Sed0027105 (gene) Chayote v1

Overview


Name	Sed0027105
Type	gene
Organism	Sechium edule (Chayote v1)
Description	ethylene-responsive transcription factor WIN1-like
Location	LG06: 45041480 .. 45042996 (+)
RNA-Seq Expression	Sed0027105
Synteny	Sed0027105

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAACAAAAGAAATGGAGAGGGGTGAGGCAACGCCGGTGGGGCTCATGTGTCTCTGAAATTCGTCACCTTTATTTTTCATCCCTCATTTCTTCTTTTCATTATTTCTAACACTTTTTTTTTTACTAAACCCTAAACTTTGGTTGTTCTTTTGTGTTTGTAGAAAGAGAAGGGTTTGGTTGGGGACGATCGAAACCGCCGAAGAAGCTGCCCGTGCCTACGACGAGGCTGCCCTTCTCATGAATGGTCGAACTGCCAAAACTAACTTTCCCGTGGCAACGACTATCGCTACGAGCTACGCAAGAAATTTTCGTAAACATTATCAACAAACTTCGTACTATCTCGAAGTTTTTTTAGTTAAAGAAATATGTGGAGACAATTTTAATTTTTGATTTGTTCTAAGGTATATATGTTTTAACTAGTTGAGTGATGTTTTTGTACTAACATTAAACAAAAAAAACAATCTTTTTCGTTTGGGTATATTAGTGTAGATTATATGTTTTAATGGTTAAATATATACTATTTTGGTTAATATATTCTAAACTTTTATTGATTTCAATGTTCTCTACTCGCAAAGCATCCATTTTTTTTTTTTATCGTTTACTTATAAAAAGCGATAGTTGTTTGGTGTTCATTTTAATCTCATTTTTTCATCATAATTTTATACTAGCACATTTGGCATAATAATTTTTTTGAAAAAAAAAATCATGAAATTGTATAAAAGATTTTTTTTTTTATTTTTTTAGTATATATTAGGGAAAGGGGGATCCATTCTCGGGCTTGATCCTGCGATGCTGGTGTTAAATTGGTTTACAAACAAACAATGAAACCATTGCCACTGACTCATTCGATTATATTTAAATTTTACTAAGTGAATCACAACTAACGTTTTGAAAAAAGTTTAAAATGATAAAAGTTGAATGGTTGAAATTAATACATGAATAAAAATAAATCAAAGTAGACAATGTGTACAAACATGAACAAAAATAGCATTTAAACATTTTTTTTAGTACAAGTTGAGAAAGGGAGACCACAAACCTTACTGAAAGAATACTACCTCTCGCAATTAAACTATCATGTAATCGATCCATTCGGTACTTAAATATTTTTTTTTTTATTTAAGAGAAATAAAGGCAATTGTTCCCTCTTTTCTTCTTTAGCTCCGGACCCAACCACCTCAAGCACGGTGTCGTCACAAGTATCCGACACTCTAAACGCCAAACTTCGCAAGTGTTACCAGTCGCTACCACCGTACCTAATGAACTTGTCTCCGTCTCGACACCGAGACTTGTGGCATCAGCGTCTGGCAGAGGCGTAGAGGACATCGACAAGTTCCCGACTCGAATTGGGTCATGATGGAGCAGCTTGAGAAGGAGAACAGCGACCAATTTCAAGTGACAAAGTCACATGAAAAGAACATAGAAGAAGTGAAGCTGACAAGGGCGAGAGAAAGTTTAGATAATGAAGAAAGAATTGCTTTGCAGATGATTGAAGAATTTTTTAATAAGATATGA

mRNA sequence

ATGGCGAAACAAAAGAAATGGAGAGGGGTGAGGCAACGCCGGTGGGGCTCATGTAGAAGGGTTTGGTTGGGGACGATCGAAACCGCCGAAGAAGCTGCCCGTGCCTACGACGAGGCTGCCCTTCTCATGAATGGTCGAACTGCCAAAACTAACTTTCCCGTGGCAACGACTATCGCTACGAGCTACGCAAGAAATTTTCCTCCGGACCCAACCACCTCAAGCACGGTGTCGTCACAAGTATCCGACACTCTAAACGCCAAACTTCGCAAGTGTTACCAGTCGCTACCACCGTACCTAATGAACTTCGTCTGGCAGAGGCGTAGAGGACATCGACAAGTTCCCGACTCGAATTGGGTCATGATGGAGCAGCTTGAGAAGGAGAACAGCGACCAATTTCAAGTGACAAAGTCACATGAAAAGAACATAGAAGAAGTGAAGCTGACAAGGGCGAGAGAAAGTTTAGATAATGAAGAAAGAATTGCTTTGCAGATGATTGAAGAATTTTTTAATAAGATATGA

