Sed0027016 (gene) Chayote v1

Overview


Name	Sed0027016
Type	gene
Organism	Sechium edule (Chayote v1)
Description	binding partner of ACD11 1-like
Location	LG05: 44973142 .. 44976791 (+)
RNA-Seq Expression	Sed0027016
Synteny	Sed0027016

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAAATTGTAGCTGCACAGTGGAAGGAATAGAGTTAGAACCATACCTTCAAACCGTCGGAACAATCGGAGGATGCTAACCGCCGGAGAGGATTCCGGTGGACCGGTTGCCGACAGGGGAGCTGCCGGCGAGATAAGCCTCTACGGACTGAGTTAGGGCTGCTGTCCACGCCCTAGTGAAACTGATGACGATCGTTTAACGGGGAGCAATTTTCCATGCTTTTCAATGAGAGGAATTTCACAATAATTTTTCTTTTTTTGAAAATTTGTTTGTGGGAATTTATATTTTAATTACAACCATTTTTTAAAAATATTTTTTATTCATACTTTATAGTAAAATATTTATTCTTTTCGATCCATTTTTATTTACCATTTCATTGAGTATAGTTTGATTGAAGGTATCAATTTTATTGGATTGAAAGTCTCATGAATTTTACTTATTTAAGATCATTAATTTGACAATAAAAAAACCAAAATGTGTTTTATGATTTTTTTTTTTGAGTACATATTGGAGGAGGGGGAGCAAATACGAATGTTAAGGATAGAACTTGTGATGTTGGTGTTTAACTGGTTTATAACCAAATGATGAAACAATTGCGCCACTAACATCTTCGGCTTTTAGGTACGATTCTCTATCCTTCTTTTAATTATAGTTCTACTAAACAAATAAAAAAGAAGTTTTGAAGGAGGTTTTCTCCGCTCAAAGTTTGAAACTCACTTGTGATATTGTTTCTAAAAAATAAAAAATAATACTCAATTGTAAAAAAAAAGAAAACCGGTTTCACTTATTCAAATTATCATGAACAGATTCTACCTCTTGTATTATATTTGTAGTAGATTTTTAAAAATAATTCATGTATAGCATATTTATTTATATCACTTAACTAGTCATAGAACTCAATTTAGATTTCTATCACGGATAGAAAACTCAAGCAGGAATAGAATAAGTTTATCATTAATTGAATTATATCACTAATAAAACTCAACCAGCGATAAAAGTCAATTTAAATTTTCTGCTACAAATGAATGATTTTTTATTTTGTATTATAGATAGAAATATTTTTACATTCTTTTTGTTATACATGCAAAATCCTCCTATCAATTTTGTTTTGTTATATTTGATTTCTTATAAAAAAAAAAAATTTTGACGTCTATTAAAAAGTATACGTATTATTATTCATGAAGACTCCTTTTTTATTTTAACAAAGAAATTAATATATATTGAAAAAGGAAAATAAATGGAAAAACAAAAATGAGAATTCAGTTTTGTTTGTTTGTTTTGGCATATGTATTATTGACGAAGCTAAACAACCGCCAAGCCACAACAAACCTCATTTCTTCCTCTAAACAATTTGGATTCCAAACCTCTCTGTCGTATCGGACGCAAATTCATGGCGGTTTGTATTCAATTTTTCTTTCATTTTTACTTTTTTTTCTCTAATCTCTTTGATTTCTTACGATGTTCTTCATTCTCCTTCTAATCAATTACTTAATATACACTTGCAACGCGAAATTCAGCTTTGATTTTTCATAATCTGTCTTGATCGTCGCTTTGATTTGTTGATGCGGATGCAGATGAGAACCGTGTGCGTTACCAATCTCTCGCTGAGCGCGGCGGAGAAAGATTTGATAGAGTTCTTTTCTTTTTCTGGTGAAATCGAATTCGTCGAGATGCGAAAGTAAGCATCATAGACCCTGTTTGATATCTGTTTCGTTTTTTGTATCTGATTCCCAATTTTTTATTTTTTGTTTTTAGCTTTTTATTTTAAAAAATAAAAATCGTTTGATAACTGATTTTAATTTAGTGTTTTTAAAAATTTAAAACTAAAAAACGTGTTTGATAACTATTTTTTATTTCCAAATATCATATTTTGTTTTGAGTTTTTTTTCTATTTATTCTTGATTTTTTCATTCTTTAAAAAAAAAAAAAAAAAAAACTTATTTTTAAATGCTACATTTTTTTTTACTTAATTTCTTTAATATTTTTAAAACGTTTTTAAAATTTAAAAACAACCACCAAAATTGGTTATCAAACAAACCTATTTTTAAAATATTAAAAACAAAAAACGAAATTGTTATCCTATAATTGACATTTTTTTTTTGTTCATATGCATTTTCATGTGAAATTGAATTTGTCGAAATGCGAAAGTAAGCATCATAATTGGTACTTTTCTTAATGTTTGTTTGTTCATATGCTTTTTCATGTAGTTTATTTTGTTTTTGTTTTTGTTTTGTTTGTAGGGATAATGAGCGATCTCAAATTGCATTCGTTACCTTTAAGGATTCGAAAGGGGCAGAGACCTCGATTCTACTCTCGGTTTGATTCAAATTCCTATTCTTCTCTTTGTTTGTTCTTCTTCATTTGCAGATCTGTTGGATGATTTTGTTTGAATATGAATGAGCAAATTCTCTTCCATTATAACAAATGGCTTTAACTGTGTGTTTATTTGTTCTCATAATTACTTGTGACGATGTTTCTTTCTTCAAAAAGTAGAAGAAATTAACAAATTTTTTGTTGAGATATGCCTCGAACGCATTTCACATGCGTGAATGCATCTGTATTCGCTTAGCGCATCATGCGTGCAAACGCATCTCGCATTGCTGCAATACGTTTCGCATCCACTTTCTGTTTAATGCTTACGCATTCTGTAATAGGATTTGATGAGAGTACATACATAAACTCGAATTAAATCCTAGTCGTATTATGACGTTTATTATGTAACTTTGTACTTAGCCTCTCCTTAATACAATTATTCTCCCTCTCTCCATGGGCAAGCTAACACTACGTTAGTGAACCACGTGAATTCGTGTGTGTTCTTATCTTCTTCTTCTTTTGCGTTTATCGTTATCTATTTCATATCTTTGTATCGATTGTTGATTGCCGTTTTCATAACCGTTTTTATTCGTTTATTTCTTTAAGATAGAATATATCGATCAATAGTGTTGTTACGTTGTGCTGCAGGTTTTTTCTTTGCTTCAGCTGTTACTTATTTGATTAAAATGTCTTACGTTTCTCAGGGAGCTACAATTGTGGATCAACCTGTTACCATTGTTGCCGCTCCGGATTACAATCCTACTGCTGTTTCTGTTAGTGCCTCGCTACGATCGTCTACTCCGATGTTTTCGTCAATCCTACTTTTACTGTAATTTTCAATCTTGTCACTGAAATTTCTTACATGGATGAATAACACACATGTTTCTCCAGAATACAGAGAACACGGGGTCCGAAACCGCTGGATCTACAATGCAGAAGGCAGAGGATGTTGTAAGCAGCATGTTGGCCAAAGGCTTCACTCTGGGCAATAATGCTCTCAATAAAGCAAAGTCTTTTGATGAGAGGCACCAGTTGACATCGACAGCCTCATCGAAAGTCGCTTCTCTGGACCAGAAGATCGGCCTTAGCGAGAAGATTAGTGTCGGCACGACCGTGGTGAATGAGAAAGTGAAAGAAATGGATGAGAAGTTTCAAGTGTCTGAGAAGACCAAGGCTGCAGGATCAGCTATAATGGCTAACCGCTACGTCTCGACCGGGGCTTCCTGGGTTAGCCAGACGTTTCAAAGAGTCGCCAAAGCAGCGGTAGATGTTAGCCAGAAAACGAAGGAGAAGGTTTTAGCTGAGGATCAAGGGAAACATGTAGGAAGTTCTTAA

