Sed0027146 (gene) Chayote v1

Overview


Name	Sed0027146
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Pathogenesis-related protein PR-4-like
Location	LG11: 2042163 .. 2044765 (-)
RNA-Seq Expression	Sed0027146
Synteny	Sed0027146

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAGAAATAAAGAGAAAAAAAATGGAGAAAAAAAGTTTGGTTTTGATGTTGGGTTTGTCTTTGTGGGCGAGTCTGGTCGGCGGCGCCGTCGGCCAAAGCGCCACAAATGTGAGGGCTACCTATAATTTATACGATCCTCAAAACATAAACTGGGATTATAGCCGTGCCAGTGTTTACTGTGCCACGTGGGACGCCGATAAGCCACTCGAGTGGCGCCGCCGCTACGGTTGGACTGCGTTCTGCGGCCCTGTCGGTCCTACTGGTCGAGATTCTTGCGGCCGTTGTCTCAAGGTTTGTGTTAGATAAATCAGTTGATAATGAGAGTAGTGCGTATATATTTTATTCGATGTCATGAAGCTTCTTTCATATTTTTAGTCTTGCGAGTATCTATATATGTCTCTCTTTAGTTCATTATTTTTGGATTGAATCTTAATTTCTTTCGTTCTTGATAGAAGATTTATTTGGACTTTGATTTTGATTCTTTTTGAAGAAAAGTAGTTTGTCTGTTTAGTGATTGATTTTGAAATGAACTCATAATTTATCTACTATATTATAGAGTCCACAAATTTAAAGGAATATTCCATTACAAAAAAAGGAATCCCATGTGTTCAAATTTTCACATAAGATTTTTCATTTTTCATAATTAATTTGGAGTTCAAATTCTATGTTATCCCATACTATGTGTGTCCTCTTTTTTTTTTTTTAGTTGGATTTAAATTCTATTTGGGTTGTTTTTTTTCTACTTGATTAATCAATGATGTATATTTTAACCAATTCAATTATGCTCAAAGCAAACCATCAATTGTTGAGATGGTTATAGATGTCTTTAATTATCTTATCTATATATTCATCCGTTAGGCTTGAATTTGACTTTTTCTAAACTAATAGAACTTTATTAAACAATTACTTACTATTTAGTTATTTGAGTTGTATTTAGGCAAATTTATCGTTACACGTTTCCTTATATTTTCAAATATTGTATTTTAGTAGTTTCAACCTTGCATTTAGAAGATTAATGTTTGTTTGAATGTAACGTTTTTGCACTAGAAATTATGCCAACTTGTGTGTTTTTAGCTGTTTTTTTTTAAAAAAATGAAATACTTTATTAAACAACCAACAATCATTACAATCTACCGAGAGTCAGTGGCGCAATTGGTTATCTTGTTTGGTGTTAATCCATTTCAACTTCACGGTGTAGTTGTGCCCTCTATATAGGGTTTGTTGGTCCCACACATATATTAAAATAACTTAAATCAAAGTTTAACCTAATTGTACAATTGAACTTTAGGGTCACAATCTTAACCAAAGTGGAAACAACTACTAAACAAAACTACATGACAAGAAGAACCCTCGACCAGAACAAGTCCCAAAAGAAAGATTTATAGAAAATCGAAAAGAAGACTGAATAGGTTCATATGAGTCGGTGGGACGGATCACGAACCAAACCGAGAACCCATTTGGTTTATGTTTAGTTGAACCAAACCCTCCAAACCCTAAAAATAAACCTTGTATTTTTTTAAAACCCATTTGGTAGTCCATTTTTGTTTAACTTTTGTTTCATAGTTTCGATTTCTATTAACGTGTTTCCATCATTATTCATTACATGCATCTGTATTATACATATAGGGAGAGAGATATAATAAACTCAACAATATTATTTATATCTTTAAATATAAGTGGTTTTCAGTTCATCAGTTGAGGCTAAAGACTTTAACGCATACTTTTTTTAGAGATCCTTGGTTCGAGGTCACTAGCGCTTAAACTAAAATACTCTTCGAAGTATCCCGGTACCATAGTCTAGGGACTGGCCAGTGGTACCCTGAGTATAGGGAAACGAAGCTCCGATTTCCCGATTTTCAATAAAAAAAACTTTAAATATAAGCAAATACATAGAAATATTATTGTTGGTTGAATGTATTATATGTATATATTCAAAATTTAACCATAGAAAAGATATATGTTTGTAAGTTTAAGATAATGTTTGAAAATGTGCAGGTAAAAAATACAGAGACAGGAGATGAGCAAAAAGTAAGAATTGTGGATCAATGTGCCAATGGAGGCTTAGATTTGGACTATAATGTGTTCATGATATTAGACACTAATGGCAATGGCATTGCTCGTGGCCATCTTATAGTTGATTACGAGTTTGTTAATTGCTAACAATTTTAATCTTTTCAATCTTTCCATATACAAGGATATGAAAAAAAAAAAAAACAATTGTACCGAAATAAATAAACTATGATTAAGTTCCTCTCAATAAATTAACAAACACGAGATTTCGATAAAGAATAAAAAATGGGATACGTGTAAATGAATTTAAATTGTACTCATCTATACAAAATGTGAGTATAATCTATAATTTATTCTTTTGTTTCAATTTCTCTTATATACAAACATTTCGAGAGCTTTGCTGCTTGTTATTAACTTGTTTTAGAATGTGAAATTGTGATCTCAAGGGCTTTGCAACTTATTTTTTAGCGTGCTTTGTTGAACTTTGAACTAATCCTTTATTAGTTGATCTGTAGATCGGTCCTCGGTCTTAGGACTTGCAAGCTTGTTTTCAAACGGAGAGAGATTGAATCTTCAACTTGTAGATAGTGAA