Coding sequence (CDS)

ATGGCGAAACAAAAGAAATGGAGAGGGGTGAGGCAACGCCGGTGGGGCTCATGTAGAAGGGTTTGGTTGGGGACGATCGAAACCGCCGAAGAAGCTGCCCGTGCCTACGACGAGGCTGCCCTTCTCATGAATGGTCGAACTGCCAAAACTAACTTTCCCGTGGCAACGACTATCGCTACGAGCTACGCAAGAAATTTTCCTCCGGACCCAACCACCTCAAGCACGGTGTCGTCACAAGTATCCGACACTCTAAACGCCAAACTTCGCAAGTGTTACCAGTCGCTACCACCGTACCTAATGAACTTCGTCTGGCAGAGGCGTAGAGGACATCGACAAGTTCCCGACTCGAATTGGGTCATGATGGAGCAGCTTGAGAAGGAGAACAGCGACCAATTTCAAGTGACAAAGTCACATGAAAAGAACATAGAAGAAGTGAAGCTGACAAGGGCGAGAGAAAGTTTAGATAATGAAGAAAGAATTGCTTTGCAGATGATTGAAGAATTTTTTAATAAGATATGA

Protein sequence

MAKQKKWRGVRQRRWGSCRRVWLGTIETAEEAARAYDEAALLMNGRTAKTNFPVATTIATSYARNFPPDPTTSSTVSSQVSDTLNAKLRKCYQSLPPYLMNFVWQRRRGHRQVPDSNWVMMEQLEKENSDQFQVTKSHEKNIEEVKLTRARESLDNEERIALQMIEEFFNKI

Homology

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BLAST of Sed0027105 vs. NCBI nr
Match: XP_038876460.1 (ethylene-responsive transcription factor WIN1-like [Benincasa hispida])

HSP 1 Score: 170.2 bits (430), Expect = 1.5e-38
Identity = 107/193 (55.44%), Postives = 129/193 (66.84%), Query Frame = 0


Query: 3   KQKKWRGVRQRRWGSC----------RRVWLGTIETAEEAARAYDEAALLMNGRTAKTNF 62
           +Q K+RGVRQRRWGS           RRVWLGT ETAE+AARAYDEAA+LM+GRTAKTNF
Sbjct: 4   QQNKFRGVRQRRWGSWVSEIRHPLLKRRVWLGTFETAEDAARAYDEAAILMSGRTAKTNF 63

Query: 63  PVATTIATSYARNFPPDPTTSSTVSSQVSDTLNAKLRKCYQSLPPYLMNF---------- 122
           PV+T +  + ARN PP         S +S  LN KLRKC++SLPP L             
Sbjct: 64  PVSTAMVRTEARNIPP--------FSPLSTILNTKLRKCWKSLPPSLTCLRLDTESCRIG 123

Query: 123 VWQRRRGHRQVPDSNWVMMEQLEKENSDQFQVT-KSHEKNIEE-VKL-TRARESLDNEER 173
           VWQR  GH +V DS+WVMM +LEK+N+D F+VT +S E  +E+ V+L +   ESLD EER
Sbjct: 124 VWQRHVGHCRVVDSSWVMMVELEKKNNDGFRVTDESSENGVEDRVRLISDGTESLDEEER 183

[Close]

BLAST of Sed0027105 vs. NCBI nr
Match: XP_022153654.1 (ethylene-responsive transcription factor WIN1-like isoform X2 [Momordica charantia])

HSP 1 Score: 168.7 bits (426), Expect = 4.4e-38
Identity = 110/194 (56.70%), Postives = 126/194 (64.95%), Query Frame = 0


Query: 1   MAKQKKWRGVRQRRWGSC---------RRVWLGTIETAEEAARAYDEAALLMNGRTAKTN 60
           MAKQKK+RGVRQRRWGS          RRVWLGT ETAE+AARAYDEAA+LM+GRTAKTN
Sbjct: 1   MAKQKKFRGVRQRRWGSWFSSSSIFRKRRVWLGTFETAEDAARAYDEAAVLMSGRTAKTN 60

Query: 61  FPVATTIATSYARNFPPDPTTSSTVSSQVSDTLNAKLRKCYQSLPPYLMNF--------- 120
           FP+A   AT   R    D T SS V   +S  LNAKLRK  +S PP L            
Sbjct: 61  FPLAVA-ATDIVRAPTVDTTISSAVLPPLSSILNAKLRKFCESSPPSLTCLRLDTASCRI 120