mRNA sequence

ATGATAAATTGTAGCTGCACAGTGGAAGGAATAGAGTTAGAACCATACCTTCAAACCATGAGAACCGTGTGCGTTACCAATCTCTCGCTGAGCGCGGCGGAGAAAGATTTGATAGAGTTCTTTTCTTTTTCTGGTGAAATCGAATTCGTCGAGATGCGAAAGGATAATGAGCGATCTCAAATTGCATTCGTTACCTTTAAGGATTCGAAAGGGGCAGAGACCTCGATTCTACTCTCGGGAGCTACAATTGTGGATCAACCTGTTACCATTGTTGCCGCTCCGGATTACAATCCTACTGCTGTTTCTAATACAGAGAACACGGGGTCCGAAACCGCTGGATCTACAATGCAGAAGGCAGAGGATGTTGTAAGCAGCATGTTGGCCAAAGGCTTCACTCTGGGCAATAATGCTCTCAATAAAGCAAAGTCTTTTGATGAGAGGCACCAGTTGACATCGACAGCCTCATCGAAAGTCGCTTCTCTGGACCAGAAGATCGGCCTTAGCGAGAAGATTAGTGTCGGCACGACCGTGGTGAATGAGAAAGTGAAAGAAATGGATGAGAAGTTTCAAGTGTCTGAGAAGACCAAGGCTGCAGGATCAGCTATAATGGCTAACCGCTACGTCTCGACCGGGGCTTCCTGGGTTAGCCAGACGTTTCAAAGAGTCGCCAAAGCAGCGGTAGATGTTAGCCAGAAAACGAAGGAGAAGGTTTTAGCTGAGGATCAAGGGAAACATGTAGGAAGTTCTTAA

Coding sequence (CDS)

