Sed0027045 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGAGCAAACAGGTGGAACCAAGCCGATCACGAGCAGCGACCACCAGAAACGTCAAAATTATGGACGTGATGCAGCAGAATTCTCAACCAGCGAGCTTCCAGATCCTGAAGATGAAGATTCCCATATTTCCACAAGTAAAGAAACGGGAAGCTCCTGCAAAAAGAGAAGGATGTTAGACCTGGCAGAGAGCCTACAAATCTTGACAGAGTCGCTGTTGATGATGGAGCATGCGGAAATGGAGATTTTCAAGGAGAGGGAGGCCATCCGCCTCGAGGAGGAAAAGAGGAGGCTGGAATTTGAGGCTGAGATGACCCGGATGCTGCTTCAGAGTCAGCTGCAAATCGCCTCGTTTCTTACGGCCCGGCAGAGTCCCAACCGGAAGAGGAAGCGAGTTCAGGAAGATGATCGATCTTCTTCAGTTTCCTTACAAAGGTGGAAATGGAATACAATCATGAGCCTTCTTTAATTAATCTGCAAGATGTTAGAAACTGATGTATGATATTGTATATACAGGAATGGAGCTCTGCTGCTGAGTCTGATTCAACTCAACATGATCACGTTTTGA ATGGAAGAGCAAACAGGTGGAACCAAGCCGATCACGAGCAGCGACCACCAGAAACGTCAAAATTATGGACGTGATGCAGCAGAATTCTCAACCAGCGAGCTTCCAGATCCTGAAGATGAAGATTCCCATATTTCCACAAGTAAAGAAACGGGAAGCTCCTGCAAAAAGAGAAGGATGTTAGACCTGGCAGAGAGCCTACAAATCTTGACAGAGTCGCTGTTGATGATGGAGCATGCGGAAATGGAGATTTTCAAGGAGAGGGAGGCCATCCGCCTCGAGGAGGAAAAGAGGAGGCTGGAATTTGAGGCTGAGATGACCCGGATGCTGCTTCAGAGTCAGCTGCAAATCGCCTCGTTTCTTACGGCCCGGCAGAGTCCCAACCGGAAGAGGAAGCGAGTTCAGGAAGATGATCGATCTTCTTCAGTTTCCTTACAAAGGAATGGAGCTCTGCTGCTGAGTCTGATTCAACTCAACATGATCACGTTTTGA ATGGAAGAGCAAACAGGTGGAACCAAGCCGATCACGAGCAGCGACCACCAGAAACGTCAAAATTATGGACGTGATGCAGCAGAATTCTCAACCAGCGAGCTTCCAGATCCTGAAGATGAAGATTCCCATATTTCCACAAGTAAAGAAACGGGAAGCTCCTGCAAAAAGAGAAGGATGTTAGACCTGGCAGAGAGCCTACAAATCTTGACAGAGTCGCTGTTGATGATGGAGCATGCGGAAATGGAGATTTTCAAGGAGAGGGAGGCCATCCGCCTCGAGGAGGAAAAGAGGAGGCTGGAATTTGAGGCTGAGATGACCCGGATGCTGCTTCAGAGTCAGCTGCAAATCGCCTCGTTTCTTACGGCCCGGCAGAGTCCCAACCGGAAGAGGAAGCGAGTTCAGGAAGATGATCGATCTTCTTCAGTTTCCTTACAAAGGAATGGAGCTCTGCTGCTGAGTCTGATTCAACTCAACATGATCACGTTTTGA MEEQTGGTKPITSSDHQKRQNYGRDAAEFSTSELPDPEDEDSHISTSKETGSSCKKRRMLDLAESLQILTESLLMMEHAEMEIFKEREAIRLEEEKRRLEFEAEMTRMLLQSQLQIASFLTARQSPNRKRKRVQEDDRSSSVSLQRNGALLLSLIQLNMITF Homology
BLAST of Sed0027045 vs. NCBI nr
Match: XP_038882486.1 (uncharacterized protein LOC120073739 [Benincasa hispida]) HSP 1 Score: 203.0 bits (515), Expect = 2.0e-48 Identity = 128/171 (74.85%), Postives = 136/171 (79.53%), Query Frame = 0
BLAST of Sed0027045 vs. NCBI nr
Match: XP_004134781.1 (uncharacterized protein LOC101203124 [Cucumis sativus] >KGN49078.1 hypothetical protein Csa_004162 [Cucumis sativus]) HSP 1 Score: 189.5 bits (480), Expect = 2.3e-44 Identity = 119/170 (70.00%), Postives = 134/170 (78.82%), Query Frame = 0
BLAST of Sed0027045 vs. NCBI nr
Match: TYK13019.1 (uncharacterized protein E5676_scaffold255G006190 [Cucumis melo var. makuwa]) HSP 1 Score: 185.7 bits (470), Expect = 3.3e-43 Identity = 118/171 (69.01%), Postives = 133/171 (77.78%), Query Frame = 0
BLAST of Sed0027045 vs. NCBI nr