Query: 121 -VWQRRRGHRQVPDSNWVMMEQLE-KENSDQFQVT--KSHEKNIEEVKLTRARESLDNEE 173
            VWQR  G R+V  SNWVMM +LE K+N D  +VT   S +  +EE+KL+ ARES D+EE
Sbjct: 121 GVWQRHAGRRRVAKSNWVMMVELEKKKNDDGLRVTMESSDKAGVEELKLSGARESSDDEE 180

[Close]

BLAST of Sed0027105 vs. NCBI nr
Match: XP_022153653.1 (ethylene-responsive transcription factor WIN1-like isoform X1 [Momordica charantia])

HSP 1 Score: 168.3 bits (425), Expect = 5.7e-38
Identity = 110/195 (56.41%), Postives = 126/195 (64.62%), Query Frame = 0


Query: 1   MAKQKKWRGVRQRRWGSC----------RRVWLGTIETAEEAARAYDEAALLMNGRTAKT 60
           MAKQKK+RGVRQRRWGS           RRVWLGT ETAE+AARAYDEAA+LM+GRTAKT
Sbjct: 1   MAKQKKFRGVRQRRWGSWVSEIRHPFLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAKT 60

Query: 61  NFPVATTIATSYARNFPPDPTTSSTVSSQVSDTLNAKLRKCYQSLPPYLMNF-------- 120
           NFP+A   AT   R    D T SS V   +S  LNAKLRK  +S PP L           
Sbjct: 61  NFPLAVA-ATDIVRAPTVDTTISSAVLPPLSSILNAKLRKFCESSPPSLTCLRLDTASCR 120

Query: 121 --VWQRRRGHRQVPDSNWVMMEQLE-KENSDQFQVT--KSHEKNIEEVKLTRARESLDNE 173
             VWQR  G R+V  SNWVMM +LE K+N D  +VT   S +  +EE+KL+ ARES D+E
Sbjct: 121 IGVWQRHAGRRRVAKSNWVMMVELEKKKNDDGLRVTMESSDKAGVEELKLSGARESSDDE 180

[Close]

BLAST of Sed0027105 vs. NCBI nr
Match: XP_004152351.1 (ethylene-responsive transcription factor WIN1 [Cucumis sativus] >KGN52887.1 hypothetical protein Csa_014569 [Cucumis sativus])

HSP 1 Score: 156.8 bits (395), Expect = 1.7e-34
Identity = 104/197 (52.79%), Postives = 129/197 (65.48%), Query Frame = 0


Query: 1   MAK-QKKWRGVRQRRWGSC----------RRVWLGTIETAEEAARAYDEAALLMNGRTAK 60
           MAK QKK+RGVRQRRWGS           +RVWLGT ETAE+AARAYDEAA+LM+GRTAK
Sbjct: 1   MAKQQKKFRGVRQRRWGSWVSEIRHPLLKKRVWLGTFETAEDAARAYDEAAILMSGRTAK 60

Query: 61  TNFPVATTIATSYARNFPPDPTTSSTVSSQVSDTLNAKLRKCY-QSLPPYLMNF------ 120
           TNFP++T + T+ +RNF P           +S  LN+KLRK Y +SLPP L         
Sbjct: 61  TNFPLSTAVVTNESRNFAP--------FGSLSAILNSKLRKGYCKSLPPSLTCLRLDTKS 120

Query: 121 ----VWQRRRGHRQVPDSNWVMMEQL-EKENSDQFQVTKSH--EKNIE-EVKLTRARESL 172
               VWQRR G  +V +SNW+MM +L EK+N D+++VT     EK +E EV+++    SL
Sbjct: 121 CQIGVWQRRTGRYRVVNSNWLMMVKLDEKKNDDEYRVTDHELLEKGVEDEVRVSNEAGSL 180

[Close]

BLAST of Sed0027105 vs. NCBI nr
Match: XP_008454492.1 (PREDICTED: ethylene-responsive transcription factor WIN1-like [Cucumis melo] >KAA0044439.1 ethylene-responsive transcription factor WIN1-like [Cucumis melo var. makuwa] >TYK29566.1 ethylene-responsive transcription factor WIN1-like [Cucumis melo var. makuwa])

HSP 1 Score: 154.5 bits (389), Expect = 8.6e-34
Identity = 105/201 (52.24%), Postives = 127/201 (63.18%), Query Frame = 0


Query: 1   MAK-QKKWRGVRQRRWGSC----------RRVWLGTIETAEEAARAYDEAALLMNGRTAK 60
           MAK QKK+RGVRQRRWGS           RRVWLGT ETAE+AARAYDEAA+LM+GRTAK
Sbjct: 1   MAKQQKKFRGVRQRRWGSWVSEIRHPLLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAK 60

