Sed0026922 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGCCACAATGATGACTTCCATCCCTCAGTTTAATGGGCTGAGTCCCACCGTTTCAGTAGCTCCGGTTCGCAGCCTGGTAAGTCGCCGTCGCCGCCGTAGCCACTGGCTTTGTTATTCTTTATGATCGGAAACAGCTGAATTTGTTTGATTTTCAGGTGGCGGTGCAACCACTGAGGCGGAGGGGCGGCGGCGGCGCTCTCCATGTCCGCTGTGGTGATTTCATTGGCTCTTCCACCAATGTGGTAATCATCTTTTCAACTACCTTTTTACTCATCATTTAAGTTTTTTTTTTAAATTTTTAATTCCAATGTATTTTTTTGCTTTTTAAATTTGAGAAAGTAGACTAGAAAGACAAAATGATCGGATTTATTGTGCTGTGATTTTATGTATGATTATTAGTTTATGATGTGGATATGATACTAAAATTGAAGATGAACAATTGAGTTTTTTTTTTCTTTTAAATAAATATTCAACAATATTTAGAGTTGGGATTATAAAGAATTGAAGTATGTATAAGTCTATTTAACTTAATTAAATTGTTGGTCGTGACTTGATTTTTTTTTTGTTGTTGGGAAAGCAAATAAAATAGAAAGAAATTAATGAGATGCGAACACGTGGCTAAAAAAAACAGATAATGGTGATATCAACGAGCCTGATGCTATTCGCTGGACGGTTCGGATTGGCTCCATCGGCAAACAGGAAATCAACGGCTGGGCTGAAGCTGGAGGCGAGGGATTCCGGGTTACAGACGGGTGACCCGGCGGGTTTCACCCTGGCCGACACTTTGGCTTGCGGCACTGTCGGCCACATCATTGGCGTTGGTGTCGTTCTTGGCCTTAAAGGCATTGGCTCACTCTAA ATGGCGGCCACAATGATGACTTCCATCCCTCAGTTTAATGGGCTGAGTCCCACCGTTTCAGTAGCTCCGGTTCGCAGCCTGGTGGCGGTGCAACCACTGAGGCGGAGGGGCGGCGGCGGCGCTCTCCATGTCCGCTGTGGTGATTTCATTGGCTCTTCCACCAATGTGATAATGGTGATATCAACGAGCCTGATGCTATTCGCTGGACGGTTCGGATTGGCTCCATCGGCAAACAGGAAATCAACGGCTGGGCTGAAGCTGGAGGCGAGGGATTCCGGGTTACAGACGGGTGACCCGGCGGGTTTCACCCTGGCCGACACTTTGGCTTGCGGCACTGTCGGCCACATCATTGGCGTTGGTGTCGTTCTTGGCCTTAAAGGCATTGGCTCACTCTAA ATGGCGGCCACAATGATGACTTCCATCCCTCAGTTTAATGGGCTGAGTCCCACCGTTTCAGTAGCTCCGGTTCGCAGCCTGGTGGCGGTGCAACCACTGAGGCGGAGGGGCGGCGGCGGCGCTCTCCATGTCCGCTGTGGTGATTTCATTGGCTCTTCCACCAATGTGATAATGGTGATATCAACGAGCCTGATGCTATTCGCTGGACGGTTCGGATTGGCTCCATCGGCAAACAGGAAATCAACGGCTGGGCTGAAGCTGGAGGCGAGGGATTCCGGGTTACAGACGGGTGACCCGGCGGGTTTCACCCTGGCCGACACTTTGGCTTGCGGCACTGTCGGCCACATCATTGGCGTTGGTGTCGTTCTTGGCCTTAAAGGCATTGGCTCACTCTAA MAATMMTSIPQFNGLSPTVSVAPVRSLVAVQPLRRRGGGGALHVRCGDFIGSSTNVIMVISTSLMLFAGRFGLAPSANRKSTAGLKLEARDSGLQTGDPAGFTLADTLACGTVGHIIGVGVVLGLKGIGSL Homology
BLAST of Sed0026922 vs. NCBI nr
Match: XP_008439573.1 (PREDICTED: photosystem I reaction center subunit psaK, chloroplastic [Cucumis melo] >KAA0052503.1 photosystem I reaction center subunit psaK [Cucumis melo var. makuwa] >TYK13321.1 photosystem I reaction center subunit psaK [Cucumis melo var. makuwa]) HSP 1 Score: 228.0 bits (580), Expect = 4.6e-56 Identity = 120/131 (91.60%), Postives = 124/131 (94.66%), Query Frame = 0
BLAST of Sed0026922 vs. NCBI nr
Match: XP_038883621.1 (photosystem I reaction center subunit psaK, chloroplastic [Benincasa hispida]) HSP 1 Score: 227.3 bits (578), Expect = 7.9e-56 Identity = 120/131 (91.60%), Postives = 124/131 (94.66%), Query Frame = 0
BLAST of Sed0026922 vs. NCBI nr
Match: KAG7034753.1 (Photosystem I reaction center subunit psaK, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 226.5 bits (576), Expect = 1.4e-55 Identity = 120/131 (91.60%), Postives = 124/131 (94.66%), Query Frame = 0
BLAST of Sed0026922 vs. NCBI nr
Match: XP_023543618.1 (photosystem I reaction center subunit psaK, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 226.1 bits (575), Expect = 1.8e-55 Identity = 120/131 (91.60%), Postives = 123/131 (93.89%), Query Frame = 0
BLAST of Sed0026922 vs. NCBI nr
