Sed0026912 (gene) Chayote v1

Overview


Name	Sed0026912
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Tryptophan synthase
Location	LG03: 1809157 .. 1812331 (+)
RNA-Seq Expression	Sed0026912
Synteny	Sed0026912

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCTCAATTCCTTGCTGTTGGGCCCTCAGCTTCTTCAGGCATCAATGGCATGGGTACTTGATTTCTCCTCTCTTTTTTTCCTGTATTTTTGTTGCTGTTAAATGAACATGTAAATCAATTGAAGCTAAAAAAAACCCTTTTTCATTTTACTACTTGTGATTGTTGATCATGTTCCTTTTTGTGTTTTTGATCTATGGTTGTTAAATGAGTTTTTACCTTCAAAATCTTTATCTTGAGCTAACATTTGGAGATGAAACTGCAGAAACTTGGGGGATTCTTTATTTGGACATATAACCCAGTAGTTTTTTTCTTTATAATTTGTGAGATGTGATCATTTCATTGATGAGTAGTATAGACTTGAACTCAGACTGCCTATCTTGTTAGTCTTAGTTTAGATTGGGTTGAGTTTAACTGAGCAAAAAAATGGTCAGCCCAAAAACCGACCCAATCCAAAGAAAATTATAAAGTTATAACCCAATCTAACTGTTGAATTATGTTAAATCACTAATCAATCCAAAAGGTTTAACTGATGAGTTGGAGTAAATTTAATTATATCAACCAATACCCCCTTCACTTGTGGGCTTTGAAATACCCTACAAATGGAATTCAATTTTAATGGAGAATAAAATGACTTGGCAGGGGCTCGAACTCAAGATTTCTTGCTTTGATAGAATGTTAAATTATGTTAAATCACCGATCAACCCAAAAAGGTTAAACTAATGGGTTGAGATAAATTTAATGATATCAACCAACACCAACGTAAAAAAAATTATAACTCAACCCAACCCAACCATTATGGTTTGGTTTCGGTAACATGGGTTGCTGGTTTTTTTTTGTACATTCCTAGTATATTTATGCTTTGTTGCTTGAACTGTTGGTTCTTGTAGAAGTTTTTTTGTTGGTTTTAATCAGACATGTGATGATACTGGATCACTTTTGCCTTTTTAAAGTCTCTTTGGAAGTCAATTGCATTTTTCTGTTTTTGGTTTCCCAACTTAATAGGAGTTGGAAATGGAGTGATAATTTGCTCATAGACATTAAGCTTATTTAGAACCTATCTATTTCCCCTTATCTTTGATCATTCAAACTTTTTCACCTCAGTTGGGGAACAACTGCCTGGATGTCTTTCACTTAAGAGAAATCCCAGACATTTGAGGTTCTCAAATGGTTTTATAACAAAAGCTGCATTAAATCCTAGTTTAAGGGCGGTCAAGATCCCGCGTCAATGGTACAATCTGGTTGCAGATCTTCCCGTTCAACCGCCTCCTCGATTGCATCCCAAAACTTTGGAGCCAATCACACCTGAAGATTTGTCCCCTCTCTATTGTGATGAATTGATTAAGCAGGAGGGCAAGTACTCATTGCTTCATAAACATCCCGGACGAAGTTGTCGATATCTACGGGCTTTGGCGCCCAACTCCTATCATTAGGTAATTTGTAGTATGTCTTTTTGAAATATATGCAGGTTTGTTTACAACAATGTTTACTGTCATGGCATATCCTAAATCATTTCCTTGTTGATCTTTTTTCTTACTTGCATCCTTTCATTACTCTAAAGCGTGTAATAGTGTTTTTCGACATATGTTAGAGCCAAGAGGTTAGAGAAGCTTCTTGACACACCGGCCCGAATTTACTACAAGTATGAAGGAGTTAGCCCTGCTGGGTCGCATAAAGCCAACTCTGCTGTTCCACAAACTTGGTATAATGTACAGGAAGGTGTCGAGAATATTGTTACAGAAACTGGGGCTGATCAATGGGGAAGTGCTTTGGCCTTTGCTTGTAGCTTATTCAATCTCGGCTGCGAGGTAAGAAGCAATAGTTGTGGTGTTCAACTATTGAGTTAAGATGCTGAAGAATTGGTCAAAACTTAACTTGTTGGTTGCTTCTGTAACATATCACATGAAATGTATCTTTGGTTCTTTACATAGGTGTGGCAAGTACGTGCGTCTTATGATCAAAAACCGTATCGACGACTGATGATGCAAACTTGGGGAACAAAAGTACATCCATCTCCATCCGATCTCACTCGTGCAGGTAGGAAGTTGCTTCAAGTTGACCCATCAAGCCCGGGAAGTTTAGGAATTGCCATTTCAGAAGCTGTGGAAGTTGCAACTCAAAATGCTGATACCAAGTAATGTGTGGGAAGTGTTCTCAACCATGTTTTGCTTCACCAAACCGTCATCGGTGAAGAGTATCGAACAAATGAAAGCCTTAGGTGAGAATCCGGATGTCATCATAGGATGCACTGGAGGAGGATCGAATTTTGCAGGCCTTAGATTTCCGTTCCTCCGCTAGAAACTTGCTGGGAAAGTAAGCCCTGTTATTAGAGCAGTTGAACCTGAAGCTTGTCCTTCATTAACAAAAGGAGTTTATGCTTATGATTATGGCGATATAGCCGGGACGACTCCGTTGATGAAGATGCACACACTTGGTCACAACTTCATTCCCGACCCAATTCACGTCGGTAATGTATAATACGCTACGGAAACTAATATAACGCATATGCTATCGAAACCAATATTTTATGTTACACTGCACTTCTTGACCTTTTAACTTTATATAAACATTGGATTAGAATATATAATGTCAGTATGCTTTCTCTTACGCTTCGCACCTGTAATAGAAACTAGGAGAAATAAAGAAGAAAACTCTATCAAGCAGCATTCTTTTAAAACATCAAACTCTTTCTTACTGTCGACCATCATCTTAGCTTACTTCCTTTTCGCAGGCGGATTACGGTATCATGGTATCGCCCCATTGATCTCACATGTCTATAATCTTGGTCTATTGGAAGCTATATCACTTCCCCAAACAGAATGCTTTCGAGGTACCATTACGTAACCGAAAGTTAACTGATTGGTGCTTTGGAGAACAAACCAGTTACTTGTATATTGGCTCTGCATAGTTGGCCACCAATGCAGCAACTGAATTCCTCTTTGTTTGCAGGTGCCATACAATTTGCTAGAACTGAAGGAATAATACCTGCACCCGAGCCAACTCACGCCATAGCTGCAACTATTCGAGAGGCTCTTCACTGTCGAGAAACCGGAGAACCGAAAGTTATTCTCACAGCCATGTGTGGGCACGGTCACTTCAACCTACCAGCTTATGAGAAGTACCTGCAAGGAGAGATGACAGATCTTACTTTTGCAGATGAAAAGATACAATAA

mRNA sequence

ATGGCTGCTCAATTCCTTGCTGTTGGGCCCTCAGCTTCTTCAGGCATCAATGGCATGGTTGGGGAACAACTGCCTGGATGTCTTTCACTTAAGAGAAATCCCAGACATTTGAGGTTCTCAAATGGTTTTATAACAAAAGCTGCATTAAATCCTAGTTTAAGGGCGGTCAAGATCCCGCGTCAATGGTACAATCTGGTTGCAGATCTTCCCGTTCAACCGCCTCCTCGATTGCATCCCAAAACTTTGGAGCCAATCACACCTGAAGATTTCAGGAGGGCAAGTACTCATTGCTTCATAAACATCCCGGACGAAGTTGTCGATATCTACGGGCTTTGGCGCCCAACTCCTATCATTAGAGCCAAGAGGTTAGAGAAGCTTCTTGACACACCGGCCCGAATTTACTACAAGTATGAAGGAGTTAGCCCTGCTGGGTCGCATAAAGCCAACTCTGCTGTTCCACAAACTTGGTATAATGTACAGGAAGGTGTCGAGAATATTGTTACAGAAACTGGGGCTGATCAATGGGGAAGTGCTTTGGCCTTTGCTTGTAGCTTATTCAATCTCGGCTGCGAGGTGTGGCAAGTACGTGCGTCTTATGATCAAAAACCGTATCGACGACTGATGATGCAAACTTGGGGAACAAAAGTACATCCATCTCCATCCGATCTCACTCGTGCAGGTAGGAAGTTGCTTCAAGTTGACCCATCAAGCCCGGGAAGTTTAGGAATTGCCATTTCAGAAGCTGTGGAAGTTGCAACTCAAAATGCTGATACCAATATCGAACAAATGAAAGCCTTAGGTGAGAATCCGGATGTCATCATAGGATGCACTGGAGGAGGATCGAATTTTGCAGGCCTTAGATTTCCCCCTGTTATTAGAGCAGTTGAACCTGAAGCTTGTCCTTCATTAACAAAAGGAGTTTATGCTTATGATTATGGCGATATAGCCGGGACGACTCCGTTGATGAAGATGCACACACTTGGTCACAACTTCATTCCCGACCCAATTCACGTCGGCGGATTACGGTATCATGGTATCGCCCCATTGATCTCACATGTCTATAATCTTGGTCTATTGGAAGCTATATCACTTCCCCAAACAGAATGCTTTCGAGGTGCCATACAATTTGCTAGAACTGAAGGAATAATACCTGCACCCGAGCCAACTCACGCCATAGCTGCAACTATTCGAGAGGCTCTTCACTGTCGAGAAACCGGAGAACCGAAAGTTATTCTCACAGCCATGTGTGGGCACGGTCACTTCAACCTACCAGCTTATGAGAAGTACCTGCAAGGAGAGATGACAGATCTTACTTTTGCAGATGAAAAGATACAATAA

Coding sequence (CDS)