mRNA sequence

AAAAGAAATAAAGAGAAAAAAAATGGAGAAAAAAAGTTTGGTTTTGATGTTGGGTTTGTCTTTGTGGGCGAGTCTGGTCGGCGGCGCCGTCGGCCAAAGCGCCACAAATGTGAGGGCTACCTATAATTTATACGATCCTCAAAACATAAACTGGGATTATAGCCGTGCCAGTGTTTACTGTGCCACGTGGGACGCCGATAAGCCACTCGAGTGGCGCCGCCGCTACGGTTGGACTGCGTTCTGCGGCCCTGTCGGTCCTACTGGTCGAGATTCTTGCGGCCGTTGTCTCAAGGTAAAAAATACAGAGACAGGAGATGAGCAAAAAGTAAGAATTGTGGATCAATGTGCCAATGGAGGCTTAGATTTGGACTATAATGTGTTCATGATATTAGACACTAATGGCAATGGCATTGCTCGTGGCCATCTTATAGTTGATTACGAGTTTGTTAATTGCTAACAATTTTAATCTTTTCAATCTTTCCATATACAAGGATATGAAAAAAAAAAAAAACAATTGTACCGAAATAAATAAACTATGATTAAGTTCCTCTCAATAAATTAACAAACACGAGATTTCGATAAAGAATAAAAAATGGGATACGTGTAAATGAATTTAAATTGTACTCATCTATACAAAATGTGAGTATAATCTATAATTTATTCTTTTGTTTCAATTTCTCTTATATACAAACATTTCGAGAGCTTTGCTGCTTGTTATTAACTTGTTTTAGAATGTGAAATTGTGATCTCAAGGGCTTTGCAACTTATTTTTTAGCGTGCTTTGTTGAACTTTGAACTAATCCTTTATTAGTTGATCTGTAGATCGGTCCTCGGTCTTAGGACTTGCAAGCTTGTTTTCAAACGGAGAGAGATTGAATCTTCAACTTGTAGATAGTGAA

Coding sequence (CDS)

ATGGAGAAAAAAAGTTTGGTTTTGATGTTGGGTTTGTCTTTGTGGGCGAGTCTGGTCGGCGGCGCCGTCGGCCAAAGCGCCACAAATGTGAGGGCTACCTATAATTTATACGATCCTCAAAACATAAACTGGGATTATAGCCGTGCCAGTGTTTACTGTGCCACGTGGGACGCCGATAAGCCACTCGAGTGGCGCCGCCGCTACGGTTGGACTGCGTTCTGCGGCCCTGTCGGTCCTACTGGTCGAGATTCTTGCGGCCGTTGTCTCAAGGTAAAAAATACAGAGACAGGAGATGAGCAAAAAGTAAGAATTGTGGATCAATGTGCCAATGGAGGCTTAGATTTGGACTATAATGTGTTCATGATATTAGACACTAATGGCAATGGCATTGCTCGTGGCCATCTTATAGTTGATTACGAGTTTGTTAATTGCTAA