ATGATAAATTGTAGCTGCACAGTGGAAGGAATAGAGTTAGAACCATACCTTCAAACCATGAGAACCGTGTGCGTTACCAATCTCTCGCTGAGCGCGGCGGAGAAAGATTTGATAGAGTTCTTTTCTTTTTCTGGTGAAATCGAATTCGTCGAGATGCGAAAGGATAATGAGCGATCTCAAATTGCATTCGTTACCTTTAAGGATTCGAAAGGGGCAGAGACCTCGATTCTACTCTCGGGAGCTACAATTGTGGATCAACCTGTTACCATTGTTGCCGCTCCGGATTACAATCCTACTGCTGTTTCTAATACAGAGAACACGGGGTCCGAAACCGCTGGATCTACAATGCAGAAGGCAGAGGATGTTGTAAGCAGCATGTTGGCCAAAGGCTTCACTCTGGGCAATAATGCTCTCAATAAAGCAAAGTCTTTTGATGAGAGGCACCAGTTGACATCGACAGCCTCATCGAAAGTCGCTTCTCTGGACCAGAAGATCGGCCTTAGCGAGAAGATTAGTGTCGGCACGACCGTGGTGAATGAGAAAGTGAAAGAAATGGATGAGAAGTTTCAAGTGTCTGAGAAGACCAAGGCTGCAGGATCAGCTATAATGGCTAACCGCTACGTCTCGACCGGGGCTTCCTGGGTTAGCCAGACGTTTCAAAGAGTCGCCAAAGCAGCGGTAGATGTTAGCCAGAAAACGAAGGAGAAGGTTTTAGCTGAGGATCAAGGGAAACATGTAGGAAGTTCTTAA

Protein sequence

MINCSCTVEGIELEPYLQTMRTVCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLSGATIVDQPVTIVAAPDYNPTAVSNTENTGSETAGSTMQKAEDVVSSMLAKGFTLGNNALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAGSAIMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEDQGKHVGSS

Homology

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BLAST of Sed0027016 vs. NCBI nr
Match: XP_038900618.1 (binding partner of ACD11 1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 353.2 bits (905), Expect = 1.8e-93
Identity = 201/248 (81.05%), Postives = 213/248 (85.89%), Query Frame = 0


Query: 20  MRTVCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLS 79
           MRTV VTN+SLS  EKDL +FFSFSGEIEFVEMRKD ERSQ+AFVTFKD KGAETSILLS
Sbjct: 1   MRTVRVTNVSLSVTEKDLRDFFSFSGEIEFVEMRKDTERSQLAFVTFKDPKGAETSILLS 60

Query: 80  GATIVDQPVTIVAAPDYNPTAV--------------SNTENTGSETAGSTMQKAEDVVSS 139
           GATIVDQPV+I +APDYN  AV              ++  N+G+ TAGS MQKAEDVVSS
Sbjct: 61  GATIVDQPVSIASAPDYNLPAVNASAPVAMPVSTPATDNTNSGTSTAGSAMQKAEDVVSS 120

Query: 140 MLAKGFTLGNNALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVKEM 199
           MLAKGFTLG +ALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKV+EM
Sbjct: 121 MLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREM 180

Query: 200 DEKFQVSEKTKA----AGSAIMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLAED 250
           DEKFQVSEKTKA    AGSAIM NRYV TGASWVSQTFQRVAKAAVDVSQKTKEKVL ED
Sbjct: 181 DEKFQVSEKTKAAVSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLVED 240

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BLAST of Sed0027016 vs. NCBI nr
Match: XP_038900617.1 (binding partner of ACD11 1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 353.2 bits (905), Expect = 1.8e-93
Identity = 201/248 (81.05%), Postives = 213/248 (85.89%), Query Frame = 0


Query: 20  MRTVCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLS 79
           MRTV VTN+SLS  EKDL +FFSFSGEIEFVEMRKD ERSQ+AFVTFKD KGAETSILLS
Sbjct: 3   MRTVRVTNVSLSVTEKDLRDFFSFSGEIEFVEMRKDTERSQLAFVTFKDPKGAETSILLS 62

Query: 80  GATIVDQPVTIVAAPDYNPTAV--------------SNTENTGSETAGSTMQKAEDVVSS 139
           GATIVDQPV+I +APDYN  AV              ++  N+G+ TAGS MQKAEDVVSS
Sbjct: 63  GATIVDQPVSIASAPDYNLPAVNASAPVAMPVSTPATDNTNSGTSTAGSAMQKAEDVVSS 122

Query: 140 MLAKGFTLGNNALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVKEM 199
           MLAKGFTLG +ALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKV+EM
Sbjct: 123 MLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREM 182

Query: 200 DEKFQVSEKTKA----AGSAIMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLAED 250
           DEKFQVSEKTKA    AGSAIM NRYV TGASWVSQTFQRVAKAAVDVSQKTKEKVL ED
Sbjct: 183 DEKFQVSEKTKAAVSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLVED 242

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BLAST of Sed0027016 vs. NCBI nr
Match: XP_004148092.1 (binding partner of ACD11 1 [Cucumis sativus] >KGN63397.1 hypothetical protein Csa_022121 [Cucumis sativus])

HSP 1 Score: 351.3 bits (900), Expect = 6.9e-93
Identity = 205/249 (82.33%), Postives = 215/249 (86.35%), Query Frame = 0


Query: 21  RTVCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLSG 80
           RTV VTN+SLSA EKDL +FFSFSGEIEFVEMR DNERSQ+AFVTFKDSKGAETSILLSG
Sbjct: 4   RTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDSKGAETSILLSG 63