Query: 61  TNFPVATTIATSYARNFPPDPTTSSTVSSQVSDTLNAKLRKCY-QSLPPYLMNF------ 120
           TNFP++T +  + +RNF        +  S +S  LN+KLRK Y +SLPP+L         
Sbjct: 61  TNFPLSTVMVRNESRNF--------SSFSSLSTILNSKLRKGYWKSLPPFLTCLRLDTEN 120

Query: 121 ----VWQRRRGHRQVPDSNWVMMEQL-EKENSDQFQVTKSH--EKNIEEVKLTRARE--- 173
               VWQRR G  +V DSNW+MM +L EK+N D +QVT     E  +E+    R  +   
Sbjct: 121 CRIGVWQRRTGRYRVVDSNWLMMVELDEKKNDDGYQVTTDELLENGVEDDHQVRVSDDGA 180

[Close]

BLAST of Sed0027105 vs. ExPASy Swiss-Prot
Match: Q9XI33 (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN=WIN1 PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 7.3e-28
Identity = 93/199 (46.73%), Postives = 117/199 (58.79%), Query Frame = 0


Query: 1   MAKQKKWRGVRQRRWGSC----------RRVWLGTIETAEEAARAYDEAALLMNGRTAKT 60
           M + KK+RGVRQR WGS           RR+WLGT ETAEEAARAYDEAA+LM+GR AKT
Sbjct: 1   MVQTKKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKT 60

Query: 61  NFPV--ATTIATSYARNFPPDPTT--SSTVSSQVSDTLNAKLRKCYQSLPPYLMNF---- 120
           NFP+    T  TS  +      +T  SST SS +S  L+AKLRKC +S  P L       
Sbjct: 61  NFPLNNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKCCKSPSPSLTCLRLDT 120

Query: 121 ------VWQRRRGHRQVPDSNWVMMEQLEKENSDQFQVTKSHEKNI----EEVKLTRARE 171
                 VWQ+R G +   DS+WVM  +L   +S Q   +K+ +  I     EV++  +RE
Sbjct: 121 ASSHIGVWQKRAGSKS--DSSWVMTVELGPASSSQETTSKASQDAILAPTTEVEIGGSRE 180

[Close]

BLAST of Sed0027105 vs. ExPASy Swiss-Prot
Match: Q9LFN7 (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702 GN=SHN2 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.3e-21
Identity = 75/193 (38.86%), Postives = 106/193 (54.92%), Query Frame = 0


Query: 1   MAKQKKWRGVRQRRWGSC----------RRVWLGTIETAEEAARAYDEAALLMNGRTAKT 60
           M   +K+RGVRQR+WGS           RRVWLGT ETAE AARAYD+AALLMNG+ AKT
Sbjct: 1   MVHSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKT 60

Query: 61  NFPVATTIATSYARNFPPDPTTSSTVSSQVSDTLNAKLRKCYQSLPPYLMNF-------- 120
           NFPV   + +    +   D  +       +S+ LNAKLRK  + L P L           
Sbjct: 61  NFPV---VKSEEGSDHVKDVNSPLMSPKSLSELLNAKLRKSCKDLTPSLTCLRLDTDSSH 120

Query: 121 --VWQRRRGHRQVPDSNWVMMEQL---EKENSDQFQVTKSHEKNIEEVKLTRARESLDNE 171
             VWQ+R G +  P   WVM  +L     E++    +T  +++N+E+ +       + +E
Sbjct: 121 IGVWQKRAGSKTSP--TWVMRLELGNVVNESAVDLGLTTMNKQNVEKEE-EEEEAIISDE 180

[Close]

BLAST of Sed0027105 vs. ExPASy Swiss-Prot
Match: Q3E958 (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702 GN=SHN3 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 3.0e-21
Identity = 77/190 (40.53%), Postives = 105/190 (55.26%), Query Frame = 0


Query: 1   MAKQKKWRGVRQRRWGSC----------RRVWLGTIETAEEAARAYDEAALLMNGRTAKT 60
           M   KK+RGVRQR+WGS           RRVWLGT +TAE AARAYD+AA+LMNG++AKT
Sbjct: 1   MVHSKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKT 60

Query: 61  NFPVATTIATSYARNFPPDPTTSSTVSSQVSDTLNAKLRKCYQSLPPYLMNF-------- 120
           NFPV   I ++ + +   +    S  S  +S+ LNAKLRK  +   PYL           
Sbjct: 61  NFPV---IKSNGSNSLEINSALRSPKS--LSELLNAKLRKNCKDQTPYLTCLRLDNDSSH 120

Query: 121 --VWQRRRGHRQVPDSNWVMMEQLEKENSDQFQVTKSHEKNIEEVKLTRARESLDNEERI 171
             VWQ+R G +  P  NWV + +L        +V      +IE  K+    E +  ++++
Sbjct: 121 IGVWQKRAGSKTSP--NWVKLVELGD------KVNARPGGDIETNKMKVRNEDVQEDDQM 177

