPTPSFEPWNSSTYLREDMNGEIHVP 302
+ + + G +E V+ FLD+WG+IN+ P P + ST D G+
Sbjct: 202 IELKDLTELEVG-DSEAKQEVMEFLDYWGLINF-HPFPPTD--TGSTASDHDDLGDKE-- 261
Query: 303 SAALKPIDSLIKFDKPKCSLKEADVYSESAFSCRDDNDGL------CDLDSKIRERLAEN 362
++SL +F + + + F+ + GL D K E
Sbjct: 262 ----SLLNSLYRFQVDEAC---PPLVHKPRFTAQATPSGLFPDPMAADELLKQEGPAVEY 321
Query: 363 HCSSCSRSVPIAYYQSQKEVDVLLCSNCFHEGKYVAGHSSIDFLRVDTMEDYGELDSENW 422
HC+SCS Y K+ D LC+ CF+ GK+ + SS DF+ ++ E G + S W
Sbjct: 322 HCNSCSADCSRKRYHCPKQADFDLCTECFNSGKFSSDMSSSDFILMEPAEAPG-VGSGKW 381
Query: 423 THQETLLLLEAIELYNDNWNEITEHVGSKSKAQCIIHFLRLSVEDGLLDNVDVPGVPLSS 482
T QETLLLLEA+E++ +NWNEI EHV +K+KAQC++HFL++ +ED LD +D P+S
Sbjct: 382 TDQETLLLLEALEIFKENWNEIAEHVATKTKAQCMLHFLQMPIEDAFLDQIDYKD-PISK 441
Query: 483 NSSN-----------------------------------GEDNEKSRSNMNGNVAGSSSQ 542
++++ ED + + + + G +S+
Sbjct: 442 DTTDLAVSKDDNSVLKDAPEEAENKKRVDEDETMKEVPEPEDGNEEKVSQESSKPGDASE 501
Query: 543 DNKEM--------------------------------------HDRLP-----FANSGNP 602
+ EM H P FA+ GNP
Sbjct: 502 ETNEMEAEQKTPKLETAIEERCKDEADENIALKALTEAFEDVGHSSTPEASFSFADLGNP 561
Query: 603 VMALVAFLASAIGPRVAASCAHASLATL----------------------SEDGAASSGS 662
VM L AFL G VA + A AS+ +L +D S
Sbjct: 562 VMGLAAFLVRLAGSDVATASARASIKSLHSNSGMLLATRHCYILEDPPDNKKDPTKSKSC 621
Query: 663 IFQMEG---------------------SVNAN-----------RTNVEITHGRDGGSYGE 722
EG S+N++ T ++ + GS E
Sbjct: 622 SADAEGNDDNSHKDDQPEEKSKKAEEVSLNSDDREMPDTDTGKETQDSVSEEKQPGSRTE 681
Query: 723 -------------------LPNSVKP--------------------KDENRAETE----- 726
NS KP KD N+ +E
Sbjct: 682 NSTTKLDAVQEKRSSKPVTTDNSEKPVDIICPSQDKCSGKELQEPLKDGNKLSSENKDAS 741
BLAST of Sed0027165 vs. ExPASy Swiss-Prot
Match:
Q92922 (SWI/SNF complex subunit SMARCC1 OS=Homo sapiens OX=9606 GN=SMARCC1 PE=1 SV=3)
HSP 1 Score: 175.3 bits (443), Expect = 2.9e-42
Identity = 194/715 (27.13%), Postives = 285/715 (39.86%), Query Frame = 0
Query: 187 VVPLHSDWFSPATVHRLERQVVPHFFSGKLPDCTPEKYMEIRNFVVAKYMENPEKRVTVS 246
++P ++ WF +H +ER+ +P FF+GK TPE Y+ RNF++ Y NP++ +T +
Sbjct: 450 IIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTST 509
Query: 247 ECQGFVDGVSNEDLTRVVR---FLDHWGIINYCA------------PTPSFEPWNSSTYL 306
C+ + G D+ V+R FL+ WG++NY PTP F L
Sbjct: 510 ACRRNLTG----DVCAVMRVHAFLEQWGLVNYQVDPESRPMAMGPPPTPHF------NVL 569
Query: 307 REDMNG--EIHVPSAALKPIDSLIKFDKPKCSLKEADVYSESAFSCRDDNDGL-CDLDSK 366
+ +G +H+ S + ++ F + K K D+ N GL D+ SK
Sbjct: 570 ADTPSGLVPLHLRSPQVPAAQQMLNFPE-KNKEKPVDL----------QNFGLRTDIYSK 629
Query: 367 IRERLAENHCSSCSRSVPIAYYQSQKEVDVLLCSNCFHEGKYVAGHSSIDFLRVDTMEDY 426
+ LA++ +S R
Sbjct: 630 --KTLAKSKGASAGR--------------------------------------------- 689
Query: 427 GELDSENWTHQETLLLLEAIELYNDNWNEITEHVGSKSKAQCIIHFLRLSVEDGLLDNVD 486
WT QETLLLLEA+E+Y D+WN+++EHVGS+++ +CI+HFLRL +ED L+N D
Sbjct: 690 ------EWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLENSD 749
Query: 487 VPGVPLSSNSSNGEDNEKSRSNMNGNVAGSSSQDNKEMHDRLPFANSGNPVMALVAFLAS 546
PL+ + +PF+ SGNPVM+ VAFLAS
Sbjct: 750 ASLGPLA-------------------------------YQPVPFSQSGNPVMSTVAFLAS 809
Query: 547 AIGPRVAASCAHASLATLS------------------EDGAASSGSI---FQMEGSVNA- 606
+ PRVA++ A A+L S ++ A +SG + + +E S A
Sbjct: 810 VVDPRVASAAAKAALEEFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAG 869
Query: 607 ------------------------------NRTNVEITHGRDGGSYGELPNSVKPKD--- 666
N+ E G NS K +D
Sbjct: 870 TGPDEPEKLEGAEEEKMEADPDGQQPEKAENKVENETDEGDKAQDGENEKNSEKEQDSEV 929
Query: 667 ------------ENRAETEVAL--------------ISAERVKVAARGGLAAAATKAKLF 726
EN+ T+ IS V AA LA+AATKAK
Sbjct: 930 SEDTKSEEKETEENKELTDTCKERESDTGKKKVEHEISEGNVATAAAAALASAATKAKHL 989
Query: 727 ADHEEREIQRLSANIINHQLKRLELKLKQFAEVETFLMKECEQVERTRQRLIAERARMLG 786
A EER+I+ L A ++ Q+K+LE+KL+ F E+ET + +E E +E+ RQ+L+ ER
Sbjct: 990 AAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHM 1034
Query: 787 VQFGPAGVSSPVSLPGVIPSMVNNNGANNRPNMISPPPSQQPSVSGYSNNQPL----HPH 799
Q A + + + +G N P Q SG PL HP
Sbjct: 1050 EQLKYAELRARQQME------QQQHGQN---------PQQAHQHSGGPGLAPLGAAGHPG 1034
BLAST of Sed0027165 vs. ExPASy TrEMBL
Match:
A0A5D3E339 (SWI/SNF complex subunit SWI3C OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold587G00020 PE=4 SV=1)
HSP 1 Score: 1333.9 bits (3451), Expect = 0.0e+00
