Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATTCATTCCAGAGCTGAAAAGAGAATTTGGTGAGTTAAAGGATGTTGGTGAGAAGCAAGAGTTGAGAGTGCGTTACCATGAAACCAAAGCCTACCACATAGCCATGGCTTACCTTATTTGGGAGAGGTTCCTAATTGCCCTTTCTACTTCGAGTTCTAACTCTTCCCTCAATTATTGCTCTCATTTGTGGATCCTTTTTGGCTTCAATCTTTCTTGTAGCCTTCTCTACATTTTGTTCTTCCTCGAGCCCGTTATCATGATGTATCGAGCTCAGAACCACTTGGACGTCATTTTCCACTCGCTCGATCGAATCTCCCATCAACTCATCACTCTTAACCAAGCTACTAACCCAGATCTTGATCTAGAGGCTCGAGATTCGGTTTCTGCACGCATCGGGTTCGATTTCAGTTTTCGCGTTCCCGCACTTGATCAGTACCATCCATATAGAATTCGTCACAGGAAACTTTATTTTGCATCCATTCTCTGTGCTCTCCTTGCTGTTACTGCTTTTCAGCTTTGTATCACCTTCAGCTATTCTCAGTGCAACTAA
mRNA sequence
ATGGAATTCATTCCAGAGCTGAAAAGAGAATTTGGTGAGTTAAAGGATGTTGGTGAGAAGCAAGAGTTGAGAGTGCGTTACCATGAAACCAAAGCCTACCACATAGCCATGGCTTACCTTATTTGGGAGAGGTTCCTAATTGCCCTTTCTACTTCGAGTTCTAACTCTTCCCTCAATTATTGCTCTCATTTGTGGATCCTTTTTGGCTTCAATCTTTCTTGTAGCCTTCTCTACATTTTGTTCTTCCTCGAGCCCGTTATCATGATGTATCGAGCTCAGAACCACTTGGACGTCATTTTCCACTCGCTCGATCGAATCTCCCATCAACTCATCACTCTTAACCAAGCTACTAACCCAGATCTTGATCTAGAGGCTCGAGATTCGGTTTCTGCACGCATCGGGTTCGATTTCAGTTTTCGCGTTCCCGCACTTGATCAGTACCATCCATATAGAATTCGTCACAGGAAACTTTATTTTGCATCCATTCTCTGTGCTCTCCTTGCTGTTACTGCTTTTCAGCTTTGTATCACCTTCAGCTATTCTCAGTGCAACTAA
Coding sequence (CDS)
ATGGAATTCATTCCAGAGCTGAAAAGAGAATTTGGTGAGTTAAAGGATGTTGGTGAGAAGCAAGAGTTGAGAGTGCGTTACCATGAAACCAAAGCCTACCACATAGCCATGGCTTACCTTATTTGGGAGAGGTTCCTAATTGCCCTTTCTACTTCGAGTTCTAACTCTTCCCTCAATTATTGCTCTCATTTGTGGATCCTTTTTGGCTTCAATCTTTCTTGTAGCCTTCTCTACATTTTGTTCTTCCTCGAGCCCGTTATCATGATGTATCGAGCTCAGAACCACTTGGACGTCATTTTCCACTCGCTCGATCGAATCTCCCATCAACTCATCACTCTTAACCAAGCTACTAACCCAGATCTTGATCTAGAGGCTCGAGATTCGGTTTCTGCACGCATCGGGTTCGATTTCAGTTTTCGCGTTCCCGCACTTGATCAGTACCATCCATATAGAATTCGTCACAGGAAACTTTATTTTGCATCCATTCTCTGTGCTCTCCTTGCTGTTACTGCTTTTCAGCTTTGTATCACCTTCAGCTATTCTCAGTGCAACTAA
Protein sequence
MEFIPELKREFGELKDVGEKQELRVRYHETKAYHIAMAYLIWERFLIALSTSSSNSSLNYCSHLWILFGFNLSCSLLYILFFLEPVIMMYRAQNHLDVIFHSLDRISHQLITLNQATNPDLDLEARDSVSARIGFDFSFRVPALDQYHPYRIRHRKLYFASILCALLAVTAFQLCITFSYSQCN
Homology
BLAST of Sed0026961 vs. NCBI nr
Match:
KAA0042578.1 (WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK05982.1 WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 133.7 bits (335), Expect = 1.7e-27
Identity = 81/174 (46.55%), Postives = 112/174 (64.37%), Query Frame = 0
Query: 6 ELKREFGELKDVGEKQELRVRYHETKAYHIAMAYLIWERFLIA--LSTSSSNSSLNYCSH 65