[Close]

BLAST of Sed0027105 vs. ExPASy Swiss-Prot
Match: Q94AW5 (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 GN=ERF003 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.0e-13
Identity = 50/101 (49.50%), Postives = 60/101 (59.41%), Query Frame = 0


Query: 4  QKKWRGVRQRRWGSC----------RRVWLGTIETAEEAARAYDEAALLMNGRTAKTNFP 63
          Q+++RGVRQR WGS            R+WLGT ETAE+AARAYDEAA LM G  A+TNFP
Sbjct: 5  QQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFP 64

Query: 64 VATTIATSYARNFPPDPTTSSTVSSQVSDTLNAKLRKCYQS 95
                     N    PT+SS +   +S TL AKL KCY +
Sbjct: 65 Y----------NPNAIPTSSSKL---LSATLTAKLHKCYMA 92

[Close]

BLAST of Sed0027105 vs. ExPASy Swiss-Prot
Match: P16146 (Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.8e-11
Identity = 45/101 (44.55%), Postives = 59/101 (58.42%), Query Frame = 0


Query: 4  QKKWRGVRQRRWGSC----------RRVWLGTIETAEEAARAYDEAALLMNGRTAKTNFP 63
          Q+++RG RQR WGS            R+W GT E+AE+AARAYDEAA LM G  A+TNFP
Sbjct: 5  QQRYRGFRQRHWGSWVSEIRHSILKTRIWQGTFESAEDAARAYDEAARLMCGTRARTNFP 64

Query: 64 VATTIATSYARNFPPDPTTSSTVSSQVSDTLNAKLRKCYQS 95
                      + P+ + SS+ S  +S TL AKL +CY +
Sbjct: 65 ------------YNPNASQSSS-SKLLSATLIAKLHRCYMA 92

[Close]

BLAST of Sed0027105 vs. ExPASy TrEMBL
Match: A0A6J1DJQ0 (ethylene-responsive transcription factor WIN1-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111021107 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 2.1e-38
Identity = 110/194 (56.70%), Postives = 126/194 (64.95%), Query Frame = 0


Query: 1   MAKQKKWRGVRQRRWGSC---------RRVWLGTIETAEEAARAYDEAALLMNGRTAKTN 60
           MAKQKK+RGVRQRRWGS          RRVWLGT ETAE+AARAYDEAA+LM+GRTAKTN
Sbjct: 1   MAKQKKFRGVRQRRWGSWFSSSSIFRKRRVWLGTFETAEDAARAYDEAAVLMSGRTAKTN 60

Query: 61  FPVATTIATSYARNFPPDPTTSSTVSSQVSDTLNAKLRKCYQSLPPYLMNF--------- 120
           FP+A   AT   R    D T SS V   +S  LNAKLRK  +S PP L            
Sbjct: 61  FPLAVA-ATDIVRAPTVDTTISSAVLPPLSSILNAKLRKFCESSPPSLTCLRLDTASCRI 120

Query: 121 -VWQRRRGHRQVPDSNWVMMEQLE-KENSDQFQVT--KSHEKNIEEVKLTRARESLDNEE 173
            VWQR  G R+V  SNWVMM +LE K+N D  +VT   S +  +EE+KL+ ARES D+EE
Sbjct: 121 GVWQRHAGRRRVAKSNWVMMVELEKKKNDDGLRVTMESSDKAGVEELKLSGARESSDDEE 180

[Close]

BLAST of Sed0027105 vs. ExPASy TrEMBL
Match: A0A6J1DI23 (ethylene-responsive transcription factor WIN1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021107 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 2.8e-38
Identity = 110/195 (56.41%), Postives = 126/195 (64.62%), Query Frame = 0


Query: 1   MAKQKKWRGVRQRRWGSC----------RRVWLGTIETAEEAARAYDEAALLMNGRTAKT 60
           MAKQKK+RGVRQRRWGS           RRVWLGT ETAE+AARAYDEAA+LM+GRTAKT
Sbjct: 1   MAKQKKFRGVRQRRWGSWVSEIRHPFLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAKT 60

Query: 61  NFPVATTIATSYARNFPPDPTTSSTVSSQVSDTLNAKLRKCYQSLPPYLMNF-------- 120
           NFP+A   AT   R    D T SS V   +S  LNAKLRK  +S PP L           
Sbjct: 61  NFPLAVA-ATDIVRAPTVDTTISSAVLPPLSSILNAKLRKFCESSPPSLTCLRLDTASCR 120