Identity = 697/819 (85.10%), Postives = 748/819 (91.33%), Query Frame = 0
Query: 1 MPASPSFPSGSRGKWKKKKRDSQIGRRNSF------GTNKHDDEDEDEDL-GVEIDDMER 60
MP SPSFPSGSRGKW+KKKRDSQIGRRN++ GTN+HDD+DEDEDL E D+MER
Sbjct: 1 MPPSPSFPSGSRGKWRKKKRDSQIGRRNNYSNTYNNGTNRHDDDDEDEDLVAAENDEMER 60
Query: 61 D-IDDSEDPQTNTALPGSNSSLRETELLSEDQLRVSEFPLVVKRAVARPHSSVLAVVAME 120
D DDSEDPQ P NS+++ETELLS+D+LRVSEFP VVKRAV RPHSSVLAVVAME
Sbjct: 61 DNNDDSEDPQIGLH-PTPNSTIQETELLSDDKLRVSEFPQVVKRAVTRPHSSVLAVVAME 120
Query: 121 KANQYGQSKGLPGISLVLENVSYGQLQALSAVPSDCPALLDQERLEAGNAAYVISPPPIV 180
+ NQYG+SKG+PG SL+LENVSYGQLQALSA+P+D PALLDQER+EAGNAAYVI+PPPI+
Sbjct: 121 RTNQYGESKGVPGNSLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPPIM 180
Query: 181 EGCGVVKRFGSRVHVVPLHSDWFSPATVHRLERQVVPHFFSGKLPDCTPEKYMEIRNFVV 240
EG GVVKRFGSRVHVVP+HSDWFSPATVHRLERQVVPHFFSGKLPD TPEKYMEIRNFVV
Sbjct: 181 EGRGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVV 240
Query: 241 AKYMENPEKRVTVSECQGFVDGVSNEDLTRVVRFLDHWGIINYCAPTPSFEPWNSSTYLR 300
AKYMENPEKRVTVS+C+G VDGVSNEDLTR+VRFLDHWGIINYCAPTPS EPWNS++YLR
Sbjct: 241 AKYMENPEKRVTVSDCRGLVDGVSNEDLTRIVRFLDHWGIINYCAPTPSCEPWNSNSYLR 300
Query: 301 EDMNGEIHVPSAALKPIDSLIKFDKPKCSLKEADVYSESAFSCRDDNDGLCDLDSKIRER 360
EDMNGEIHVPSAALKPIDSL+KFDKPKC LK ADVY SA CRDD DGLCDLD++IRER
Sbjct: 301 EDMNGEIHVPSAALKPIDSLVKFDKPKCRLKAADVY--SALPCRDDIDGLCDLDNRIRER 360
Query: 361 LAENHCSSCSRSVPIAYYQSQKEVDVLLCSNCFHEGKYVAGHSSIDFLRVDTMEDYGELD 420
LAENHCSSCSRSVP+AYYQSQKEVDVLLCS+CFHEGKYVAGHSSIDFLRVD +DYGELD
Sbjct: 361 LAENHCSSCSRSVPVAYYQSQKEVDVLLCSDCFHEGKYVAGHSSIDFLRVDMAKDYGELD 420
Query: 421 SENWTHQETLLLLEAIELYNDNWNEITEHVGSKSKAQCIIHFLRLSVEDGLLDNVDVPGV 480
SENWT QETLLLLEAIELYN+NWNEITEHVGSKSKAQCIIHFLRLSVEDGLL+NVDVPGV
Sbjct: 421 SENWTDQETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVPGV 480
Query: 481 PLSSNSSNGEDNEKSRSNMNGNVAGSSSQDNKEMHDRLPFANSGNPVMALVAFLASAIGP 540
LSSN+S+G D+EKSRSNMNGNVAGSS+QDNKEMHDRLPFANSGNPVMALVAFLASAIGP
Sbjct: 481 SLSSNASHGGDSEKSRSNMNGNVAGSSTQDNKEMHDRLPFANSGNPVMALVAFLASAIGP 540
Query: 541 RVAASCAHASLATLSEDGAASSGSIFQMEGSVNANRTNVEITHGRDGGSYGELPNSVKPK 600
RVAASCAHASLA LSED ASSGSIF MEGSVNANR NV+ R+G SYGELPNS+ K
Sbjct: 541 RVAASCAHASLAALSEDSVASSGSIFHMEGSVNANRMNVDAKQAREGSSYGELPNSIDQK 600
Query: 601 DENRAETEVALISAERVKVAARGGLAAAATKAKLFADHEEREIQRLSANIINHQLKRLEL 660
DEN+AETE L+S+ERVKVAA+ GLAAAATKAKLFADHEEREIQRLSANIINHQLKRLEL
Sbjct: 601 DENKAETEATLLSSERVKVAAKAGLAAAATKAKLFADHEEREIQRLSANIINHQLKRLEL 660
Query: 661 KLKQFAEVETFLMKECEQVERTRQRLIAERARMLGVQFGPAGVSSPVSLPGVIPSM-VNN 720
KLKQFAEVETFLMKECEQVERTRQR +AERARMLGVQFGPAGV+ P SLPGVIPSM VNN
Sbjct: 661 KLKQFAEVETFLMKECEQVERTRQRFVAERARMLGVQFGPAGVTPPASLPGVIPSMVVNN 720
Query: 721 NGANNRPNMISPPPSQQPSVSGYSNN-QPLHPHMSYMPRQPVFGLGPRLPLSAIQQQQQH 780
+ N+RPNMI+PP S QPSVSGYSNN QPLHPHMSYMPRQP+FGLG RLPLSAIQQQQQ
Sbjct: 721 SNTNSRPNMIAPPAS-QPSVSGYSNNQQPLHPHMSYMPRQPMFGLGQRLPLSAIQQQQQQ 780
Query: 781 P--PSTTSSNAMFNGPSNAQPSLSHP-MRPVTGSSSGLG 807
PSTTSSNAMFNGPSNAQPSLSHP MRPVTGSSSGLG
Sbjct: 781 QQLPSTTSSNAMFNGPSNAQPSLSHPMMRPVTGSSSGLG 815
BLAST of Sed0027165 vs. ExPASy TrEMBL
Match:
A0A1S3B9W1 (SWI/SNF complex subunit SWI3C OS=Cucumis melo OX=3656 GN=LOC103487606 PE=4 SV=1)
HSP 1 Score: 1333.9 bits (3451), Expect = 0.0e+00
Identity = 697/819 (85.10%), Postives = 748/819 (91.33%), Query Frame = 0
Query: 1 MPASPSFPSGSRGKWKKKKRDSQIGRRNSF------GTNKHDDEDEDEDL-GVEIDDMER 60
MP SPSFPSGSRGKW+KKKRDSQIGRRN++ GTN+HDD+DEDEDL E D+MER
Sbjct: 1 MPPSPSFPSGSRGKWRKKKRDSQIGRRNNYSNTYNNGTNRHDDDDEDEDLVAAENDEMER 60
Query: 61 D-IDDSEDPQTNTALPGSNSSLRETELLSEDQLRVSEFPLVVKRAVARPHSSVLAVVAME 120
D DDSEDPQ P NS+++ETELLS+D+LRVSEFP VVKRAV RPHSSVLAVVAME
Sbjct: 61 DNNDDSEDPQIGLH-PTPNSTIQETELLSDDKLRVSEFPQVVKRAVTRPHSSVLAVVAME 120
Query: 121 KANQYGQSKGLPGISLVLENVSYGQLQALSAVPSDCPALLDQERLEAGNAAYVISPPPIV 180
+ NQYG+SKG+PG SL+LENVSYGQLQALSA+P+D PALLDQER+EAGNAAYVI+PPPI+
Sbjct: 121 RTNQYGESKGVPGNSLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPPIM 180
Query: 181 EGCGVVKRFGSRVHVVPLHSDWFSPATVHRLERQVVPHFFSGKLPDCTPEKYMEIRNFVV 240
EG GVVKRFGSRVHVVP+HSDWFSPATVHRLERQVVPHFFSGKLPD TPEKYMEIRNFVV
Sbjct: 181 EGRGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVV 240