Protein sequence

MEKKSLVLMLGLSLWASLVGGAVGQSATNVRATYNLYDPQNINWDYSRASVYCATWDADKPLEWRRRYGWTAFCGPVGPTGRDSCGRCLKVKNTETGDEQKVRIVDQCANGGLDLDYNVFMILDTNGNGIARGHLIVDYEFVNC

Homology

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BLAST of Sed0027146 vs. NCBI nr
Match: XP_038891021.1 (pathogenesis-related protein PR-4-like [Benincasa hispida])

HSP 1 Score: 241.9 bits (616), Expect = 3.4e-60
Identity = 107/142 (75.35%), Postives = 121/142 (85.21%), Query Frame = 0


Query: 3   KKSLVLMLGLSLWASLVGGAVGQSATNVRATYNLYDPQNINWDYSRASVYCATWDADKPL 62
           K+  +++L L+LWASLVGG  GQSA+NV ATYNLY+PQ INW+Y  ASVYCATWDA+KPL
Sbjct: 2   KRGSLIVLMLALWASLVGGGNGQSASNVLATYNLYNPQTINWNYLTASVYCATWDANKPL 61

Query: 63  EWRRRYGWTAFCGPVGPTGRDSCGRCLKVKNTETGDEQKVRIVDQCANGGLDLDYNVFMI 122
            WR  YGWTAFCGP GPTGRDSCG CL+V+NTETGDE+ VRIVDQC+NGGLDLDY VF  
Sbjct: 62  NWRSHYGWTAFCGPAGPTGRDSCGCCLRVRNTETGDEETVRIVDQCSNGGLDLDYGVFQK 121

Query: 123 LDTNGNGIARGHLIVDYEFVNC 145
           LDTNGNG A GHL+VDY FVNC
Sbjct: 122 LDTNGNGFAHGHLLVDYHFVNC 143

[Close]

BLAST of Sed0027146 vs. NCBI nr
Match: XP_004139241.1 (pathogenesis-related protein PR-4 [Cucumis sativus] >KGN60802.1 hypothetical protein Csa_019189 [Cucumis sativus])

HSP 1 Score: 240.0 bits (611), Expect = 1.3e-59
Identity = 103/144 (71.53%), Postives = 124/144 (86.11%), Query Frame = 0


Query: 1   MEKKSLVLMLGLSLWASLVGGAVGQSATNVRATYNLYDPQNINWDYSRASVYCATWDADK 60
           M++ SL+++  L+LWASL+G   GQSA+NV ATYN Y+PQ I W+Y  ASV+C+TWDA+K
Sbjct: 1   MKRGSLIIIFALALWASLLGSGKGQSASNVLATYNFYNPQTIGWNYMTASVFCSTWDANK 60

Query: 61  PLEWRRRYGWTAFCGPVGPTGRDSCGRCLKVKNTETGDEQKVRIVDQCANGGLDLDYNVF 120
           PL WR+ YGWTAFCGPVGP+GR+SCGRCL+V+NTETGDE+ VRIVDQC+NGGLDLD+ VF
Sbjct: 61  PLNWRKHYGWTAFCGPVGPSGRNSCGRCLRVRNTETGDEETVRIVDQCSNGGLDLDFGVF 120

Query: 121 MILDTNGNGIARGHLIVDYEFVNC 145
             LDTNGNG ARGHLIVDY FVNC
Sbjct: 121 QKLDTNGNGFARGHLIVDYRFVNC 144

[Close]

BLAST of Sed0027146 vs. NCBI nr
Match: KAA0063601.1 (pathogenesis-related protein PR-4-like [Cucumis melo var. makuwa])

HSP 1 Score: 240.0 bits (611), Expect = 1.3e-59
Identity = 104/142 (73.24%), Postives = 122/142 (85.92%), Query Frame = 0


Query: 3   KKSLVLMLGLSLWASLVGGAVGQSATNVRATYNLYDPQNINWDYSRASVYCATWDADKPL 62
           K+  +++  L+LWASL+G   GQSA+NV ATYN Y+PQ I W+Y  ASV+CATWDA+KPL
Sbjct: 2   KRGSLIVFALALWASLLGSGKGQSASNVIATYNFYNPQTIGWNYMTASVFCATWDANKPL 61