Query: 121 --VWQRRRGHRQVPDSNWVMMEQLE-KENSDQFQVT--KSHEKNIEEVKLTRARESLDNE 173
             VWQR  G R+V  SNWVMM +LE K+N D  +VT   S +  +EE+KL+ ARES D+E
Sbjct: 121 IGVWQRHAGRRRVAKSNWVMMVELEKKKNDDGLRVTMESSDKAGVEELKLSGARESSDDE 180

[Close]

BLAST of Sed0027105 vs. ExPASy TrEMBL
Match: A0A0A0KWT0 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G004960 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 8.4e-35
Identity = 104/197 (52.79%), Postives = 129/197 (65.48%), Query Frame = 0


Query: 1   MAK-QKKWRGVRQRRWGSC----------RRVWLGTIETAEEAARAYDEAALLMNGRTAK 60
           MAK QKK+RGVRQRRWGS           +RVWLGT ETAE+AARAYDEAA+LM+GRTAK
Sbjct: 1   MAKQQKKFRGVRQRRWGSWVSEIRHPLLKKRVWLGTFETAEDAARAYDEAAILMSGRTAK 60

Query: 61  TNFPVATTIATSYARNFPPDPTTSSTVSSQVSDTLNAKLRKCY-QSLPPYLMNF------ 120
           TNFP++T + T+ +RNF P           +S  LN+KLRK Y +SLPP L         
Sbjct: 61  TNFPLSTAVVTNESRNFAP--------FGSLSAILNSKLRKGYCKSLPPSLTCLRLDTKS 120

Query: 121 ----VWQRRRGHRQVPDSNWVMMEQL-EKENSDQFQVTKSH--EKNIE-EVKLTRARESL 172
               VWQRR G  +V +SNW+MM +L EK+N D+++VT     EK +E EV+++    SL
Sbjct: 121 CQIGVWQRRTGRYRVVNSNWLMMVKLDEKKNDDEYRVTDHELLEKGVEDEVRVSNEAGSL 180

[Close]

BLAST of Sed0027105 vs. ExPASy TrEMBL
Match: A0A5A7TT91 (Ethylene-responsive transcription factor WIN1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001720 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 4.1e-34
Identity = 105/201 (52.24%), Postives = 127/201 (63.18%), Query Frame = 0


Query: 1   MAK-QKKWRGVRQRRWGSC----------RRVWLGTIETAEEAARAYDEAALLMNGRTAK 60
           MAK QKK+RGVRQRRWGS           RRVWLGT ETAE+AARAYDEAA+LM+GRTAK
Sbjct: 1   MAKQQKKFRGVRQRRWGSWVSEIRHPLLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAK 60

Query: 61  TNFPVATTIATSYARNFPPDPTTSSTVSSQVSDTLNAKLRKCY-QSLPPYLMNF------ 120
           TNFP++T +  + +RNF        +  S +S  LN+KLRK Y +SLPP+L         
Sbjct: 61  TNFPLSTVMVRNESRNF--------SSFSSLSTILNSKLRKGYWKSLPPFLTCLRLDTEN 120

Query: 121 ----VWQRRRGHRQVPDSNWVMMEQL-EKENSDQFQVTKSH--EKNIEEVKLTRARE--- 173
               VWQRR G  +V DSNW+MM +L EK+N D +QVT     E  +E+    R  +   
Sbjct: 121 CRIGVWQRRTGRYRVVDSNWLMMVELDEKKNDDGYQVTTDELLENGVEDDHQVRVSDDGA 180

[Close]

BLAST of Sed0027105 vs. ExPASy TrEMBL
Match: A0A1S3BYV0 (ethylene-responsive transcription factor WIN1-like OS=Cucumis melo OX=3656 GN=LOC103494890 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 4.1e-34
Identity = 105/201 (52.24%), Postives = 127/201 (63.18%), Query Frame = 0


Query: 1   MAK-QKKWRGVRQRRWGSC----------RRVWLGTIETAEEAARAYDEAALLMNGRTAK 60
           MAK QKK+RGVRQRRWGS           RRVWLGT ETAE+AARAYDEAA+LM+GRTAK
Sbjct: 1   MAKQQKKFRGVRQRRWGSWVSEIRHPLLKRRVWLGTFETAEDAARAYDEAAVLMSGRTAK 60

Query: 61  TNFPVATTIATSYARNFPPDPTTSSTVSSQVSDTLNAKLRKCY-QSLPPYLMNF------ 120
           TNFP++T +  + +RNF        +  S +S  LN+KLRK Y +SLPP+L         
Sbjct: 61  TNFPLSTVMVRNESRNF--------SSFSSLSTILNSKLRKGYWKSLPPFLTCLRLDTEN 120

Query: 121 ----VWQRRRGHRQVPDSNWVMMEQL-EKENSDQFQVTKSH--EKNIEEVKLTRARE--- 173
               VWQRR G  +V DSNW+MM +L EK+N D +QVT     E  +E+    R  +   
Sbjct: 121 CRIGVWQRRTGRYRVVDSNWLMMVELDEKKNDDGYQVTTDELLENGVEDDHQVRVSDDGA 180