Match: KAG6581462.1 (ABC transporter C family member 12, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 226.1 bits (575), Expect = 1.8e-55 Identity = 120/130 (92.31%), Postives = 123/130 (94.62%), Query Frame = 0
BLAST of Sed0026922 vs. ExPASy Swiss-Prot
Match: Q9SUI5 (Photosystem I reaction center subunit psaK, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSAK PE=2 SV=2) HSP 1 Score: 196.1 bits (497), Expect = 2.6e-49 Identity = 104/132 (78.79%), Postives = 119/132 (90.15%), Query Frame = 0
BLAST of Sed0026922 vs. ExPASy Swiss-Prot
Match: Q9ZT05 (Photosystem I reaction center subunit psaK, chloroplastic OS=Medicago sativa OX=3879 GN=PSAK PE=2 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 1.7e-48 Identity = 100/126 (79.37%), Postives = 111/126 (88.10%), Query Frame = 0
BLAST of Sed0026922 vs. ExPASy Swiss-Prot
Match: P36886 (Photosystem I reaction center subunit psaK, chloroplastic OS=Hordeum vulgare OX=4513 GN=PSAK PE=1 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 7.0e-39 Identity = 88/126 (69.84%), Postives = 103/126 (81.75%), Query Frame = 0
BLAST of Sed0026922 vs. ExPASy Swiss-Prot
Match: P14225 (Photosystem I reaction center subunit psaK, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=PSAK PE=1 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 3.3e-20 Identity = 53/90 (58.89%), Postives = 65/90 (72.22%), Query Frame = 0
BLAST of Sed0026922 vs. ExPASy Swiss-Prot
Match: P42051 (Photosystem I reaction center subunit psaK, chloroplastic (Fragment) OS=Cucumis sativus OX=3659 GN=PSAK PE=1 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 9.9e-09 Identity = 30/32 (93.75%), Postives = 31/32 (96.88%), Query Frame = 0
BLAST of Sed0026922 vs. ExPASy TrEMBL
Match: A0A5A7U9C9 (PSI-K OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009450 PE=3 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 2.2e-56 Identity = 120/131 (91.60%), Postives = 124/131 (94.66%), Query Frame = 0
BLAST of Sed0026922 vs. ExPASy TrEMBL
Match: A0A1S3AZR1 (PSI-K OS=Cucumis melo OX=3656 GN=LOC103484327 PE=3 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 2.2e-56 Identity = 120/131 (91.60%), Postives = 124/131 (94.66%), Query Frame = 0
BLAST of Sed0026922 vs. ExPASy TrEMBL
Match: A0A6J1CZY3 (PSI-K OS=Momordica charantia OX=3673 GN=LOC111015785 PE=3 SV=1) HSP 1 Score: 225.3 bits (573), Expect = 1.5e-55 Identity = 119/131 (90.84%), Postives = 123/131 (93.89%), Query Frame = 0
BLAST of Sed0026922 vs. ExPASy TrEMBL
Match: A0A6J1IQ95 (PSI-K OS=Cucurbita maxima OX=3661 GN=LOC111477837 PE=3 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 2.5e-55 Identity = 119/131 (90.84%), Postives = 123/131 (93.89%), Query Frame = 0
BLAST of Sed0026922 vs. ExPASy TrEMBL
Match: A0A6J1EJV0 (PSI-K OS=Cucurbita moschata OX=3662 GN=LOC111433263 PE=3 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 4.2e-55 Identity = 119/131 (90.84%), Postives = 122/131 (93.13%), Query Frame = 0
BLAST of Sed0026922 vs. TAIR 10
Match: AT1G30380.1 (photosystem I subunit K ) HSP 1 Score: 196.1 bits (497), Expect = 1.8e-50 Identity = 104/132 (78.79%), Postives = 119/132 (90.15%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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