Query: 241 AKYMENPEKRVTVSECQGFVDGVSNEDLTRVVRFLDHWGIINYCAPTPSFEPWNSSTYLR 300
AKYMENPEKRVTVS+C+G VDGVSNEDLTR+VRFLDHWGIINYCAPTPS EPWNS++YLR
Sbjct: 241 AKYMENPEKRVTVSDCRGLVDGVSNEDLTRIVRFLDHWGIINYCAPTPSCEPWNSNSYLR 300
Query: 301 EDMNGEIHVPSAALKPIDSLIKFDKPKCSLKEADVYSESAFSCRDDNDGLCDLDSKIRER 360
EDMNGEIHVPSAALKPIDSL+KFDKPKC LK ADVY SA CRDD DGLCDLD++IRER
Sbjct: 301 EDMNGEIHVPSAALKPIDSLVKFDKPKCRLKAADVY--SALPCRDDIDGLCDLDNRIRER 360
Query: 361 LAENHCSSCSRSVPIAYYQSQKEVDVLLCSNCFHEGKYVAGHSSIDFLRVDTMEDYGELD 420
LAENHCSSCSRSVP+AYYQSQKEVDVLLCS+CFHEGKYVAGHSSIDFLRVD +DYGELD
Sbjct: 361 LAENHCSSCSRSVPVAYYQSQKEVDVLLCSDCFHEGKYVAGHSSIDFLRVDMAKDYGELD 420
Query: 421 SENWTHQETLLLLEAIELYNDNWNEITEHVGSKSKAQCIIHFLRLSVEDGLLDNVDVPGV 480
SENWT QETLLLLEAIELYN+NWNEITEHVGSKSKAQCIIHFLRLSVEDGLL+NVDVPGV
Sbjct: 421 SENWTDQETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVPGV 480
Query: 481 PLSSNSSNGEDNEKSRSNMNGNVAGSSSQDNKEMHDRLPFANSGNPVMALVAFLASAIGP 540
LSSN+S+G D+EKSRSNMNGNVAGSS+QDNKEMHDRLPFANSGNPVMALVAFLASAIGP
Sbjct: 481 SLSSNASHGGDSEKSRSNMNGNVAGSSTQDNKEMHDRLPFANSGNPVMALVAFLASAIGP 540
Query: 541 RVAASCAHASLATLSEDGAASSGSIFQMEGSVNANRTNVEITHGRDGGSYGELPNSVKPK 600
RVAASCAHASLA LSED ASSGSIF MEGSVNANR NV+ R+G SYGELPNS+ K
Sbjct: 541 RVAASCAHASLAALSEDSVASSGSIFHMEGSVNANRMNVDAKQAREGSSYGELPNSIDQK 600
Query: 601 DENRAETEVALISAERVKVAARGGLAAAATKAKLFADHEEREIQRLSANIINHQLKRLEL 660
DEN+AETE L+S+ERVKVAA+ GLAAAATKAKLFADHEEREIQRLSANIINHQLKRLEL
Sbjct: 601 DENKAETEATLLSSERVKVAAKAGLAAAATKAKLFADHEEREIQRLSANIINHQLKRLEL 660
Query: 661 KLKQFAEVETFLMKECEQVERTRQRLIAERARMLGVQFGPAGVSSPVSLPGVIPSM-VNN 720
KLKQFAEVETFLMKECEQVERTRQR +AERARMLGVQFGPAGV+ P SLPGVIPSM VNN
Sbjct: 661 KLKQFAEVETFLMKECEQVERTRQRFVAERARMLGVQFGPAGVTPPASLPGVIPSMVVNN 720
Query: 721 NGANNRPNMISPPPSQQPSVSGYSNN-QPLHPHMSYMPRQPVFGLGPRLPLSAIQQQQQH 780
+ N+RPNMI+PP S QPSVSGYSNN QPLHPHMSYMPRQP+FGLG RLPLSAIQQQQQ
Sbjct: 721 SNTNSRPNMIAPPAS-QPSVSGYSNNQQPLHPHMSYMPRQPMFGLGQRLPLSAIQQQQQQ 780
Query: 781 P--PSTTSSNAMFNGPSNAQPSLSHP-MRPVTGSSSGLG 807
PSTTSSNAMFNGPSNAQPSLSHP MRPVTGSSSGLG
Sbjct: 781 QQLPSTTSSNAMFNGPSNAQPSLSHPMMRPVTGSSSGLG 815
BLAST of Sed0027165 vs. ExPASy TrEMBL
Match:
A0A0A0L361 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G361800 PE=4 SV=1)
HSP 1 Score: 1330.1 bits (3441), Expect = 0.0e+00
Identity = 696/819 (84.98%), Postives = 745/819 (90.96%), Query Frame = 0
Query: 1 MPASPSFPSGSRGKWKKKKRDSQIGRRNSF------GTNKHDDEDEDEDL-GVEIDDMER 60
MP SPSFPSGSRGKW+KKKRDSQIGRRN++ GTN+HDD+DEDEDL E D+MER
Sbjct: 1 MPPSPSFPSGSRGKWRKKKRDSQIGRRNNYSNTFNNGTNRHDDDDEDEDLVAAENDEMER 60
Query: 61 D-IDDSEDPQTNTALPGSNSSLRETELLSEDQLRVSEFPLVVKRAVARPHSSVLAVVAME 120
D DDSEDPQ P NS+++E ELLS+D+ RVSEFP VVKRAV RPHSSVLAVVAME
Sbjct: 61 DNNDDSEDPQIGLH-PTPNSTIQEPELLSDDKFRVSEFPQVVKRAVTRPHSSVLAVVAME 120
Query: 121 KANQYGQSKGLPGISLVLENVSYGQLQALSAVPSDCPALLDQERLEAGNAAYVISPPPIV 180
+ NQYG+SKG+PG SL+LENVSYGQLQALSA+P+D PALLDQER+EAGNAAYVI+PPPI+
Sbjct: 121 RTNQYGESKGVPGNSLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPPIM 180
Query: 181 EGCGVVKRFGSRVHVVPLHSDWFSPATVHRLERQVVPHFFSGKLPDCTPEKYMEIRNFVV 240
EG GVVKRFGSRVHVVP+HSDWFSPATVHRLERQVVPHFFSGKLPD TPEKYMEIRNFVV
Sbjct: 181 EGRGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVV 240
Query: 241 AKYMENPEKRVTVSECQGFVDGVSNEDLTRVVRFLDHWGIINYCAPTPSFEPWNSSTYLR 300
AKYMENPEKRVTVS+CQG VDGVSNEDLTR+VRFLDHWGIINYCAPTPS EPWNS++YLR
Sbjct: 241 AKYMENPEKRVTVSDCQGLVDGVSNEDLTRIVRFLDHWGIINYCAPTPSCEPWNSNSYLR 300
Query: 301 EDMNGEIHVPSAALKPIDSLIKFDKPKCSLKEADVYSESAFSCRDDNDGLCDLDSKIRER 360
EDMNGEIHVPSAALKPIDSL+KFDKPKC LK ADVY SA CRDD DGLCDLD++IRER
Sbjct: 301 EDMNGEIHVPSAALKPIDSLVKFDKPKCRLKAADVY--SALPCRDDIDGLCDLDNRIRER 360
Query: 361 LAENHCSSCSRSVPIAYYQSQKEVDVLLCSNCFHEGKYVAGHSSIDFLRVDTMEDYGELD 420
LAENHCSSCSRSVPIAYYQSQKEVDVLLCS+CFHEGKYVAGHSS+DFLRVD +DYGELD
Sbjct: 361 LAENHCSSCSRSVPIAYYQSQKEVDVLLCSDCFHEGKYVAGHSSVDFLRVDMAKDYGELD 420
Query: 421 SENWTHQETLLLLEAIELYNDNWNEITEHVGSKSKAQCIIHFLRLSVEDGLLDNVDVPGV 480
SENWT QETLLLLEAIELYN+NWNEITEHVGSKSKAQCIIHFLRLSVEDGLL+NVDVPGV
Sbjct: 421 SENWTDQETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENVDVPGV 480
Query: 481 PLSSNSSNGEDNEKSRSNMNGNVAGSSSQDNKEMHDRLPFANSGNPVMALVAFLASAIGP 540
LSS++S+G D+EKSRSNMNGN+AGSSSQDNKEMHDRLPFANSGNPVMALVAFLASAIGP