Query: 63  EWRRRYGWTAFCGPVGPTGRDSCGRCLKVKNTETGDEQKVRIVDQCANGGLDLDYNVFMI 122
            WR+ YGWTAFCGPVGPTGRDSCGRCL+V+NTETGDE+ VRIVDQC+NGGLDLDY+VF  
Sbjct: 62  NWRKHYGWTAFCGPVGPTGRDSCGRCLRVRNTETGDEETVRIVDQCSNGGLDLDYDVFKK 121

Query: 123 LDTNGNGIARGHLIVDYEFVNC 145
           LD+NGNG ARGHLIVDY FVNC
Sbjct: 122 LDSNGNGFARGHLIVDYHFVNC 143

[Close]

BLAST of Sed0027146 vs. NCBI nr
Match: XP_031129054.1 (pathogenesis-related protein PR-4-like [Ipomoea triloba])

HSP 1 Score: 229.2 bits (583), Expect = 2.3e-56
Identity = 103/133 (77.44%), Postives = 114/133 (85.71%), Query Frame = 0


Query: 12  LSLWASLVGGAVGQSATNVRATYNLYDPQNINWDYSRASVYCATWDADKPLEWRRRYGWT 71
           L L  ++VGGA  QSATNVRATYN+Y+PQNINWDY RASV+CATWD +KPLEWRR+YGWT
Sbjct: 9   LLLVVAMVGGAAAQSATNVRATYNIYNPQNINWDYYRASVFCATWDGNKPLEWRRKYGWT 68

Query: 72  AFCGPVGPTGRDSCGRCLKVKNTETGDEQKVRIVDQCANGGLDLDYNVFMILDTNGNGIA 131
           AFCGPVGP GRDSCGRCLKV NT T  +  VRIVDQCANGGLDLD NVF  LDT+G G A
Sbjct: 69  AFCGPVGPRGRDSCGRCLKVTNTATSAQVTVRIVDQCANGGLDLDVNVFNQLDTDGQGYA 128

Query: 132 RGHLIVDYEFVNC 145
           RGHLIV+Y+FVNC
Sbjct: 129 RGHLIVNYDFVNC 141

[Close]

BLAST of Sed0027146 vs. NCBI nr
Match: XP_008456018.1 (PREDICTED: pathogenesis-related protein PR-4-like [Cucumis melo] >KAA0063603.1 pathogenesis-related protein PR-4-like [Cucumis melo var. makuwa] >TYK18424.1 pathogenesis-related protein PR-4-like [Cucumis melo var. makuwa])

HSP 1 Score: 228.0 bits (580), Expect = 5.1e-56
Identity = 106/144 (73.61%), Postives = 123/144 (85.42%), Query Frame = 0


Query: 1   MEKKSLVLMLGLSLWASLVGGAVGQSATNVRATYNLYDPQNINWDYSRASVYCATWDADK 60
           MEK S++++L L+L   ++  A  QSATNVRATY+LY+PQ+INWDY RASV+CATWDA+K
Sbjct: 1   MEKGSIMMILVLAL--GVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANK 60

Query: 61  PLEWRRRYGWTAFCGPVGPTGRDSCGRCLKVKNTETGDEQKVRIVDQCANGGLDLDYNVF 120
           PLEWRRRYGWTAFCGPVGP GRDSCGRCL+V NTETG  + VRIVDQCANGGLDLD NVF
Sbjct: 61  PLEWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVF 120

Query: 121 MILDTNGNGIARGHLIVDYEFVNC 145
             +DTNGNG  RGHL V+Y+FVNC
Sbjct: 121 RRIDTNGNGNFRGHLTVNYQFVNC 142

[Close]

BLAST of Sed0027146 vs. ExPASy Swiss-Prot
Match: P32045 (Pathogenesis-related protein P2 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.2e-54
Identity = 96/123 (78.05%), Postives = 104/123 (84.55%), Query Frame = 0


Query: 22  AVGQSATNVRATYNLYDPQNINWDYSRASVYCATWDADKPLEWRRRYGWTAFCGPVGPTG 81
           A  QSATNVRATY+LY+PQNINWD   ASVYCATWDADKPLEWRRRYGWTAFCGP GPTG
Sbjct: 21  AAAQSATNVRATYHLYNPQNINWDLRTASVYCATWDADKPLEWRRRYGWTAFCGPAGPTG 80

