Sed0027059 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCTAATTTCCTCTGTTTTTCTCTTCCACTTGCATTGTTTTTATCACTCCATTTCTTCTCTGCAACTTCAACTGAATTCCTTGTTGGTGATGAAGATGGTTGGGCTGTCCCTGACCCAAAACAAGCTGATACATACAACAAATGGGCCTCACACAACAGATTCAATGTTAATGACACTGTCCGTAAGTGCTTGTTTTGATATCATTTCTCTAACTTGAACACAATTGTTTGTTTCTTCCTTTTTTGCTAATGTTTTGTTTGAGTTTGAGAGACTGTCTTTAGAAAGAGTAAATTTTGGTTTTCACCCATGAAAACCCATTTTTCTGAAATTCCAAATTTTATCATCCTAGGAAAATACATGAATGTGCTTTCAAGTAGAAGCAGTTTTCAATGAAAAGCACCCTTTTTTTTCAGTGGCTATCTTGAACTTACCCTTGATCTTTAAGTTGATGACATTATCTGTAAGTATATGCAACATATATCATAACAAAAATGATCCTTTTGTGCTATATCTTGGGGGTGAGTTTGATCAGACTATCTTTTGGAAGGCTATATTTTGCTTAACCCATTGAACCCCATTCTCCAAATTTTAAATTTGACATTTCAAATACTCAAAATCACTTTTGCTCTTATGTAATCTCACCTTTCACCTTTAAGTACATGATCCGAGTTAGGTTCGGTTAGAGGTATTTTTGCCGGAATTGGATTGGGTTTTATCTCATTTTTCTTTTTTAAGATTCAACTCATAGCCCATAAACAAAAAATAATGCATAATAATATTATAATTAAATCCTAAGAAGCGCGGACACGAACACGAGATACGGATAAGACACGACACAGACACGTAGATACGACATTATTTAAAAATGCAGGTACGTCGAGGACAAGTGATTTATTATTATTTTTTATAATATACTATTAAAAAATGAAATCTAGAATATTTTAGTTAGTTATAAGCCTATCCATAACAATCTCTAAATATTTTTAGTTTTTATCTCATTTTCTTTTCCTCCATTTTATTTTCTCTCTTTCTTTCATTTTTTCATTTTAGTCCATCTATCTTTGATAGACATCGTTGTCGACGGCCTCCACCAACACTATCTGTTGTCGTGTCATCCACCATTGGAAACAAATAAGTCTTAATTGAGGTGTCCATGAAGTGTCCGAAATTGAAAATAATAATAATAAAAGAGGATACAAAATTTTGAGTGTTAGACACGTGTCCGACGAGTGTCCAGAAGTATCGGTGTTGGACACGAGTACGACATGGATACGTTGTCAAAATAGAAGTGTCTTGATTCCTAGATTAAATCTAGGATATACATCTTATTAGAGCATATTTTTTACAAGTATGCTAGTCAAACTGTCTTTTTAATTAATCACTCTACTATATATAACTTTTAGTTTGATTTAGAACGAGCTCAATGTGTCCCCAAGGGGTCGCCCAGCGGTTGAGCCTAAGGACTTCCAAGACATGCTTCCTTGAGAGATTACTGGTTCAAGGTCACTGGAAAGTTCTTAACTAGAATATTTTTTGAAGTATTTTGGTGCCACAGTCTAGGGATGTGCTAGTGTGGGTATAGGGGAGCAAAACTCCAATTTCCTGGTTTTCAAAAAAAAAAAAAAAAAACGAGCTCAACATTGTTGTACCTGAGAACCGAACAAACCCAACAAAAACTATACAAACATAACCCAACCCGAGAATGGTCGAGGTTGGTCGACTTGTCAATTTCTTTGTACACCCCTACCTCTAATGATCCTACGATGTACTGGTGTATTGTCAGGTTTCAAGTACGAGAAAGATTCAGTGATGGAGGTGACAGAGGAAGAGTACAAGCAATGCCTTTCTTCAAAGCCTGTGATGTATGGCAGCAATGGTGACACAGTGGTGAAGCTTGACAGAGCAGGGCTCTTCTATTTCATCAGTGGAGTTTCAGGCCACTGTCACAAAGGCCAGAGAATGATAATCAAAGTGTTGGAACCTCTCGCCCCTCCTCACCCACCCACTGTTGCTCCACCCCATACCAACAACAGTGCAGCCTCTGTTTCATTTCCAATCATGGGGATGTTCTTCATGTTCTTTGTTTCCTTTCTCTTCATTTGA ATGGCTTCTAATTTCCTCTGTTTTTCTCTTCCACTTGCATTGTTTTTATCACTCCATTTCTTCTCTGCAACTTCAACTGAATTCCTTGTTGGTGATGAAGATGGTTGGGCTGTCCCTGACCCAAAACAAGCTGATACATACAACAAATGGGCCTCACACAACAGATTCAATGTTAATGACACTGTCCGTTTCAAGTACGAGAAAGATTCAGTGATGGAGGTGACAGAGGAAGAGTACAAGCAATGCCTTTCTTCAAAGCCTGTGATGTATGGCAGCAATGGTGACACAGTGGTGAAGCTTGACAGAGCAGGGCTCTTCTATTTCATCAGTGGAGTTTCAGGCCACTGTCACAAAGGCCAGAGAATGATAATCAAAGTGTTGGAACCTCTCGCCCCTCCTCACCCACCCACTGTTGCTCCACCCCATACCAACAACAGTGCAGCCTCTGTTTCATTTCCAATCATGGGGATGTTCTTCATGTTCTTTGTTTCCTTTCTCTTCATTTGA