Sbjct: 481 SLSSSASHGGDSEKSRSNMNGNIAGSSSQDNKEMHDRLPFANSGNPVMALVAFLASAIGP 540
Query: 541 RVAASCAHASLATLSEDGAASSGSIFQMEGSVNANRTNVEITHGRDGGSYGELPNSVKPK 600
RVAASCAHASLA LSED ASSGSIF MEGSVNANR NV+ R+G SYGELPNS K
Sbjct: 541 RVAASCAHASLAALSEDSVASSGSIFHMEGSVNANRMNVDAKQAREGSSYGELPNSTDRK 600
Query: 601 DENRAETEVALISAERVKVAARGGLAAAATKAKLFADHEEREIQRLSANIINHQLKRLEL 660
DEN+AETE L+S+ERVKVAA+ GLAAAATKAKLFADHEEREIQRLSANIINHQLKRLEL
Sbjct: 601 DENKAETEATLLSSERVKVAAKAGLAAAATKAKLFADHEEREIQRLSANIINHQLKRLEL 660
Query: 661 KLKQFAEVETFLMKECEQVERTRQRLIAERARMLGVQFGPAGVSSPVSLPGVIPSM-VNN 720
KLKQFAEVETFLMKECEQVERTRQR +AERARMLGVQFGPAGV+ P SLPGVIPSM VNN
Sbjct: 661 KLKQFAEVETFLMKECEQVERTRQRFVAERARMLGVQFGPAGVTPPASLPGVIPSMVVNN 720
Query: 721 NGANNRPNMISPPPSQQPSVSGYSNN-QPLHPHMSYMPRQPVFGLGPRLPLSAIQQQQQH 780
+ N+RPNMISPP S QPSVSGYSNN QPLHPHMSYMPRQP+FGLG RLPLSAIQQQQQ
Sbjct: 721 SNTNSRPNMISPPAS-QPSVSGYSNNQQPLHPHMSYMPRQPMFGLGQRLPLSAIQQQQQQ 780
Query: 781 P--PSTTSSNAMFNGPSNAQPSLSHP-MRPVTGSSSGLG 807
PSTTSSNAMFNGPSNAQPSLSHP MRPVTGSSSGLG
Sbjct: 781 QQLPSTTSSNAMFNGPSNAQPSLSHPMMRPVTGSSSGLG 815
BLAST of Sed0027165 vs. ExPASy TrEMBL
Match:
A0A6J1FIF8 (SWI/SNF complex subunit SWI3C-like OS=Cucurbita moschata OX=3662 GN=LOC111445771 PE=4 SV=1)
HSP 1 Score: 1319.3 bits (3413), Expect = 0.0e+00
Identity = 692/817 (84.70%), Postives = 743/817 (90.94%), Query Frame = 0
Query: 1 MPASPSFPSGSRGKWKKKKRDSQIGRRNSF------GTNKHDDEDEDEDLG-VEIDDMER 60
MPASPSFPSGSRGKWKKKKRD+QIGRRN++ G+NKHDD+DEDEDL VE +MER
Sbjct: 1 MPASPSFPSGSRGKWKKKKRDTQIGRRNNYGNSNNNGSNKHDDDDEDEDLATVENQEMER 60
Query: 61 DIDDSEDPQTNTALPGSNSSLRETELLSEDQLRVSEFPLVVKRAVARPHSSVLAVVAMEK 120
D DDSEDPQ P N SL+ETELLS+D++RVSEFP VVKRAV RPHSSVLAVVAME+
Sbjct: 61 DNDDSEDPQ-----PTPNLSLQETELLSDDKMRVSEFPQVVKRAVTRPHSSVLAVVAMER 120
Query: 121 ANQYGQSKGLPGISLVLENVSYGQLQALSAVPSDCPALLDQERLEAGNAAYVISPPPIVE 180
AN QSK L G L+LENVSYGQLQALSA+P+D PALLDQER+EAGNAAYVI+PP I+E
Sbjct: 121 AN---QSKVLSGNPLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPSIME 180
Query: 181 GCGVVKRFGSRVHVVPLHSDWFSPATVHRLERQVVPHFFSGKLPDCTPEKYMEIRNFVVA 240
GCGVVKRFGSRVHVVP+HSDWFSPATVHRLERQVVPHFFSGKLPD TPEKYMEIRNFVVA
Sbjct: 181 GCGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVA 240
Query: 241 KYMENPEKRVTVSECQGFVDGVSNEDLTRVVRFLDHWGIINYCAPTPSFEPWNSSTYLRE 300
KYMENPEKRVTVS+CQG V+ VSN+DLTR+VRFLDHWGIINYCAPTPS EPWN S+YLRE
Sbjct: 241 KYMENPEKRVTVSDCQGLVNCVSNDDLTRIVRFLDHWGIINYCAPTPSCEPWNRSSYLRE 300
Query: 301 DMNGEIHVPSAALKPIDSLIKFDKPKCSLKEADVYSESAFSCRDDNDGLCDLDSKIRERL 360
DMNGEIHVPSAALKPIDSLIKFDKPKC LK D+Y SA SC DDND LCDLD++IRERL
Sbjct: 301 DMNGEIHVPSAALKPIDSLIKFDKPKCRLKAVDIY--SARSCHDDNDDLCDLDNRIRERL 360
Query: 361 AENHCSSCSRSVPIAYYQSQKEVDVLLCSNCFHEGKYVAGHSSIDFLRVDTMEDYGELDS 420
AENHCSSCSR+VPI YQSQKEVDVLLC++CFHEGKYVAGHSSIDFLRVD ++YGELDS
Sbjct: 361 AENHCSSCSRTVPIVCYQSQKEVDVLLCTDCFHEGKYVAGHSSIDFLRVDMTKEYGELDS 420
Query: 421 ENWTHQETLLLLEAIELYNDNWNEITEHVGSKSKAQCIIHFLRLSVEDGLLDNVDVPGVP 480
ENWT QETLLLLEAIELYN+NWNEITEHVGSKSKAQCIIHFLRLSVEDG+L+NVDVPGVP
Sbjct: 421 ENWTDQETLLLLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGILENVDVPGVP 480
Query: 481 LSSNSSNGEDNEKSRSNMNGNVAGSSSQDNKEMHDRLPFANSGNPVMALVAFLASAIGPR 540
LSSNSS+G+DNEKS SNMNGNVAGSSSQDNKEMHDRLPFANSGNPVMALVAFLASAIGPR
Sbjct: 481 LSSNSSHGKDNEKSHSNMNGNVAGSSSQDNKEMHDRLPFANSGNPVMALVAFLASAIGPR 540
Query: 541 VAASCAHASLATLSEDGAASSGSIFQMEGSVNANRTNVEITHGRDGGSYGELPNSVKPKD 600
VAASCAHASLA LSED AASSGSIFQ+EGSVN +RTNVE+THGRDGGSYG+LPNSVK KD
Sbjct: 541 VAASCAHASLAALSEDSAASSGSIFQVEGSVNPSRTNVEVTHGRDGGSYGKLPNSVKLKD 600
Query: 601 ENRAETEVALISAERVKVAARGGLAAAATKAKLFADHEEREIQRLSANIINHQLKRLELK 660
EN+AETEV L+SAERVKVAA+ GLAAAATKAKLFADHEEREIQRLSANIINHQLKRLELK
Sbjct: 601 ENKAETEVTLLSAERVKVAAKVGLAAAATKAKLFADHEEREIQRLSANIINHQLKRLELK 660
Query: 661 LKQFAEVETFLMKECEQVERTRQRLIAERARMLGVQFGPAGVSSPVSLPGVIPSMVNNNG 720
LKQFAEVETFLMKECEQVERT QR +AERARMLGVQFG AGVSSP SLPGVIP +VNNN
Sbjct: 661 LKQFAEVETFLMKECEQVERTGQRFVAERARMLGVQFGAAGVSSPASLPGVIPPVVNNNR 720
Query: 721 AN---NRPNMISPPPSQQPSVSGYSNNQPLHPHMSYMPRQPVFGLGPRLPLSAIQQQQQH 780
+ +RPN+ISPPPS QPSVSGY NNQPLHPHMSY+PRQ +FGLG R+PLSAIQQQQQ
Sbjct: 721 VSSPASRPNVISPPPS-QPSVSGYGNNQPLHPHMSYVPRQSMFGLGQRVPLSAIQQQQQQ 780
