Sed0027003 (gene) Chayote v1

Overview


Name	Sed0027003
Type	gene
Organism	Sechium edule (Chayote v1)
Description	dehydration-responsive element-binding protein 2D-like
Location	LG11: 26050024 .. 26050590 (-)
RNA-Seq Expression	Sed0027003
Synteny	Sed0027003

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTAAGGCTAAAAGATCCTCTAGTTCCCAAGCAAGTTCCAGAAAGGGCTGTATGAGAGGCAAAGGGGGCCCTGAAAATGCTTCTTGCACTTACAAGGGTGTTCGCCAGAGAACTTGGGGCAAATGGGTTGCCGAGATTCGCGAGCCGAATCGCGGGGCTCGGCTTTGGCTCGGTACCTTTGATACCTCCCATGATGCTGCCTTGGCTTATGACAATGCCGCCCGTCGCCTTTACGGCCCCGACGCGAAGCTCAATCTCCCTCACCTGTTTCTCCCTTCTTCCTCCTCTGCTTCTTCCTCCTCTGCTTCTTCTTCCTCTGTTTCCGAGGCGGCTACTCCGATGGCGGAAGCGGCAGAGCCTGAGAAGTGTGTGAAAAACATGAGTGGTGGATTTGGAGAGGAGGAAATGGGAGGGCTTTGGAGGCCTATGAGTATTAGTTTGGATGATTCTATTTGGGTTGAGGCTGCCATGTCTTTGGATTTTCCTGTCATGGAAAATCAGAGTGTTTTTCAGGCTAATTTGGTGGATGGGAATGGATGGGATTCAGTGCAATGGTGTTTATGA

mRNA sequence

ATGTTTAAGGCTAAAAGATCCTCTAGTTCCCAAGCAAGTTCCAGAAAGGGCTGTATGAGAGGCAAAGGGGGCCCTGAAAATGCTTCTTGCACTTACAAGGGTGTTCGCCAGAGAACTTGGGGCAAATGGGTTGCCGAGATTCGCGAGCCGAATCGCGGGGCTCGGCTTTGGCTCGGTACCTTTGATACCTCCCATGATGCTGCCTTGGCTTATGACAATGCCGCCCGTCGCCTTTACGGCCCCGACGCGAAGCTCAATCTCCCTCACCTGTTTCTCCCTTCTTCCTCCTCTGCTTCTTCCTCCTCTGCTTCTTCTTCCTCTGTTTCCGAGGCGGCTACTCCGATGGCGGAAGCGGCAGAGCCTGAGAAGTGTGTGAAAAACATGAGTGGTGGATTTGGAGAGGAGGAAATGGGAGGGCTTTGGAGGCCTATGAGTATTAGTTTGGATGATTCTATTTGGGTTGAGGCTGCCATGTCTTTGGATTTTCCTGTCATGGAAAATCAGAGTGTTTTTCAGGCTAATTTGGTGGATGGGAATGGATGGGATTCAGTGCAATGGTGTTTATGA

Coding sequence (CDS)

ATGTTTAAGGCTAAAAGATCCTCTAGTTCCCAAGCAAGTTCCAGAAAGGGCTGTATGAGAGGCAAAGGGGGCCCTGAAAATGCTTCTTGCACTTACAAGGGTGTTCGCCAGAGAACTTGGGGCAAATGGGTTGCCGAGATTCGCGAGCCGAATCGCGGGGCTCGGCTTTGGCTCGGTACCTTTGATACCTCCCATGATGCTGCCTTGGCTTATGACAATGCCGCCCGTCGCCTTTACGGCCCCGACGCGAAGCTCAATCTCCCTCACCTGTTTCTCCCTTCTTCCTCCTCTGCTTCTTCCTCCTCTGCTTCTTCTTCCTCTGTTTCCGAGGCGGCTACTCCGATGGCGGAAGCGGCAGAGCCTGAGAAGTGTGTGAAAAACATGAGTGGTGGATTTGGAGAGGAGGAAATGGGAGGGCTTTGGAGGCCTATGAGTATTAGTTTGGATGATTCTATTTGGGTTGAGGCTGCCATGTCTTTGGATTTTCCTGTCATGGAAAATCAGAGTGTTTTTCAGGCTAATTTGGTGGATGGGAATGGATGGGATTCAGTGCAATGGTGTTTATGA