ELKR+F LK + EKQE RVRY+ET+A ++ +A LIW R + SSS S LN H
Sbjct: 7 ELKRKFDRLKPLAEKQEQRVRYYETRAQNVTIACLIWYRLFVVGMYHISSSLSLLNCTHH 66
Query: 66 LWILFGFNLSCSLLYILFFLEPVIMMYRAQNHLDVIFHSLDRISHQLITLNQATNPDLDL 125
LW++ GF+L+ + LY+LFFLE V M+YRAQN LD+I+ + IS Q++ NPD D
Sbjct: 67 LWMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDIIYKQQNEISQQILNTG---NPD-DY 126
Query: 126 EARDSVSARIGF-DFSFRVPALDQYHP--YRIRHRKLYFASILCALLAVTAFQL 175
E DS+S+ G+ + SF V L +YH + + RK+Y AS + LLAV AF++
Sbjct: 127 EGGDSISSDNGWLELSFEVQLLHEYHRPLFTLVQRKVYIASTISTLLAVAAFEV 176
BLAST of Sed0026961 vs. NCBI nr
Match:
ADN33782.1 (hypothetical protein [Cucumis melo subsp. melo])
HSP 1 Score: 132.5 bits (332), Expect = 3.7e-27
Identity = 83/172 (48.26%), Postives = 111/172 (64.53%), Query Frame = 0
Query: 6 ELKREFGELKDVGEKQELRVRYHETKAYHIAMAYLIWERFLIA--LSTSSSNSSLNYCSH 65
ELKR F LK + EKQE RVRY+ET+A ++A+A LIW+R + TSSS S LN H
Sbjct: 7 ELKRNFDGLKLLAEKQEQRVRYYETRAQNVAIACLIWDRLFVVGMYHTSSSLSLLNCTPH 66
Query: 66 LWILFGFNLSCSLLYILFFLEPVIMMYRAQNHLDVIFHSLDRISHQLITLNQATNPDLDL 125
LW++ GF+L+ + LY+LFFLE V M+YRAQN LD+I IS Q++ T D
Sbjct: 67 LWMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDIISKKQIEISLQILN----TGSPNDD 126
Query: 126 EARDSVSA-RIGFDFSFRVPALDQYHPYRIRHRKLYFASILCALLAVTAFQL 175
EA D+ S+ G + SF+V L QYHP + RK+Y AS + LLAV+AF++
Sbjct: 127 EAGDTFSSDNGGLELSFQVQLL-QYHPLTVVQRKIYIASTISTLLAVSAFEV 173
BLAST of Sed0026961 vs. NCBI nr
Match:
KAA0042580.1 (WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK05984.1 WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 130.2 bits (326), Expect = 1.9e-26
Identity = 82/171 (47.95%), Postives = 109/171 (63.74%), Query Frame = 0
Query: 7 LKREFGELKDVGEKQELRVRYHETKAYHIAMAYLIWERFLIA--LSTSSSNSSLNYCSHL 66
LKR F LK + EKQE RVRY+ET+A ++A+A LIW+R + TSSS S LN HL
Sbjct: 8 LKRNFDGLKLLAEKQEQRVRYYETRAQNVAIACLIWDRLFVVGMYHTSSSLSLLNCTPHL 67
Query: 67 WILFGFNLSCSLLYILFFLEPVIMMYRAQNHLDVIFHSLDRISHQLITLNQATNPDLDLE 126
W++ GF+L+ + LY+LFFLE V M+YRAQN LD+I IS Q++ T D E
Sbjct: 68 WMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDIISKRQIEISLQILN----TGSPNDDE 127
Query: 127 ARDSVSA-RIGFDFSFRVPALDQYHPYRIRHRKLYFASILCALLAVTAFQL 175
A D+ S+ G + SF+V L QYHP + RK+Y AS + LLAV AF++
Sbjct: 128 AGDTFSSDNGGLELSFQVQLL-QYHPLTVVQRKIYIASTISTLLAVAAFEV 173
BLAST of Sed0026961 vs. NCBI nr
Match:
XP_022157130.1 (uncharacterized protein LOC111023927 [Momordica charantia])