Query: 781 PPSTTSSNAMFNGPSNAQPSLSHP-MRPVTGSSSGLG 807
STTSSNAMFNGPSNAQ SLSHP MRPVTGSSSGLG
Sbjct: 781 LASTTSSNAMFNGPSNAQASLSHPMMRPVTGSSSGLG 806
BLAST of Sed0027165 vs. ExPASy TrEMBL
Match:
A0A6J1F755 (SWI/SNF complex subunit SWI3C-like OS=Cucurbita moschata OX=3662 GN=LOC111442760 PE=4 SV=1)
HSP 1 Score: 1318.9 bits (3412), Expect = 0.0e+00
Identity = 691/818 (84.47%), Postives = 742/818 (90.71%), Query Frame = 0
Query: 1 MPASPSFPSGSRGKWKKKKRDSQIGRRNSF------GTNKHDDEDEDEDL-GVEIDDMER 60
MPASPSFPSGSRGKW+KKKRDSQIGRRN+F G+NKH++EDEDEDL E ++MER
Sbjct: 1 MPASPSFPSGSRGKWRKKKRDSQIGRRNNFPNSNNNGSNKHEEEDEDEDLAAAENEEMER 60
Query: 61 D-IDDSEDPQTNTALPGSNSSLRETELLSEDQLRVSEFPLVVKRAVARPHSSVLAVVAME 120
D DDSEDPQ N NSSL+E ELLS+D++RVSEFP VVKR V RPHSSVLAVVAME
Sbjct: 61 DNNDDSEDPQINLQ-SAPNSSLQEPELLSDDKVRVSEFPQVVKRVVTRPHSSVLAVVAME 120
Query: 121 KANQYGQSKGLPGISLVLENVSYGQLQALSAVPSDCPALLDQERLEAGNAAYVISPPPIV 180
+ANQ+G+SKGLPG SL+LENVSYGQLQALSA+P+D PALLDQER+EAGNAAYVI+PPPI+
Sbjct: 121 RANQFGESKGLPGNSLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPPIM 180
Query: 181 EGCGVVKRFGSRVHVVPLHSDWFSPATVHRLERQVVPHFFSGKLPDCTPEKYMEIRNFVV 240
EG GVVKRFGSRVHVVP+HSDWFSPATVHRLERQVVPHFFSGK PD TPE+YMEIRNFVV
Sbjct: 181 EGRGVVKRFGSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKFPDRTPERYMEIRNFVV 240
Query: 241 AKYMENPEKRVTVSECQGFVDGVSNEDLTRVVRFLDHWGIINYCAPTPSFEPWNSSTYLR 300
AKYMENPEKRVTVS+ QG +DGVSNEDLTR+VRFLDHWGIINYCAP PS EPWNSS+YLR
Sbjct: 241 AKYMENPEKRVTVSDFQGLIDGVSNEDLTRIVRFLDHWGIINYCAPAPSCEPWNSSSYLR 300
Query: 301 EDMNGEIHVPSAALKPIDSLIKFDKPKCSLKEADVYSESAFSCRDDNDGLCDLDSKIRER 360
EDMNGEIHVPSAALKPIDSLIKFDKPKC LK +VY S C DDND LCDLD+KIRER
Sbjct: 301 EDMNGEIHVPSAALKPIDSLIKFDKPKCRLKANEVY--SILPCHDDNDDLCDLDNKIRER 360
Query: 361 LAENHCSSCSRSVPIAYYQSQKEVDVLLCSNCFHEGKYVAGHSSIDFLRVDTMEDYGELD 420
LAEN+CSSCS+ VPIAYYQSQKEVDVLLCSNCF+EGKYVAGH+SIDFLRVD +DY ELD
Sbjct: 361 LAENYCSSCSQPVPIAYYQSQKEVDVLLCSNCFYEGKYVAGHASIDFLRVDMTKDYDELD 420
Query: 421 SENWTHQETLLLLEAIELYNDNWNEITEHVGSKSKAQCIIHFLRLSVEDGLLDNVDVPGV 480
SENWT QETLLLLEAIELYNDNWNEITEHVGSKSKAQCIIHFLRLSVEDGLL+N+DVPGV
Sbjct: 421 SENWTDQETLLLLEAIELYNDNWNEITEHVGSKSKAQCIIHFLRLSVEDGLLENIDVPGV 480
Query: 481 PLSSNSSNGEDNEKSRSNMNGNVAGSSSQDNKEMHDRLPFANSGNPVMALVAFLASAIGP 540
LSSNSS+GEDNEKS SNMNGNVAGSSSQDNKEM DRLPFANS NPVMALVAFLASA+GP
Sbjct: 481 SLSSNSSHGEDNEKSHSNMNGNVAGSSSQDNKEMRDRLPFANSQNPVMALVAFLASAVGP 540
Query: 541 RVAASCAHASLATLSEDGAASSGSIFQMEGSVNANRTNVEITHGRDGGSYGELPNSVKPK 600
RVAASCAHASLA LSED ASSGSIFQ EGSVNANRTNV+ITHGRD GSYGELPNSV+ K
Sbjct: 541 RVAASCAHASLAALSEDSVASSGSIFQREGSVNANRTNVDITHGRDSGSYGELPNSVEQK 600
Query: 601 DENRAETEVALISAERVKVAARGGLAAAATKAKLFADHEEREIQRLSANIINHQLKRLEL 660
DEN+AE EV +S+ERVKVAA+ GLAAAATKAKLFADHEEREIQRLSANIINHQL+RLEL
Sbjct: 601 DENKAEPEVTQLSSERVKVAAKAGLAAAATKAKLFADHEEREIQRLSANIINHQLRRLEL 660
Query: 661 KLKQFAEVETFLMKECEQVERTRQRLIAERARMLGVQFG-PAGVSSPVSLPGVIPSMVNN 720
KLKQFAEVETFLMKECEQVERTRQRL+AERARMLG+QFG AGVSSP SLPGVIPSMVNN
Sbjct: 661 KLKQFAEVETFLMKECEQVERTRQRLVAERARMLGIQFGTAAGVSSPASLPGVIPSMVNN 720
Query: 721 NGANNRPNMISPPPSQQPSVSGYSNNQPLHPHMSYMPRQPVFGLGPRLPLSAI--QQQQQ 780
N N+R NMISPP S QPSVSGY+NNQPLHPHMSYMPRQ +FGLG RLPLSAI QQQQQ
Sbjct: 721 NNTNSRQNMISPPAS-QPSVSGYNNNQPLHPHMSYMPRQSMFGLGQRLPLSAIQQQQQQQ 780
Query: 781 HPPSTTSSNAMFNGPSNAQPSLSHP-MRPVTGSSSGLG 807
P+TTSSNAMFNGP+NAQPSLSHP MRPVTGSSSGLG
Sbjct: 781 QQPATTSSNAMFNGPTNAQPSLSHPMMRPVTGSSSGLG 814
BLAST of Sed0027165 vs. TAIR 10
Match:
AT1G21700.1 (SWITCH/sucrose nonfermenting 3C )
HSP 1 Score: 723.4 bits (1866), Expect = 2.0e-208
Identity = 442/842 (52.49%), Postives = 552/842 (65.56%), Query Frame = 0
Query: 1 MPASPSFPSGSRGKWKKKKRDSQIGRRNSFGTNKHDDEDEDEDLGVEIDDMERDIDDSED 60
MPAS RGKWK+KKR R + D E+EDE+ ++ D++++++
Sbjct: 1 MPAS----EDRRGKWKRKKRGGLSAARKP-KQEEEDMEEEDEENNNNNNEEMDDVENADE 60
Query: 61 PQTN---TALPGSNSSLRETELLSEDQLRVSEFPLVVKRAVARPHSSVLAVVAMEKANQY 120
Q N T PG L E++ + R+S+FP VVKR V RPH+SV+AVVA E+A
Sbjct: 61 LQQNGGATPDPG----LGIGEVVEDSGSRISDFPAVVKRVVIRPHASVMAVVAAERAGLI 120
Query: 121 GQSKGLPGISLVLENVSYGQLQALSAVPSDCPALLDQERLEAGNAAYVISPPPIVEGCGV 180
G+++G G LEN+S+GQLQALS VP+D LD ER + ++AYVISPPPI++G GV
Sbjct: 121 GETRG-QGSLPALENISFGQLQALSTVPADS---LDLERSDGSSSAYVISPPPIMDGEGV 180