ATGGCTTCTAATTTCCTCTGTTTTTCTCTTCCACTTGCATTGTTTTTATCACTCCATTTCTTCTCTGCAACTTCAACTGAATTCCTTGTTGGTGATGAAGATGGTTGGGCTGTCCCTGACCCAAAACAAGCTGATACATACAACAAATGGGCCTCACACAACAGATTCAATGTTAATGACACTGTCCGTTTCAAGTACGAGAAAGATTCAGTGATGGAGGTGACAGAGGAAGAGTACAAGCAATGCCTTTCTTCAAAGCCTGTGATGTATGGCAGCAATGGTGACACAGTGGTGAAGCTTGACAGAGCAGGGCTCTTCTATTTCATCAGTGGAGTTTCAGGCCACTGTCACAAAGGCCAGAGAATGATAATCAAAGTGTTGGAACCTCTCGCCCCTCCTCACCCACCCACTGTTGCTCCACCCCATACCAACAACAGTGCAGCCTCTGTTTCATTTCCAATCATGGGGATGTTCTTCATGTTCTTTGTTTCCTTTCTCTTCATTTGA MASNFLCFSLPLALFLSLHFFSATSTEFLVGDEDGWAVPDPKQADTYNKWASHNRFNVNDTVRFKYEKDSVMEVTEEEYKQCLSSKPVMYGSNGDTVVKLDRAGLFYFISGVSGHCHKGQRMIIKVLEPLAPPHPPTVAPPHTNNSAASVSFPIMGMFFMFFVSFLFI Homology
BLAST of Sed0027059 vs. NCBI nr
Match: XP_022955289.1 (mavicyanin-like [Cucurbita moschata] >KAG6572925.1 Early nodulin-like protein 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012109.1 Early nodulin-like protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 250.4 bits (638), Expect = 1.1e-62 Identity = 122/155 (78.71%), Postives = 135/155 (87.10%), Query Frame = 0
BLAST of Sed0027059 vs. NCBI nr
Match: XP_022137490.1 (mavicyanin-like [Momordica charantia]) HSP 1 Score: 249.2 bits (635), Expect = 2.5e-62 Identity = 132/175 (75.43%), Postives = 145/175 (82.86%), Query Frame = 0
BLAST of Sed0027059 vs. NCBI nr
Match: XP_022994149.1 (mavicyanin-like [Cucurbita maxima]) HSP 1 Score: 249.2 bits (635), Expect = 2.5e-62 Identity = 121/155 (78.06%), Postives = 135/155 (87.10%), Query Frame = 0
BLAST of Sed0027059 vs. NCBI nr
Match: XP_023542474.1 (mavicyanin-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 242.3 bits (617), Expect = 3.1e-60 Identity = 118/155 (76.13%), Postives = 132/155 (85.16%), Query Frame = 0
BLAST of Sed0027059 vs. NCBI nr
Match: XP_023000729.1 (mavicyanin-like [Cucurbita maxima]) HSP 1 Score: 237.3 bits (604), Expect = 9.8e-59 Identity = 118/162 (72.84%), Postives = 133/162 (82.10%), Query Frame = 0
BLAST of Sed0027059 vs. ExPASy Swiss-Prot
Match: Q9SK27 (Early nodulin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g25060 PE=2 SV=2) HSP 1 Score: 110.2 bits (274), Expect = 2.4e-23 Identity = 62/160 (38.75%), Postives = 94/160 (58.75%), Query Frame = 0
BLAST of Sed0027059 vs. ExPASy Swiss-Prot
Match: Q5JNJ5 (Early nodulin-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ENODL1 PE=1 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 2.5e-17 Identity = 55/148 (37.16%), Postives = 82/148 (55.41%), Query Frame = 0
BLAST of Sed0027059 vs. ExPASy Swiss-Prot
Match: Q9T076 (Early nodulin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g27520 PE=1 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 3.3e-17 Identity = 57/164 (34.76%), Postives = 83/164 (50.61%), Query Frame = 0
BLAST of Sed0027059 vs. ExPASy Swiss-Prot