HSP 1 Score: 130.2 bits (326), Expect = 1.9e-26
Identity = 83/175 (47.43%), Postives = 110/175 (62.86%), Query Frame = 0
Query: 1 MEFIPELKREFGELKDVGEKQELRVRYHETKAYHIAMAYLIWERFLIALSTSSSNSSLNY 60
MEF ELKR F LKD+ EKQE RV+YHE++A +I MAYLIW R L + S ++SSL
Sbjct: 1 MEF-GELKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGR-LFFFAISQTSSSLLK 60
Query: 61 CSHLWILFGFNLSCSLLYILFFLEPVIMMYRAQNHLDVIFHSLDRISHQ-LITLNQATNP 120
C W++ G ++SC+ +Y LFFLE V M+YR Q+ +D+I I Q L+ +Q +
Sbjct: 61 CIDWWMVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQLDDV 120
Query: 121 DLDLEARDSVSARIGFDFSFRVPALDQYHPYRIRHRKLYFASILCALLAVTAFQL 175
DL +EA DS GF FSF V L +Y +RI RK Y + + ALLAVTA +L
Sbjct: 121 DLAMEAGDSSD---GFQFSFHVKLL-EYGAFRIVERKFYICATVSALLAVTAIEL 169
BLAST of Sed0026961 vs. NCBI nr
Match:
XP_022157182.1 (uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncharacterized protein LOC111023958 [Momordica charantia])
HSP 1 Score: 111.3 bits (277), Expect = 8.9e-21
Identity = 72/179 (40.22%), Postives = 101/179 (56.42%), Query Frame = 0
Query: 6 ELKREFGELKDVGEKQELRVRYHETKAYHIAMAYLIWERFLIALSTSSSNSSLNYCSHLW 65
EL+R+F ELKD+ EKQE RVRY+ETK +I YLI+ R L S ++SS N C W
Sbjct: 5 ELERKFEELKDINEKQESRVRYYETKVQNIVFGYLIFTR-LFFFGISQTSSSFN-CKDWW 64
Query: 66 ILFGFNLSCSLLYILFFLEPVIMMYRAQNHLDVIFHSLDRISHQLITLNQATNPDLDLEA 125
++ +L CS +Y L FL+ V M++R Q LD+I L + Q++ + L +E
Sbjct: 65 VILALSLLCSFIYFLLFLDAVAMLFRTQYQLDIICKELKELFQQILVSKNQDDVGLSMET 124
Query: 126 RDSVSARIGFDFSFRVPALDQYHPYRIRHRKLYFASILCALLAVTAFQLCITFSYSQCN 185
+S GF+F F L H +RI RK+Y + ALLAVTA +L ++ Y CN
Sbjct: 125 GESSG---GFEFGFHEKMLMLDH-FRIVGRKVYIYFTVSALLAVTAIELYVS-KYVLCN 176
BLAST of Sed0026961 vs. ExPASy TrEMBL
Match:
A0A5D3C430 (WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00780 PE=4 SV=1)
HSP 1 Score: 133.7 bits (335), Expect = 8.1e-28
Identity = 81/174 (46.55%), Postives = 112/174 (64.37%), Query Frame = 0
Query: 6 ELKREFGELKDVGEKQELRVRYHETKAYHIAMAYLIWERFLIA--LSTSSSNSSLNYCSH 65
ELKR+F LK + EKQE RVRY+ET+A ++ +A LIW R + SSS S LN H
Sbjct: 7 ELKRKFDRLKPLAEKQEQRVRYYETRAQNVTIACLIWYRLFVVGMYHISSSLSLLNCTHH 66
Query: 66 LWILFGFNLSCSLLYILFFLEPVIMMYRAQNHLDVIFHSLDRISHQLITLNQATNPDLDL 125
LW++ GF+L+ + LY+LFFLE V M+YRAQN LD+I+ + IS Q++ NPD D
Sbjct: 67 LWMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDIIYKQQNEISQQILNTG---NPD-DY 126
Query: 126 EARDSVSARIGF-DFSFRVPALDQYHP--YRIRHRKLYFASILCALLAVTAFQL 175