Query: 181 VKRFGSRVHVVPLHSDWFSPATVHRLERQVVPHFFSGKLPDCTPEKYMEIRNFVVAKYME 240
VKRFG VHV+P+HSDWF+P TV RLERQVVP FFSGK P+ TPE YME RN +V+KY+E
Sbjct: 181 VKRFGDLVHVLPMHSDWFAPNTVDRLERQVVPQFFSGKSPNHTPESYMEFRNAIVSKYVE 240
Query: 241 NPEKRVTVSECQGFVDGVSNEDLTRVVRFLDHWGIINYCAPTPSFE-PWNSSTYLREDMN 300
NPEK +T+S+CQG VDGV ED RV RFLDHWGIINYCA S P + +RED N
Sbjct: 241 NPEKTLTISDCQGLVDGVDIEDFARVFRFLDHWGIINYCATAQSHPGPLRDVSDVREDTN 300
Query: 301 GEIHVPSAALKPIDSLIKFDKPKCSLKEADVYSESAFSCRDDNDGLCDLDSKIRERLAEN 360
GE++VPSAAL IDSLIKFDKP C K +VYS S S D+ DLD +IRE L ++
Sbjct: 301 GEVNVPSAALTSIDSLIKFDKPNCRHKGGEVYS-SLPSLDGDSP---DLDIRIREHLCDS 360
Query: 361 HCSSCSRSVPIAYYQSQKEVDVLLCSNCFHEGKYVAGHSSIDFLRVDTMEDYGELDSENW 420
HC+ CSR +P Y+QSQK+ D+LLC +CFH G++V GHS +DF+RVD M+ YG+ D +NW
Sbjct: 361 HCNHCSRPLPTVYFQSQKKGDILLCCDCFHHGRFVVGHSCLDFVRVDPMKFYGDQDGDNW 420
Query: 421 THQETLLLLEAIELYNDNWNEITEHVGSKSKAQCIIHFLRLSVEDGLLDNVDVPGVPLSS 480
T QETLLLLEA+ELYN+NW +I +HVGSKSKAQCI+HFLRL VEDGLLDNV+V GV +
Sbjct: 421 TDQETLLLLEAVELYNENWVQIADHVGSKSKAQCILHFLRLPVEDGLLDNVEVSGVTNTE 480
Query: 481 NSSNGEDNEKSRSNMNGNVAGSSSQDNKEMHDRLPFANSGNPVMALVAFLASAIGPRVAA 540
N +NG D++ + S NG++ G S Q + +LPF S NPVMALVAFLASA+GPRVAA
Sbjct: 481 NPTNGYDHKGTDS--NGDLPGYSEQ-GSDTEIKLPFVKSPNPVMALVAFLASAVGPRVAA 540
Query: 541 SCAHASLATLSEDGAASSGSIFQMEGSVNANRTNVEITHGRDGGSYGELPNSVKPKDENR 600
SCAH SL+ LSED S EG + ++ + + G++ K +N
Sbjct: 541 SCAHESLSVLSEDDRMKS------EGMQGKEASLLDGENQQQDGAH-------KTSSQNG 600
Query: 601 AETEVALISAERVKVAARGGLAAAATKAKLFADHEEREIQRLSANIINHQLKRLELKLKQ 660
AE + L ++V A R GL+AAATKAKLFADHEEREIQRLSANI+NHQLKR+ELKLKQ
Sbjct: 601 AEAQTPL-PQDKVMAAFRAGLSAAATKAKLFADHEEREIQRLSANIVNHQLKRMELKLKQ 660
Query: 661 FAEVETFLMKECEQVERTRQRLIAERARMLGVQFGPAGVSSPVSLPGVIPSMVNNNGANN 720
FAE+ET LMKECEQVE+TRQR AERARML +FG G SP + + M + G NN
Sbjct: 661 FAEIETLLMKECEQVEKTRQRFSAERARMLSARFGSPGGISPQT--NNLQGMSLSTGGNN 720
Query: 721 RPNMISPPPSQ-------QPS-VSGYSNNQPLHPHMSYMPR------------QPVFGLG 780
+++ Q QPS + G+SNN + M +M R Q F G
Sbjct: 721 INSLMHQQHQQQQASATSQPSIIPGFSNNPQVQAQMHFMARQQQQQQQQQQQQQQAFSFG 780
Query: 781 PRLPLSAIQQQQQHPPSTTSSNAMF-----NGPSNA------QPSLSHPM-RPVTGSSSG 807
PRLPL+AI Q + ST S N MF N P+ A QPS SHPM R TGS SG
Sbjct: 781 PRLPLNAI---QTNAGSTASPNVMFGNNQLNNPAAAGAASINQPSFSHPMVRSSTGSGSG 803
BLAST of Sed0027165 vs. TAIR 10
Match:
AT4G34430.1 (DNA-binding family protein )
HSP 1 Score: 176.8 bits (447), Expect = 7.0e-44
Identity = 207/822 (25.18%), Postives = 302/822 (36.74%), Query Frame = 0
Query: 183 SRVHVVPLHSDWFSPATVHRLERQVVPHFFSGKLPDCTPEKYMEIRNFVVAKYMENPEKR 242
S VHVVP H WFS +H LE + +P FF+GKL T E Y EIRN+++ K+ NP +
Sbjct: 142 SNVHVVPNHCGWFSWEKIHPLEERSLPSFFNGKLEGRTSEVYREIRNWIMGKFHSNPNIQ 201
Query: 243 VTVSECQGFVDGVSNEDLTRVVRFLDHWGIINYCAPTPSFEPWNSSTYLREDMNGEIHVP 302
+ + + G +E V+ FLD+WG+IN+ P P + ST D G+
Sbjct: 202 IELKDLTELEVG-DSEAKQEVMEFLDYWGLINF-HPFPPTD--TGSTASDHDDLGDKE-- 261
Query: 303 SAALKPIDSLIKFDKPKCSLKEADVYSESAFSCRDDNDGL------CDLDSKIRERLAEN 362
++SL +F + + + F+ + GL D K E
Sbjct: 262 ----SLLNSLYRFQVDEAC---PPLVHKPRFTAQATPSGLFPDPMAADELLKQEGPAVEY 321
Query: 363 HCSSCSRSVPIAYYQSQKEVDVLLCSNCFHEGKYVAGHSSIDFLRVDTMEDYGELDSENW 422
HC+SCS Y K+ D LC+ CF+ GK+ + SS DF+ ++ E G + S W
Sbjct: 322 HCNSCSADCSRKRYHCPKQADFDLCTECFNSGKFSSDMSSSDFILMEPAEAPG-VGSGKW 381
Query: 423 THQETLLLLEAIELYNDNWNEITEHVGSKSKAQCIIHFLRLSVEDGLLDNVDVPGVPLSS 482
T QETLLLLEA+E++ +NWNEI EHV +K+KAQC++HFL++ +ED LD +D P+S
Sbjct: 382 TDQETLLLLEALEIFKENWNEIAEHVATKTKAQCMLHFLQMPIEDAFLDQIDYKD-PISK 441
Query: 483 NSSN-----------------------------------GEDNEKSRSNMNGNVAGSSSQ 542
++++ ED + + + + G +S+
Sbjct: 442 DTTDLAVSKDDNSVLKDAPEEAENKKRVDEDETMKEVPEPEDGNEEKVSQESSKPGDASE 501
Query: 543 DNKEM--------------------------------------HDRLP-----FANSGNP 602
+ EM H P FA+ GNP
Sbjct: 502 ETNEMEAEQKTPKLETAIEERCKDEADENIALKALTEAFEDVGHSSTPEASFSFADLGNP 561
Query: 603 VMALVAFLASAIGPRVAASCAHASLATL----------------------SEDGAASSGS 662
VM L AFL G VA + A AS+ +L +D S
Sbjct: 562 VMGLAAFLVRLAGSDVATASARASIKSLHSNSGMLLATRHCYILEDPPDNKKDPTKSKSC 621
Query: 663 IFQMEG---------------------SVNAN-----------RTNVEITHGRDGGSYGE 722
EG S+N++ T ++ + GS E
Sbjct: 622 SADAEGNDDNSHKDDQPEEKSKKAEEVSLNSDDREMPDTDTGKETQDSVSEEKQPGSRTE 681