Match: XP_023544081.1 (uncharacterized protein LOC111803775 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 182.6 bits (462), Expect = 2.8e-42 Identity = 118/171 (69.01%), Postives = 133/171 (77.78%), Query Frame = 0
BLAST of Sed0027045 vs. NCBI nr
Match: XP_022977691.1 (uncharacterized protein LOC111477923 [Cucurbita maxima]) HSP 1 Score: 182.2 bits (461), Expect = 3.6e-42 Identity = 118/171 (69.01%), Postives = 133/171 (77.78%), Query Frame = 0
BLAST of Sed0027045 vs. ExPASy Swiss-Prot
Match: Q8L8L9 (Uncharacterized protein At4g22160 OS=Arabidopsis thaliana OX=3702 GN=At4g22160 PE=2 SV=2) HSP 1 Score: 65.1 bits (157), Expect = 8.4e-10 Identity = 49/126 (38.89%), Postives = 73/126 (57.94%), Query Frame = 0
BLAST of Sed0027045 vs. ExPASy TrEMBL
Match: A0A0A0KHR9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G512930 PE=4 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 1.1e-44 Identity = 119/170 (70.00%), Postives = 134/170 (78.82%), Query Frame = 0
BLAST of Sed0027045 vs. ExPASy TrEMBL
Match: A0A5D3CRX4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006190 PE=4 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 1.6e-43 Identity = 118/171 (69.01%), Postives = 133/171 (77.78%), Query Frame = 0
BLAST of Sed0027045 vs. ExPASy TrEMBL
Match: A0A6J1IKP0 (uncharacterized protein LOC111477923 OS=Cucurbita maxima OX=3661 GN=LOC111477923 PE=4 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 1.7e-42 Identity = 118/171 (69.01%), Postives = 133/171 (77.78%), Query Frame = 0
BLAST of Sed0027045 vs. ExPASy TrEMBL
Match: A0A6J1BUU1 (uncharacterized protein LOC111005561 OS=Momordica charantia OX=3673 GN=LOC111005561 PE=4 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.3e-42 Identity = 121/170 (71.18%), Postives = 132/170 (77.65%), Query Frame = 0
BLAST of Sed0027045 vs. ExPASy TrEMBL
Match: A0A1S3AZS4 (uncharacterized protein LOC103484640 OS=Cucumis melo OX=3656 GN=LOC103484640 PE=4 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.3e-42 Identity = 116/171 (67.84%), Postives = 131/171 (76.61%), Query Frame = 0
BLAST of Sed0027045 vs. TAIR 10
Match: AT4G22160.2 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 65.1 bits (157), Expect = 6.0e-11 Identity = 49/126 (38.89%), Postives = 73/126 (57.94%), Query Frame = 0
BLAST of Sed0027045 vs. TAIR 10
Match: AT4G22160.1 (unknown protein; Has 42 Blast hits to 42 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 58.5 bits (140), Expect = 5.6e-09 Identity = 42/107 (39.25%), Postives = 63/107 (58.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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