Protein sequence

MFKAKRSSSSQASSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDNAARRLYGPDAKLNLPHLFLPSSSSASSSSASSSSVSEAATPMAEAAEPEKCVKNMSGGFGEEEMGGLWRPMSISLDDSIWVEAAMSLDFPVMENQSVFQANLVDGNGWDSVQWCL

Homology

[Close]

BLAST of Sed0027003 vs. NCBI nr
Match: KAG6585567.1 (Dehydration-responsive element-binding protein 2D, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 261.5 bits (667), Expect = 5.4e-66
Identity = 135/186 (72.58%), Postives = 144/186 (77.42%), Query Frame = 0


Query: 5   KRSSSSQASSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTS 64
           + SSS+  SSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTS
Sbjct: 20  RASSSAHPSSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTS 79

Query: 65  HDAALAYDNAARRLYGPDAKLNLPHLFLPSSSSASSSSASSSSVSEAATPMAEAAEPEKC 124
           HDAA+AYDNAARRLYG DAKLNLP                           + AAEPEK 
Sbjct: 80  HDAAMAYDNAARRLYGSDAKLNLP---------------------------SSAAEPEKS 139

Query: 125 VKNMSG-GFGEE-EMGGLWRPMSISLDDSIWVEAAMSLDFPVMENQSVFQANLVDGNGWD 184
           V N  G GFGEE E GGLWR MSISLDDSIWV+AAMSLDFPVME+QS+  ANLVDGNGWD
Sbjct: 140 VVNNGGMGFGEEDESGGLWRSMSISLDDSIWVDAAMSLDFPVMEDQSLLAANLVDGNGWD 178

Query: 185 SVQWCL 189
           ++QWCL
Sbjct: 200 TLQWCL 178

[Close]

BLAST of Sed0027003 vs. NCBI nr
Match: XP_023538045.1 (dehydration-responsive element-binding protein 2D-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 261.2 bits (666), Expect = 7.1e-66
Identity = 135/186 (72.58%), Postives = 144/186 (77.42%), Query Frame = 0


Query: 5   KRSSSSQASSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTS 64
           + SSS+  SSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTS
Sbjct: 14  RASSSAHPSSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTS 73

Query: 65  HDAALAYDNAARRLYGPDAKLNLPHLFLPSSSSASSSSASSSSVSEAATPMAEAAEPEKC 124
           HDAA+AYDNAARRLYG DAKLNLP                           + AAEPEK 
Sbjct: 74  HDAAMAYDNAARRLYGSDAKLNLP---------------------------SSAAEPEKS 133

Query: 125 VKNMSG-GFGEE-EMGGLWRPMSISLDDSIWVEAAMSLDFPVMENQSVFQANLVDGNGWD 184
           V N  G GFGEE E GGLWR MSISLDDSIWV+AAMSLDFPVME+QS+  ANLVDGNGWD
Sbjct: 134 VVNNGGMGFGEEDENGGLWRSMSISLDDSIWVDAAMSLDFPVMEDQSLLAANLVDGNGWD 172

Query: 185 SVQWCL 189
           ++QWCL
Sbjct: 194 TLQWCL 172

[Close]

BLAST of Sed0027003 vs. NCBI nr
Match: XP_022951327.1 (dehydration-responsive element-binding protein 2D-like [Cucurbita moschata])

HSP 1 Score: 261.2 bits (666), Expect = 7.1e-66
Identity = 135/186 (72.58%), Postives = 144/186 (77.42%), Query Frame = 0


Query: 5   KRSSSSQASSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTS 64
           + SSS+  SSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTS
Sbjct: 19  RASSSAHPSSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTS 78

Query: 65  HDAALAYDNAARRLYGPDAKLNLPHLFLPSSSSASSSSASSSSVSEAATPMAEAAEPEKC 124
           HDAA+AYDNAARRLYG DAKLNLP                           + AAEPEK 
Sbjct: 79  HDAAMAYDNAARRLYGSDAKLNLP---------------------------SSAAEPEKS 138

Query: 125 VKNMSG-GFGEE-EMGGLWRPMSISLDDSIWVEAAMSLDFPVMENQSVFQANLVDGNGWD 184
           V N  G GFGEE E GGLWR MSISLDDSIWV+AAMSLDFPVME+QS+  ANLVDGNGWD
Sbjct: 139 VVNNGGMGFGEEDENGGLWRSMSISLDDSIWVDAAMSLDFPVMEDQSLLAANLVDGNGWD 177

Query: 185 SVQWCL 189
           ++QWCL
Sbjct: 199 TLQWCL 177

[Close]

BLAST of Sed0027003 vs. NCBI nr
Match: XP_023002886.1 (dehydration-responsive element-binding protein 2D-like [Cucurbita maxima])

HSP 1 Score: 259.6 bits (662), Expect = 2.1e-65
Identity = 134/186 (72.04%), Postives = 143/186 (76.88%), Query Frame = 0


Query: 5   KRSSSSQASSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTS 64
           + SSS+  SSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTS
Sbjct: 22  RASSSAHPSSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTS 81

Query: 65  HDAALAYDNAARRLYGPDAKLNLPHLFLPSSSSASSSSASSSSVSEAATPMAEAAEPEKC 124
           HDAA+AYDNAARRLYG DAKLNLP                           + AAEPEK 
Sbjct: 82  HDAAMAYDNAARRLYGSDAKLNLP---------------------------SSAAEPEKS 141

Query: 125 VKNMSG-GFGEE-EMGGLWRPMSISLDDSIWVEAAMSLDFPVMENQSVFQANLVDGNGWD 184
           V N  G GFGEE E GGLWR MSISLDDSIWV+A MSLDFPVME+QS+  ANLVDGNGWD
Sbjct: 142 VVNNGGMGFGEEDENGGLWRSMSISLDDSIWVDATMSLDFPVMEDQSLLAANLVDGNGWD 180

Query: 185 SVQWCL 189
           ++QWCL
Sbjct: 202 TLQWCL 180

[Close]

BLAST of Sed0027003 vs. NCBI nr
Match: XP_023546902.1 (dehydration-responsive element-binding protein 2D-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 244.2 bits (622), Expect = 9.0e-61
Identity = 133/200 (66.50%), Postives = 151/200 (75.50%), Query Frame = 0


Query: 3   KAKRS-SSSQASSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTF 62
           + KRS S+S A+SRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTF
Sbjct: 57  QVKRSPSASHATSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTF 116

Query: 63  DTSHDAALAYDNAARRLYGPDAKLNLPH-----------LFLPSSSSASSSSASSSSVSE 122
           DTSHDAA+AYDNAARRLYG +AKLNLPH           L LP S S+SS SA+++   E
Sbjct: 117 DTSHDAAMAYDNAARRLYGSEAKLNLPHLSPNLQHHNHPLLLPVSVSSSSDSAAAT--VE 176

Query: 123 AATPMAEAAEPEKCVKNMSGGFGEEEMGGLWRPMSISLDDSIWVEAAMSLDFPVMEN--- 182
               ++ A       +   G   EEE+GGLWR MSISLDDSIW EAAMSLDFPV+E+   
Sbjct: 177 DVGSISSAPHDNSSSRMRFGEEEEEEIGGLWRSMSISLDDSIWAEAAMSLDFPVVEDRDR 236

Query: 183 QSVFQANLVDGNGWDSVQWC 188
           Q VF A+ VD NGWD++QWC
Sbjct: 237 QGVFAADFVDSNGWDTLQWC 254

[Close]

BLAST of Sed0027003 vs. ExPASy Swiss-Prot
Match: Q9LQZ2 (Dehydration-responsive element-binding protein 2D OS=Arabidopsis thaliana OX=3702 GN=DREB2D PE=2 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.8e-41
Identity = 95/163 (58.28%), Postives = 110/163 (67.48%), Query Frame = 0


Query: 5   KRSSSSQASSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTS 64
           K+  + QASSRKGCMRGKGGP+NASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTS
Sbjct: 15  KKQRTVQASSRKGCMRGKGGPDNASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTS 74

Query: 65  HDAALAYDNAARRLYGPDAKLNLPHLFLPSSSSASSSSASSSSVSEAATPMAEAAEPEKC 124
            +AALAYD+AAR+LYGP+A LNLP   L S    +SS AS ++ S      + +     C
Sbjct: 75  REAALAYDSAARKLYGPEAHLNLPE-SLRSYPKTASSPASQTTPSSNTGGKSSSDSESPC 134

Query: 125 VKNMSGGFGEEEMGGLWRPMSISL----DDSIWVEAAMSLDFP 164
             N     G       W  +++ L    D SIW EA MSL FP
Sbjct: 135 SSNEMSSCGRVTEEISWEHINVDLPVMDDSSIWEEATMSLGFP 176

[Close]

BLAST of Sed0027003 vs. ExPASy Swiss-Prot
Match: P61827 (Dehydration-responsive element-binding protein 2G OS=Arabidopsis thaliana OX=3702 GN=DREB2G PE=1 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 9.1e-32
Identity = 61/76 (80.26%), Postives = 71/76 (93.42%), Query Frame = 0


Query: 14 SRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDN 73
          SRKGCM+GKGGPENA+CT++GVRQRTWGKWVAEIREPNRG RLWLGTF+TS +AA+AYD 
Sbjct: 16 SRKGCMKGKGGPENATCTFRGVRQRTWGKWVAEIREPNRGTRLWLGTFNTSVEAAMAYDE 75

Query: 74 AARRLYGPDAKLNLPH 90
          AA++LYG +AKLNL H
Sbjct: 76 AAKKLYGHEAKLNLVH 91

[Close]

BLAST of Sed0027003 vs. ExPASy Swiss-Prot
Match: Q8LFR2 (Dehydration-responsive element-binding protein 2C OS=Arabidopsis thaliana OX=3702 GN=DREB2C PE=2 SV=2)

HSP 1 Score: 136.0 bits (341), Expect = 4.5e-31
Identity = 71/127 (55.91%), Postives = 95/127 (74.80%), Query Frame = 0


Query: 14  SRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDN 73
           SRKGCM+GKGGPEN  C Y+GVRQR WGKWVAEIREP+ GARLWLGTF +S++AALAYD 
Sbjct: 54  SRKGCMKGKGGPENGICDYRGVRQRRWGKWVAEIREPDGGARLWLGTFSSSYEAALAYDE 113

Query: 74  AARRLYGPDAKLNLPHLFLPSSSSASSSSASSSSVSEAATPMAEAAEPEKCVK---NMSG 133
           AA+ +YG  A+LNLP +     ++ SSS+A++++VS + T  ++  E E C +   N S 
Sbjct: 114 AAKAIYGQSARLNLPEI-----TNRSSSTAATATVSGSVTAFSD--ESEVCAREDTNASS 173

Query: 134 GFGEEEM 138
           GFG+ ++
Sbjct: 174 GFGQVKL 173

[Close]

BLAST of Sed0027003 vs. ExPASy Swiss-Prot
Match: Q10R18 (Dehydration-responsive element-binding protein 2E OS=Oryza sativa subsp. japonica OX=39947 GN=DREB2E PE=2 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 9.4e-29
Identity = 66/108 (61.11%), Postives = 83/108 (76.85%), Query Frame = 0


Query: 15  RKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDNA 74
           +KG  RGKGGP+NA+C Y+GVRQRTWGKWVAEIREPN+  RLWLG+F T+ +AALAYD A
Sbjct: 11  KKGPTRGKGGPQNAACEYRGVRQRTWGKWVAEIREPNKRTRLWLGSFATAEEAALAYDEA 70

Query: 75  ARRLYGPDAKLNLPHLFLPSSSSA--------SSSSASSSSVSEAATP 115
           ARRLYGPDA LNLPHL   S+++A        +S++A+++    AA P
Sbjct: 71  ARRLYGPDAFLNLPHLRAASAAAAHQRLRWLPASAAAAAARGGAAAVP 118

[Close]

BLAST of Sed0027003 vs. ExPASy Swiss-Prot
Match: Q84ZA1 (Dehydration-responsive element-binding protein 2C OS=Oryza sativa subsp. japonica OX=39947 GN=DREB2C PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 4.7e-28
Identity = 67/119 (56.30%), Postives = 84/119 (70.59%), Query Frame = 0


Query: 14  SRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDN 73
           SRKGCM+GKGGPEN  C ++GVRQRTWGKWVAEIREPNRGARLWLGTF+T+ DAA AYD+
Sbjct: 37  SRKGCMKGKGGPENQRCPFRGVRQRTWGKWVAEIREPNRGARLWLGTFNTALDAARAYDS 96

Query: 74  AARRLYGPDAKLNL---------------PHLFLPSSSSASSSSASSSSVSEAATPMAE 118
           AAR LYG  A+LNL               P +  P S++  S+++SS++  +  T M +
Sbjct: 97  AARALYGDCARLNLLLAAATAGAPPAAATPSVATPCSTNDDSNNSSSTTHQQQLTTMLQ 155

[Close]

BLAST of Sed0027003 vs. ExPASy TrEMBL
Match: A0A6J1GHB5 (dehydration-responsive element-binding protein 2D-like OS=Cucurbita moschata OX=3662 GN=LOC111454192 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 3.4e-66
Identity = 135/186 (72.58%), Postives = 144/186 (77.42%), Query Frame = 0


Query: 5   KRSSSSQASSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTS 64
           + SSS+  SSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTS
Sbjct: 19  RASSSAHPSSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTS 78

Query: 65  HDAALAYDNAARRLYGPDAKLNLPHLFLPSSSSASSSSASSSSVSEAATPMAEAAEPEKC 124
           HDAA+AYDNAARRLYG DAKLNLP                           + AAEPEK 
Sbjct: 79  HDAAMAYDNAARRLYGSDAKLNLP---------------------------SSAAEPEKS 138

Query: 125 VKNMSG-GFGEE-EMGGLWRPMSISLDDSIWVEAAMSLDFPVMENQSVFQANLVDGNGWD 184
           V N  G GFGEE E GGLWR MSISLDDSIWV+AAMSLDFPVME+QS+  ANLVDGNGWD
Sbjct: 139 VVNNGGMGFGEEDENGGLWRSMSISLDDSIWVDAAMSLDFPVMEDQSLLAANLVDGNGWD 177

Query: 185 SVQWCL 189
           ++QWCL
Sbjct: 199 TLQWCL 177

[Close]

BLAST of Sed0027003 vs. ExPASy TrEMBL
Match: A0A6J1KMK2 (dehydration-responsive element-binding protein 2D-like OS=Cucurbita maxima OX=3661 GN=LOC111496622 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 1.0e-65
Identity = 134/186 (72.04%), Postives = 143/186 (76.88%), Query Frame = 0


Query: 5   KRSSSSQASSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTS 64
           + SSS+  SSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTS
Sbjct: 22  RASSSAHPSSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTS 81

Query: 65  HDAALAYDNAARRLYGPDAKLNLPHLFLPSSSSASSSSASSSSVSEAATPMAEAAEPEKC 124
           HDAA+AYDNAARRLYG DAKLNLP                           + AAEPEK 
Sbjct: 82  HDAAMAYDNAARRLYGSDAKLNLP---------------------------SSAAEPEKS 141

Query: 125 VKNMSG-GFGEE-EMGGLWRPMSISLDDSIWVEAAMSLDFPVMENQSVFQANLVDGNGWD 184
           V N  G GFGEE E GGLWR MSISLDDSIWV+A MSLDFPVME+QS+  ANLVDGNGWD
Sbjct: 142 VVNNGGMGFGEEDENGGLWRSMSISLDDSIWVDATMSLDFPVMEDQSLLAANLVDGNGWD 180

Query: 185 SVQWCL 189
           ++QWCL
Sbjct: 202 TLQWCL 180

[Close]

BLAST of Sed0027003 vs. ExPASy TrEMBL
Match: A0A6J1HEF2 (dehydration-responsive element-binding protein 2D-like OS=Cucurbita moschata OX=3662 GN=LOC111462736 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 7.4e-61
Identity = 133/200 (66.50%), Postives = 153/200 (76.50%), Query Frame = 0


Query: 3   KAKRS-SSSQASSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTF 62
           + KRS S+S A+SRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTF
Sbjct: 56  QVKRSPSASHATSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTF 115

Query: 63  DTSHDAALAYDNAARRLYGPDAKLNLPH-----------LFLPSSSSASSSSASSSSVSE 122
           DTSHDAA+AYDNAARRLYG +AKLNLPH           L LP S S+SS SA +++V +
Sbjct: 116 DTSHDAAMAYDNAARRLYGSEAKLNLPHLSPNLQLHNHPLLLPGSVSSSSDSA-AATVED 175

Query: 123 AATPMAEAAEPEKCVKNMSGGFGEEEMGGLWRPMSISLDDSIWVEAAMSLDFPVMEN--- 182
             +    +A  +   +   G   EEE+GGLWR MSISLDDSIW EAAMSLDFPV+E+   
Sbjct: 176 VGS--ISSAPHDNSSRMRFGEEEEEEIGGLWRSMSISLDDSIWAEAAMSLDFPVVEDRDR 235

Query: 183 QSVFQANLVDGNGWDSVQWC 188
           Q VF A+ VD NGWD++QWC
Sbjct: 236 QGVFAADFVDSNGWDTLQWC 252

[Close]

BLAST of Sed0027003 vs. ExPASy TrEMBL
Match: A0A6J1K5U2 (dehydration-responsive element-binding protein 2D-like OS=Cucurbita maxima OX=3661 GN=LOC111491948 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 8.2e-60
Identity = 136/206 (66.02%), Postives = 149/206 (72.33%), Query Frame = 0


Query: 3   KAKRS-SSSQASSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTF 62
           + KRS S+S A+SRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTF
Sbjct: 56  QVKRSPSTSHATSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTF 115

Query: 63  DTSHDAALAYDNAARRLYGPDAKLNLPH---------LFLPSSSSASSSSA--------S 122
           DTSHDAA+AYDNAARRLYG DAKLNLPH         L LP S S+SS SA        S
Sbjct: 116 DTSHDAAMAYDNAARRLYGSDAKLNLPHLSPNLQHHPLLLPVSVSSSSDSAAATVEDVGS 175

Query: 123 SSSVSEAATPMAEAAEPEKCVKNMSGGFGEEEMGGLWRPMSISLDDSIWVEAAMSLDFPV 182
            SSV    +      E E+          EEE+GGLW+ MSISLDDSIW EAAMSLDFPV
Sbjct: 176 ISSVPHDNSSRMRFGEEEE----------EEEIGGLWKSMSISLDDSIWAEAAMSLDFPV 235

Query: 183 MEN---QSVFQANLVDGNGWDSVQWC 188
           ME+   Q  F A+ VD NGWD++QWC
Sbjct: 236 MEDRDRQGDFAADFVDSNGWDTLQWC 251

[Close]

BLAST of Sed0027003 vs. ExPASy TrEMBL
Match: A0A5A7VDQ3 (Dehydration-responsive element-binding protein 2D OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005340 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 4.7e-55
Identity = 128/204 (62.75%), Postives = 146/204 (71.57%), Query Frame = 0


Query: 4   AKRSSSSQASSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDT 63
           +   ++ +ASSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDT
Sbjct: 7   SNNKNNKKASSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDT 66

Query: 64  SHDAALAYDNAARRLYGPDAKLNLPHLFLPSSSSASSSS-------------ASSSSVSE 123
           S+DAALAYDNAARRLYG DAKLNLP +   +S S SSSS             A++S+ + 
Sbjct: 67  SYDAALAYDNAARRLYGSDAKLNLPLISSSTSVSVSSSSSTTSDNNNNNSVVATASTYNN 126

Query: 124 AATPMAEAAEPEKCVKNMSGGF---GEEEMGGLWRPMSISLDDSIWVEAAMSLDFP-VME 183
              PM E         + +  F    EE++GGLWR MSISLDDSIWVEAAMSLDFP +ME
Sbjct: 127 KVNPMVEDVASSSSSISNNKRFREDEEEQIGGLWRAMSISLDDSIWVEAAMSLDFPLLME 186

Query: 184 NQSVFQANLVDGN---GWD-SVQW 187
            Q+ F  NLVD N   GWD S+ W
Sbjct: 187 QQTSFSPNLVDTNPNPGWDSSIPW 210

[Close]

BLAST of Sed0027003 vs. TAIR 10
Match: AT1G75490.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 169.9 bits (429), Expect = 2.0e-42
Identity = 95/163 (58.28%), Postives = 110/163 (67.48%), Query Frame = 0


Query: 5   KRSSSSQASSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTS 64
           K+  + QASSRKGCMRGKGGP+NASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTS
Sbjct: 15  KKQRTVQASSRKGCMRGKGGPDNASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTS 74

Query: 65  HDAALAYDNAARRLYGPDAKLNLPHLFLPSSSSASSSSASSSSVSEAATPMAEAAEPEKC 124
            +AALAYD+AAR+LYGP+A LNLP   L S    +SS AS ++ S      + +     C
Sbjct: 75  REAALAYDSAARKLYGPEAHLNLPE-SLRSYPKTASSPASQTTPSSNTGGKSSSDSESPC 134

Query: 125 VKNMSGGFGEEEMGGLWRPMSISL----DDSIWVEAAMSLDFP 164
             N     G       W  +++ L    D SIW EA MSL FP
Sbjct: 135 SSNEMSSCGRVTEEISWEHINVDLPVMDDSSIWEEATMSLGFP 176

[Close]

BLAST of Sed0027003 vs. TAIR 10
Match: AT5G18450.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 138.3 bits (347), Expect = 6.5e-33
Identity = 61/76 (80.26%), Postives = 71/76 (93.42%), Query Frame = 0


Query: 14 SRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDN 73
          SRKGCM+GKGGPENA+CT++GVRQRTWGKWVAEIREPNRG RLWLGTF+TS +AA+AYD 
Sbjct: 16 SRKGCMKGKGGPENATCTFRGVRQRTWGKWVAEIREPNRGTRLWLGTFNTSVEAAMAYDE 75

Query: 74 AARRLYGPDAKLNLPH 90
          AA++LYG +AKLNL H
Sbjct: 76 AAKKLYGHEAKLNLVH 91

[Close]

BLAST of Sed0027003 vs. TAIR 10
Match: AT2G40340.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 136.0 bits (341), Expect = 3.2e-32
Identity = 71/127 (55.91%), Postives = 95/127 (74.80%), Query Frame = 0


Query: 14  SRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAALAYDN 73
           SRKGCM+GKGGPEN  C Y+GVRQR WGKWVAEIREP+ GARLWLGTF +S++AALAYD 
Sbjct: 54  SRKGCMKGKGGPENGICDYRGVRQRRWGKWVAEIREPDGGARLWLGTFSSSYEAALAYDE 113

Query: 74  AARRLYGPDAKLNLPHLFLPSSSSASSSSASSSSVSEAATPMAEAAEPEKCVK---NMSG 133
           AA+ +YG  A+LNLP +     ++ SSS+A++++VS + T  ++  E E C +   N S 
Sbjct: 114 AAKAIYGQSARLNLPEI-----TNRSSSTAATATVSGSVTAFSD--ESEVCAREDTNASS 173

Query: 134 GFGEEEM 138
           GFG+ ++
Sbjct: 174 GFGQVKL 173

[Close]

BLAST of Sed0027003 vs. TAIR 10
Match: AT5G05410.1 (DRE-binding protein 2A )

HSP 1 Score: 124.4 bits (311), Expect = 9.7e-29
Identity = 68/130 (52.31%), Postives = 88/130 (67.69%), Query Frame = 0


Query: 5   KRSSSSQASSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTS 64
           K+       S+KGCM+GKGGPEN+ C+++GVRQR WGKWVAEIREPNRG+RLWLGTF T+
Sbjct: 52  KKRKVPAKGSKKGCMKGKGGPENSRCSFRGVRQRIWGKWVAEIREPNRGSRLWLGTFPTA 111

Query: 65  HDAALAYDNAARRLYGPDAKLNLPHLFLPSSSSASSSSASSSSVSEAATP---MAEAAEP 124
            +AA AYD AA+ +YGP A+LN P     S +S  +S++S S V    TP     +  +P
Sbjct: 112 QEAASAYDEAAKAMYGPLARLNFPR----SDASEVTSTSSQSEVCTVETPGCVHVKTEDP 171

Query: 125 EKCVKNMSGG 132
           +   K  SGG
Sbjct: 172 DCESKPFSGG 177

[Close]

BLAST of Sed0027003 vs. TAIR 10
Match: AT5G05410.2 (DRE-binding protein 2A )

HSP 1 Score: 124.4 bits (311), Expect = 9.7e-29
Identity = 68/130 (52.31%), Postives = 88/130 (67.69%), Query Frame = 0


Query: 5   KRSSSSQASSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTS 64
           K+       S+KGCM+GKGGPEN+ C+++GVRQR WGKWVAEIREPNRG+RLWLGTF T+
Sbjct: 52  KKRKVPAKGSKKGCMKGKGGPENSRCSFRGVRQRIWGKWVAEIREPNRGSRLWLGTFPTA 111

Query: 65  HDAALAYDNAARRLYGPDAKLNLPHLFLPSSSSASSSSASSSSVSEAATP---MAEAAEP 124
            +AA AYD AA+ +YGP A+LN P     S +S  +S++S S V    TP     +  +P
Sbjct: 112 QEAASAYDEAAKAMYGPLARLNFPR----SDASEVTSTSSQSEVCTVETPGCVHVKTEDP 171

Query: 125 EKCVKNMSGG 132
           +   K  SGG
Sbjct: 172 DCESKPFSGG 177

The following BLAST results are available for this feature:

BLAST of Sed0027003 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6585567.1	5.4e-66	72.58	Dehydration-responsive element-binding protein 2D, partial [Cucurbita argyrosper...	[more]
XP_023538045.1	7.1e-66	72.58	dehydration-responsive element-binding protein 2D-like [Cucurbita pepo subsp. pe...	[more]
XP_022951327.1	7.1e-66	72.58	dehydration-responsive element-binding protein 2D-like [Cucurbita moschata]	[more]
XP_023002886.1	2.1e-65	72.04	dehydration-responsive element-binding protein 2D-like [Cucurbita maxima]	[more]
XP_023546902.1	9.0e-61	66.50	dehydration-responsive element-binding protein 2D-like [Cucurbita pepo subsp. pe...	[more]

BLAST of Sed0027003 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQZ2	2.8e-41	58.28	Dehydration-responsive element-binding protein 2D OS=Arabidopsis thaliana OX=370...	[more]
P61827	9.1e-32	80.26	Dehydration-responsive element-binding protein 2G OS=Arabidopsis thaliana OX=370...	[more]
Q8LFR2	4.5e-31	55.91	Dehydration-responsive element-binding protein 2C OS=Arabidopsis thaliana OX=370...	[more]
Q10R18	9.4e-29	61.11	Dehydration-responsive element-binding protein 2E OS=Oryza sativa subsp. japonic...	[more]
Q84ZA1	4.7e-28	56.30	Dehydration-responsive element-binding protein 2C OS=Oryza sativa subsp. japonic...	[more]

BLAST of Sed0027003 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GHB5	3.4e-66	72.58	dehydration-responsive element-binding protein 2D-like OS=Cucurbita moschata OX=...	[more]
A0A6J1KMK2	1.0e-65	72.04	dehydration-responsive element-binding protein 2D-like OS=Cucurbita maxima OX=36...	[more]
A0A6J1HEF2	7.4e-61	66.50	dehydration-responsive element-binding protein 2D-like OS=Cucurbita moschata OX=...	[more]
A0A6J1K5U2	8.2e-60	66.02	dehydration-responsive element-binding protein 2D-like OS=Cucurbita maxima OX=36...	[more]
A0A5A7VDQ3	4.7e-55	62.75	Dehydration-responsive element-binding protein 2D OS=Cucumis melo var. makuwa OX...	[more]

BLAST of Sed0027003 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75490.1	2.0e-42	58.28	Integrase-type DNA-binding superfamily protein	[more]
AT5G18450.1	6.5e-33	80.26	Integrase-type DNA-binding superfamily protein	[more]
AT2G40340.1	3.2e-32	55.91	Integrase-type DNA-binding superfamily protein	[more]
AT5G05410.1	9.7e-29	52.31	DRE-binding protein 2A	[more]
AT5G05410.2	9.7e-29	52.31	DRE-binding protein 2A	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 32..43 score: 64.7 coord: 54..70 score: 59.36
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 31..94 e-value: 9.2E-37 score: 138.1
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 31..80 e-value: 1.7E-14 score: 53.7
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 31..88 score: 22.08882
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 30..90 e-value: 1.82699E-30 score: 104.276
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 31..89 e-value: 4.2E-25 score: 89.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..112
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..120
None	No IPR available	PANTHER	PTHR31241	DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C	coord: 129..174
None	No IPR available	PANTHER	PTHR31241:SF53	DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2D	coord: 8..113
None	No IPR available	PANTHER	PTHR31241:SF53	DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2D	coord: 129..174
None	No IPR available	PANTHER	PTHR31241	DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C	coord: 8..113
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 31..89

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0027003.1	Sed0027003.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000976	transcription cis-regulatory region binding
molecular_function	GO:0003677	DNA binding