Query: 723 -------------------LPNSVKP--------------------KDENRAETE----- 726
NS KP KD N+ +E
Sbjct: 682 NSTTKLDAVQEKRSSKPVTTDNSEKPVDIICPSQDKCSGKELQEPLKDGNKLSSENKDAS 741
BLAST of Sed0027165 vs. TAIR 10
Match:
AT4G34430.3 (DNA-binding family protein )
HSP 1 Score: 176.8 bits (447), Expect = 7.0e-44
Identity = 199/820 (24.27%), Postives = 300/820 (36.59%), Query Frame = 0
Query: 183 SRVHVVPLHSDWFSPATVHRLERQVVPHFFSGKLPDCTPEKYMEIRNFVVAKYMENPEKR 242
S VHVVP H WFS +H LE + +P FF+GKL T E Y EIRN+++ K+ NP +
Sbjct: 142 SNVHVVPNHCGWFSWEKIHPLEERSLPSFFNGKLEGRTSEVYREIRNWIMGKFHSNPNIQ 201
Query: 243 VTVSECQGFVDGVSNEDLTRVVRFLDHWGIINYCAPTPSFEPWNSSTYLREDMNGEIHVP 302
+ + + G +E V+ FLD+WG+IN+ P P + ST D G+
Sbjct: 202 IELKDLTELEVG-DSEAKQEVMEFLDYWGLINF-HPFPPTD--TGSTASDHDDLGDKE-- 261
Query: 303 SAALKPIDSLIKFDKPKCSLKEADVYSESAFSCRDDNDGL------CDLDSKIRERLAEN 362
++SL +F + + + F+ + GL D K E
Sbjct: 262 ----SLLNSLYRFQVDEAC---PPLVHKPRFTAQATPSGLFPDPMAADELLKQEGPAVEY 321
Query: 363 HCSSCSRSVPIAYYQSQKEVDVLLCSNCFHEGKYVAGHSSIDFLRVDTMEDYGELDSENW 422
HC+SCS Y K+ D LC+ CF+ GK+ + SS DF+ ++ E G + S W
Sbjct: 322 HCNSCSADCSRKRYHCPKQADFDLCTECFNSGKFSSDMSSSDFILMEPAEAPG-VGSGKW 381
Query: 423 THQETLLLLEAIELYNDNWNEITEHVGSKSKAQCIIHFLRLSVEDGLLDNVDVPGVPLSS 482
T QETLLLLEA+E++ +NWNEI EHV +K+KAQC++HFL++ +ED LD +D P+S
Sbjct: 382 TDQETLLLLEALEIFKENWNEIAEHVATKTKAQCMLHFLQMPIEDAFLDQIDYKD-PISK 441
Query: 483 NSSN-----------------------------------GEDNEKSRSNMNGNVAGSSSQ 542
++++ ED + + + + G +S+
Sbjct: 442 DTTDLAVSKDDNSVLKDAPEEAENKKRVDEDETMKEVPEPEDGNEEKVSQESSKPGDASE 501
Query: 543 DNKEM--------------------------------------HDRLP-----FANSGNP 602
+ EM H P FA+ GNP
Sbjct: 502 ETNEMEAEQKTPKLETAIEERCKDEADENIALKALTEAFEDVGHSSTPEASFSFADLGNP 561
Query: 603 VMALVAFLASAIGPRVAASCAHASLATL-------------------------------- 662
VM L AFL G VA + A AS+ +L
Sbjct: 562 VMGLAAFLVRLAGSDVATASARASIKSLHSNSGMLLATRHCYILEDPPDNKKDPTKSKSA 621
Query: 663 ------------------------------------------------------------ 722
Sbjct: 622 DAEGNDDNSHKDDQPEEKSKKAEEVSLNSDDREMPDTDTGKETQDSVSEEKQPGSRTENS 681
Query: 723 ---------------------------------------------------SEDGAASSG 726
SE+ AS
Sbjct: 682 TTKLDAVQEKRSSKPVTTDNSEKPVDIICPSQDKCSGKELQEPLKDGNKLSSENKDASQS 741
BLAST of Sed0027165 vs. TAIR 10
Match:
AT4G34430.2 (DNA-binding family protein )
HSP 1 Score: 176.8 bits (447), Expect = 7.0e-44
Identity = 207/822 (25.18%), Postives = 302/822 (36.74%), Query Frame = 0
Query: 183 SRVHVVPLHSDWFSPATVHRLERQVVPHFFSGKLPDCTPEKYMEIRNFVVAKYMENPEKR 242
S VHVVP H WFS +H LE + +P FF+GKL T E Y EIRN+++ K+ NP +
Sbjct: 142 SNVHVVPNHCGWFSWEKIHPLEERSLPSFFNGKLEGRTSEVYREIRNWIMGKFHSNPNIQ 201
Query: 243 VTVSECQGFVDGVSNEDLTRVVRFLDHWGIINYCAPTPSFEPWNSSTYLREDMNGEIHVP 302
+ + + G +E V+ FLD+WG+IN+ P P + ST D G+
Sbjct: 202 IELKDLTELEVG-DSEAKQEVMEFLDYWGLINF-HPFPPTD--TGSTASDHDDLGDKE-- 261
Query: 303 SAALKPIDSLIKFDKPKCSLKEADVYSESAFSCRDDNDGL------CDLDSKIRERLAEN 362
++SL +F + + + F+ + GL D K E
Sbjct: 262 ----SLLNSLYRFQVDEAC---PPLVHKPRFTAQATPSGLFPDPMAADELLKQEGPAVEY 321
Query: 363 HCSSCSRSVPIAYYQSQKEVDVLLCSNCFHEGKYVAGHSSIDFLRVDTMEDYGELDSENW 422
HC+SCS Y K+ D LC+ CF+ GK+ + SS DF+ ++ E G + S W
Sbjct: 322 HCNSCSADCSRKRYHCPKQADFDLCTECFNSGKFSSDMSSSDFILMEPAEAPG-VGSGKW 381
Query: 423 THQETLLLLEAIELYNDNWNEITEHVGSKSKAQCIIHFLRLSVEDGLLDNVDVPGVPLSS 482
T QETLLLLEA+E++ +NWNEI EHV +K+KAQC++HFL++ +ED LD +D P+S
Sbjct: 382 TDQETLLLLEALEIFKENWNEIAEHVATKTKAQCMLHFLQMPIEDAFLDQIDYKD-PISK 441
Query: 483 NSSN-----------------------------------GEDNEKSRSNMNGNVAGSSSQ 542
++++ ED + + + + G +S+
Sbjct: 442 DTTDLAVSKDDNSVLKDAPEEAENKKRVDEDETMKEVPEPEDGNEEKVSQESSKPGDASE 501
Query: 543 DNKEM--------------------------------------HDRLP-----FANSGNP 602
+ EM H P FA+ GNP
Sbjct: 502 ETNEMEAEQKTPKLETAIEERCKDEADENIALKALTEAFEDVGHSSTPEASFSFADLGNP 561
Query: 603 VMALVAFLASAIGPRVAASCAHASLATL----------------------SEDGAASSGS 662
VM L AFL G VA + A AS+ +L +D S
Sbjct: 562 VMGLAAFLVRLAGSDVATASARASIKSLHSNSGMLLATRHCYILEDPPDNKKDPTKSKSC 621
Query: 663 IFQMEG---------------------SVNAN-----------RTNVEITHGRDGGSYGE 722
EG S+N++ T ++ + GS E
Sbjct: 622 SADAEGNDDNSHKDDQPEEKSKKAEEVSLNSDDREMPDTDTGKETQDSVSEEKQPGSRTE 681
Query: 723 -------------------LPNSVKP--------------------KDENRAETE----- 726