[Close]

BLAST of Sed0027105 vs. TAIR 10
Match: AT1G15360.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 125.2 bits (313), Expect = 5.2e-29
Identity = 93/199 (46.73%), Postives = 117/199 (58.79%), Query Frame = 0


Query: 1   MAKQKKWRGVRQRRWGSC----------RRVWLGTIETAEEAARAYDEAALLMNGRTAKT 60
           M + KK+RGVRQR WGS           RR+WLGT ETAEEAARAYDEAA+LM+GR AKT
Sbjct: 1   MVQTKKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKT 60

Query: 61  NFPV--ATTIATSYARNFPPDPTT--SSTVSSQVSDTLNAKLRKCYQSLPPYLMNF---- 120
           NFP+    T  TS  +      +T  SST SS +S  L+AKLRKC +S  P L       
Sbjct: 61  NFPLNNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKCCKSPSPSLTCLRLDT 120

Query: 121 ------VWQRRRGHRQVPDSNWVMMEQLEKENSDQFQVTKSHEKNI----EEVKLTRARE 171
                 VWQ+R G +   DS+WVM  +L   +S Q   +K+ +  I     EV++  +RE
Sbjct: 121 ASSHIGVWQKRAGSKS--DSSWVMTVELGPASSSQETTSKASQDAILAPTTEVEIGGSRE 180

[Close]

BLAST of Sed0027105 vs. TAIR 10
Match: AT5G11190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 104.4 bits (259), Expect = 9.5e-23
Identity = 75/193 (38.86%), Postives = 106/193 (54.92%), Query Frame = 0


Query: 1   MAKQKKWRGVRQRRWGSC----------RRVWLGTIETAEEAARAYDEAALLMNGRTAKT 60
           M   +K+RGVRQR+WGS           RRVWLGT ETAE AARAYD+AALLMNG+ AKT
Sbjct: 1   MVHSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKT 60

Query: 61  NFPVATTIATSYARNFPPDPTTSSTVSSQVSDTLNAKLRKCYQSLPPYLMNF-------- 120
           NFPV   + +    +   D  +       +S+ LNAKLRK  + L P L           
Sbjct: 61  NFPV---VKSEEGSDHVKDVNSPLMSPKSLSELLNAKLRKSCKDLTPSLTCLRLDTDSSH 120

Query: 121 --VWQRRRGHRQVPDSNWVMMEQL---EKENSDQFQVTKSHEKNIEEVKLTRARESLDNE 171
             VWQ+R G +  P   WVM  +L     E++    +T  +++N+E+ +       + +E
Sbjct: 121 IGVWQKRAGSKTSP--TWVMRLELGNVVNESAVDLGLTTMNKQNVEKEE-EEEEAIISDE 180

[Close]

BLAST of Sed0027105 vs. TAIR 10
Match: AT5G25390.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 103.2 bits (256), Expect = 2.1e-22
Identity = 77/190 (40.53%), Postives = 105/190 (55.26%), Query Frame = 0


Query: 1   MAKQKKWRGVRQRRWGSC----------RRVWLGTIETAEEAARAYDEAALLMNGRTAKT 60
           M   KK+RGVRQR+WGS           RRVWLGT +TAE AARAYD+AA+LMNG++AKT
Sbjct: 1   MVHSKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKT 60

Query: 61  NFPVATTIATSYARNFPPDPTTSSTVSSQVSDTLNAKLRKCYQSLPPYLMNF-------- 120
           NFPV   I ++ + +   +    S  S  +S+ LNAKLRK  +   PYL           
Sbjct: 61  NFPV---IKSNGSNSLEINSALRSPKS--LSELLNAKLRKNCKDQTPYLTCLRLDNDSSH 120

Query: 121 --VWQRRRGHRQVPDSNWVMMEQLEKENSDQFQVTKSHEKNIEEVKLTRARESLDNEERI 171
             VWQ+R G +  P  NWV + +L        +V      +IE  K+    E +  ++++
Sbjct: 121 IGVWQKRAGSKTSP--NWVKLVELGD------KVNARPGGDIETNKMKVRNEDVQEDDQM 177

[Close]

BLAST of Sed0027105 vs. TAIR 10
Match: AT5G25390.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 99.0 bits (245), Expect = 4.0e-21
Identity = 75/187 (40.11%), Postives = 103/187 (55.08%), Query Frame = 0


Query: 1   MAKQKKWRGVRQRRWGSC-------RRVWLGTIETAEEAARAYDEAALLMNGRTAKTNFP 60
           M   KK+RGVRQR+WGS          VWLGT +TAE AARAYD+AA+LMNG++AKTNFP
Sbjct: 1   MVHSKKFRGVRQRQWGSWVSEIRHPLLVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFP 60