Query: 82  RDSCGRCLKVKNTETGDEQKVRIVDQCANGGLDLDYNVFMILDTNGNGIARGHLIVDYEF 141
           + SCGRCL+V NT TG ++ VRIVDQC NGGLDLD NVF  LDTNG G  RG+L V+YEF
Sbjct: 81  QASCGRCLRVTNTGTGTQETVRIVDQCRNGGLDLDVNVFNRLDTNGLGYQRGNLNVNYEF 140

Query: 142 VNC 145
           VNC
Sbjct: 141 VNC 143

[Close]

BLAST of Sed0027146 vs. ExPASy Swiss-Prot
Match: P29063 (Pathogenesis-related protein PR-4B OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 4.2e-53
Identity = 93/137 (67.88%), Postives = 110/137 (80.29%), Query Frame = 0


Query: 8   LMLGLSLWASLVGGAVGQSATNVRATYNLYDPQNINWDYSRASVYCATWDADKPLEWRRR 67
           L + L + + ++  A  QSATNVR+TY+LY+PQNINWD   AS +CATWDADKPL WR++
Sbjct: 9   LCVALLIMSVMMAMAAAQSATNVRSTYHLYNPQNINWDLRAASAFCATWDADKPLAWRQK 68

Query: 68  YGWTAFCGPVGPTGRDSCGRCLKVKNTETGDEQKVRIVDQCANGGLDLDYNVFMILDTNG 127
           YGWTAFCGP GP G+DSCGRCL+V NT TG +  VRIVDQC+NGGLDLD NVF  LDTNG
Sbjct: 69  YGWTAFCGPAGPRGQDSCGRCLRVTNTGTGTQATVRIVDQCSNGGLDLDVNVFNQLDTNG 128

Query: 128 NGIARGHLIVDYEFVNC 145
            G  +GHLIV+YEFVNC
Sbjct: 129 LGYQQGHLIVNYEFVNC 145

[Close]

BLAST of Sed0027146 vs. ExPASy Swiss-Prot
Match: P29062 (Pathogenesis-related protein PR-4A OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 2.7e-52
Identity = 92/137 (67.15%), Postives = 109/137 (79.56%), Query Frame = 0


Query: 8   LMLGLSLWASLVGGAVGQSATNVRATYNLYDPQNINWDYSRASVYCATWDADKPLEWRRR 67
           L + L + + ++  A  QSATNVR+TY+LY+PQNINWD   AS +CATWDADKPL WR++
Sbjct: 9   LCVALLIISMVMAMAAAQSATNVRSTYHLYNPQNINWDLRAASAFCATWDADKPLAWRQK 68

Query: 68  YGWTAFCGPVGPTGRDSCGRCLKVKNTETGDEQKVRIVDQCANGGLDLDYNVFMILDTNG 127
           YGWTAFCGP GP G+DSCGRCL+V NT TG +  VRIVDQC+NGGLDLD NVF  LDTNG
Sbjct: 69  YGWTAFCGPAGPRGQDSCGRCLRVTNTGTGTQTTVRIVDQCSNGGLDLDVNVFNQLDTNG 128

Query: 128 NGIARGHLIVDYEFVNC 145
            G  +GHL V+YEFVNC
Sbjct: 129 VGYQQGHLTVNYEFVNC 145

[Close]

BLAST of Sed0027146 vs. ExPASy Swiss-Prot
Match: P09761 (Wound-induced protein WIN1 OS=Solanum tuberosum OX=4113 GN=WIN1 PE=2 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 9.7e-50
Identity = 82/119 (68.91%), Postives = 101/119 (84.87%), Query Frame = 0


Query: 26  SATNVRATYNLYDPQNINWDYSRASVYCATWDADKPLEWRRRYGWTAFCGPVGPTGRDSC 85
           SA NVRATY++Y+PQN+ WD +  S YC+TWDA+KPL WR++YGWTAFCGPVGP GRDSC
Sbjct: 79  SAQNVRATYHIYNPQNVGWDLNAVSAYCSTWDANKPLSWRKKYGWTAFCGPVGPRGRDSC 138

Query: 86  GRCLKVKNTETGDEQKVRIVDQCANGGLDLDYNVFMILDTNGNGIARGHLIVDYEFVNC 145
           G+CL+V NT TG +  VRIVDQC+NGGLDLD NVF  +DT+GNG  +GHLIV+Y+FV+C
Sbjct: 139 GKCLRVTNTRTGAQTTVRIVDQCSNGGLDLDVNVFRQIDTDGNGNHQGHLIVNYQFVDC 197

[Close]

BLAST of Sed0027146 vs. ExPASy Swiss-Prot
Match: P09762 (Wound-induced protein WIN2 OS=Solanum tuberosum OX=4113 GN=WIN2 PE=2 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 6.3e-49
Identity = 82/121 (67.77%), Postives = 99/121 (81.82%), Query Frame = 0


Query: 24  GQSATNVRATYNLYDPQNINWDYSRASVYCATWDADKPLEWRRRYGWTAFCGPVGPTGRD 83
           G SA NVRATY++Y+PQN+ WD +  S YC+TWDA+KP  WR +YGWTAFCGPVGP GRD
Sbjct: 76  GGSAQNVRATYHIYNPQNVGWDLNAVSAYCSTWDANKPYAWRSKYGWTAFCGPVGPRGRD 135

Query: 84  SCGRCLKVKNTETGDEQKVRIVDQCANGGLDLDYNVFMILDTNGNGIARGHLIVDYEFVN 143
           SCG+CL+V NT TG +  VRIVDQC+NGGLDLD NVF  +DT+G G  +GHLIV+Y+FVN
Sbjct: 136 SCGKCLRVTNTRTGAQTTVRIVDQCSNGGLDLDINVFQQIDTDGVGNQQGHLIVNYQFVN 195

Query: 144 C 145
           C
Sbjct: 196 C 196

[Close]

BLAST of Sed0027146 vs. ExPASy TrEMBL
Match: A0A5A7VCZ9 (Pathogenesis-related protein PR-4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold329G001120 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 6.3e-60
Identity = 104/142 (73.24%), Postives = 122/142 (85.92%), Query Frame = 0


Query: 3   KKSLVLMLGLSLWASLVGGAVGQSATNVRATYNLYDPQNINWDYSRASVYCATWDADKPL 62
           K+  +++  L+LWASL+G   GQSA+NV ATYN Y+PQ I W+Y  ASV+CATWDA+KPL
Sbjct: 2   KRGSLIVFALALWASLLGSGKGQSASNVIATYNFYNPQTIGWNYMTASVFCATWDANKPL 61

Query: 63  EWRRRYGWTAFCGPVGPTGRDSCGRCLKVKNTETGDEQKVRIVDQCANGGLDLDYNVFMI 122
            WR+ YGWTAFCGPVGPTGRDSCGRCL+V+NTETGDE+ VRIVDQC+NGGLDLDY+VF  
Sbjct: 62  NWRKHYGWTAFCGPVGPTGRDSCGRCLRVRNTETGDEETVRIVDQCSNGGLDLDYDVFKK 121

Query: 123 LDTNGNGIARGHLIVDYEFVNC 145
           LD+NGNG ARGHLIVDY FVNC
Sbjct: 122 LDSNGNGFARGHLIVDYHFVNC 143

[Close]

BLAST of Sed0027146 vs. ExPASy TrEMBL
Match: A0A0A0LJA9 (Barwin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010370 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 6.3e-60
Identity = 103/144 (71.53%), Postives = 124/144 (86.11%), Query Frame = 0


Query: 1   MEKKSLVLMLGLSLWASLVGGAVGQSATNVRATYNLYDPQNINWDYSRASVYCATWDADK 60
           M++ SL+++  L+LWASL+G   GQSA+NV ATYN Y+PQ I W+Y  ASV+C+TWDA+K
Sbjct: 1   MKRGSLIIIFALALWASLLGSGKGQSASNVLATYNFYNPQTIGWNYMTASVFCSTWDANK 60

Query: 61  PLEWRRRYGWTAFCGPVGPTGRDSCGRCLKVKNTETGDEQKVRIVDQCANGGLDLDYNVF 120
           PL WR+ YGWTAFCGPVGP+GR+SCGRCL+V+NTETGDE+ VRIVDQC+NGGLDLD+ VF
Sbjct: 61  PLNWRKHYGWTAFCGPVGPSGRNSCGRCLRVRNTETGDEETVRIVDQCSNGGLDLDFGVF 120

Query: 121 MILDTNGNGIARGHLIVDYEFVNC 145
             LDTNGNG ARGHLIVDY FVNC
Sbjct: 121 QKLDTNGNGFARGHLIVDYRFVNC 144

[Close]

BLAST of Sed0027146 vs. ExPASy TrEMBL
Match: A0A5D3D4G8 (Pathogenesis-related protein PR-4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001500 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.5e-56
Identity = 106/144 (73.61%), Postives = 123/144 (85.42%), Query Frame = 0


Query: 1   MEKKSLVLMLGLSLWASLVGGAVGQSATNVRATYNLYDPQNINWDYSRASVYCATWDADK 60
           MEK S++++L L+L   ++  A  QSATNVRATY+LY+PQ+INWDY RASV+CATWDA+K
Sbjct: 1   MEKGSIMMILVLAL--GVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANK 60

Query: 61  PLEWRRRYGWTAFCGPVGPTGRDSCGRCLKVKNTETGDEQKVRIVDQCANGGLDLDYNVF 120
           PLEWRRRYGWTAFCGPVGP GRDSCGRCL+V NTETG  + VRIVDQCANGGLDLD NVF
Sbjct: 61  PLEWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVF 120

Query: 121 MILDTNGNGIARGHLIVDYEFVNC 145
             +DTNGNG  RGHL V+Y+FVNC
Sbjct: 121 RRIDTNGNGNFRGHLTVNYQFVNC 142

[Close]

BLAST of Sed0027146 vs. ExPASy TrEMBL
Match: A0A0A0LIC8 (Barwin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010390 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.5e-56
Identity = 106/144 (73.61%), Postives = 123/144 (85.42%), Query Frame = 0


Query: 1   MEKKSLVLMLGLSLWASLVGGAVGQSATNVRATYNLYDPQNINWDYSRASVYCATWDADK 60
           M K S++++L L+L   ++  A  QSATNVRATY+LY+PQ+INWDY RASV+CATWDADK
Sbjct: 1   MGKGSIMMILVLAL--GVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDADK 60

Query: 61  PLEWRRRYGWTAFCGPVGPTGRDSCGRCLKVKNTETGDEQKVRIVDQCANGGLDLDYNVF 120
           PLEWRR+YGWTAFCGPVGP GRDSCGRCL+V NTETG  + VRIVDQCANGGLDLD NVF
Sbjct: 61  PLEWRRQYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVF 120

Query: 121 MILDTNGNGIARGHLIVDYEFVNC 145
             +DTNGNG  RGHLIV+Y+FVNC
Sbjct: 121 RRIDTNGNGNLRGHLIVNYQFVNC 142

[Close]

BLAST of Sed0027146 vs. ExPASy TrEMBL
Match: A0A1S3C3H6 (pathogenesis-related protein PR-4-like OS=Cucumis melo OX=3656 GN=LOC103496070 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.5e-56
Identity = 106/144 (73.61%), Postives = 123/144 (85.42%), Query Frame = 0


Query: 1   MEKKSLVLMLGLSLWASLVGGAVGQSATNVRATYNLYDPQNINWDYSRASVYCATWDADK 60
           MEK S++++L L+L   ++  A  QSATNVRATY+LY+PQ+INWDY RASV+CATWDA+K
Sbjct: 1   MEKGSIMMILVLAL--GVLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANK 60

Query: 61  PLEWRRRYGWTAFCGPVGPTGRDSCGRCLKVKNTETGDEQKVRIVDQCANGGLDLDYNVF 120
           PLEWRRRYGWTAFCGPVGP GRDSCGRCL+V NTETG  + VRIVDQCANGGLDLD NVF
Sbjct: 61  PLEWRRRYGWTAFCGPVGPRGRDSCGRCLRVTNTETGASEIVRIVDQCANGGLDLDVNVF 120

Query: 121 MILDTNGNGIARGHLIVDYEFVNC 145
             +DTNGNG  RGHL V+Y+FVNC
Sbjct: 121 RRIDTNGNGNFRGHLTVNYQFVNC 142

[Close]

BLAST of Sed0027146 vs. TAIR 10
Match: AT3G04720.1 (pathogenesis-related 4 )

HSP 1 Score: 181.8 bits (460), Expect = 3.9e-46
Identity = 80/130 (61.54%), Postives = 96/130 (73.85%), Query Frame = 0