E DS+S+ G+ + SF V L +YH + + RK+Y AS + LLAV AF++
Sbjct: 127 EGGDSISSDNGWLELSFEVQLLHEYHRPLFTLVQRKVYIASTISTLLAVAAFEV 176
BLAST of Sed0026961 vs. ExPASy TrEMBL
Match:
A0A0A0KM15 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139820 PE=4 SV=1)
HSP 1 Score: 133.7 bits (335), Expect = 8.1e-28
Identity = 89/177 (50.28%), Postives = 115/177 (64.97%), Query Frame = 0
Query: 1 MEFIPELKREFGELKDVGEKQELRVRYHETKAYHIAMAYLIWER--FLIALSTSSSNSSL 60
MEF ELKR+F LK + EKQE RVRY+ET+A ++A+A LIW+R F+ TSSS S L
Sbjct: 3 MEF-GELKRKFDGLKFLAEKQEQRVRYYETRAQNLAIASLIWDRLFFVGMYHTSSSLSLL 62
Query: 61 NYCSHLWILFGFNLSCSLLYILFFLEPVIMMYRAQNHLDVIFHSLDRISHQLITLNQATN 120
N HLW++F F LS + LY LFFLE V M+YRAQN LD+I IS Q++ T
Sbjct: 63 NCTHHLWMVFSFILSSTSLYFLFFLEAVFMLYRAQNQLDIISKKQIEISLQILN----TG 122
Query: 121 PDLDLEARDSVSARIGF-DFSFRVPALDQYHPYRIRHRKLYFASILCALLAVTAFQL 175
D EA DS+S+ G+ + SF+V L YHP+ + RK+Y AS + LLAV AF+L
Sbjct: 123 SPNDDEAGDSISSDNGWLELSFQVQLL-PYHPFTLVQRKVYIASTIFTLLAVAAFEL 173
BLAST of Sed0026961 vs. ExPASy TrEMBL
Match:
E5GBE1 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)
HSP 1 Score: 132.5 bits (332), Expect = 1.8e-27
Identity = 83/172 (48.26%), Postives = 111/172 (64.53%), Query Frame = 0
Query: 6 ELKREFGELKDVGEKQELRVRYHETKAYHIAMAYLIWERFLIA--LSTSSSNSSLNYCSH 65
ELKR F LK + EKQE RVRY+ET+A ++A+A LIW+R + TSSS S LN H
Sbjct: 7 ELKRNFDGLKLLAEKQEQRVRYYETRAQNVAIACLIWDRLFVVGMYHTSSSLSLLNCTPH 66
Query: 66 LWILFGFNLSCSLLYILFFLEPVIMMYRAQNHLDVIFHSLDRISHQLITLNQATNPDLDL 125
LW++ GF+L+ + LY+LFFLE V M+YRAQN LD+I IS Q++ T D
Sbjct: 67 LWMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDIISKKQIEISLQILN----TGSPNDD 126
Query: 126 EARDSVSA-RIGFDFSFRVPALDQYHPYRIRHRKLYFASILCALLAVTAFQL 175
EA D+ S+ G + SF+V L QYHP + RK+Y AS + LLAV+AF++
Sbjct: 127 EAGDTFSSDNGGLELSFQVQLL-QYHPLTVVQRKIYIASTISTLLAVSAFEV 173
BLAST of Sed0026961 vs. ExPASy TrEMBL
Match:
A0A5A7TGW8 (WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00800 PE=4 SV=1)
HSP 1 Score: 130.2 bits (326), Expect = 9.0e-27
Identity = 82/171 (47.95%), Postives = 109/171 (63.74%), Query Frame = 0
Query: 7 LKREFGELKDVGEKQELRVRYHETKAYHIAMAYLIWERFLIA--LSTSSSNSSLNYCSHL 66
LKR F LK + EKQE RVRY+ET+A ++A+A LIW+R + TSSS S LN HL
Sbjct: 8 LKRNFDGLKLLAEKQEQRVRYYETRAQNVAIACLIWDRLFVVGMYHTSSSLSLLNCTPHL 67
Query: 67 WILFGFNLSCSLLYILFFLEPVIMMYRAQNHLDVIFHSLDRISHQLITLNQATNPDLDLE 126