ATGGCTGCTCAATTCCTTGCTGTTGGGCCCTCAGCTTCTTCAGGCATCAATGGCATGGTTGGGGAACAACTGCCTGGATGTCTTTCACTTAAGAGAAATCCCAGACATTTGAGGTTCTCAAATGGTTTTATAACAAAAGCTGCATTAAATCCTAGTTTAAGGGCGGTCAAGATCCCGCGTCAATGGTACAATCTGGTTGCAGATCTTCCCGTTCAACCGCCTCCTCGATTGCATCCCAAAACTTTGGAGCCAATCACACCTGAAGATTTCAGGAGGGCAAGTACTCATTGCTTCATAAACATCCCGGACGAAGTTGTCGATATCTACGGGCTTTGGCGCCCAACTCCTATCATTAGAGCCAAGAGGTTAGAGAAGCTTCTTGACACACCGGCCCGAATTTACTACAAGTATGAAGGAGTTAGCCCTGCTGGGTCGCATAAAGCCAACTCTGCTGTTCCACAAACTTGGTATAATGTACAGGAAGGTGTCGAGAATATTGTTACAGAAACTGGGGCTGATCAATGGGGAAGTGCTTTGGCCTTTGCTTGTAGCTTATTCAATCTCGGCTGCGAGGTGTGGCAAGTACGTGCGTCTTATGATCAAAAACCGTATCGACGACTGATGATGCAAACTTGGGGAACAAAAGTACATCCATCTCCATCCGATCTCACTCGTGCAGGTAGGAAGTTGCTTCAAGTTGACCCATCAAGCCCGGGAAGTTTAGGAATTGCCATTTCAGAAGCTGTGGAAGTTGCAACTCAAAATGCTGATACCAATATCGAACAAATGAAAGCCTTAGGTGAGAATCCGGATGTCATCATAGGATGCACTGGAGGAGGATCGAATTTTGCAGGCCTTAGATTTCCCCCTGTTATTAGAGCAGTTGAACCTGAAGCTTGTCCTTCATTAACAAAAGGAGTTTATGCTTATGATTATGGCGATATAGCCGGGACGACTCCGTTGATGAAGATGCACACACTTGGTCACAACTTCATTCCCGACCCAATTCACGTCGGCGGATTACGGTATCATGGTATCGCCCCATTGATCTCACATGTCTATAATCTTGGTCTATTGGAAGCTATATCACTTCCCCAAACAGAATGCTTTCGAGGTGCCATACAATTTGCTAGAACTGAAGGAATAATACCTGCACCCGAGCCAACTCACGCCATAGCTGCAACTATTCGAGAGGCTCTTCACTGTCGAGAAACCGGAGAACCGAAAGTTATTCTCACAGCCATGTGTGGGCACGGTCACTTCAACCTACCAGCTTATGAGAAGTACCTGCAAGGAGAGATGACAGATCTTACTTTTGCAGATGAAAAGATACAATAA

Protein sequence

MAAQFLAVGPSASSGINGMVGEQLPGCLSLKRNPRHLRFSNGFITKAALNPSLRAVKIPRQWYNLVADLPVQPPPRLHPKTLEPITPEDFRRASTHCFINIPDEVVDIYGLWRPTPIIRAKRLEKLLDTPARIYYKYEGVSPAGSHKANSAVPQTWYNVQEGVENIVTETGADQWGSALAFACSLFNLGCEVWQVRASYDQKPYRRLMMQTWGTKVHPSPSDLTRAGRKLLQVDPSSPGSLGIAISEAVEVATQNADTNIEQMKALGENPDVIIGCTGGGSNFAGLRFPPVIRAVEPEACPSLTKGVYAYDYGDIAGTTPLMKMHTLGHNFIPDPIHVGGLRYHGIAPLISHVYNLGLLEAISLPQTECFRGAIQFARTEGIIPAPEPTHAIAATIREALHCRETGEPKVILTAMCGHGHFNLPAYEKYLQGEMTDLTFADEKIQ

Homology

[Close]

BLAST of Sed0026912 vs. NCBI nr
Match: XP_038890851.1 (tryptophan synthase beta chain 2 [Benincasa hispida])

HSP 1 Score: 762.7 bits (1968), Expect = 1.8e-216
Identity = 379/488 (77.66%), Postives = 409/488 (83.81%), Query Frame = 0


Query: 1   MAAQFLAVGPSASSGI-NGMVGEQLPGCLSLKRNPRHLRFSNGFITKAALNPSLRAVKIP 60
           MAA FLAVG   SSGI NG VGEQL G LSLKR PRHLRFSNG+ TKAA NP+L+AV++P
Sbjct: 1   MAATFLAVGSLTSSGINNGRVGEQLSGYLSLKRVPRHLRFSNGYRTKAASNPNLKAVEVP 60

Query: 61  RQWYNLVADLPVQPPPRLHPKTLEPITPEDF----------RRASTHCFINIPDEVVDIY 120
           RQWYNLVADLPV+PPP LHPKTLEPI PED           + AST  +INIPDEVVDIY
Sbjct: 61  RQWYNLVADLPVKPPPPLHPKTLEPIKPEDLSHLFPDELIKQEASTDQYINIPDEVVDIY 120

Query: 121 GLWRPTPIIRAKRLEKLLDTPARIYYKYEGVSPAGSHKANSAVPQTWYNVQEGVENIVTE 180
           GLWRPTP+IRAKRLEKLLDTPARIYYKYEGVSPAGSHK NSAVPQ +YNVQEGV+N+VTE
Sbjct: 121 GLWRPTPLIRAKRLEKLLDTPARIYYKYEGVSPAGSHKPNSAVPQVYYNVQEGVKNVVTE 180

Query: 181 TGADQWGSALAFACSLFNLGCEVWQVRASYDQKPYRRLMMQTWGTKVHPSPSDLTRAGRK 240
           TGA QWG +LAFACS+F +GCEVWQVRASYDQKPYRR+MM+TWG KVHPSPSD+T AGRK
Sbjct: 181 TGAGQWGCSLAFACSIFGIGCEVWQVRASYDQKPYRRMMMETWGAKVHPSPSDMTDAGRK 240

Query: 241 LLQVDPSSPGSLGIAISEAVEVATQNADTN---------------------IEQMKALGE 300
            LQVDPSSPGSLGIAISEAVEVA  NADT                      ++QM+ALGE
Sbjct: 241 FLQVDPSSPGSLGIAISEAVEVAALNADTKYCLGSVLNHVLLHQTVIGEECLKQMEALGE 300

Query: 301 NPDVIIGCTGGGSNFAGLRFP-----------PVIRAVEPEACPSLTKGVYAYDYGDIAG 360
           +PDVIIGCTGGGSNFAGL FP           PVIRAVEP ACPSLTKGVYAYDYGD AG
Sbjct: 301 SPDVIIGCTGGGSNFAGLSFPFLREKLAGKINPVIRAVEPAACPSLTKGVYAYDYGDTAG 360

Query: 361 TTPLMKMHTLGHNFIPDPIHVGGLRYHGIAPLISHVYNLGLLEAISLPQTECFRGAIQFA 420
            TPLMKMHTLGHNFIPDPIH GGLRYHG+APLISHVYNLGLLEAISLPQTECF+GAIQFA
Sbjct: 361 MTPLMKMHTLGHNFIPDPIHAGGLRYHGMAPLISHVYNLGLLEAISLPQTECFQGAIQFA 420

Query: 421 RTEGIIPAPEPTHAIAATIREALHCRETGEPKVILTAMCGHGHFNLPAYEKYLQGEMTDL 446
           R+EG+IPAPEPTHAIAATI+EAL CRETGE KVILTAMCGHGHF+LPAYEKYLQG +TDL
Sbjct: 421 RSEGLIPAPEPTHAIAATIQEALRCRETGESKVILTAMCGHGHFDLPAYEKYLQGGITDL 480

[Close]

BLAST of Sed0026912 vs. NCBI nr
Match: XP_022134316.1 (uncharacterized protein LOC111006607 [Momordica charantia])

HSP 1 Score: 761.5 bits (1965), Expect = 4.0e-216
Identity = 374/487 (76.80%), Postives = 407/487 (83.57%), Query Frame = 0


Query: 1   MAAQFLAVGPSASSGINGMVGEQLPGCLSLKRNPRHLRFSNGFITKAALNPSLRAVKIPR 60
           MA+ FL    S S  ING VGE+LPG LSLKRNPR+LRFSNG+ T+AA N +L+ V++PR
Sbjct: 1   MASHFLVAASSTSPAINGRVGEELPGRLSLKRNPRNLRFSNGYRTRAASNRNLKPVEVPR 60

Query: 61  QWYNLVADLPVQPPPRLHPKTLEPITPEDF----------RRASTHCFINIPDEVVDIYG 120
           +WYNLVADLPV+PPP LHPKT +PI P+D           + AST  +INIPDEVVDIYG
Sbjct: 61  RWYNLVADLPVKPPPPLHPKTFQPIKPQDLSPLFPDALIEQEASTDRYINIPDEVVDIYG 120

Query: 121 LWRPTPIIRAKRLEKLLDTPARIYYKYEGVSPAGSHKANSAVPQTWYNVQEGVENIVTET 180
           LWRPTP+IRAKRLEKLLDTPARIYYKYEGVSPAGSHKANSAVPQ WYNVQEGV+N+VTET
Sbjct: 121 LWRPTPLIRAKRLEKLLDTPARIYYKYEGVSPAGSHKANSAVPQVWYNVQEGVKNVVTET 180

Query: 181 GADQWGSALAFACSLFNLGCEVWQVRASYDQKPYRRLMMQTWGTKVHPSPSDLTRAGRKL 240
           GA QWGSALAFACS+F LGCEVWQVRASYDQKPYRRLMMQTWG KVHPSPSDLT AGRKL
Sbjct: 181 GAGQWGSALAFACSIFGLGCEVWQVRASYDQKPYRRLMMQTWGVKVHPSPSDLTDAGRKL 240

Query: 241 LQVDPSSPGSLGIAISEAVEVATQNADTN---------------------IEQMKALGEN 300
           LQVDPSSPGSLGIAISEAVEVA  NADT                      ++QM+ALGE+
Sbjct: 241 LQVDPSSPGSLGIAISEAVEVAALNADTKYCLGSVLNHVLLHQTVIGEECLKQMEALGES 300

Query: 301 PDVIIGCTGGGSNFAGLRFP-----------PVIRAVEPEACPSLTKGVYAYDYGDIAGT 360
           PDVIIGCTGGGSNFAGL FP           P++RAVEP ACPSLTKGVYAYD+GD AG 
Sbjct: 301 PDVIIGCTGGGSNFAGLSFPFLREKLAGKINPILRAVEPAACPSLTKGVYAYDFGDTAGM 360

Query: 361 TPLMKMHTLGHNFIPDPIHVGGLRYHGIAPLISHVYNLGLLEAISLPQTECFRGAIQFAR 420
           TPLMKMHTLGHNFIPDPIH GGLRYHG+APLISHVYNLGLLEAISLPQTECF+GAIQFAR
Sbjct: 361 TPLMKMHTLGHNFIPDPIHAGGLRYHGMAPLISHVYNLGLLEAISLPQTECFQGAIQFAR 420

Query: 421 TEGIIPAPEPTHAIAATIREALHCRETGEPKVILTAMCGHGHFNLPAYEKYLQGEMTDLT 446
           +EG+I APEPTHAIAATIREAL CRETGE KVILTAMCGHGHF+LPAYEKYLQG MTDL+
Sbjct: 421 SEGLIAAPEPTHAIAATIREALRCRETGESKVILTAMCGHGHFDLPAYEKYLQGGMTDLS 480

[Close]

BLAST of Sed0026912 vs. NCBI nr
Match: XP_031741291.1 (uncharacterized protein LOC101219640 [Cucumis sativus])

HSP 1 Score: 760.4 bits (1962), Expect = 8.8e-216
Identity = 374/487 (76.80%), Postives = 405/487 (83.16%), Query Frame = 0


Query: 1   MAAQFLAVGPSASSGINGMVGEQLPGCLSLKRNPRHLRFSNGFITKAALNPSLRAVKIPR 60
           MAA FL VG   SS IN  VGEQLPGCLSLKR P HLRFSNG+ TKAA NP+L+AV++PR
Sbjct: 1   MAATFLTVGSLTSSSINN-VGEQLPGCLSLKRVPAHLRFSNGYRTKAASNPNLKAVEVPR 60

Query: 61  QWYNLVADLPVQPPPRLHPKTLEPITPEDF----------RRASTHCFINIPDEVVDIYG 120
           QWYNLVADLPV+PPP LHPKT EPI PED           + AST  +INIPDEVVDIYG
Sbjct: 61  QWYNLVADLPVKPPPPLHPKTYEPIKPEDLSHLFPDELIKQEASTERYINIPDEVVDIYG 120

Query: 121 LWRPTPIIRAKRLEKLLDTPARIYYKYEGVSPAGSHKANSAVPQTWYNVQEGVENIVTET 180
           LWRPTP+IRAKRLEKLLDTPARIYYKYEGVSPAGSHK NSAVPQ WYN QEGV+N+VTET
Sbjct: 121 LWRPTPLIRAKRLEKLLDTPARIYYKYEGVSPAGSHKPNSAVPQVWYNAQEGVKNVVTET 180

Query: 181 GADQWGSALAFACSLFNLGCEVWQVRASYDQKPYRRLMMQTWGTKVHPSPSDLTRAGRKL 240
           GA QWG +LAFACS+F +GCEVWQVRASYDQKPYRR+MM+TWG KVHPSPSD+T AGRK 
Sbjct: 181 GAGQWGCSLAFACSIFGIGCEVWQVRASYDQKPYRRMMMETWGAKVHPSPSDITDAGRKF 240

Query: 241 LQVDPSSPGSLGIAISEAVEVATQNADTN---------------------IEQMKALGEN 300
           LQVDPSSPGSLGIAISEAVEVA  NADT                      ++Q++ALGE 
Sbjct: 241 LQVDPSSPGSLGIAISEAVEVAALNADTKYCLGSVLNHVLLHQTVIGEECLKQLEALGET 300

Query: 301 PDVIIGCTGGGSNFAGLRFP-----------PVIRAVEPEACPSLTKGVYAYDYGDIAGT 360
           PD+IIGCTGGGSNFAGL FP           PVIRAVEP ACPSLTKGVYAYDYGD AG 
Sbjct: 301 PDLIIGCTGGGSNFAGLSFPFLREKLAGNINPVIRAVEPAACPSLTKGVYAYDYGDTAGM 360

Query: 361 TPLMKMHTLGHNFIPDPIHVGGLRYHGIAPLISHVYNLGLLEAISLPQTECFRGAIQFAR 420
           TPLMKMHTLGHNFIPDPIH GGLRYHG+APLISHVYNLGLLEAISLPQTECF+GAIQFAR
Sbjct: 361 TPLMKMHTLGHNFIPDPIHAGGLRYHGMAPLISHVYNLGLLEAISLPQTECFQGAIQFAR 420

Query: 421 TEGIIPAPEPTHAIAATIREALHCRETGEPKVILTAMCGHGHFNLPAYEKYLQGEMTDLT 446
           +EG+IPAPEPTHAIAATIREAL CRETGE KVILTAMCGHGHF+LPAYEKYLQG ++DL+
Sbjct: 421 SEGLIPAPEPTHAIAATIREALRCRETGESKVILTAMCGHGHFDLPAYEKYLQGGISDLS 480

[Close]

BLAST of Sed0026912 vs. NCBI nr
Match: XP_008459440.1 (PREDICTED: tryptophan synthase beta chain 2-like [Cucumis melo])

HSP 1 Score: 756.5 bits (1952), Expect = 1.3e-214
Identity = 371/487 (76.18%), Postives = 406/487 (83.37%), Query Frame = 0


Query: 1   MAAQFLAVGPSASSGINGMVGEQLPGCLSLKRNPRHLRFSNGFITKAALNPSLRAVKIPR 60
           MAA FL VG   SS IN  VGEQLPGCLSLKR P HLRFSNG+ TK+A NP+L+AV+IPR
Sbjct: 1   MAATFLTVGSLTSSSINN-VGEQLPGCLSLKRVPTHLRFSNGYRTKSASNPNLKAVEIPR 60

Query: 61  QWYNLVADLPVQPPPRLHPKTLEPITPEDF----------RRASTHCFINIPDEVVDIYG 120
           QWYNLVADLPV+PPP LHPKT EPI PED           + AST  +INIPDEVVDIYG
Sbjct: 61  QWYNLVADLPVKPPPPLHPKTYEPIKPEDLSHLFPDELIKQEASTERYINIPDEVVDIYG 120

Query: 121 LWRPTPIIRAKRLEKLLDTPARIYYKYEGVSPAGSHKANSAVPQTWYNVQEGVENIVTET 180
           LWRPTP+IRAKRLEKLLDTPARIYYKYEGVSPAGSHK NSAVPQ WYN QEGV+N+VTET
Sbjct: 121 LWRPTPLIRAKRLEKLLDTPARIYYKYEGVSPAGSHKPNSAVPQVWYNAQEGVKNVVTET 180

Query: 181 GADQWGSALAFACSLFNLGCEVWQVRASYDQKPYRRLMMQTWGTKVHPSPSDLTRAGRKL 240
           GA QWG +LAFACS+F +GCEVWQVRASYDQKPYRR+MM+TWG KVHPSPSD+T AGRK 
Sbjct: 181 GAGQWGCSLAFACSIFGIGCEVWQVRASYDQKPYRRMMMETWGAKVHPSPSDVTDAGRKF 240

Query: 241 LQVDPSSPGSLGIAISEAVEVATQNADTN---------------------IEQMKALGEN 300
           LQVDPSSPGSLGIAISEAVEVA  NADT                      ++Q++ALGE+
Sbjct: 241 LQVDPSSPGSLGIAISEAVEVAALNADTKYCLGSVLNHVLLHQTVIGEECLKQLEALGES 300

Query: 301 PDVIIGCTGGGSNFAGLRFP-----------PVIRAVEPEACPSLTKGVYAYDYGDIAGT 360
           PD+IIGCTGGGSNFAGL FP           PVIRAVEP ACPSLTKGVYAYDYGD AG 
Sbjct: 301 PDLIIGCTGGGSNFAGLSFPFLREKLAGNINPVIRAVEPAACPSLTKGVYAYDYGDTAGM 360

Query: 361 TPLMKMHTLGHNFIPDPIHVGGLRYHGIAPLISHVYNLGLLEAISLPQTECFRGAIQFAR 420
           TPLMKMHTLGHNFIPDPIH GGLRYHG+APLISHVYNLGLLEA+SLPQTECF+GAI+FAR
Sbjct: 361 TPLMKMHTLGHNFIPDPIHAGGLRYHGMAPLISHVYNLGLLEAVSLPQTECFQGAIKFAR 420

Query: 421 TEGIIPAPEPTHAIAATIREALHCRETGEPKVILTAMCGHGHFNLPAYEKYLQGEMTDLT 446
           +EG+IPAPEPTHAIAATIREAL CRETGE KVILTAMCGHGHF+LPAYEKYLQG +TDL+
Sbjct: 421 SEGLIPAPEPTHAIAATIREALRCRETGESKVILTAMCGHGHFDLPAYEKYLQGGITDLS 480

[Close]

BLAST of Sed0026912 vs. NCBI nr
Match: KAE8648956.1 (hypothetical protein Csa_007904 [Cucumis sativus])

HSP 1 Score: 747.3 bits (1928), Expect = 7.7e-212
Identity = 367/487 (75.36%), Postives = 398/487 (81.72%), Query Frame = 0


Query: 1   MAAQFLAVGPSASSGINGMVGEQLPGCLSLKRNPRHLRFSNGFITKAALNPSLRAVKIPR 60
           MAA FL VG   SS IN  VGEQLPGCLSLKR P HLRFSNG+ TKAA NP+L+AV++PR
Sbjct: 1   MAATFLTVGSLTSSSINN-VGEQLPGCLSLKRVPAHLRFSNGYRTKAASNPNLKAVEVPR 60

Query: 61  QWYNLVADLPVQPPPRLHPKTLEPITPEDF----------RRASTHCFINIPDEVVDIYG 120
           QWYNLVADLPV+PPP LHPKT EPI PED           + AST  +INIPDEVVDIYG
Sbjct: 61  QWYNLVADLPVKPPPPLHPKTYEPIKPEDLSHLFPDELIKQEASTERYINIPDEVVDIYG 120

Query: 121 LWRPTPIIRAKRLEKLLDTPARIYYKYEGVSPAGSHKANSAVPQTWYNVQEGVENIVTET 180
           LWRPTP+IRAKRLEKLLDTPARIYYKYEGVSPAGSHK NSAVPQ WYN QEGV+N+VTET
Sbjct: 121 LWRPTPLIRAKRLEKLLDTPARIYYKYEGVSPAGSHKPNSAVPQVWYNAQEGVKNVVTET 180

Query: 181 GADQWGSALAFACSLFNLGCEVWQVRASYDQKPYRRLMMQTWGTKVHPSPSDLTRAGRKL 240
           GA QWG +LAFACS+F +GCEVWQVRASYDQKPYRR+MM+TWG KVHPSPS++T  GRK 
Sbjct: 181 GAGQWGCSLAFACSIFGIGCEVWQVRASYDQKPYRRIMMETWGAKVHPSPSNITDVGRKF 240

Query: 241 LQVDPSSPGSLGIAISEAVEVATQNADTN---------------------IEQMKALGEN 300
           LQVDPSS GSLGIAISEA E+AT N DT                      ++QM+ALGE+
Sbjct: 241 LQVDPSSSGSLGIAISEATEIATLNVDTRYCLGSVLNHVLLHQTVIGEECLKQMEALGES 300

Query: 301 PDVIIGCTGGGSNFAGLRFP-----------PVIRAVEPEACPSLTKGVYAYDYGDIAGT 360
           PDV+IGCTGGGSNFAGL FP           PVIRA EP ACPSLTKGVYAYDYGD AG 
Sbjct: 301 PDVVIGCTGGGSNFAGLAFPFLREKLAGKMNPVIRAAEPAACPSLTKGVYAYDYGDTAGM 360

Query: 361 TPLMKMHTLGHNFIPDPIHVGGLRYHGIAPLISHVYNLGLLEAISLPQTECFRGAIQFAR 420
           TPLMKMHTLGHNFIPDPIH GGLRYHGIAPLISHVYNLGLLEAISLPQTECFRGA+QFAR
Sbjct: 361 TPLMKMHTLGHNFIPDPIHAGGLRYHGIAPLISHVYNLGLLEAISLPQTECFRGAVQFAR 420

Query: 421 TEGIIPAPEPTHAIAATIREALHCRETGEPKVILTAMCGHGHFNLPAYEKYLQGEMTDLT 446
           +EG+IPAPEPTHAIAATIREAL CR+TGE KVILTAM GHGHF+LP YEKYLQG + DL+
Sbjct: 421 SEGLIPAPEPTHAIAATIREALRCRDTGESKVILTAMSGHGHFDLPVYEKYLQGGIRDLS 480

[Close]

BLAST of Sed0026912 vs. ExPASy Swiss-Prot
Match: O67409 (Tryptophan synthase beta chain 2 OS=Aquifex aeolicus (strain VF5) OX=224324 GN=trpB2 PE=3 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 1.0e-126
Identity = 229/425 (53.88%), Postives = 284/425 (66.82%), Query Frame = 0


Query: 57  KIPRQWYNLVADLPVQPPPRLHPKTLEPITPEDF----------RRASTHCFINIPDEVV 116
           +IP++W N++  LP    P L P+T+EP+ PE            +  S   +I+IP+EV+
Sbjct: 10  EIPKKWLNILPLLPEPLEPPLDPETMEPVKPEKLLAIFPEPLVEQEVSDKEWIDIPEEVL 69

Query: 117 DIYGLWRPTPIIRAKRLEKLLDTPARIYYKYEGVSPAGSHKANSAVPQTWYNVQEGVENI 176
           DIY LWRPTP+ RAK LE+ L TPA+I+YK E VSP GSHK N+AV Q +YN   GV+ +
Sbjct: 70  DIYSLWRPTPLHRAKNLEEFLGTPAKIFYKNESVSPPGSHKPNTAVAQAYYNKISGVKRL 129

Query: 177 VTETGADQWGSALAFACSLFNLGCEVWQVRASYDQKPYRRLMMQTWGTKVHPSPSDLTRA 236
            TETGA QWGSAL+FA   F+L C V+ VR SY+QKPYRR++M+TW  +V PSPS  T A
Sbjct: 130 TTETGAGQWGSALSFATQFFDLQCRVYMVRVSYNQKPYRRILMETWKGEVIPSPSPYTNA 189

Query: 237 GRKLLQVDPSSPGSLGIAISEAVEVATQNADTNI---------------------EQMKA 296
           GRK  + +P  PGSLGIAISEA+E A    DT                       +QM+ 
Sbjct: 190 GRKYYEENPEHPGSLGIAISEAIEEAASREDTKYSLGSVLNHVLLHQTVIGLEAKKQMEE 249

Query: 297 LGENPDVIIGCTGGGSNFAGLRFP---PVIR-----------AVEPEACPSLTKGVYAYD 356
            G  PDVIIG  GGGSNFAGL FP    V+R           AVEPEACP+LTKG Y YD
Sbjct: 250 AGYYPDVIIGAVGGGSNFAGLSFPFLADVLRGDKRKEDLKVLAVEPEACPTLTKGEYKYD 309

Query: 357 YGDIAGTTPLMKMHTLGHNFIPDPIHVGGLRYHGIAPLISHVYNLGLLEAISLPQTECFR 416
           +GD  G TPL+KM+TLGH+F+P PIH GGLRYHG APL+  +YNLG ++A++  QTE F 
Sbjct: 310 FGDSVGLTPLIKMYTLGHDFVPSPIHAGGLRYHGDAPLVCKLYNLGYIDAVAYKQTEVFE 369

Query: 417 GAIQFARTEGIIPAPEPTHAIAATIREALHCRETGEPKVILTAMCGHGHFNLPAYEKYLQ 437
            A+ FARTEGI+PAPE  HAI A I EAL C+ETGE KVIL  + GHG+F+L AY+KYL 
Sbjct: 370 AAVTFARTEGIVPAPESAHAIKAAIDEALKCKETGEEKVILFNLSGHGYFDLSAYDKYLH 429

[Close]

BLAST of Sed0026912 vs. ExPASy Swiss-Prot
Match: O29028 (Tryptophan synthase beta chain 2 OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) OX=224325 GN=trpB2 PE=3 SV=1)

HSP 1 Score: 445.7 bits (1145), Expect = 6.3e-124
Identity = 219/420 (52.14%), Postives = 278/420 (66.19%), Query Frame = 0


Query: 57  KIPRQWYNLVADLPVQPPPRLHPKTLEPITPEDF----------RRASTHCFINIPDEVV 116
           ++P++WYN++ DLP   PP LHP T EP+ PED           +  S   +I IP++V 
Sbjct: 15  EMPKEWYNVLPDLPEPLPPPLHPATQEPVKPEDLEPIFPKGLIQQEMSGERWIRIPEDVR 74

Query: 117 DIYGLWRPTPIIRAKRLEKLLDTPARIYYKYEGVSPAGSHKANSAVPQTWYNVQEGVENI 176
           +IY +WRPTP++RA+RLEK L TPARIY+KYEG SP GSHK N+AV Q +YN +EGVE +
Sbjct: 75  EIYRIWRPTPLVRAERLEKALKTPARIYFKYEGASPPGSHKPNTAVAQAYYNAKEGVERL 134

Query: 177 VTETGADQWGSALAFACSLFNLGCEVWQVRASYDQKPYRRLMMQTWGTKVHPSPSDLTRA 236
            TETGA QWGSAL FA  LF + C V+ V+ S+ QKPYRR+MM+TWG +V PSPSD T  
Sbjct: 135 TTETGAGQWGSALCFATKLFEMACTVYMVKVSFMQKPYRRVMMETWGGEVIPSPSDRTEV 194

Query: 237 GRKLLQVDPSSPGSLGIAISEAVEVATQNADTNIE---------------------QMKA 296
           GRK+L  +P +PGSLGIAISEA+E A +N +T                        Q++ 
Sbjct: 195 GRKILAENPDTPGSLGIAISEAIEDAAKNENTKYSLGSVLNHVLLHQTVIGLETKAQLEK 254

Query: 297 LGENPDVIIGCTGGGSNFAGLRFPPV---------IRAVEPEACPSLTKGVYAYDYGDIA 356
           + E PDV+IGC GGGSNFAGL +P V         I AVEP ACP+LT G Y YD+GD+A
Sbjct: 255 VDEKPDVLIGCVGGGSNFAGLTYPFVNDAKNGDLEIIAVEPAACPTLTAGEYKYDFGDVA 314

Query: 357 GTTPLMKMHTLGHNFIPDPIHVGGLRYHGIAPLISHVYNLGLLEAISLPQTECFRGAIQF 416
           G TPL+KM+TLGH+FIP PIH GGLRYHG AP +  +   G+++A ++ Q   F   + F
Sbjct: 315 GLTPLLKMYTLGHDFIPPPIHAGGLRYHGDAPTLCMLVKHGVIKARAVKQLPTFEAGLLF 374

Query: 417 ARTEGIIPAPEPTHAIAATIREALHCRETGEPKVILTAMCGHGHFNLPAYEKYLQGEMTD 437
           ARTEGIIPAPE  HA+ A I EA+  RE  E KVI+    GHG  +L AY+ YL G + D
Sbjct: 375 ARTEGIIPAPETNHAVRAAIDEAIKARENNEEKVIVFGFSGHGLLDLQAYDDYLAGRLAD 434

[Close]

BLAST of Sed0026912 vs. ExPASy Swiss-Prot
Match: Q8TL44 (Tryptophan synthase beta chain 2 OS=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) OX=188937 GN=trpB2 PE=3 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 2.1e-119
Identity = 210/420 (50.00%), Postives = 282/420 (67.14%), Query Frame = 0


Query: 57  KIPRQWYNLVADLPVQPPPRLHPKTLEPITPED----------FRRASTHCFINIPDEVV 116
           ++P++WYN++ADLP    P L P+T +PI+P+            +  S+  +I+IP+EV+
Sbjct: 22  EMPKKWYNVLADLPSPIDPPLDPRTWQPISPDALEPIFPKALIMQEMSSDRYIDIPEEVL 81

Query: 117 DIYGLWRPTPIIRAKRLEKLLDTPARIYYKYEGVSPAGSHKANSAVPQTWYNVQEGVENI 176
           D+Y LWRP+P+ RA +LEK+L +PA+IYYKYEGVSPAGSHK N+++ Q +YN++EG E +
Sbjct: 82  DVYRLWRPSPLFRAHQLEKVLKSPAKIYYKYEGVSPAGSHKTNTSIAQAYYNMKEGTERL 141

Query: 177 VTETGADQWGSALAFACSLFNLGCEVWQVRASYDQKPYRRLMMQTWGTKVHPSPSDLTRA 236
            TETGA QWGSAL+ AC+ F+L C+V+ VR+S+ QKPYR+ ++  WG  V PSPS  T  
Sbjct: 142 TTETGAGQWGSALSLACNYFDLECKVYMVRSSFYQKPYRKSLITLWGGNVVPSPSPDTEF 201

Query: 237 GRKLLQVDPSSPGSLGIAISEAVEVATQNADTNI---------------------EQMKA 296
           GRK+LQ  P +PGSLGIAISEAVE A  + +T                       +Q+  
Sbjct: 202 GRKILQEQPDTPGSLGIAISEAVEDAIAHENTKYSLGSVLNHVVLHQTVIGAECKQQLAQ 261

Query: 297 LGENPDVIIGCTGGGSNFAGL-----------RFPPVIRAVEPEACPSLTKGVYAYDYGD 356
           + E PDV+IGC GGGSN  G+           +    + AVEP ACPSLTKG Y YD+GD
Sbjct: 262 VEEYPDVVIGCCGGGSNLGGIGLEFIKDRLEGKHSARVVAVEPSACPSLTKGEYRYDFGD 321

Query: 357 IAGTTPLMKMHTLGHNFIPDPIHVGGLRYHGIAPLISHVYNLGLLEAISLPQTECFRGAI 416
            A  TPL+KM+TLGH  +P  IH GGLRYHG +P+IS + + GL+EA+S  Q E F  A+
Sbjct: 322 TAEMTPLLKMYTLGHKHVPPAIHAGGLRYHGDSPIISKLCSEGLMEAVSYDQQEVFDAAV 381

Query: 417 QFARTEGIIPAPEPTHAIAATIREALHCRETGEPKVILTAMCGHGHFNLPAYEKYLQGEM 435
           QFARTEGI+PAPE +HAI   I EAL  ++TGE K IL  + GHGHF++ +Y+KY  GE+
Sbjct: 382 QFARTEGIVPAPESSHAIRCAIDEALAAKQTGEEKTILFNLSGHGHFDMSSYDKYFSGEL 441

[Close]

BLAST of Sed0026912 vs. ExPASy Swiss-Prot
Match: Q8Q001 (Tryptophan synthase beta chain 2 OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) OX=192952 GN=trpB2 PE=3 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 1.0e-118
Identity = 212/420 (50.48%), Postives = 279/420 (66.43%), Query Frame = 0


Query: 57  KIPRQWYNLVADLPVQPPPRLHPKTLEPITPEDF----------RRASTHCFINIPDEVV 116
           ++P++WYN+++DLP    P L P+T +PI PE            +  S+  +I+IP E++
Sbjct: 22  EMPKRWYNVLSDLPSPIDPPLDPRTWQPINPEALEPIFAKELIRQEMSSDRYIDIPAEIL 81

Query: 117 DIYGLWRPTPIIRAKRLEKLLDTPARIYYKYEGVSPAGSHKANSAVPQTWYNVQEGVENI 176
           D+Y LWRP+P+ RA +LEK L TPA+IYYKYEGVSPAGSHK N+++ Q +YN++EG E +
Sbjct: 82  DVYRLWRPSPLFRAHQLEKDLKTPAKIYYKYEGVSPAGSHKTNTSIAQAYYNMKEGTERL 141

Query: 177 VTETGADQWGSALAFACSLFNLGCEVWQVRASYDQKPYRRLMMQTWGTKVHPSPSDLTRA 236
            TETGA QWGSAL+ AC+ F+L C+V+ VR+SY QKPYR+ +M  WG  V PSPS  T  
Sbjct: 142 TTETGAGQWGSALSLACNYFDLECKVYMVRSSYYQKPYRKSLMTLWGGNVVPSPSPDTEF 201

Query: 237 GRKLLQVDPSSPGSLGIAISEAVEVATQNADTNI---------------------EQMKA 296
           GRK+L+  P +PGSLGIAISEAVE A  + +T                       +Q++ 
Sbjct: 202 GRKILKEQPDTPGSLGIAISEAVEDAIAHDNTKYTLGSVLNHVVLHQTVIGAECKKQLEQ 261

Query: 297 LGENPDVIIGCTGGGSNFAGLRFPPV-----------IRAVEPEACPSLTKGVYAYDYGD 356
           + E PDV+IGC GGGSN  G+    +           + AVEP ACPSLTKG Y YD+GD
Sbjct: 262 VEEYPDVVIGCCGGGSNLGGIGLEFIKDRLEGKHNARVVAVEPSACPSLTKGEYRYDFGD 321

Query: 357 IAGTTPLMKMHTLGHNFIPDPIHVGGLRYHGIAPLISHVYNLGLLEAISLPQTECFRGAI 416
            A  TPL+KM+TLGH  IP  IH GGLRYHG +P+IS +   GL+EA+S  Q E F  A+
Sbjct: 322 TAEMTPLLKMYTLGHKHIPPAIHAGGLRYHGDSPIISKLCAEGLMEAVSYGQKEVFDAAV 381

Query: 417 QFARTEGIIPAPEPTHAIAATIREALHCRETGEPKVILTAMCGHGHFNLPAYEKYLQGEM 435
           QFARTEGI+PAPE +HAI   I EAL  ++ GE KVIL  + GHGHF++ +Y+KY  GE+
Sbjct: 382 QFARTEGIVPAPESSHAIRCAIDEALEAKQKGEEKVILFNLSGHGHFDMASYDKYFSGEL 441

[Close]

BLAST of Sed0026912 vs. ExPASy Swiss-Prot
Match: Q9WZ09 (Tryptophan synthase beta chain 2 OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=trpB2 PE=3 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 1.0e-110
Identity = 210/416 (50.48%), Postives = 269/416 (64.66%), Query Frame = 0


Query: 52  SLRAVKIPRQWYNLVADLPVQPPPRLHPKTLEPITPEDF----------RRASTHCFINI 111
           +L+  +IP+ WYN++ADLP +  P L P+T +PI+PE            +  S   FI I
Sbjct: 6   NLKPEEIPKHWYNVLADLPFKLDPPLDPETKQPISPEKLSVIFPMSLIEQEVSEERFIEI 65

Query: 112 PDEVVDIYGLWRPTPIIRAKRLEKLLDTPARIYYKYEGVSPAGSHKANSAVPQTWYNVQE 171
           P+ V+  Y ++RPTP+IRA  LE+ L TPARIYYKYEGVSP GSHK N+A+ Q +YN  E
Sbjct: 66  PEPVLKEYAVYRPTPLIRATFLEEYLQTPARIYYKYEGVSPTGSHKPNTAIAQAYYNKIE 125

Query: 172 GVENIVTETGADQWGSALAFACSLFNLGCEVWQVRASYDQKPYRRLMMQTWGTKVHPSPS 231
           GV+ +VTETGA QWGSAL++A + F L  +V+ V+ SY QKP R+ MM  +G KV PSPS
Sbjct: 126 GVKRLVTETGAGQWGSALSYAGAKFGLEVKVFMVKVSYQQKPMRKYMMNLFGGKVTPSPS 185

Query: 232 DLTRAGRKLLQVDPSSPGSLGIAISEAVEVATQNADTNI--------------------- 291
           + T  GRK+L  DP +PGSLGIAISEA+EVA  + +T                       
Sbjct: 186 EETNFGRKILSEDPDNPGSLGIAISEALEVAVSDPNTKYSLGSVLNHVLLHQTVIGLEIK 245

Query: 292 EQMKALGENPDVIIGCTGGGSNFAGLRFPPV--------IR--AVEPEACPSLTKGVYAY 351
           +Q++ +GE PD+++GC GGGSNF G   P V        IR  A EP ACPSLTKG Y Y
Sbjct: 246 KQLELIGEKPDILLGCHGGGSNFGGTILPFVPDKLSGRDIRFVACEPAACPSLTKGNYDY 305

Query: 352 DYGDIAGTTPLMKMHTLGHNFIPDPIHVGGLRYHGIAPLISHVYNLGLLEAISLPQTECF 411
           D+GD AG TPL+KM+TLG +FIP  IH GGLRYHG AP+I+ +   GL+EA +  Q E F
Sbjct: 306 DFGDTAGLTPLLKMYTLGKDFIPPKIHAGGLRYHGSAPIIARLVKEGLVEAQAFDQDETF 365

Query: 412 RGAIQFARTEGIIPAPEPTHAIAATIREALHCRETGEPKVILTAMCGHGHFNLPAY 427
             A  FA+ EGIIPAPE  HAIA  IREA   +E G+ +VI+  + GHG  +L AY
Sbjct: 366 EAAKIFAKLEGIIPAPESAHAIAGAIREAKKAKEEGKERVIVFTLSGHGLLDLTAY 421

[Close]

BLAST of Sed0026912 vs. ExPASy TrEMBL
Match: A0A6J1BXI7 (Tryptophan synthase OS=Momordica charantia OX=3673 GN=LOC111006607 PE=3 SV=1)

HSP 1 Score: 761.5 bits (1965), Expect = 1.9e-216
Identity = 374/487 (76.80%), Postives = 407/487 (83.57%), Query Frame = 0


Query: 1   MAAQFLAVGPSASSGINGMVGEQLPGCLSLKRNPRHLRFSNGFITKAALNPSLRAVKIPR 60
           MA+ FL    S S  ING VGE+LPG LSLKRNPR+LRFSNG+ T+AA N +L+ V++PR
Sbjct: 1   MASHFLVAASSTSPAINGRVGEELPGRLSLKRNPRNLRFSNGYRTRAASNRNLKPVEVPR 60

Query: 61  QWYNLVADLPVQPPPRLHPKTLEPITPEDF----------RRASTHCFINIPDEVVDIYG 120
           +WYNLVADLPV+PPP LHPKT +PI P+D           + AST  +INIPDEVVDIYG
Sbjct: 61  RWYNLVADLPVKPPPPLHPKTFQPIKPQDLSPLFPDALIEQEASTDRYINIPDEVVDIYG 120

Query: 121 LWRPTPIIRAKRLEKLLDTPARIYYKYEGVSPAGSHKANSAVPQTWYNVQEGVENIVTET 180
           LWRPTP+IRAKRLEKLLDTPARIYYKYEGVSPAGSHKANSAVPQ WYNVQEGV+N+VTET
Sbjct: 121 LWRPTPLIRAKRLEKLLDTPARIYYKYEGVSPAGSHKANSAVPQVWYNVQEGVKNVVTET 180

Query: 181 GADQWGSALAFACSLFNLGCEVWQVRASYDQKPYRRLMMQTWGTKVHPSPSDLTRAGRKL 240
           GA QWGSALAFACS+F LGCEVWQVRASYDQKPYRRLMMQTWG KVHPSPSDLT AGRKL
Sbjct: 181 GAGQWGSALAFACSIFGLGCEVWQVRASYDQKPYRRLMMQTWGVKVHPSPSDLTDAGRKL 240

Query: 241 LQVDPSSPGSLGIAISEAVEVATQNADTN---------------------IEQMKALGEN 300
           LQVDPSSPGSLGIAISEAVEVA  NADT                      ++QM+ALGE+
Sbjct: 241 LQVDPSSPGSLGIAISEAVEVAALNADTKYCLGSVLNHVLLHQTVIGEECLKQMEALGES 300

Query: 301 PDVIIGCTGGGSNFAGLRFP-----------PVIRAVEPEACPSLTKGVYAYDYGDIAGT 360
           PDVIIGCTGGGSNFAGL FP           P++RAVEP ACPSLTKGVYAYD+GD AG 
Sbjct: 301 PDVIIGCTGGGSNFAGLSFPFLREKLAGKINPILRAVEPAACPSLTKGVYAYDFGDTAGM 360

Query: 361 TPLMKMHTLGHNFIPDPIHVGGLRYHGIAPLISHVYNLGLLEAISLPQTECFRGAIQFAR 420
           TPLMKMHTLGHNFIPDPIH GGLRYHG+APLISHVYNLGLLEAISLPQTECF+GAIQFAR
Sbjct: 361 TPLMKMHTLGHNFIPDPIHAGGLRYHGMAPLISHVYNLGLLEAISLPQTECFQGAIQFAR 420

Query: 421 TEGIIPAPEPTHAIAATIREALHCRETGEPKVILTAMCGHGHFNLPAYEKYLQGEMTDLT 446
           +EG+I APEPTHAIAATIREAL CRETGE KVILTAMCGHGHF+LPAYEKYLQG MTDL+
Sbjct: 421 SEGLIAAPEPTHAIAATIREALRCRETGESKVILTAMCGHGHFDLPAYEKYLQGGMTDLS 480

[Close]

BLAST of Sed0026912 vs. ExPASy TrEMBL
Match: A0A0A0KUJ4 (Tryptophan synthase OS=Cucumis sativus OX=3659 GN=Csa_5G643330 PE=3 SV=1)

HSP 1 Score: 759.2 bits (1959), Expect = 9.5e-216
Identity = 373/487 (76.59%), Postives = 405/487 (83.16%), Query Frame = 0


Query: 1   MAAQFLAVGPSASSGINGMVGEQLPGCLSLKRNPRHLRFSNGFITKAALNPSLRAVKIPR 60
           MAA FL VG   SS IN  VGEQLPGCLSLKR P HLRFSNG+ TKAA NP+L++V++PR
Sbjct: 1   MAATFLTVGSLTSSSINN-VGEQLPGCLSLKRVPAHLRFSNGYRTKAASNPNLKSVEVPR 60

Query: 61  QWYNLVADLPVQPPPRLHPKTLEPITPEDF----------RRASTHCFINIPDEVVDIYG 120
           QWYNLVADLPV+PPP LHPKT EPI PED           + AST  +INIPDEVVDIYG
Sbjct: 61  QWYNLVADLPVKPPPPLHPKTYEPIKPEDLSHLFPDELIKQEASTERYINIPDEVVDIYG 120

Query: 121 LWRPTPIIRAKRLEKLLDTPARIYYKYEGVSPAGSHKANSAVPQTWYNVQEGVENIVTET 180
           LWRPTP+IRAKRLEKLLDTPARIYYKYEGVSPAGSHK NSAVPQ WYN QEGV+N+VTET
Sbjct: 121 LWRPTPLIRAKRLEKLLDTPARIYYKYEGVSPAGSHKPNSAVPQVWYNAQEGVKNVVTET 180

Query: 181 GADQWGSALAFACSLFNLGCEVWQVRASYDQKPYRRLMMQTWGTKVHPSPSDLTRAGRKL 240
           GA QWG +LAFACS+F +GCEVWQVRASYDQKPYRR+MM+TWG KVHPSPSD+T AGRK 
Sbjct: 181 GAGQWGCSLAFACSIFGIGCEVWQVRASYDQKPYRRMMMETWGAKVHPSPSDITDAGRKF 240

Query: 241 LQVDPSSPGSLGIAISEAVEVATQNADTN---------------------IEQMKALGEN 300
           LQVDPSSPGSLGIAISEAVEVA  NADT                      ++Q++ALGE 
Sbjct: 241 LQVDPSSPGSLGIAISEAVEVAALNADTKYCLGSVLNHVLLHQTVIGEECLKQLEALGET 300

Query: 301 PDVIIGCTGGGSNFAGLRFP-----------PVIRAVEPEACPSLTKGVYAYDYGDIAGT 360
           PD+IIGCTGGGSNFAGL FP           PVIRAVEP ACPSLTKGVYAYDYGD AG 
Sbjct: 301 PDLIIGCTGGGSNFAGLSFPFLREKLAGNINPVIRAVEPAACPSLTKGVYAYDYGDTAGM 360

Query: 361 TPLMKMHTLGHNFIPDPIHVGGLRYHGIAPLISHVYNLGLLEAISLPQTECFRGAIQFAR 420
           TPLMKMHTLGHNFIPDPIH GGLRYHG+APLISHVYNLGLLEAISLPQTECF+GAIQFAR
Sbjct: 361 TPLMKMHTLGHNFIPDPIHAGGLRYHGMAPLISHVYNLGLLEAISLPQTECFQGAIQFAR 420

Query: 421 TEGIIPAPEPTHAIAATIREALHCRETGEPKVILTAMCGHGHFNLPAYEKYLQGEMTDLT 446
           +EG+IPAPEPTHAIAATIREAL CRETGE KVILTAMCGHGHF+LPAYEKYLQG ++DL+
Sbjct: 421 SEGLIPAPEPTHAIAATIREALRCRETGESKVILTAMCGHGHFDLPAYEKYLQGGISDLS 480

[Close]

BLAST of Sed0026912 vs. ExPASy TrEMBL
Match: A0A1S3CA62 (Tryptophan synthase OS=Cucumis melo OX=3656 GN=LOC103498574 PE=3 SV=1)

HSP 1 Score: 756.5 bits (1952), Expect = 6.2e-215
Identity = 371/487 (76.18%), Postives = 406/487 (83.37%), Query Frame = 0


Query: 1   MAAQFLAVGPSASSGINGMVGEQLPGCLSLKRNPRHLRFSNGFITKAALNPSLRAVKIPR 60
           MAA FL VG   SS IN  VGEQLPGCLSLKR P HLRFSNG+ TK+A NP+L+AV+IPR
Sbjct: 1   MAATFLTVGSLTSSSINN-VGEQLPGCLSLKRVPTHLRFSNGYRTKSASNPNLKAVEIPR 60

Query: 61  QWYNLVADLPVQPPPRLHPKTLEPITPEDF----------RRASTHCFINIPDEVVDIYG 120
           QWYNLVADLPV+PPP LHPKT EPI PED           + AST  +INIPDEVVDIYG
Sbjct: 61  QWYNLVADLPVKPPPPLHPKTYEPIKPEDLSHLFPDELIKQEASTERYINIPDEVVDIYG 120

Query: 121 LWRPTPIIRAKRLEKLLDTPARIYYKYEGVSPAGSHKANSAVPQTWYNVQEGVENIVTET 180
           LWRPTP+IRAKRLEKLLDTPARIYYKYEGVSPAGSHK NSAVPQ WYN QEGV+N+VTET
Sbjct: 121 LWRPTPLIRAKRLEKLLDTPARIYYKYEGVSPAGSHKPNSAVPQVWYNAQEGVKNVVTET 180

Query: 181 GADQWGSALAFACSLFNLGCEVWQVRASYDQKPYRRLMMQTWGTKVHPSPSDLTRAGRKL 240
           GA QWG +LAFACS+F +GCEVWQVRASYDQKPYRR+MM+TWG KVHPSPSD+T AGRK 
Sbjct: 181 GAGQWGCSLAFACSIFGIGCEVWQVRASYDQKPYRRMMMETWGAKVHPSPSDVTDAGRKF 240

Query: 241 LQVDPSSPGSLGIAISEAVEVATQNADTN---------------------IEQMKALGEN 300
           LQVDPSSPGSLGIAISEAVEVA  NADT                      ++Q++ALGE+
Sbjct: 241 LQVDPSSPGSLGIAISEAVEVAALNADTKYCLGSVLNHVLLHQTVIGEECLKQLEALGES 300

Query: 301 PDVIIGCTGGGSNFAGLRFP-----------PVIRAVEPEACPSLTKGVYAYDYGDIAGT 360
           PD+IIGCTGGGSNFAGL FP           PVIRAVEP ACPSLTKGVYAYDYGD AG 
Sbjct: 301 PDLIIGCTGGGSNFAGLSFPFLREKLAGNINPVIRAVEPAACPSLTKGVYAYDYGDTAGM 360

Query: 361 TPLMKMHTLGHNFIPDPIHVGGLRYHGIAPLISHVYNLGLLEAISLPQTECFRGAIQFAR 420
           TPLMKMHTLGHNFIPDPIH GGLRYHG+APLISHVYNLGLLEA+SLPQTECF+GAI+FAR
Sbjct: 361 TPLMKMHTLGHNFIPDPIHAGGLRYHGMAPLISHVYNLGLLEAVSLPQTECFQGAIKFAR 420

Query: 421 TEGIIPAPEPTHAIAATIREALHCRETGEPKVILTAMCGHGHFNLPAYEKYLQGEMTDLT 446
           +EG+IPAPEPTHAIAATIREAL CRETGE KVILTAMCGHGHF+LPAYEKYLQG +TDL+
Sbjct: 421 SEGLIPAPEPTHAIAATIREALRCRETGESKVILTAMCGHGHFDLPAYEKYLQGGITDLS 480

[Close]

BLAST of Sed0026912 vs. ExPASy TrEMBL
Match: A0A6J1JY44 (Tryptophan synthase OS=Cucurbita maxima OX=3661 GN=LOC111489338 PE=3 SV=1)

HSP 1 Score: 733.8 bits (1893), Expect = 4.3e-208
Identity = 361/480 (75.21%), Postives = 395/480 (82.29%), Query Frame = 0


Query: 8   VGPSASSGINGMVGEQLPGCLSLKRNPRHLRFSNGFITKAALNPSLRAVKIPRQWYNLVA 67
           V  S SSGING       GCLS++R PRHLRFSNG+ TKAA NP+L+AV++PRQWYNLVA
Sbjct: 2   VASSISSGING------GGCLSIERIPRHLRFSNGYRTKAASNPNLKAVEVPRQWYNLVA 61

Query: 68  DLPVQPPPRLHPKTLEPITPEDF----------RRASTHCFINIPDEVVDIYGLWRPTPI 127
           DLPV+PPP LHPKT EPI PED           + AS   +I+IPDEVVDIYGLWRPTP+
Sbjct: 62  DLPVKPPPPLHPKTFEPIKPEDLSPLFPDELIKQEASAERYIDIPDEVVDIYGLWRPTPL 121

Query: 128 IRAKRLEKLLDTPARIYYKYEGVSPAGSHKANSAVPQTWYNVQEGVENIVTETGADQWGS 187
           IRAKRLEKLLDTPARIYYKYEGVSPAGSHK NSAVPQ WYNVQEGV+N+VTETGA QWG 
Sbjct: 122 IRAKRLEKLLDTPARIYYKYEGVSPAGSHKPNSAVPQVWYNVQEGVKNVVTETGAGQWGC 181

Query: 188 ALAFACSLFNLGCEVWQVRASYDQKPYRRLMMQTWGTKVHPSPSDLTRAGRKLLQVDPSS 247
           +LAFACSLF +GCEVWQVRASYDQKPYRR+MM+TWG KVHPSPS++T +GRK LQVDPSS
Sbjct: 182 SLAFACSLFGIGCEVWQVRASYDQKPYRRMMMETWGAKVHPSPSNVTDSGRKFLQVDPSS 241

Query: 248 PGSLGIAISEAVEVATQNADTN---------------------IEQMKALGENPDVIIGC 307
           PGSLGIAISEAVEVA  NADT                      ++QM+ALGE PDVIIGC
Sbjct: 242 PGSLGIAISEAVEVAALNADTKYCLGSVLNHVLLHQTVIGEECLKQMEALGETPDVIIGC 301

Query: 308 TGGGSNFAGLRFP-----------PVIRAVEPEACPSLTKGVYAYDYGDIAGTTPLMKMH 367
           TGGGSNFAGL FP           PVIRAVEP ACPSLTKGVYAYDYGD AG TPLMKMH
Sbjct: 302 TGGGSNFAGLSFPFLREKLAGKISPVIRAVEPAACPSLTKGVYAYDYGDTAGMTPLMKMH 361

Query: 368 TLGHNFIPDPIHVGGLRYHGIAPLISHVYNLGLLEAISLPQTECFRGAIQFARTEGIIPA 427
           TLGHNFIPDPIH GGLRYHG+APLISHVY+LGLLEA+SLPQTECF+GAIQFAR+EG+IPA
Sbjct: 362 TLGHNFIPDPIHAGGLRYHGMAPLISHVYDLGLLEAVSLPQTECFQGAIQFARSEGLIPA 421

Query: 428 PEPTHAIAATIREALHCRETGEPKVILTAMCGHGHFNLPAYEKYLQGEMTDLTFADEKIQ 446
           PEPTHAIA TIREAL CRETGE KVILTAMCGHGHF+L AYEKYLQG MTDL+FA+EKI+
Sbjct: 422 PEPTHAIAETIREALRCRETGESKVILTAMCGHGHFDLAAYEKYLQGGMTDLSFAEEKIK 475

[Close]

BLAST of Sed0026912 vs. ExPASy TrEMBL
Match: A0A6J1FH74 (Tryptophan synthase OS=Cucurbita moschata OX=3662 GN=LOC111445435 PE=3 SV=1)

HSP 1 Score: 731.9 bits (1888), Expect = 1.6e-207
Identity = 360/475 (75.79%), Postives = 392/475 (82.53%), Query Frame = 0


Query: 13  SSGINGMVGEQLPGCLSLKRNPRHLRFSNGFITKAALNPSLRAVKIPRQWYNLVADLPVQ 72
           SSGING       GCLSL+R PRHLRFSNG+ TKAA NP+L+AV++PRQWYNLVADLPV+
Sbjct: 7   SSGING------GGCLSLERIPRHLRFSNGYRTKAASNPNLKAVEVPRQWYNLVADLPVK 66

Query: 73  PPPRLHPKTLEPITPEDF----------RRASTHCFINIPDEVVDIYGLWRPTPIIRAKR 132
           PPP LHPKT EPI PED           + AS   +I+IPDEVVDIYGLWRPTP+IRAKR
Sbjct: 67  PPPPLHPKTFEPIKPEDLSPLFPDELIKQEASAERYIDIPDEVVDIYGLWRPTPLIRAKR 126

Query: 133 LEKLLDTPARIYYKYEGVSPAGSHKANSAVPQTWYNVQEGVENIVTETGADQWGSALAFA 192
           LEKLL TPARIYYKYEGVSPAGSHK NSAVPQ WYNVQEGV+N+VTETGA QWG +LAFA
Sbjct: 127 LEKLLGTPARIYYKYEGVSPAGSHKPNSAVPQVWYNVQEGVKNVVTETGAGQWGCSLAFA 186

Query: 193 CSLFNLGCEVWQVRASYDQKPYRRLMMQTWGTKVHPSPSDLTRAGRKLLQVDPSSPGSLG 252
           CSLF +GCEVWQVRASYDQKPYRR+MM+TWG KVHPSPS++T +GRK LQVDPSSPGSLG
Sbjct: 187 CSLFGIGCEVWQVRASYDQKPYRRMMMETWGAKVHPSPSNVTDSGRKFLQVDPSSPGSLG 246

Query: 253 IAISEAVEVATQNADTN---------------------IEQMKALGENPDVIIGCTGGGS 312
           IAISEAVEVA  NADT                      ++QM+ALGE PDVIIGCTGGGS
Sbjct: 247 IAISEAVEVAALNADTKYCLGSVLNHVLLHQTVIGEECLKQMEALGETPDVIIGCTGGGS 306

Query: 313 NFAGLRFP-----------PVIRAVEPEACPSLTKGVYAYDYGDIAGTTPLMKMHTLGHN 372
           NFAGL FP           PVIRAVEP ACPSLTKGVYAYDYGD AG TPLMKMHTLGHN
Sbjct: 307 NFAGLSFPFLREKLAGKISPVIRAVEPAACPSLTKGVYAYDYGDTAGMTPLMKMHTLGHN 366

Query: 373 FIPDPIHVGGLRYHGIAPLISHVYNLGLLEAISLPQTECFRGAIQFARTEGIIPAPEPTH 432
           FIPDPIH GGLRYHG+APLISHVYNLGLLEA+SLPQTECF+GAIQFAR+EG+IPAPEPTH
Sbjct: 367 FIPDPIHAGGLRYHGMAPLISHVYNLGLLEAVSLPQTECFQGAIQFARSEGLIPAPEPTH 426

Query: 433 AIAATIREALHCRETGEPKVILTAMCGHGHFNLPAYEKYLQGEMTDLTFADEKIQ 446
           AIA TIREAL CRETGE KVILTAMCGHGHF+L AYEKYLQG MTDL+FA+EKI+
Sbjct: 427 AIAETIREALRCRETGESKVILTAMCGHGHFDLAAYEKYLQGGMTDLSFAEEKIK 475

[Close]

BLAST of Sed0026912 vs. TAIR 10
Match: AT5G38530.1 (tryptophan synthase beta type 2 )

HSP 1 Score: 629.8 bits (1623), Expect = 1.7e-180
Identity = 316/465 (67.96%), Postives = 358/465 (76.99%), Query Frame = 0


Query: 28  LSLKRNPRH-LRFSNG--FITKAALNP--SLRAVKIPRQWYNLVADLPVQPPPRLHPKTL 87
           L+LKR      R SNG     KAAL    +   V+IP+QWYNLVADL V+PPP LHPKT 
Sbjct: 32  LTLKRKSNQATRVSNGSSLRVKAALRSTHNKSVVEIPKQWYNLVADLSVKPPPPLHPKTF 91

Query: 88  EPITPEDF----------RRASTHCFINIPDEVVDIYGLWRPTPIIRAKRLEKLLDTPAR 147
           EPI PED           + A+   FI+IP+EV++IY LWRPTP+IRAKRLEKLL TPAR
Sbjct: 92  EPIKPEDLAHLFPNELIKQEATQERFIDIPEEVLEIYKLWRPTPLIRAKRLEKLLQTPAR 151

Query: 148 IYYKYEGVSPAGSHKANSAVPQTWYNVQEGVENIVTETGADQWGSALAFACSLFNLGCEV 207
           IY+KYEG SPAGSHK N+AVPQ +YN +EGV+N+VTETGA QWGS+LAFA SLF L CEV
Sbjct: 152 IYFKYEGGSPAGSHKPNTAVPQAYYNAKEGVKNVVTETGAGQWGSSLAFASSLFGLDCEV 211

Query: 208 WQVRASYDQKPYRRLMMQTWGTKVHPSPSDLTRAGRKLLQVDPSSPGSLGIAISEAVEVA 267
           WQV  SY  KPYRRLMMQTWG KVHPSPSDLT AGR++L+ DPSSPGSLGIAISEAVEVA
Sbjct: 212 WQVANSYHTKPYRRLMMQTWGAKVHPSPSDLTEAGRRILESDPSSPGSLGIAISEAVEVA 271

Query: 268 TQNADTN---------------------IEQMKALGENPDVIIGCTGGGSNFAGLRFP-- 327
            +N DT                      I+QM+  GE PD+IIGCTGGGSNFAGL FP  
Sbjct: 272 ARNEDTKYCLGSVLNHVLLHQTIIGEECIQQMENFGETPDLIIGCTGGGSNFAGLSFPFI 331

Query: 328 ---------PVIRAVEPEACPSLTKGVYAYDYGDIAGTTPLMKMHTLGHNFIPDPIHVGG 387
                    PVIRAVEP ACPSLTKGVYAYD+GD AG TPLMKMHTLGH+FIPDPIH GG
Sbjct: 332 REKLKGKINPVIRAVEPSACPSLTKGVYAYDFGDTAGLTPLMKMHTLGHDFIPDPIHAGG 391

Query: 388 LRYHGIAPLISHVYNLGLLEAISLPQTECFRGAIQFARTEGIIPAPEPTHAIAATIREAL 446
           LRYHG+APLISHVY  G +EAIS+PQ ECF+GAIQFARTEGIIPAPEPTHAIAATIREAL
Sbjct: 392 LRYHGMAPLISHVYEQGFMEAISIPQIECFQGAIQFARTEGIIPAPEPTHAIAATIREAL 451

[Close]

BLAST of Sed0026912 vs. TAIR 10
Match: AT5G28237.1 (Pyridoxal-5'-phosphate-dependent enzyme family protein )

HSP 1 Score: 104.4 bits (259), Expect = 2.5e-22
Identity = 89/311 (28.62%), Postives = 133/311 (42.77%), Query Frame = 0


Query: 113 RPTPIIRAKRLEK-------LLDTPARIYYKYEGVSPAGSHKANSAVPQTWYNVQEGVEN 172
           R TP+  A+RL +        ++    IY K E +S  GSHK N+A+ Q   + + G   
Sbjct: 118 RETPLYFAERLTEHYKNIVPTIEGGPEIYLKREDLSHCGSHKINNALAQAMISRRLGCSR 177

Query: 173 IVTETGADQWGSALAFACSLFNLGCEVWQVRASYDQKPYRRLMMQTWGTKVHPSPSDLTR 232
           +V  TGA Q G A A AC+  +L C V+   A  +++ +  L M+  G +V         
Sbjct: 178 VVAATGAGQHGVATAAACAKLSLECTVFMGAADIEKQSFNVLSMKLLGAQVISVEGTFKD 237

Query: 233 AGRK-------------LLQVDPSSPGSLGIAISEAVEVATQNADTNIEQMKALGENPDV 292
           A  +              L      P    I + E   V     +T  +  +  G  PDV
Sbjct: 238 ASSEAIRNWVENLYTTYYLSGTVVGPHPCPIIVREFQSVI--GKETRRQAKQLWGGKPDV 297

Query: 293 IIGCTGGGSNFAGLRFPPV----IRAVEPEACP-SLTKGVYA--YDYGDIA---GTTPLM 352
           ++ C G GSN  GL    V    +R V  EA    L  G ++    +GD+    G+   +
Sbjct: 298 LVACVGSGSNALGLFHEFVGDEDVRLVGVEAAGLGLDSGKHSATLAFGDVGVYHGSMSYL 357

Query: 353 KMHTLGHNFIPDPIHVGGLRYHGIAPLISHVYNLGLLEAISLPQTECFRGAIQFARTEGI 394
                G    P  + V GL Y G+ P IS +   G  E  +    E  +  ++ +R EGI
Sbjct: 358 LQDDQGQILKPHSVGV-GLEYPGVGPEISFMKETGRAEFYTATDEEAIQACMRLSRLEGI 417

[Close]

BLAST of Sed0026912 vs. TAIR 10
Match: AT4G27070.1 (tryptophan synthase beta-subunit 2 )

HSP 1 Score: 102.8 bits (255), Expect = 7.1e-22
Identity = 102/374 (27.27%), Postives = 152/374 (40.64%), Query Frame = 0


Query: 86  TPEDFRRASTHCFINIPDEVVDIYGLWRPTPIIRAKRLEKLLDTPARIYYKYEGVSPAGS 145
           T EDF+R       +       +Y   R T   R +  E  L     IY K E ++  G+
Sbjct: 114 TDEDFQRELAEILKDYVGRESPLYFAERLTEHYRRENGEGPL-----IYLKREDLNHTGA 173

Query: 146 HKANSAVPQTWYNVQEGVENIVTETGADQWGSALAFACSLFNLGCEVWQVRASYDQKPYR 205
           HK N+AV Q     + G + I+ ETGA Q G A A  C+ F L C ++      +++   
Sbjct: 174 HKINNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCARFGLQCIIYMGAQDMERQALN 233

Query: 206 RLMMQTWGTK---VHPSPSDLTRAGRKLLQ-----------VDPSSPGSLGIAISEAVEV 265
              M+  G +   VH   + L  A  + ++           +  S  G     +      
Sbjct: 234 VFRMRLLGAEVRGVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFH 293

Query: 266 ATQNADTNIEQMKALGENPDVIIGCTGGGSNFAGLRFPPV----IRAVEPEA-------- 325
           A    +T  + M+  G  PDV++ C GGGSN  GL    V    +R +  EA        
Sbjct: 294 AVIGKETRKQAMEKWGGKPDVLVACVGGGSNAMGLFHEFVDDTEVRMIGVEAAGFGLDSG 353

Query: 326 --CPSLTKGVYAYDYGDIAGTTPLMKMHTLGHNFIPDPIHVGGLRYHGIAPLISHVYNLG 385
               +LTKG    D G + G    +     G    P  I   GL Y G+ P  S + ++G
Sbjct: 354 KHAATLTKG----DVGVLHGAMSYLLQDDDGQIIEPHSIS-AGLDYPGVGPEHSFLKDVG 413

Query: 386 LLEAISLPQTECFRGAIQFARTEGIIPAPEPTHAIAATIREALHCRETGEPKVILTAMCG 432
             E  S+   E      + +R EGIIPA E +HA+A    E L C    +   ++    G
Sbjct: 414 RAEYFSVTDEEALEAFKRVSRLEGIIPALETSHALAHL--EKL-CPTLPDGARVVLNFSG 473

[Close]

BLAST of Sed0026912 vs. TAIR 10
Match: AT5G54810.1 (tryptophan synthase beta-subunit 1 )

HSP 1 Score: 98.6 bits (244), Expect = 1.3e-20
Identity = 90/326 (27.61%), Postives = 135/326 (41.41%), Query Frame = 0


Query: 133 IYYKYEGVSPAGSHKANSAVPQTWYNVQEGVENIVTETGADQWGSALAFACSLFNLGCEV 192
           IY K E ++  G+HK N+AV Q     + G + I+ ETGA Q G A A  C+ F L C +
Sbjct: 151 IYLKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCARFGLECII 210

Query: 193 WQVRASYDQKPYRRLMMQTWGTK---VHPSPSDLTRAGRKLLQ-----------VDPSSP 252
           +      +++      M+  G +   VH   + L  A  + ++           +  S  
Sbjct: 211 YMGAQDMERQALNVFRMRLLGAEVRGVHSGTATLKDATSEAIRDWVTNVETTHYILGSVA 270

Query: 253 GSLGIAISEAVEVATQNADTNIEQMKALGENPDVIIGCTGGGSNFAGLRFPPV----IRA 312
           G     +      A    +T  + ++  G  PDV++ C GGGSN  GL    V    +R 
Sbjct: 271 GPHPYPMMVRDFHAVIGKETRKQALEKWGGKPDVLVACVGGGSNAMGLFHEFVNDTEVRM 330

Query: 313 VEPEA----------CPSLTKGVYAYDYGDIAGTTPLMKMHTLGHNFIPDPIHVGGLRYH 372
           +  EA            +LTKG    D G + G    +     G    P  I   GL Y 
Sbjct: 331 IGVEAAGFGLDSGKHAATLTKG----DVGVLHGAMSYLLQDDDGQIIEPHSIS-AGLDYP 390

Query: 373 GIAPLISHVYNLGLLEAISLPQTECFRGAIQFARTEGIIPAPEPTHAIAATIREALHCRE 431
           G+ P  S   ++G  E  S+   E      + +R EGIIPA E +HA+A    E L C  
Sbjct: 391 GVGPEHSFFKDMGRAEYYSITDEEALEAFKRVSRLEGIIPALETSHALA--YLEKL-CPT 450

The following BLAST results are available for this feature:

BLAST of Sed0026912 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890851.1	1.8e-216	77.66	tryptophan synthase beta chain 2 [Benincasa hispida]	[more]
XP_022134316.1	4.0e-216	76.80	uncharacterized protein LOC111006607 [Momordica charantia]	[more]
XP_031741291.1	8.8e-216	76.80	uncharacterized protein LOC101219640 [Cucumis sativus]	[more]
XP_008459440.1	1.3e-214	76.18	PREDICTED: tryptophan synthase beta chain 2-like [Cucumis melo]	[more]
KAE8648956.1	7.7e-212	75.36	hypothetical protein Csa_007904 [Cucumis sativus]	[more]

BLAST of Sed0026912 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O67409	1.0e-126	53.88	Tryptophan synthase beta chain 2 OS=Aquifex aeolicus (strain VF5) OX=224324 GN=t...	[more]
O29028	6.3e-124	52.14	Tryptophan synthase beta chain 2 OS=Archaeoglobus fulgidus (strain ATCC 49558 / ...	[more]
Q8TL44	2.1e-119	50.00	Tryptophan synthase beta chain 2 OS=Methanosarcina acetivorans (strain ATCC 3539...	[more]
Q8Q001	1.0e-118	50.48	Tryptophan synthase beta chain 2 OS=Methanosarcina mazei (strain ATCC BAA-159 / ...	[more]
Q9WZ09	1.0e-110	50.48	Tryptophan synthase beta chain 2 OS=Thermotoga maritima (strain ATCC 43589 / DSM...	[more]

BLAST of Sed0026912 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BXI7	1.9e-216	76.80	Tryptophan synthase OS=Momordica charantia OX=3673 GN=LOC111006607 PE=3 SV=1	[more]
A0A0A0KUJ4	9.5e-216	76.59	Tryptophan synthase OS=Cucumis sativus OX=3659 GN=Csa_5G643330 PE=3 SV=1	[more]
A0A1S3CA62	6.2e-215	76.18	Tryptophan synthase OS=Cucumis melo OX=3656 GN=LOC103498574 PE=3 SV=1	[more]
A0A6J1JY44	4.3e-208	75.21	Tryptophan synthase OS=Cucurbita maxima OX=3661 GN=LOC111489338 PE=3 SV=1	[more]
A0A6J1FH74	1.6e-207	75.79	Tryptophan synthase OS=Cucurbita moschata OX=3662 GN=LOC111445435 PE=3 SV=1	[more]

BLAST of Sed0026912 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G38530.1	1.7e-180	67.96	tryptophan synthase beta type 2	[more]
AT5G28237.1	2.5e-22	28.62	Pyridoxal-5'-phosphate-dependent enzyme family protein	[more]
AT4G27070.1	7.1e-22	27.27	tryptophan synthase beta-subunit 2	[more]
AT5G54810.1	1.3e-20	27.61	tryptophan synthase beta-subunit 1	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036052	Tryptophan synthase beta subunit-like PLP-dependent enzyme	GENE3D	3.40.50.1100		coord: 112..423 e-value: 2.5E-63 score: 216.2
IPR036052	Tryptophan synthase beta subunit-like PLP-dependent enzyme	GENE3D	3.40.50.1100		coord: 94..255 e-value: 2.5E-63 score: 216.2
IPR036052	Tryptophan synthase beta subunit-like PLP-dependent enzyme	SUPERFAMILY	53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes	coord: 94..429
IPR023026	Tryptophan synthase beta chain/beta chain-like	PIRSF	PIRSF001413	Trp_syn_beta	coord: 54..436 e-value: 5.2E-84 score: 280.7
IPR001926	Pyridoxal-phosphate dependent enzyme	PFAM	PF00291	PALP	coord: 111..417 e-value: 2.2E-31 score: 109.4
None	No IPR available	PANTHER	PTHR48077	TRYPTOPHAN SYNTHASE-RELATED	coord: 24..259
None	No IPR available	PANTHER	PTHR48077:SF7	BNAA04G27890D PROTEIN	coord: 260..445
None	No IPR available	PANTHER	PTHR48077	TRYPTOPHAN SYNTHASE-RELATED	coord: 260..445
None	No IPR available	PANTHER	PTHR48077:SF7	BNAA04G27890D PROTEIN	coord: 24..259
IPR006653	Tryptophan synthase, beta chain, conserved site	PROSITE	PS00168	TRP_SYNTHASE_BETA	coord: 140..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0026912.1	Sed0026912.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000162	tryptophan biosynthetic process
biological_process	GO:0006568	tryptophan metabolic process
molecular_function	GO:0052684	L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity
molecular_function	GO:0030170	pyridoxal phosphate binding
molecular_function	GO:0004834	tryptophan synthase activity