Query: 81  ATIVDQPVTIVAAPDYN--------PTAV-------SNTENTGSETAGSTMQKAEDVVSS 140
           ATIVDQPV+I +APDYN        P AV        NT +T + TAGS MQKAEDVVSS
Sbjct: 64  ATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPALDNTTSTTNSTAGSAMQKAEDVVSS 123

Query: 141 MLAKGFTLGNNALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVKEM 200
           MLAKGFTLG +ALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKV+EM
Sbjct: 124 MLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREM 183

Query: 201 DEKFQVSEKTKA----AGSAIMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLA-E 250
           DEKFQVSEKTKA    AGSAIM NRYV TGASWVSQTFQRVAKAAVDVSQKTKEKVLA E
Sbjct: 184 DEKFQVSEKTKAAVSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEE 243

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BLAST of Sed0027016 vs. NCBI nr
Match: XP_023007523.1 (binding partner of ACD11 1-like [Cucurbita maxima])

HSP 1 Score: 345.1 bits (884), Expect = 5.0e-91
Identity = 195/244 (79.92%), Postives = 210/244 (86.07%), Query Frame = 0


Query: 20  MRTVCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLS 79
           +RTV VTN+SLSA+EKDL +FFSFSGEIEFVEMRKDNERSQIAFVTFKD KGAETSILLS
Sbjct: 5   VRTVRVTNVSLSASEKDLRDFFSFSGEIEFVEMRKDNERSQIAFVTFKDQKGAETSILLS 64

Query: 80  GATIVDQPVTIVAAPDYN----------PTAVSNTENTGSETAGSTMQKAEDVVSSMLAK 139
           GATIVDQPV+I  APDYN          P +  + EN GS TAGS MQKAEDVVSSMLAK
Sbjct: 65  GATIVDQPVSIATAPDYNLPAVPASAPLPVSSPSAENAGSGTAGSAMQKAEDVVSSMLAK 124

Query: 140 GFTLGNNALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVKEMDEKF 199
           GFTLG + LN+AKSFD++HQLTSTASSKV SLDQKIGLSEKISVGTTVVNEKVKEMDEKF
Sbjct: 125 GFTLGKDTLNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKF 184

Query: 200 QVSEKTKA----AGSAIMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEDQGKH 250
           QVSEKTKA    AG+A+MANRYVSTGASWV+QTFQRVAKAAV+VS KTKEKVLAEDQ K 
Sbjct: 185 QVSEKTKAAVNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQ 244

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BLAST of Sed0027016 vs. NCBI nr
Match: XP_023533747.1 (binding partner of ACD11 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 344.7 bits (883), Expect = 6.5e-91
Identity = 195/244 (79.92%), Postives = 212/244 (86.89%), Query Frame = 0


Query: 20  MRTVCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLS 79
           +RTV VTN+SLSA+EKDL +FFSFSGEIEFVEMRKDNERSQIAFVTFKD KGAETSILLS
Sbjct: 5   VRTVRVTNVSLSASEKDLRDFFSFSGEIEFVEMRKDNERSQIAFVTFKDPKGAETSILLS 64

Query: 80  GATIVDQPVTIVAAPDYN----------PTAVSNTENTGSETAGSTMQKAEDVVSSMLAK 139
           GATIVDQPV+I +APDY+          P +  + EN GS TAGS MQKAEDVVSSMLAK
Sbjct: 65  GATIVDQPVSIASAPDYSLPAVPASAPLPVSSPSAENAGSGTAGSAMQKAEDVVSSMLAK 124

Query: 140 GFTLGNNALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVKEMDEKF 199
           GFTLG +ALN+AKSFD++HQLTSTASSKV SLDQKIGLSEKISVGTTVVNEKVKEMDEKF
Sbjct: 125 GFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKF 184

Query: 200 QVSEKTKA----AGSAIMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEDQGKH 250
           QVSEKTKA    AG+A+MANRYVSTGASWV+QTFQRVAKAAV+VS KTKEKVLAEDQ K 
Sbjct: 185 QVSEKTKAAVNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQ 244

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BLAST of Sed0027016 vs. ExPASy Swiss-Prot
Match: Q9LFD5 (Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.2e-58
Identity = 134/232 (57.76%), Postives = 174/232 (75.00%), Query Frame = 0


Query: 20  MRTVCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLS 79
           +R+V V NLS  A E D+ EFFSFSGE+E +++ + NE S  A+VTFK+++GAET++LLS
Sbjct: 5   VRSVKVGNLSSGATEHDIKEFFSFSGEVESIDI-QSNEHS--AYVTFKETQGAETAVLLS 64

Query: 80  GATIVDQPVTIVAAPDYNPTAVSNTENTGSETAGSTMQKAEDVVSSMLAKGFTLGNNALN 139
           GA+I DQ V I  AP+Y+P A  + E T S  A S +QKAEDVVSSMLAKGF LG +A+ 
Sbjct: 65  GASIADQSVIIELAPNYSPPAAPHAE-TQSSGAESVVQKAEDVVSSMLAKGFILGKDAVG 124

Query: 140 KAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTK--- 199
           KAK+FDE+H  TSTA++ VASLDQKIGLS+K++ GT++VNEK+K +D+ FQV+E+TK   
Sbjct: 125 KAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIKAVDQNFQVTERTKSVY 184

Query: 200 --------AAGSAIMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLAE 241
                   +AGSA+M NRYV TG SW +  F RVA+AA +V QKTKEKV AE
Sbjct: 185 AAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQAAGEVGQKTKEKVEAE 232

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BLAST of Sed0027016 vs. ExPASy Swiss-Prot
Match: P87216 (Protein vip1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=vip1 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.3e-06
Identity = 53/208 (25.48%), Postives = 94/208 (45.19%), Query Frame = 0


Query: 23  VCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLSGAT 82
           V VTN+S    EK + +FFSF G++  +   K  E +Q A + F+     +T++LL  A 
Sbjct: 5   VIVTNISPEVTEKQISDFFSFCGKVSNISTEKSGE-TQTAKIQFERPSATKTALLLQDAL 64

Query: 83  IVDQPVTIVAAPDYNPTAVSNTENTGSETAGSTMQKAED-VVSSMLAKGFTLGNNALNKA 142
           +    + I  + D    + ++    G + A     K    ++S +L++G+ L +  L K+
Sbjct: 65  LGQNKIQI-TSEDGGAASTTDQGGAGGDQAARQEDKPRSAIISELLSRGYHLSDVTLEKS 124

Query: 143 KSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTV-VNEKVKEMDEKFQVSEKTKAAGS 202
              D+ + ++S     + S      LS   SV     V EK  E+D KF +S+K     S
Sbjct: 125 IQLDQSYGVSSKFKGILES-----ALSGVRSVNERYHVTEKANEVDNKFAISDKLNRTSS 184

Query: 203 AIMANRYVSTGASWVSQTFQRVAKAAVD 229
            +    + +   +  +   Q+V  A  D
Sbjct: 185 LVSTYFHKALETAAGTSAGQKVQNAYED 205

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BLAST of Sed0027016 vs. ExPASy TrEMBL
Match: A0A0A0LRG1 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G437070 PE=4 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 3.3e-93
Identity = 205/249 (82.33%), Postives = 215/249 (86.35%), Query Frame = 0


Query: 21  RTVCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLSG 80
           RTV VTN+SLSA EKDL +FFSFSGEIEFVEMR DNERSQ+AFVTFKDSKGAETSILLSG
Sbjct: 4   RTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDSKGAETSILLSG 63

Query: 81  ATIVDQPVTIVAAPDYN--------PTAV-------SNTENTGSETAGSTMQKAEDVVSS 140
           ATIVDQPV+I +APDYN        P AV        NT +T + TAGS MQKAEDVVSS
Sbjct: 64  ATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPALDNTTSTTNSTAGSAMQKAEDVVSS 123

Query: 141 MLAKGFTLGNNALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVKEM 200
           MLAKGFTLG +ALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKV+EM
Sbjct: 124 MLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREM 183

Query: 201 DEKFQVSEKTKA----AGSAIMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLA-E 250
           DEKFQVSEKTKA    AGSAIM NRYV TGASWVSQTFQRVAKAAVDVSQKTKEKVLA E
Sbjct: 184 DEKFQVSEKTKAAVSNAGSAIMTNRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEE 243

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BLAST of Sed0027016 vs. ExPASy TrEMBL
Match: A0A6J1L7W4 (binding partner of ACD11 1-like OS=Cucurbita maxima OX=3661 GN=LOC111499987 PE=4 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 2.4e-91
Identity = 195/244 (79.92%), Postives = 210/244 (86.07%), Query Frame = 0


Query: 20  MRTVCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLS 79
           +RTV VTN+SLSA+EKDL +FFSFSGEIEFVEMRKDNERSQIAFVTFKD KGAETSILLS
Sbjct: 5   VRTVRVTNVSLSASEKDLRDFFSFSGEIEFVEMRKDNERSQIAFVTFKDQKGAETSILLS 64

Query: 80  GATIVDQPVTIVAAPDYN----------PTAVSNTENTGSETAGSTMQKAEDVVSSMLAK 139
           GATIVDQPV+I  APDYN          P +  + EN GS TAGS MQKAEDVVSSMLAK
Sbjct: 65  GATIVDQPVSIATAPDYNLPAVPASAPLPVSSPSAENAGSGTAGSAMQKAEDVVSSMLAK 124

Query: 140 GFTLGNNALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVKEMDEKF 199
           GFTLG + LN+AKSFD++HQLTSTASSKV SLDQKIGLSEKISVGTTVVNEKVKEMDEKF
Sbjct: 125 GFTLGKDTLNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKF 184

Query: 200 QVSEKTKA----AGSAIMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEDQGKH 250
           QVSEKTKA    AG+A+MANRYVSTGASWV+QTFQRVAKAAV+VS KTKEKVLAEDQ K 
Sbjct: 185 QVSEKTKAAVNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQ 244

[Close]

BLAST of Sed0027016 vs. ExPASy TrEMBL
Match: A0A5A7TN24 (Binding partner of ACD11 1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold66G00080 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 9.1e-91
Identity = 200/249 (80.32%), Postives = 213/249 (85.54%), Query Frame = 0