Query: 15  WASLVGGAVGQSATNVRATYNLYDPQNINWDYSRASVYCATWDADKPLEWRRRYGWTAFC 74
           W S   G  G+SA+NVRATY+ Y+P   NWD    S YC+TWDADKP  WR +YGWTAFC
Sbjct: 63  WGSGPSGP-GESASNVRATYHFYNPAQNNWDLRAVSAYCSTWDADKPYAWRSKYGWTAFC 122

Query: 75  GPVGPTGRDSCGRCLKVKNTETGDEQKVRIVDQCANGGLDLDYNVFMILDTNGNGIARGH 134
           GP GP G+ SCG+CL+VKNT T     VRIVDQC+NGGLDLD  +F  +DT+G G  +GH
Sbjct: 123 GPAGPRGQASCGKCLRVKNTRTNAAVTVRIVDQCSNGGLDLDVAMFNQIDTDGFGYQQGH 182

Query: 135 LIVDYEFVNC 145
           LIVDY+FV+C
Sbjct: 183 LIVDYQFVDC 191

The following BLAST results are available for this feature:

BLAST of Sed0027146 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891021.1	3.4e-60	75.35	pathogenesis-related protein PR-4-like [Benincasa hispida]	[more]
XP_004139241.1	1.3e-59	71.53	pathogenesis-related protein PR-4 [Cucumis sativus] >KGN60802.1 hypothetical pro...	[more]
KAA0063601.1	1.3e-59	73.24	pathogenesis-related protein PR-4-like [Cucumis melo var. makuwa]	[more]
XP_031129054.1	2.3e-56	77.44	pathogenesis-related protein PR-4-like [Ipomoea triloba]	[more]
XP_008456018.1	5.1e-56	73.61	PREDICTED: pathogenesis-related protein PR-4-like [Cucumis melo] >KAA0063603.1 p...	[more]

BLAST of Sed0027146 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P32045	2.2e-54	78.05	Pathogenesis-related protein P2 OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]
P29063	4.2e-53	67.88	Pathogenesis-related protein PR-4B OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
P29062	2.7e-52	67.15	Pathogenesis-related protein PR-4A OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
P09761	9.7e-50	68.91	Wound-induced protein WIN1 OS=Solanum tuberosum OX=4113 GN=WIN1 PE=2 SV=1	[more]
P09762	6.3e-49	67.77	Wound-induced protein WIN2 OS=Solanum tuberosum OX=4113 GN=WIN2 PE=2 SV=1	[more]

BLAST of Sed0027146 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VCZ9	6.3e-60	73.24	Pathogenesis-related protein PR-4-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A0A0LJA9	6.3e-60	71.53	Barwin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010370 PE=4...	[more]
A0A5D3D4G8	2.5e-56	73.61	Pathogenesis-related protein PR-4-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A0A0LIC8	2.5e-56	73.61	Barwin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010390 PE=4...	[more]
A0A1S3C3H6	2.5e-56	73.61	pathogenesis-related protein PR-4-like OS=Cucumis melo OX=3656 GN=LOC103496070 P...	[more]

BLAST of Sed0027146 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04720.1	3.9e-46	61.54	pathogenesis-related 4	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001153	Barwin domain	PRINTS	PR00602	BARWIN	coord: 98..116 score: 72.98 coord: 79..97 score: 62.46 coord: 60..78 score: 79.3 coord: 119..143 score: 61.6
IPR001153	Barwin domain	PFAM	PF00967	Barwin	coord: 26..144 e-value: 9.4E-54 score: 180.4
IPR001153	Barwin domain	PROSITE	PS51174	BARWIN_3	coord: 25..144 score: 73.599777
IPR036908	RlpA-like domain superfamily	GENE3D	2.40.40.10		coord: 25..144 e-value: 9.3E-53 score: 179.2
IPR036908	RlpA-like domain superfamily	SUPERFAMILY	50685	Barwin-like endoglucanases	coord: 25..144
IPR044301	Pathogenesis-related protein-4	PANTHER	PTHR46351	WOUND-INDUCED PROTEIN WIN2	coord: 14..144
IPR018226	Barwin, conserved site	PROSITE	PS00772	BARWIN_2	coord: 137..144
IPR018226	Barwin, conserved site	PROSITE	PS00771	BARWIN_1	coord: 85..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0027146.1	Sed0027146.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0050832	defense response to fungus
biological_process	GO:0090501	RNA phosphodiester bond hydrolysis
biological_process	GO:0006952	defense response
molecular_function	GO:0004540	ribonuclease activity