NS KP KD N+ +E
Sbjct: 682 NSTTKLDAVQEKRSSKPVTTDNSEKPVDIICPSQDKCSGKELQEPLKDGNKLSSENKDAS 741
BLAST of Sed0027165 vs. TAIR 10
Match:
AT4G34430.4 (DNA-binding family protein )
HSP 1 Score: 172.6 bits (436), Expect = 1.3e-42
Identity = 207/823 (25.15%), Postives = 302/823 (36.70%), Query Frame = 0
Query: 183 SRVHVVPLHSDWFSPATVHRLERQVVPHFFSGKLPDCTPEKYMEIRNFVVAKYMENPEKR 242
S VHVVP H WFS +H LE + +P FF+GKL T E Y EIRN+++ K+ NP +
Sbjct: 142 SNVHVVPNHCGWFSWEKIHPLEERSLPSFFNGKLEGRTSEVYREIRNWIMGKFHSNPNIQ 201
Query: 243 VTVSECQGFVDGVSNEDLTRVVRFLDHWGIINYCAPTPSFEPWNSSTYLREDMNGEIHVP 302
+ + + G +E V+ FLD+WG+IN+ P P + ST D G+
Sbjct: 202 IELKDLTELEVG-DSEAKQEVMEFLDYWGLINF-HPFPPTD--TGSTASDHDDLGDKE-- 261
Query: 303 SAALKPIDSLIKFDKPKCSLKEADVYSESAFSCRDDNDGL------CDLDSKIRERLAEN 362
++SL +F + + + F+ + GL D K E
Sbjct: 262 ----SLLNSLYRFQVDEAC---PPLVHKPRFTAQATPSGLFPDPMAADELLKQEGPAVEY 321
Query: 363 HCSSCSRSVPIAYYQSQKEVDVLLCSNCFHEGKYVAGHSSIDFLRVDTMEDYGELDSENW 422
HC+SCS Y K+ D LC+ CF+ GK+ + SS DF+ ++ E G + S W
Sbjct: 322 HCNSCSADCSRKRYHCPKQADFDLCTECFNSGKFSSDMSSSDFILMEPAEAPG-VGSGKW 381
Query: 423 THQETLLLLEAIELYNDNWNEITEHVGSKSKAQCIIHFLRLSVEDGLLDNVDVPGVPLSS 482
T QETLLLLEA+E++ +NWNEI EHV +K+KAQC++HFL++ +ED LD +D P+S
Sbjct: 382 TDQETLLLLEALEIFKENWNEIAEHVATKTKAQCMLHFLQMPIEDAFLDQIDYKD-PISK 441
Query: 483 NSSN-----------------------------------GEDNEKSRSNMNGNVAGSSSQ 542
++++ ED + + + + G +S+
Sbjct: 442 DTTDLAVSKDDNSVLKDAPEEAENKKRVDEDETMKEVPEPEDGNEEKVSQESSKPGDASE 501
Query: 543 DNKEM--------------------------------------HDRLP-----FANSGNP 602
+ EM H P FA+ GNP
Sbjct: 502 ETNEMEAEQKTPKLETAIEERCKDEADENIALKALTEAFEDVGHSSTPEASFSFADLGNP 561
Query: 603 VMALVAFLASAIGPRVAASCAHASLATL----------------------SEDGAASSGS 662
VM L AFL G VA + A AS+ +L +D S
Sbjct: 562 VMGLAAFLVRLAGSDVATASARASIKSLHSNSGMLLATRHCYILEDPPDNKKDPTKSKSC 621
Query: 663 IFQMEG---------------------SVNAN-----------RTNVEITHGRDGGSYGE 722
EG S+N++ T ++ + GS E
Sbjct: 622 SADAEGNDDNSHKDDQPEEKSKKAEEVSLNSDDREMPDTDTGKETQDSVSEEKQPGSRTE 681
Query: 723 -------------------LPNSVKP--------------------KDENRAETE----- 726
NS KP KD N+ +E
Sbjct: 682 NSTTKLDAVQEKRSSKPVTTDNSEKPVDIICPSQDKCSGKELQEPLKDGNKLSSENKDAS 741
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_008444192.1 | 0.0e+00 | 85.10 | PREDICTED: SWI/SNF complex subunit SWI3C [Cucumis melo] >TYK30001.1 SWI/SNF comp... | [more] |
XP_004142633.1 | 0.0e+00 | 84.98 | SWI/SNF complex subunit SWI3C [Cucumis sativus] >KGN54546.1 hypothetical protein... | [more] |
XP_023524497.1 | 0.0e+00 | 84.94 | SWI/SNF complex subunit SWI3C-like [Cucurbita pepo subsp. pepo] | [more] |
KAG6591874.1 | 0.0e+00 | 84.93 | SWI/SNF complex subunit SWI3C, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
KAG7024741.1 | 0.0e+00 | 84.93 | SWI/SNF complex subunit SWI3C [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
Match Name | E-value | Identity | Description | |
Q9XI07 | 2.8e-207 | 52.49 | SWI/SNF complex subunit SWI3C OS=Arabidopsis thaliana OX=3702 GN=SWI3C PE=1 SV=1 | [more] |
Q53KK6 | 4.7e-170 | 46.79 | SWI/SNF complex subunit SWI3C homolog OS=Oryza sativa subsp. japonica OX=39947 G... | [more] |
P97496 | 2.6e-43 | 26.71 | SWI/SNF complex subunit SMARCC1 OS=Mus musculus OX=10090 GN=Smarcc1 PE=1 SV=2 | [more] |
Q8VY05 | 9.9e-43 | 25.18 | SWI/SNF complex subunit SWI3D OS=Arabidopsis thaliana OX=3702 GN=SWI3D PE=1 SV=3 | [more] |
Q92922 | 2.9e-42 | 27.13 | SWI/SNF complex subunit SMARCC1 OS=Homo sapiens OX=9606 GN=SMARCC1 PE=1 SV=3 | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3E339 | 0.0e+00 | 85.10 | SWI/SNF complex subunit SWI3C OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... | [more] |
A0A1S3B9W1 | 0.0e+00 | 85.10 | SWI/SNF complex subunit SWI3C OS=Cucumis melo OX=3656 GN=LOC103487606 PE=4 SV=1 | [more] |
A0A0A0L361 | 0.0e+00 | 84.98 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G361800 PE=4 SV=1 | [more] |
A0A6J1FIF8 | 0.0e+00 | 84.70 | SWI/SNF complex subunit SWI3C-like OS=Cucurbita moschata OX=3662 GN=LOC111445771... | [more] |
A0A6J1F755 | 0.0e+00 | 84.47 | SWI/SNF complex subunit SWI3C-like OS=Cucurbita moschata OX=3662 GN=LOC111442760... | [more] |