Query: 21  RTVCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLSG 80
           RTV VTN+SLSA EKDL +FFSFSGEIEFVEMR DNERSQ+AFVTFKD KGAETSILLSG
Sbjct: 4   RTVRVTNVSLSATEKDLRDFFSFSGEIEFVEMRNDNERSQLAFVTFKDPKGAETSILLSG 63

Query: 81  ATIVDQPVTIVAAPDYN---------------PTAVSNTENTGSETAGSTMQKAEDVVSS 140
           ATIVDQPV+I +APDYN                 A+ NT +T + TAGS +QK EDVVSS
Sbjct: 64  ATIVDQPVSISSAPDYNLPAVDASAPVAVPVSTPAIDNTTST-TTTAGSAIQKTEDVVSS 123

Query: 141 MLAKGFTLGNNALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVKEM 200
           MLAKGFTLG +ALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKV+EM
Sbjct: 124 MLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVREM 183

Query: 201 DEKFQVSEKTKA----AGSAIMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLA-E 250
           DEKFQVSEKTKA    AGSA+MANRYV TGASWVSQTFQRVAKAAVDVSQKTKEKVLA E
Sbjct: 184 DEKFQVSEKTKAAVSNAGSALMANRYVLTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEE 243

[Close]

BLAST of Sed0027016 vs. ExPASy TrEMBL
Match: A0A6J1G681 (binding partner of ACD11 1-like OS=Cucurbita moschata OX=3662 GN=LOC111451146 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 5.9e-90
Identity = 193/244 (79.10%), Postives = 210/244 (86.07%), Query Frame = 0


Query: 20  MRTVCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLS 79
           +RTV VTN+SLSA+EKDL +FFSFSGEIE VEMRKDNERSQIAFVTFKD KGAETSILLS
Sbjct: 5   VRTVRVTNVSLSASEKDLRDFFSFSGEIEIVEMRKDNERSQIAFVTFKDPKGAETSILLS 64

Query: 80  GATIVDQPVTIVAAPDYN----------PTAVSNTENTGSETAGSTMQKAEDVVSSMLAK 139
           GATIVDQPV+I +APDY+          P +  + EN GS TAGS M KAEDVVSSMLAK
Sbjct: 65  GATIVDQPVSIASAPDYSLPAVPASAPLPVSSPSAENAGSGTAGSAMNKAEDVVSSMLAK 124

Query: 140 GFTLGNNALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVKEMDEKF 199
           GFTLG +ALN+AKSFD++HQLTSTASSKV SLDQKIGLSEKISVGTTVVNEKVKEMDEKF
Sbjct: 125 GFTLGKDALNRAKSFDQKHQLTSTASSKVLSLDQKIGLSEKISVGTTVVNEKVKEMDEKF 184

Query: 200 QVSEKTKA----AGSAIMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEDQGKH 250
           QVSEKTKA    AG+A+MANRYVSTGASWV+QTFQRVAKAAV+VS KTKEKVLAEDQ K 
Sbjct: 185 QVSEKTKAAVNNAGTALMANRYVSTGASWVTQTFQRVAKAAVEVSHKTKEKVLAEDQAKQ 244

[Close]

BLAST of Sed0027016 vs. ExPASy TrEMBL
Match: A0A6J1JGG3 (binding partner of ACD11 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484286 PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 3.8e-89
Identity = 198/250 (79.20%), Postives = 212/250 (84.80%), Query Frame = 0


Query: 20  MRTVCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLS 79
           MRTV VTN+SL A EK+L EFFSFSGEIEFVEMRKDNE+ Q+AFVTFKD KGAETSILLS
Sbjct: 3   MRTVRVTNVSLGATEKNLREFFSFSGEIEFVEMRKDNEQFQVAFVTFKDPKGAETSILLS 62

Query: 80  GATIVDQPVTIVAAPDYNPTAVSNT----------ENTGSETA---------GSTMQKAE 139
           GATIVDQP++IV+APDYN  AV+ +          ENTG+ETA         GS MQKAE
Sbjct: 63  GATIVDQPISIVSAPDYNLPAVAASDPPAASAPAAENTGAETAETAGTTGTTGSAMQKAE 122

Query: 140 DVVSSMLAKGFTLGNNALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNE 199
           DVVSSMLAKGF LG +ALN+AKSFDERHQLT TASSKVASLDQKIGLSEKISVGTTVVNE
Sbjct: 123 DVVSSMLAKGFILGKDALNRAKSFDERHQLTWTASSKVASLDQKIGLSEKISVGTTVVNE 182

Query: 200 KVKEMDEKFQVSEKTKA----AGSAIMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEK 246
           KV+EMDEKFQVSEKTKA    AGSAIM NRYVSTGASWVSQTFQRVAKAAVDVSQKTKEK
Sbjct: 183 KVREMDEKFQVSEKTKAAVNNAGSAIMTNRYVSTGASWVSQTFQRVAKAAVDVSQKTKEK 242

[Close]

BLAST of Sed0027016 vs. TAIR 10
Match: AT4G17720.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 241.9 bits (616), Expect = 5.5e-64
Identity = 140/244 (57.38%), Postives = 184/244 (75.41%), Query Frame = 0