Match: P80728 (Mavicyanin OS=Cucurbita pepo OX=3663 PE=1 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 1.4e-15 Identity = 42/104 (40.38%), Postives = 60/104 (57.69%), Query Frame = 0
BLAST of Sed0027059 vs. ExPASy Swiss-Prot
Match: Q8LC95 (Early nodulin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At5g25090 PE=2 SV=2) HSP 1 Score: 81.6 bits (200), Expect = 9.0e-15 Identity = 63/190 (33.16%), Postives = 100/190 (52.63%), Query Frame = 0
BLAST of Sed0027059 vs. ExPASy TrEMBL
Match: A0A6J1GVT8 (mavicyanin-like OS=Cucurbita moschata OX=3662 GN=LOC111457293 PE=4 SV=1) HSP 1 Score: 250.4 bits (638), Expect = 5.4e-63 Identity = 122/155 (78.71%), Postives = 135/155 (87.10%), Query Frame = 0
BLAST of Sed0027059 vs. ExPASy TrEMBL
Match: A0A6J1K239 (mavicyanin-like OS=Cucurbita maxima OX=3661 GN=LOC111489973 PE=4 SV=1) HSP 1 Score: 249.2 bits (635), Expect = 1.2e-62 Identity = 121/155 (78.06%), Postives = 135/155 (87.10%), Query Frame = 0
BLAST of Sed0027059 vs. ExPASy TrEMBL
Match: A0A6J1C6S8 (mavicyanin-like OS=Momordica charantia OX=3673 GN=LOC111008921 PE=4 SV=1) HSP 1 Score: 249.2 bits (635), Expect = 1.2e-62 Identity = 132/175 (75.43%), Postives = 145/175 (82.86%), Query Frame = 0
BLAST of Sed0027059 vs. ExPASy TrEMBL
Match: A0A6J1KKT0 (mavicyanin-like OS=Cucurbita maxima OX=3661 GN=LOC111495090 PE=4 SV=1) HSP 1 Score: 237.3 bits (604), Expect = 4.8e-59 Identity = 118/162 (72.84%), Postives = 133/162 (82.10%), Query Frame = 0
BLAST of Sed0027059 vs. ExPASy TrEMBL
Match: A0A6J1E841 (mavicyanin OS=Cucurbita moschata OX=3662 GN=LOC111431661 PE=4 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 9.0e-58 Identity = 115/162 (70.99%), Postives = 132/162 (81.48%), Query Frame = 0
BLAST of Sed0027059 vs. TAIR 10
Match: AT3G18590.1 (early nodulin-like protein 5 ) HSP 1 Score: 156.8 bits (395), Expect = 1.6e-38 Identity = 77/133 (57.89%), Postives = 98/133 (73.68%), Query Frame = 0
BLAST of Sed0027059 vs. TAIR 10
Match: AT1G48940.1 (early nodulin-like protein 6 ) HSP 1 Score: 154.8 bits (390), Expect = 6.0e-38 Identity = 76/140 (54.29%), Postives = 103/140 (73.57%), Query Frame = 0
BLAST of Sed0027059 vs. TAIR 10
Match: AT5G14345.1 (early nodulin-like protein 21 ) HSP 1 Score: 112.5 bits (280), Expect = 3.4e-25 Identity = 57/132 (43.18%), Postives = 80/132 (60.61%), Query Frame = 0
BLAST of Sed0027059 vs. TAIR 10
Match: AT2G25060.1 (early nodulin-like protein 14 ) HSP 1 Score: 110.2 bits (274), Expect = 1.7e-24 Identity = 62/160 (38.75%), Postives = 94/160 (58.75%), Query Frame = 0
BLAST of Sed0027059 vs. TAIR 10
Match: AT4G28365.1 (early nodulin-like protein 3 ) HSP 1 Score: 107.5 bits (267), Expect = 1.1e-23 Identity = 59/143 (41.26%), Postives = 88/143 (61.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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