W++ GF+L+ + LY+LFFLE V M+YRAQN LD+I IS Q++ T D E
Sbjct: 68 WMVLGFSLASTSLYLLFFLEAVFMLYRAQNQLDIISKRQIEISLQILN----TGSPNDDE 127
Query: 127 ARDSVSA-RIGFDFSFRVPALDQYHPYRIRHRKLYFASILCALLAVTAFQL 175
A D+ S+ G + SF+V L QYHP + RK+Y AS + LLAV AF++
Sbjct: 128 AGDTFSSDNGGLELSFQVQLL-QYHPLTVVQRKIYIASTISTLLAVAAFEV 173
BLAST of Sed0026961 vs. ExPASy TrEMBL
Match:
A0A6J1DS87 (uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023927 PE=4 SV=1)
HSP 1 Score: 130.2 bits (326), Expect = 9.0e-27
Identity = 83/175 (47.43%), Postives = 110/175 (62.86%), Query Frame = 0
Query: 1 MEFIPELKREFGELKDVGEKQELRVRYHETKAYHIAMAYLIWERFLIALSTSSSNSSLNY 60
MEF ELKR F LKD+ EKQE RV+YHE++A +I MAYLIW R L + S ++SSL
Sbjct: 1 MEF-GELKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGR-LFFFAISQTSSSLLK 60
Query: 61 CSHLWILFGFNLSCSLLYILFFLEPVIMMYRAQNHLDVIFHSLDRISHQ-LITLNQATNP 120
C W++ G ++SC+ +Y LFFLE V M+YR Q+ +D+I I Q L+ +Q +
Sbjct: 61 CIDWWMVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQLDDV 120
Query: 121 DLDLEARDSVSARIGFDFSFRVPALDQYHPYRIRHRKLYFASILCALLAVTAFQL 175
DL +EA DS GF FSF V L +Y +RI RK Y + + ALLAVTA +L
Sbjct: 121 DLAMEAGDSSD---GFQFSFHVKLL-EYGAFRIVERKFYICATVSALLAVTAIEL 169
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0042578.1 | 1.7e-27 | 46.55 | WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK0598... | [more] |
ADN33782.1 | 3.7e-27 | 48.26 | hypothetical protein [Cucumis melo subsp. melo] | [more] |
KAA0042580.1 | 1.9e-26 | 47.95 | WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK0598... | [more] |
XP_022157130.1 | 1.9e-26 | 47.43 | uncharacterized protein LOC111023927 [Momordica charantia] | [more] |
XP_022157182.1 | 8.9e-21 | 40.22 | uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncha... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3C430 | 8.1e-28 | 46.55 | WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194... | [more] |
A0A0A0KM15 | 8.1e-28 | 50.28 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139820 PE=4 SV=1 | [more] |
E5GBE1 | 1.8e-27 | 48.26 | Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1 | [more] |
A0A5A7TGW8 | 9.0e-27 | 47.95 | WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194... | [more] |
A0A6J1DS87 | 9.0e-27 | 47.43 | uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
Match Name | E-value | Identity | Description | |