Query: 19  TMRTVCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILL 78
           TM TV V+N+SL A ++DL EFFSFSG+I ++E + + ER+++A+VTFKD +GAET++LL
Sbjct: 2   TMTTVKVSNVSLGATDRDLKEFFSFSGDILYLETQSETERTKLAYVTFKDLQGAETAVLL 61

Query: 79  SGATIVDQPVTIVAAPDY--NPTAVSNTE----NTGSETAGSTMQKAEDVVSSMLAKGFT 138
           SGATIVD  V +  APDY  +P A+++ E    N   +   S ++KAEDVVSSMLAKGF 
Sbjct: 62  SGATIVDSSVIVSMAPDYQLSPEALASLEPKDSNKSPKAGDSVLRKAEDVVSSMLAKGFI 121

Query: 139 LGNNALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVS 198
           LG +A+ KAKS DE+HQLTSTAS+KVAS D+KIG ++KI+ GT VV EKV+E+D+K+QVS
Sbjct: 122 LGKDAIAKAKSVDEKHQLTSTASAKVASFDKKIGFTDKINTGTVVVGEKVREVDQKYQVS 181

Query: 199 EKTKA-----------AGSAIMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKV-LAE 245
           EKTK+           AGSAIM NRYV TGA+WV+  F +VAKAA +V QK KEKV +AE
Sbjct: 182 EKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNKVAKAAEEVGQKAKEKVGMAE 241

[Close]

BLAST of Sed0027016 vs. TAIR 10
Match: AT5G46870.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 233.4 bits (594), Expect = 2.0e-61
Identity = 135/246 (54.88%), Postives = 182/246 (73.98%), Query Frame = 0


Query: 19  TMRTVCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILL 78
           +M TV V+N+SL A E+DL EFFSFSG+I ++E + +N+ S++A+VTFKD +GAET++LL
Sbjct: 2   SMVTVKVSNVSLEATERDLKEFFSFSGDIAYLETQSENDGSKLAYVTFKDLQGAETAVLL 61

Query: 79  SGATIVDQPVTIVAAPDYN--PTAV--------SNTENTGSETAGSTMQKAEDVVSSMLA 138
           +G+TIVD  VT+  +PDY   P A+        SN  ++ +    S  +KAEDVVS M++
Sbjct: 62  TGSTIVDSSVTVTMSPDYQLPPDALASIESLKESNKSSSPTREDVSVFRKAEDVVSGMIS 121

Query: 139 KGFTLGNNALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVKEMDEK 198
           KGF LG +A+ KAKS DE+HQLTSTAS++V S D++IG +EKI+ GTTVV+EKVKE+D+K
Sbjct: 122 KGFVLGKDAIAKAKSLDEKHQLTSTASARVTSFDKRIGFTEKINTGTTVVSEKVKEVDQK 181

Query: 199 FQVSEKTKA-----------AGSAIMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKV 243
           FQV+EKTK+           AGSAIM NRYV TGA+WV+  F RV+KAA +V QK KEKV
Sbjct: 182 FQVTEKTKSAIAAAEQTVSNAGSAIMKNRYVLTGATWVTGAFNRVSKAAEEVGQKAKEKV 241

[Close]

BLAST of Sed0027016 vs. TAIR 10
Match: AT5G16840.2 (binding partner of acd11 1 )

HSP 1 Score: 232.6 bits (592), Expect = 3.3e-61
Identity = 134/232 (57.76%), Postives = 174/232 (75.00%), Query Frame = 0


Query: 20  MRTVCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLS 79
           +R+V V NLS  A E D+ EFFSFSGE+E ++++  NE S  A+VTFK+++GAET++LLS
Sbjct: 5   VRSVKVGNLSSGATEHDIKEFFSFSGEVESIDIQSSNEHS--AYVTFKETQGAETAVLLS 64

Query: 80  GATIVDQPVTIVAAPDYNPTAVSNTENTGSETAGSTMQKAEDVVSSMLAKGFTLGNNALN 139
           GA+I DQ V I  AP+Y+P A  + E T S  A S +QKAEDVVSSMLAKGF LG +A+ 
Sbjct: 65  GASIADQSVIIELAPNYSPPAAPHAE-TQSSGAESVVQKAEDVVSSMLAKGFILGKDAVG 124

Query: 140 KAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTK--- 199
           KAK+FDE+H  TSTA++ VASLDQKIGLS+K++ GT++VNEK+K +D+ FQV+E+TK   
Sbjct: 125 KAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIKAVDQNFQVTERTKSVY 184

Query: 200 --------AAGSAIMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLAE 241
                   +AGSA+M NRYV TG SW +  F RVA+AA +V QKTKEKV AE
Sbjct: 185 AAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQAAGEVGQKTKEKVEAE 233

[Close]

BLAST of Sed0027016 vs. TAIR 10
Match: AT5G16840.1 (binding partner of acd11 1 )

HSP 1 Score: 228.0 bits (580), Expect = 8.2e-60
Identity = 134/232 (57.76%), Postives = 174/232 (75.00%), Query Frame = 0


Query: 20  MRTVCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLS 79
           +R+V V NLS  A E D+ EFFSFSGE+E +++ + NE S  A+VTFK+++GAET++LLS
Sbjct: 5   VRSVKVGNLSSGATEHDIKEFFSFSGEVESIDI-QSNEHS--AYVTFKETQGAETAVLLS 64