Query: 61  VATTIATSYARNFPPDPTTSSTVSSQVSDTLNAKLRKCYQSLPPYLMNF----------V 120
           V   I ++ + +   +    S  S  +S+ LNAKLRK  +   PYL             V
Sbjct: 61  V---IKSNGSNSLEINSALRSPKS--LSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGV 120

Query: 121 WQRRRGHRQVPDSNWVMMEQLEKENSDQFQVTKSHEKNIEEVKLTRARESLDNEERIALQ 171
           WQ+R G +  P  NWV + +L        +V      +IE  K+    E +  ++++A+Q
Sbjct: 121 WQKRAGSKTSP--NWVKLVELGD------KVNARPGGDIETNKMKVRNEDVQEDDQMAMQ 174

[Close]

BLAST of Sed0027105 vs. TAIR 10
Match: AT5G25190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 76.6 bits (187), Expect = 2.1e-14
Identity = 50/101 (49.50%), Postives = 60/101 (59.41%), Query Frame = 0


Query: 4  QKKWRGVRQRRWGSC----------RRVWLGTIETAEEAARAYDEAALLMNGRTAKTNFP 63
          Q+++RGVRQR WGS            R+WLGT ETAE+AARAYDEAA LM G  A+TNFP
Sbjct: 5  QQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFP 64

Query: 64 VATTIATSYARNFPPDPTTSSTVSSQVSDTLNAKLRKCYQS 95
                     N    PT+SS +   +S TL AKL KCY +
Sbjct: 65 Y----------NPNAIPTSSSKL---LSATLTAKLHKCYMA 92

The following BLAST results are available for this feature:

BLAST of Sed0027105 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876460.1	1.5e-38	55.44	ethylene-responsive transcription factor WIN1-like [Benincasa hispida]	[more]
XP_022153654.1	4.4e-38	56.70	ethylene-responsive transcription factor WIN1-like isoform X2 [Momordica charant...	[more]
XP_022153653.1	5.7e-38	56.41	ethylene-responsive transcription factor WIN1-like isoform X1 [Momordica charant...	[more]
XP_004152351.1	1.7e-34	52.79	ethylene-responsive transcription factor WIN1 [Cucumis sativus] >KGN52887.1 hypo...	[more]
XP_008454492.1	8.6e-34	52.24	PREDICTED: ethylene-responsive transcription factor WIN1-like [Cucumis melo] >KA...	[more]

BLAST of Sed0027105 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XI33	7.3e-28	46.73	Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9LFN7	1.3e-21	38.86	Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702...	[more]
Q3E958	3.0e-21	40.53	Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702...	[more]
Q94AW5	3.0e-13	49.50	Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 ...	[more]
P16146	2.8e-11	44.55	Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1	[more]

BLAST of Sed0027105 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DJQ0	2.1e-38	56.70	ethylene-responsive transcription factor WIN1-like isoform X2 OS=Momordica chara...	[more]
A0A6J1DI23	2.8e-38	56.41	ethylene-responsive transcription factor WIN1-like isoform X1 OS=Momordica chara...	[more]
A0A0A0KWT0	8.4e-35	52.79	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G004960 PE=...	[more]
A0A5A7TT91	4.1e-34	52.24	Ethylene-responsive transcription factor WIN1-like OS=Cucumis melo var. makuwa O...	[more]
A0A1S3BYV0	4.1e-34	52.24	ethylene-responsive transcription factor WIN1-like OS=Cucumis melo OX=3656 GN=LO...	[more]

BLAST of Sed0027105 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15360.1	5.2e-29	46.73	Integrase-type DNA-binding superfamily protein	[more]
AT5G11190.1	9.5e-23	38.86	Integrase-type DNA-binding superfamily protein	[more]
AT5G25390.2	2.1e-22	40.53	Integrase-type DNA-binding superfamily protein	[more]
AT5G25390.1	4.0e-21	40.11	Integrase-type DNA-binding superfamily protein	[more]
AT5G25190.1	2.1e-14	49.50	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 6..59 e-value: 2.5E-20 score: 83.6
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 3..45 e-value: 4.2E-6 score: 26.9
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 6..53 score: 14.578611
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 5..55 e-value: 6.95064E-21 score: 79.2379
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 5..55 e-value: 9.1E-14 score: 53.4
None	No IPR available	PANTHER	PTHR31194	SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR	coord: 1..171
None	No IPR available	PANTHER	PTHR31194:SF134	ETHYLENE RESPONSE FACTOR	coord: 1..171
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 6..54

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0027105.1	Sed0027105.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity