Sed0026974 (gene) Chayote v1

Overview


Name	Sed0026974
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Location	LG02: 6408125 .. 6410724 (-)
RNA-Seq Expression	Sed0026974
Synteny	Sed0026974

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCAATGACAAGGTTATTGACTGGCGAGCCAAGGTTCGGAATGGGGCGTTTGGATTCGAGGACATGGCAGATGTGGAGTATAATGTGATGGTTACATCGCTACTAGAAAAACATATGAAGGTCGCAATCAATGTTCCTCACACCGAAGGATACTACTGGCTTAACTTTGTTAAGATTAGTCTAATGCCGACCACTTATGACACCATCATCACACGGATAAGCATAGAACCGCCTATCACACTTGCAAACAGAGCAAGCGAAGAGAAACATCATGAAGAGATCTCGCTGAGTAGAAATAGGAATATAGAAATTGAAACCTCCCAATGCGATGAGGTAAAGTAAGACGAATACGATGCTACACAAGAGATAAAATCCCAGGTGAAGGATGCAGAAGTCGTTGAGGACTATGAAGAAGAAGCTGAAAAGAGGAGCCAAGCAGAAATAATTGAAGAAGATTTGGAGGTGCTCGTCAATAAAATAAAGCATGAACAAGAAAAGGACTCGGTGGAGGATGAGTCAGAAAAATTCACCGAAGAAGATAAGCTCGAAGAAGAATTTGGAGAAGAAGAAGAACCCGAGAAGGAGGGTGAACATGGTAAAGGGCCAAAGAAGAAAGATCTGAAGGTGAAAGAGAAGAGTCTAAGCATACCTCAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAATAGTAAGCCCAACTATTGAAACACTAGGAAGAAGAGAATGAACGCTTTTGGGGCATCCCCCAAAATGTCCCCCGCATCAAAGAAGAGAAAGATGGAGAGGAGTGAATCTTCAACGATGGCAGAAAAGTTGGCTTCTCCCAAACCGAAAAAAGGCTACGGGTATCTCAAGGATGAGAAGTTCTAGCAAAAGCAAGGATTTTGGAAGTTAAACCTACCAGATTGCATTAAGCGAACAATCAAAGAAAATCAGGACATTCGTGCGACCCTACATTGGAGCCCACTCTAAGTGGGTGCAAGAGTTCTACAACAACCTCAACAAAGAAGGGAGGAGCAAACAATGGTCAATGACAAGGTTATTGACTGGCGAGCCAAGGTTCGGAATGGGGCGTTTGGATTCGAGGACATGGCAGATGTGGAGTATAATGTGATGGTTACATCGCTACTAGAAAAACATATGAAGGTCGCAATCAATGTTCCTCACACCGAAGGATACTACTGGCTTAACCTTGTTAAGATTAGTCTAATACCGACCCCCTATGACACCATCATCACACGGATAAGCATAGAACCGCCTATCACACTTGCAAGCAGAGCAAGCGAAGAGAAACATCATGAAGAGATCTCGCTGAGTAGAAATAGGAATATTGAAATTGAAACCTCCCAATGCGATGAGGTAAAGTAAGACGAACACGATGCTACACAAGAGATAAAATCCCAGGTGAAGGATGCAGAAGTCGTTGAGGACAATGAAGAAGAAGTCAAAAGAGGAGCCAAGCGAAAATAATTGAAGAAGATTTGGAGGTGCTCATCAATAAAATAAAGCATGAACAAGAAAAGGACTCGGTGGAGGATGAGTTAGAAAAATTCACCGAAGAAGATAAGCTCGAAGAAGAATTTGGAGAAGAAGAAGAACCCGAGAAGGAGGGTGAAGTTGGTAAAGGGCCAAAGAAGAAAGATCTGAAGGTGAAAGAGAAGAGTCTAAGGATACCTTAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGTAGAAGAAGAAGAAGAAGAAAATAGTAAGCCCAACTATCGAAACACTAGGAAGAAGAGAATGAACGCTTTTGGGGCATCCCCCAAAATGTCCCCCGCATCAAAGAAGAGAAAGATGGAGAGGAGTGAATCTTCAGCGATGGCAGAAAAGTTGGCTTCTGCCAAACCGAAAAAAGGCTACGGGCTTCTCAAGGATGAGAAGTTCTAGCAAAAGCAAGGATTTTGGAAGTTAAACCTACCAGATTGCATTAAGCGAACAATCAAAGAAAATCAGGACATTCGTGCGACCCTACATTGGAGCCCACTCTAAGTGGGTGCAAGAGTTCTACAACAACCTCAACAAAGAAGGGAGGAGCAAACAATGGTCAATGACAAGGTTATTGATCAAGAGCCAAGGTTCGAATGGGGCGTTTGGATTCGAGGACATGGCAGATGTGGAGTATAATGTGATGGTTACATCGCTACTAGAAAAACATATGAAGGTCGCAATCAATGTTCCTCACACCGAAGGATACTACTGGCTTAACTTTGTTAAGATTAGTCTAATGCCGACCACCTATGACACCATCATCACACGGATAAGCATAGAACCGCCTATCACACTTGCAAGCAGAGCAAGCGAAGAGAAACATCATGAAGAGATCTCGCTGAGTAGAAATAGGAATATAGAAATTGAAACCTCCCAATGCGATGAGGTAAAGTAAGACGAACACGATGCTACACAAGAGATAAAATCCCAGGTGAAGGATGCAGAAGTCGTTGAGGACTATGAAGAAGAAGCTGAAAAGAGGAGCCAAGCAGAAATAATTGAAGAAGATTTGGAGGTGCTCGTCAATAAAATAAAGCATGAACAAGAAAAGGACTCGGGTGGAGGATGA

mRNA sequence

ATGGTCAATGACAAGGTTATTGACTGGCGAGCCAAGGTTCGGAATGGGGCGTTTGGATTCGAGGACATGGCAGATGTGGAGTATAATGTGATGGTTACATCGCTACTAGAAAAACATATGAAGGTCGCAATCAATGTTCCTCACACCGAAGGATACTACTGGCTTAACTTTGTTAAGATTAGTCTAATGCCGACCACTTATGACACCATCATCACACGGATAAGCATAGAACCGCCTATCACACTTGCAAACAGAGCAAGCGAAGAGAAACATCATGAAGAGATCTCGCTGAGTAGAAATAGGAATATAGAAATTGAAACCTCCCAATGCGATGAGGTGAAGGATGCAGAAGTCGTTGAGGACTATGAAGAAGAAGCTGAAAAGAGGAGCCAAGCAGAAATAATTGAAGAAGATTTGGAGGTGCTCGTCAATAAAATAAAGCATGAACAAGAAAAGGACTCGGTGGAGGATGAGTCAGAAAAATTCACCGAAGAAGATAAGCTCGAAGAAGAATTTGGAGAAGAAGAAGAACCCGAGAAGGAGGGTGAACATGTGGGTGCAAGAGTTCTACAACAACCTCAACAAAGAAGGGAGGAGCAAACAATGGTCAATGACAAGGTTATTGACTGGCGAGCCAAGGTTCGGAATGGGGCGTTTGGATTCGAGGACATGGCAGATGTGGAGTATAATGTGATGGTTACATCGCTACTAGAAAAACATATGAAGGTCGCAATCAATGTTCCTCACACCGAAGGATACTACTGGCTTAACCTTGTTAAGATTAGTCTAATACCGACCCCCTATGACACCATCATCACACGGATAAGCATAGAACCGCCTATCACACTTGCAAGCAGAGCAAGCGAAGAGAAACATCATGAAGAGATCTCGCTGAGTAGAAATAGGAATATTGAAATTGAAACCTCCCAATGCGATGAGGTGCTCATCAATAAAATAAAGCATGAACAAGAAAAGGACTCGGTGGAGGATGAGTTAGAAAAATTCACCGAAGAAGATAAGCTCGAAGAAGAATTTGGAGAAGAAGAAGAACCCGAGAAGGAGGGTGAAATTGCATTAAGCGAACAATCAAAGAAAATCAGGACATTCGTGCGACCCTACATTGGAGCCCACTCTAAGTGGGTGCAAGAGTTCTACAACAACCTCAACAAAGAAGGGAGGAGCAAACAATGGTCAATGACAAGGTTATTGATCAAGAGCCAAGGTTCGAATGGGGCGTTTGGATTCGAGGACATGGCAGATGTGGAGTATAATGTGATGGTTACATCGCTACTAGAAAAACATATGAAGGTCGCAATCAATGTTCCTCACACCGAAGGATACTACTGGCTTAACTTTGTTAAGATTAGTCTAATGCCGACCACCTATGACACCATCATCACACGGATAAGCATAGAACCGCCTATCACACTTGCAAGCAGAGCAAGCGAAGAGAAACATCATGAAGAGATCTCGCTGAGTAGAAATAGGAATATAGAAATTGAAACCTCCCAATGCGATGAGGTGAAGGATGCAGAAGTCGTTGAGGACTATGAAGAAGAAGCTGAAAAGAGGAGCCAAGCAGAAATAATTGAAGAAGATTTGGAGGTGCTCGTCAATAAAATAAAGCATGAACAAGAAAAGGACTCGGGTGGAGGATGA

Coding sequence (CDS)

ATGGTCAATGACAAGGTTATTGACTGGCGAGCCAAGGTTCGGAATGGGGCGTTTGGATTCGAGGACATGGCAGATGTGGAGTATAATGTGATGGTTACATCGCTACTAGAAAAACATATGAAGGTCGCAATCAATGTTCCTCACACCGAAGGATACTACTGGCTTAACTTTGTTAAGATTAGTCTAATGCCGACCACTTATGACACCATCATCACACGGATAAGCATAGAACCGCCTATCACACTTGCAAACAGAGCAAGCGAAGAGAAACATCATGAAGAGATCTCGCTGAGTAGAAATAGGAATATAGAAATTGAAACCTCCCAATGCGATGAGGTGAAGGATGCAGAAGTCGTTGAGGACTATGAAGAAGAAGCTGAAAAGAGGAGCCAAGCAGAAATAATTGAAGAAGATTTGGAGGTGCTCGTCAATAAAATAAAGCATGAACAAGAAAAGGACTCGGTGGAGGATGAGTCAGAAAAATTCACCGAAGAAGATAAGCTCGAAGAAGAATTTGGAGAAGAAGAAGAACCCGAGAAGGAGGGTGAACATGTGGGTGCAAGAGTTCTACAACAACCTCAACAAAGAAGGGAGGAGCAAACAATGGTCAATGACAAGGTTATTGACTGGCGAGCCAAGGTTCGGAATGGGGCGTTTGGATTCGAGGACATGGCAGATGTGGAGTATAATGTGATGGTTACATCGCTACTAGAAAAACATATGAAGGTCGCAATCAATGTTCCTCACACCGAAGGATACTACTGGCTTAACCTTGTTAAGATTAGTCTAATACCGACCCCCTATGACACCATCATCACACGGATAAGCATAGAACCGCCTATCACACTTGCAAGCAGAGCAAGCGAAGAGAAACATCATGAAGAGATCTCGCTGAGTAGAAATAGGAATATTGAAATTGAAACCTCCCAATGCGATGAGGTGCTCATCAATAAAATAAAGCATGAACAAGAAAAGGACTCGGTGGAGGATGAGTTAGAAAAATTCACCGAAGAAGATAAGCTCGAAGAAGAATTTGGAGAAGAAGAAGAACCCGAGAAGGAGGGTGAAATTGCATTAAGCGAACAATCAAAGAAAATCAGGACATTCGTGCGACCCTACATTGGAGCCCACTCTAAGTGGGTGCAAGAGTTCTACAACAACCTCAACAAAGAAGGGAGGAGCAAACAATGGTCAATGACAAGGTTATTGATCAAGAGCCAAGGTTCGAATGGGGCGTTTGGATTCGAGGACATGGCAGATGTGGAGTATAATGTGATGGTTACATCGCTACTAGAAAAACATATGAAGGTCGCAATCAATGTTCCTCACACCGAAGGATACTACTGGCTTAACTTTGTTAAGATTAGTCTAATGCCGACCACCTATGACACCATCATCACACGGATAAGCATAGAACCGCCTATCACACTTGCAAGCAGAGCAAGCGAAGAGAAACATCATGAAGAGATCTCGCTGAGTAGAAATAGGAATATAGAAATTGAAACCTCCCAATGCGATGAGGTGAAGGATGCAGAAGTCGTTGAGGACTATGAAGAAGAAGCTGAAAAGAGGAGCCAAGCAGAAATAATTGAAGAAGATTTGGAGGTGCTCGTCAATAAAATAAAGCATGAACAAGAAAAGGACTCGGGTGGAGGATGA

Protein sequence

MVNDKVIDWRAKVRNGAFGFEDMADVEYNVMVTSLLEKHMKVAINVPHTEGYYWLNFVKISLMPTTYDTIITRISIEPPITLANRASEEKHHEEISLSRNRNIEIETSQCDEVKDAEVVEDYEEEAEKRSQAEIIEEDLEVLVNKIKHEQEKDSVEDESEKFTEEDKLEEEFGEEEEPEKEGEHVGARVLQQPQQRREEQTMVNDKVIDWRAKVRNGAFGFEDMADVEYNVMVTSLLEKHMKVAINVPHTEGYYWLNLVKISLIPTPYDTIITRISIEPPITLASRASEEKHHEEISLSRNRNIEIETSQCDEVLINKIKHEQEKDSVEDELEKFTEEDKLEEEFGEEEEPEKEGEIALSEQSKKIRTFVRPYIGAHSKWVQEFYNNLNKEGRSKQWSMTRLLIKSQGSNGAFGFEDMADVEYNVMVTSLLEKHMKVAINVPHTEGYYWLNFVKISLMPTTYDTIITRISIEPPITLASRASEEKHHEEISLSRNRNIEIETSQCDEVKDAEVVEDYEEEAEKRSQAEIIEEDLEVLVNKIKHEQEKDSGGG

Homology

The following BLAST results are available for this feature:

BLAST of Sed0026974 vs.


Match Name	E-value	Identity	Description

BLAST of Sed0026974 vs.


Match Name	E-value	Identity	Description

BLAST of Sed0026974 vs.


Match Name	E-value	Identity	Description

BLAST of Sed0026974 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 311..338
None	No IPR available	COILS	Coil	Coil	coord: 132..165
None	No IPR available	COILS	Coil	Coil	coord: 527..547
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..201
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 326..358
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 331..355
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 158..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0026974.1	Sed0026974.1	mRNA