Query: 80  GATIVDQPVTIVAAPDYNPTAVSNTENTGSETAGSTMQKAEDVVSSMLAKGFTLGNNALN 139
           GA+I DQ V I  AP+Y+P A  + E T S  A S +QKAEDVVSSMLAKGF LG +A+ 
Sbjct: 65  GASIADQSVIIELAPNYSPPAAPHAE-TQSSGAESVVQKAEDVVSSMLAKGFILGKDAVG 124

Query: 140 KAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTK--- 199
           KAK+FDE+H  TSTA++ VASLDQKIGLS+K++ GT++VNEK+K +D+ FQV+E+TK   
Sbjct: 125 KAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIKAVDQNFQVTERTKSVY 184

Query: 200 --------AAGSAIMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLAE 241
                   +AGSA+M NRYV TG SW +  F RVA+AA +V QKTKEKV AE
Sbjct: 185 AAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQAAGEVGQKTKEKVEAE 232

[Close]

BLAST of Sed0027016 vs. TAIR 10
Match: AT5G16840.3 (binding partner of acd11 1 )

HSP 1 Score: 228.0 bits (580), Expect = 8.2e-60
Identity = 134/232 (57.76%), Postives = 174/232 (75.00%), Query Frame = 0


Query: 20  MRTVCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLS 79
           +R+V V NLS  A E D+ EFFSFSGE+E +++ + NE S  A+VTFK+++GAET++LLS
Sbjct: 3   VRSVKVGNLSSGATEHDIKEFFSFSGEVESIDI-QSNEHS--AYVTFKETQGAETAVLLS 62

Query: 80  GATIVDQPVTIVAAPDYNPTAVSNTENTGSETAGSTMQKAEDVVSSMLAKGFTLGNNALN 139
           GA+I DQ V I  AP+Y+P A  + E T S  A S +QKAEDVVSSMLAKGF LG +A+ 
Sbjct: 63  GASIADQSVIIELAPNYSPPAAPHAE-TQSSGAESVVQKAEDVVSSMLAKGFILGKDAVG 122

Query: 140 KAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTK--- 199
           KAK+FDE+H  TSTA++ VASLDQKIGLS+K++ GT++VNEK+K +D+ FQV+E+TK   
Sbjct: 123 KAKAFDEKHGFTSTATAGVASLDQKIGLSQKLTAGTSLVNEKIKAVDQNFQVTERTKSVY 182

Query: 200 --------AAGSAIMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLAE 241
                   +AGSA+M NRYV TG SW +  F RVA+AA +V QKTKEKV AE
Sbjct: 183 AAAEQTVSSAGSAVMKNRYVLTGVSWAAGAFNRVAQAAGEVGQKTKEKVEAE 230

The following BLAST results are available for this feature:

BLAST of Sed0027016 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900618.1	1.8e-93	81.05	binding partner of ACD11 1-like isoform X2 [Benincasa hispida]	[more]
XP_038900617.1	1.8e-93	81.05	binding partner of ACD11 1-like isoform X1 [Benincasa hispida]	[more]
XP_004148092.1	6.9e-93	82.33	binding partner of ACD11 1 [Cucumis sativus] >KGN63397.1 hypothetical protein Cs...	[more]
XP_023007523.1	5.0e-91	79.92	binding partner of ACD11 1-like [Cucurbita maxima]	[more]
XP_023533747.1	6.5e-91	79.92	binding partner of ACD11 1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0027016 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LFD5	1.2e-58	57.76	Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1	[more]
P87216	1.3e-06	25.48	Protein vip1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN...	[more]

BLAST of Sed0027016 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LRG1	3.3e-93	82.33	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G437070 PE=4 SV...	[more]
A0A6J1L7W4	2.4e-91	79.92	binding partner of ACD11 1-like OS=Cucurbita maxima OX=3661 GN=LOC111499987 PE=4...	[more]
A0A5A7TN24	9.1e-91	80.32	Binding partner of ACD11 1-like isoform X1 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A6J1G681	5.9e-90	79.10	binding partner of ACD11 1-like OS=Cucurbita moschata OX=3662 GN=LOC111451146 PE...	[more]
A0A6J1JGG3	3.8e-89	79.20	binding partner of ACD11 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of Sed0027016 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17720.1	5.5e-64	57.38	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G46870.1	2.0e-61	54.88	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G16840.2	3.3e-61	57.76	binding partner of acd11 1	[more]
AT5G16840.1	8.2e-60	57.76	binding partner of acd11 1	[more]
AT5G16840.3	8.2e-60	57.76	binding partner of acd11 1	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 22..91 e-value: 1.4E-8 score: 44.5
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 23..83 e-value: 4.9E-7 score: 29.5
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 21..95 score: 11.878119
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 18..91 e-value: 1.3E-11 score: 46.2
None	No IPR available	PANTHER	PTHR32343	SERINE/ARGININE-RICH SPLICING FACTOR	coord: 20..244
None	No IPR available	PANTHER	PTHR32343:SF37	BINDING PARTNER OF ACD11 1	coord: 20..244
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 16..97

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0027016.1	Sed0027016.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding