Sed0026909 (gene) Chayote v1

Overview


Name	Sed0026909
Type	gene
Organism	Sechium edule (Chayote v1)
Description	LEA_2 domain-containing protein
Location	LG07: 12102183 .. 12104398 (+)
RNA-Seq Expression	Sed0026909
Synteny	Sed0026909

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCAAACCCCACGGCCACCACCACCACCACCCGCCGTCGGGCCGCACAAACCTAGCGTCCTGCATAGTCGCCACGATCTTCTTACTCTTCGTCATCATCGTCGTCCTCATCGTCTTCTTCACCGTCTTCAAGCCTCAGGATCCGAAGATCGCCGTCTCCGCCGTCCAGTTGCCGTCCTTCTCCGTCGCCAACGGCACCGTCAATTTCACCTTCTCTCAGTACGTCTCCGTCCAAAACCCTAACAAAGCCTCTTTCTCCCACTACGACAGCTCGCTCCAGCTCCTCTACTCCGGCTCTCAAATCGGATTCATGTTCATTCCCGCCGGTAAAATCGACGCCGGCCGGACGCAGTACATGGCGGCGACGTTCTCCGTTCAGTCGTTCCCGCTGACGGCGCCGGTCGCCGCCGTCGGAGCGGGGCCTACGTACTCGGAGGGAATGGACGGGTACAGAATCGGACCTACGCTGGAGATCGAATCGAAGATGGATTTGGCCGGTAGGGTTAGGGTTTTGCACTTCTTCACTCACCATGCGGAGGCTTCGTTGAGTTGCAGAGTCGCCATTGCTGTAAGTGATGGATCTGTGTTAGGTTTTCATTGCTAATTCATCATCTTCTTCTTCTTTAATTCTGGATAATTTATTCAGTTCGAGTGTAAAAAAAAAAAAAAAAAAAAAATCAAGGACTCCAAAATGATTTTGAGCTCTCTCTTTTCTCTGTTGAGTAATTTGTGGAATTGAATTGTAGAGTGTTCTGATCTTAGATTTTGTTTTGGATTAAGCTCTGTTCTGTTTCTGCACTCAAATTCATCAGAAATCTGTGTTTATTTTTGTGGATTTGTGATCATTTTTAGGGTAATTTTGATTCATAGGGATAAATCTATGGCTTTGAATCATAAAGTAATGTTGATCTGATCAAAGGATGATTGCAATTGAAACAAAGAACAAAGTTGGGATTATACTCATTTTCTTGGGACTTTTTTTTCAGCTTTTTTTTAAGTTAAACAGATTGGGCACTAAGCTAAGTTTATTAATTAATTTAAAGTTGCTTTTGGCTAAGGATTGAATATTAATGTTAGGCAGTTTGGATTTATTTGGGTCTTCATCTTTTGTTAAATTAAAAAAATTGTTGGCTTGTATTATTATGCATTCTTTTATGAATCATTAAAAAAAAGTTCTAAGATGTGGGTTTAAAAAAAGAAAAAAAAAAACTTGATGTCAAAATAAATAGATTCGTAACATATTGTATCACTACTTCGTAGATCAAAAGAAATTTGAATCCATTTCACAAATAAATAAATAAATGTTGAATCTGTCAAAGTGATAGGGAAAGCATAACAACCATTCATACAATTTCTTAAATTTAATAAGTTAGGTATGGTTACATAACTATTATTGTTTATGAAATTTAAGTTTATTTTTACAAAAAATTTTTTTACTGTGTTTCATATTTCTTACGATGTATTCATATTTTCTTAAAAAAGTAGGTGAATACTAACTAAATTTTAAAAACAAAAATAAGTTTTTGAAGTTATTTTTTTTATTTCCAAATTTTAGTTTTGTTTATTAAAATATAGGTAATATGTAAATATTTAAATAAGGAAAAAGATATAGTAGAGCAGTTGTTGTAGATTTAAATTTCATAAATAAAAAATGAAAAACAAAATGATTATAAAACGGAATCGTATTTAACACAGATTTTGTTTTTAAGCATAATGGGGCACCAAAAAAGTTGAAACAATGCCTCGATGAGATTTTCATATTTTTTTGAAACAAGATAACTATGCTCGTCCCTAGATCAGACATCAGAGACATCAAAAGAGTTTTGTTATAGGAAAGATTCGAACTCGGTACCTTGAGGAGAGCATACATTTACATTTAGGAAGATTCTATAATTAAAATATGGCAACTAACCTTTGTTATCTGTAACAAATTTTTTATAACAAACATTTGTTCTCTAACATTTGATATGAAAGGTGGAAAATAAAGTAAGGAAGTGGTTGAAAATTCAGATTGGTTTGAACTAATAACGTTAGAAAAAAAAACAAAAGGGAGTATGGGGACTGATTGCTAAGATTCTTCTACTAGAAAGTGGGACTCTCTAAACAAAAATAAAGTTTTGAAATTTGGATTTAACTCAGGCTGGAAATCGAGACGGCAACAGCTACCTAATTTCTCCGACCACCGCGGGTGGCGGAGACGGCGGCCGGCGATGA

mRNA sequence

ATGAGCAAACCCCACGGCCACCACCACCACCACCCGCCGTCGGGCCGCACAAACCTAGCGTCCTGCATAGTCGCCACGATCTTCTTACTCTTCGTCATCATCGTCGTCCTCATCGTCTTCTTCACCGTCTTCAAGCCTCAGGATCCGAAGATCGCCGTCTCCGCCGTCCAGTTGCCGTCCTTCTCCGTCGCCAACGGCACCGTCAATTTCACCTTCTCTCAGTACGTCTCCGTCCAAAACCCTAACAAAGCCTCTTTCTCCCACTACGACAGCTCGCTCCAGCTCCTCTACTCCGGCTCTCAAATCGGATTCATGTTCATTCCCGCCGGTAAAATCGACGCCGGCCGGACGCAGTACATGGCGGCGACGTTCTCCGTTCAGTCGTTCCCGCTGACGGCGCCGGTCGCCGCCGTCGGAGCGGGGCCTACGTACTCGGAGGGAATGGACGGGTACAGAATCGGACCTACGCTGGAGATCGAATCGAAGATGGATTTGGCCGGTAGGGTTAGGGTTTTGCACTTCTTCACTCACCATGCGGAGGCTTCGTTGAGTTGCAGAGTCGCCATTGCTGCTGGAAATCGAGACGGCAACAGCTACCTAATTTCTCCGACCACCGCGGGTGGCGGAGACGGCGGCCGGCGATGA

Coding sequence (CDS)

ATGAGCAAACCCCACGGCCACCACCACCACCACCCGCCGTCGGGCCGCACAAACCTAGCGTCCTGCATAGTCGCCACGATCTTCTTACTCTTCGTCATCATCGTCGTCCTCATCGTCTTCTTCACCGTCTTCAAGCCTCAGGATCCGAAGATCGCCGTCTCCGCCGTCCAGTTGCCGTCCTTCTCCGTCGCCAACGGCACCGTCAATTTCACCTTCTCTCAGTACGTCTCCGTCCAAAACCCTAACAAAGCCTCTTTCTCCCACTACGACAGCTCGCTCCAGCTCCTCTACTCCGGCTCTCAAATCGGATTCATGTTCATTCCCGCCGGTAAAATCGACGCCGGCCGGACGCAGTACATGGCGGCGACGTTCTCCGTTCAGTCGTTCCCGCTGACGGCGCCGGTCGCCGCCGTCGGAGCGGGGCCTACGTACTCGGAGGGAATGGACGGGTACAGAATCGGACCTACGCTGGAGATCGAATCGAAGATGGATTTGGCCGGTAGGGTTAGGGTTTTGCACTTCTTCACTCACCATGCGGAGGCTTCGTTGAGTTGCAGAGTCGCCATTGCTGCTGGAAATCGAGACGGCAACAGCTACCTAATTTCTCCGACCACCGCGGGTGGCGGAGACGGCGGCCGGCGATGA

Protein sequence

MSKPHGHHHHHPPSGRTNLASCIVATIFLLFVIIVVLIVFFTVFKPQDPKIAVSAVQLPSFSVANGTVNFTFSQYVSVQNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDAGRTQYMAATFSVQSFPLTAPVAAVGAGPTYSEGMDGYRIGPTLEIESKMDLAGRVRVLHFFTHHAEASLSCRVAIAAGNRDGNSYLISPTTAGGGDGGRR

Homology

[Close]

BLAST of Sed0026909 vs. NCBI nr
Match: KAG6600511.1 (hypothetical protein SDJN03_05744, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 351.3 bits (900), Expect = 5.9e-93
Identity = 185/219 (84.47%), Postives = 193/219 (88.13%), Query Frame = 0


Query: 7   HHHHHPPSGRTNLASCIVATIFLLFVIIVVLIVFFTVFKPQDPKIAVSAVQLPSFSVANG 66
           HH HHPPSGRTNLASCIVATIFL+FVIIVVLIVFFTVFKPQDPKIAVSAVQLPSFSVANG
Sbjct: 4   HHDHHPPSGRTNLASCIVATIFLIFVIIVVLIVFFTVFKPQDPKIAVSAVQLPSFSVANG 63

Query: 67  TVNFTFSQYVSVQNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDAGRTQYMAATFSV 126
           TVNFTFSQYVSV+NPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKID+G+TQYMAATFSV
Sbjct: 64  TVNFTFSQYVSVRNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDSGQTQYMAATFSV 123

Query: 127 QSFPLTAPVAAVGAGPTYSEGMDGYRIGPTLEIESKMDLAGRVRVLHFFTHHAEASLSCR 186
           QSFPL APV A+GAGPTYSEGM+GYRIGPTLEIESKMD+AGRVRVLHFFTHH EA+LSCR
Sbjct: 124 QSFPLAAPVTAIGAGPTYSEGMNGYRIGPTLEIESKMDMAGRVRVLHFFTHHVEATLSCR 183

Query: 187 VAIA---------AGNRDGNSYLISP------TTAGGGD 211
           VAIA          GNRDGN    SP      T  GGGD
Sbjct: 184 VAIAVSDGSVLAVGGNRDGNREKSSPTKGVAETAVGGGD 222

[Close]

BLAST of Sed0026909 vs. NCBI nr
Match: XP_022982486.1 (uncharacterized protein LOC111481290 [Cucurbita maxima])

HSP 1 Score: 341.3 bits (874), Expect = 6.1e-90
Identity = 172/187 (91.98%), Postives = 181/187 (96.79%), Query Frame = 0


Query: 7   HHHHHPPSGRTNLASCIVATIFLLFVIIVVLIVFFTVFKPQDPKIAVSAVQLPSFSVANG 66
           HH HHPPSGRTNLASCIVATIFL+FVIIVVLIVFFTVFKPQDPKIAVSAVQLPSFSVANG
Sbjct: 46  HHDHHPPSGRTNLASCIVATIFLIFVIIVVLIVFFTVFKPQDPKIAVSAVQLPSFSVANG 105

Query: 67  TVNFTFSQYVSVQNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDAGRTQYMAATFSV 126
           TVNFTFSQYVSV+NPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKID+G+TQYMAATFSV
Sbjct: 106 TVNFTFSQYVSVRNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDSGQTQYMAATFSV 165

Query: 127 QSFPLTAPVAAVGAGPTYSEGMDGYRIGPTLEIESKMDLAGRVRVLHFFTHHAEASLSCR 186
           QSFPL APV A+GAGPTYSEGM+GYRIGPTLEIESKMD+AGRVRVLHFFTHH EA+LSCR
Sbjct: 166 QSFPLAAPVTAIGAGPTYSEGMNGYRIGPTLEIESKMDMAGRVRVLHFFTHHVEATLSCR 225

Query: 187 VAIAAGN 194
           VAIA  +
Sbjct: 226 VAIAVSD 232

[Close]

BLAST of Sed0026909 vs. NCBI nr
Match: XP_022941606.1 (uncharacterized protein LOC111446913 [Cucurbita moschata] >KAG7031150.1 hypothetical protein SDJN02_05189, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 341.3 bits (874), Expect = 6.1e-90
Identity = 172/187 (91.98%), Postives = 181/187 (96.79%), Query Frame = 0


Query: 7   HHHHHPPSGRTNLASCIVATIFLLFVIIVVLIVFFTVFKPQDPKIAVSAVQLPSFSVANG 66
           HH HHPPSGRTNLASCIVATIFL+FVIIVVLIVFFTVFKPQDPKIAVSAVQLPSFSVANG
Sbjct: 4   HHDHHPPSGRTNLASCIVATIFLIFVIIVVLIVFFTVFKPQDPKIAVSAVQLPSFSVANG 63

Query: 67  TVNFTFSQYVSVQNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDAGRTQYMAATFSV 126
           TVNFTFSQYVSV+NPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKID+G+TQYMAATFSV
Sbjct: 64  TVNFTFSQYVSVRNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDSGQTQYMAATFSV 123

Query: 127 QSFPLTAPVAAVGAGPTYSEGMDGYRIGPTLEIESKMDLAGRVRVLHFFTHHAEASLSCR 186
           QSFPL APV A+GAGPTYSEGM+GYRIGPTLEIESKMD+AGRVRVLHFFTHH EA+LSCR
Sbjct: 124 QSFPLAAPVTAIGAGPTYSEGMNGYRIGPTLEIESKMDMAGRVRVLHFFTHHVEATLSCR 183

Query: 187 VAIAAGN 194
           VAIA  +
Sbjct: 184 VAIAVSD 190

[Close]

BLAST of Sed0026909 vs. NCBI nr
Match: XP_023525568.1 (uncharacterized protein LOC111789137 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 339.7 bits (870), Expect = 1.8e-89
Identity = 171/187 (91.44%), Postives = 180/187 (96.26%), Query Frame = 0


Query: 7   HHHHHPPSGRTNLASCIVATIFLLFVIIVVLIVFFTVFKPQDPKIAVSAVQLPSFSVANG 66
           HH HHPPSGRTNLASCIVATIFL+FVIIVVLIVFFTVFKPQDPKIAVSAVQLPSFSVANG
Sbjct: 4   HHDHHPPSGRTNLASCIVATIFLIFVIIVVLIVFFTVFKPQDPKIAVSAVQLPSFSVANG 63

Query: 67  TVNFTFSQYVSVQNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDAGRTQYMAATFSV 126
           TVNFTFSQYVSV+NPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKID+G+TQYMAATFSV
Sbjct: 64  TVNFTFSQYVSVRNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDSGQTQYMAATFSV 123

Query: 127 QSFPLTAPVAAVGAGPTYSEGMDGYRIGPTLEIESKMDLAGRVRVLHFFTHHAEASLSCR 186
           QSFPL AP  A+GAGPTYSEGM+GYRIGPTLEIESKMD+AGRVRVLHFFTHH EA+LSCR
Sbjct: 124 QSFPLAAPATAIGAGPTYSEGMNGYRIGPTLEIESKMDMAGRVRVLHFFTHHVEATLSCR 183

Query: 187 VAIAAGN 194
           VAIA  +
Sbjct: 184 VAIAVSD 190

[Close]

BLAST of Sed0026909 vs. NCBI nr
Match: XP_038899581.1 (uncharacterized protein LOC120086842 [Benincasa hispida])

HSP 1 Score: 333.6 bits (854), Expect = 1.3e-87
Identity = 168/193 (87.05%), Postives = 182/193 (94.30%), Query Frame = 0


Query: 1   MSKPHGHHHHHPPSGRTNLASCIVATIFLLFVIIVVLIVFFTVFKPQDPKIAVSAVQLPS 60
           MSKPHG   HHPPSGRTNLASCIVAT+FL+F++I+VLIVFFTVFKPQDPKIAVSAVQLPS
Sbjct: 1   MSKPHG---HHPPSGRTNLASCIVATVFLIFLVIIVLIVFFTVFKPQDPKIAVSAVQLPS 60

Query: 61  FSVANGTVNFTFSQYVSVQNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDAGRTQYM 120
           FSVANG++NFTFSQYVSV+NPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDAG+TQYM
Sbjct: 61  FSVANGSINFTFSQYVSVRNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDAGQTQYM 120

Query: 121 AATFSVQSFPLTAPVAAVGAGPTYSEGMDGYRIGPTLEIESKMDLAGRVRVLHFFTHHAE 180
           AATFSVQSF L APVAAVGAGPT+SEGM+GYRIGPTLEIESKMD+ GRVRVLHFFTHH E
Sbjct: 121 AATFSVQSFSLAAPVAAVGAGPTFSEGMNGYRIGPTLEIESKMDMVGRVRVLHFFTHHVE 180

Query: 181 ASLSCRVAIAAGN 194
            + SCRVAIA  +
Sbjct: 181 VTSSCRVAIAVSD 190

[Close]

BLAST of Sed0026909 vs. ExPASy TrEMBL
Match: A0A6J1IZG6 (uncharacterized protein LOC111481290 OS=Cucurbita maxima OX=3661 GN=LOC111481290 PE=4 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 3.0e-90
Identity = 172/187 (91.98%), Postives = 181/187 (96.79%), Query Frame = 0


Query: 7   HHHHHPPSGRTNLASCIVATIFLLFVIIVVLIVFFTVFKPQDPKIAVSAVQLPSFSVANG 66
           HH HHPPSGRTNLASCIVATIFL+FVIIVVLIVFFTVFKPQDPKIAVSAVQLPSFSVANG
Sbjct: 46  HHDHHPPSGRTNLASCIVATIFLIFVIIVVLIVFFTVFKPQDPKIAVSAVQLPSFSVANG 105

Query: 67  TVNFTFSQYVSVQNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDAGRTQYMAATFSV 126
           TVNFTFSQYVSV+NPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKID+G+TQYMAATFSV
Sbjct: 106 TVNFTFSQYVSVRNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDSGQTQYMAATFSV 165

Query: 127 QSFPLTAPVAAVGAGPTYSEGMDGYRIGPTLEIESKMDLAGRVRVLHFFTHHAEASLSCR 186
           QSFPL APV A+GAGPTYSEGM+GYRIGPTLEIESKMD+AGRVRVLHFFTHH EA+LSCR
Sbjct: 166 QSFPLAAPVTAIGAGPTYSEGMNGYRIGPTLEIESKMDMAGRVRVLHFFTHHVEATLSCR 225

Query: 187 VAIAAGN 194
           VAIA  +
Sbjct: 226 VAIAVSD 232

[Close]

BLAST of Sed0026909 vs. ExPASy TrEMBL
Match: A0A6J1FLK4 (uncharacterized protein LOC111446913 OS=Cucurbita moschata OX=3662 GN=LOC111446913 PE=4 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 3.0e-90
Identity = 172/187 (91.98%), Postives = 181/187 (96.79%), Query Frame = 0


Query: 7   HHHHHPPSGRTNLASCIVATIFLLFVIIVVLIVFFTVFKPQDPKIAVSAVQLPSFSVANG 66
           HH HHPPSGRTNLASCIVATIFL+FVIIVVLIVFFTVFKPQDPKIAVSAVQLPSFSVANG
Sbjct: 4   HHDHHPPSGRTNLASCIVATIFLIFVIIVVLIVFFTVFKPQDPKIAVSAVQLPSFSVANG 63

Query: 67  TVNFTFSQYVSVQNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDAGRTQYMAATFSV 126
           TVNFTFSQYVSV+NPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKID+G+TQYMAATFSV
Sbjct: 64  TVNFTFSQYVSVRNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDSGQTQYMAATFSV 123

Query: 127 QSFPLTAPVAAVGAGPTYSEGMDGYRIGPTLEIESKMDLAGRVRVLHFFTHHAEASLSCR 186
           QSFPL APV A+GAGPTYSEGM+GYRIGPTLEIESKMD+AGRVRVLHFFTHH EA+LSCR
Sbjct: 124 QSFPLAAPVTAIGAGPTYSEGMNGYRIGPTLEIESKMDMAGRVRVLHFFTHHVEATLSCR 183

Query: 187 VAIAAGN 194
           VAIA  +
Sbjct: 184 VAIAVSD 190

[Close]

BLAST of Sed0026909 vs. ExPASy TrEMBL
Match: A0A0A0KX26 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G052640 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 1.1e-87
Identity = 167/193 (86.53%), Postives = 182/193 (94.30%), Query Frame = 0


Query: 1   MSKPHGHHHHHPPSGRTNLASCIVATIFLLFVIIVVLIVFFTVFKPQDPKIAVSAVQLPS 60
           M  PHG H  HPPSGRTNLASC+VAT+FL+F+IIV+LIVFFTVFKPQDPKIAVSAVQLPS
Sbjct: 1   MGNPHG-HGDHPPSGRTNLASCVVATVFLIFLIIVILIVFFTVFKPQDPKIAVSAVQLPS 60

Query: 61  FSVANGTVNFTFSQYVSVQNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDAGRTQYM 120
           FSVANGT+NFTFSQYVSV+NPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDAG+TQYM
Sbjct: 61  FSVANGTINFTFSQYVSVKNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDAGQTQYM 120

Query: 121 AATFSVQSFPLTAPVAAVGAGPTYSEGMDGYRIGPTLEIESKMDLAGRVRVLHFFTHHAE 180
           AATFSVQSFPL APVA+VGAGPT+SEGM+GYR+GP LEIESKMD+AGRVRVLHFFTHH E
Sbjct: 121 AATFSVQSFPLAAPVASVGAGPTFSEGMNGYRVGPILEIESKMDMAGRVRVLHFFTHHVE 180

Query: 181 ASLSCRVAIAAGN 194
           A+ SCRVAIA  +
Sbjct: 181 ATSSCRVAIAVSD 192

[Close]

BLAST of Sed0026909 vs. ExPASy TrEMBL
Match: A0A5D3D1L2 (Proline-rich receptor-like protein kinase PERK3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003970 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 3.0e-82
Identity = 157/182 (86.26%), Postives = 173/182 (95.05%), Query Frame = 0


Query: 12  PPSGRTNLASCIVATIFLLFVIIVVLIVFFTVFKPQDPKIAVSAVQLPSFSVANGTVNFT 71
           PPSGRTNLASC+VAT+FL+F+IIV+LIVFFTVFKPQDPKIAVSAVQLPSFSV NGT+NFT
Sbjct: 11  PPSGRTNLASCVVATVFLIFLIIVILIVFFTVFKPQDPKIAVSAVQLPSFSVTNGTINFT 70

Query: 72  FSQYVSVQNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDAGRTQYMAATFSVQSFPL 131
           FSQYVSV+NPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKI+AG+TQYMAATFSVQSFPL
Sbjct: 71  FSQYVSVKNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIEAGQTQYMAATFSVQSFPL 130

Query: 132 TAPVAAVGAGPTYSEGMDGYRIGPTLEIESKMDLAGRVRVLHFFTHHAEASLSCRVAIAA 191
            +PVAAVGAGPT+S GM+GYR+GP LEIESKMD+AGRVRVL+FFTHH EA  SCRVAIA 
Sbjct: 131 ASPVAAVGAGPTFSGGMNGYRVGPILEIESKMDMAGRVRVLNFFTHHVEAISSCRVAIAV 190

Query: 192 GN 194
            +
Sbjct: 191 SD 192

[Close]

BLAST of Sed0026909 vs. ExPASy TrEMBL
Match: A0A1S3BSP1 (uncharacterized protein LOC103493106 OS=Cucumis melo OX=3656 GN=LOC103493106 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 3.0e-82
Identity = 157/182 (86.26%), Postives = 173/182 (95.05%), Query Frame = 0


Query: 12  PPSGRTNLASCIVATIFLLFVIIVVLIVFFTVFKPQDPKIAVSAVQLPSFSVANGTVNFT 71
           PPSGRTNLASC+VAT+FL+F+IIV+LIVFFTVFKPQDPKIAVSAVQLPSFSV NGT+NFT
Sbjct: 11  PPSGRTNLASCVVATVFLIFLIIVILIVFFTVFKPQDPKIAVSAVQLPSFSVTNGTINFT 70

Query: 72  FSQYVSVQNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDAGRTQYMAATFSVQSFPL 131
           FSQYVSV+NPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKI+AG+TQYMAATFSVQSFPL
Sbjct: 71  FSQYVSVKNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIEAGQTQYMAATFSVQSFPL 130

Query: 132 TAPVAAVGAGPTYSEGMDGYRIGPTLEIESKMDLAGRVRVLHFFTHHAEASLSCRVAIAA 191
            +PVAAVGAGPT+S GM+GYR+GP LEIESKMD+AGRVRVL+FFTHH EA  SCRVAIA 
Sbjct: 131 ASPVAAVGAGPTFSGGMNGYRVGPILEIESKMDMAGRVRVLNFFTHHVEAISSCRVAIAV 190

Query: 192 GN 194
            +
Sbjct: 191 SD 192

[Close]

BLAST of Sed0026909 vs. TAIR 10
Match: AT1G64450.1 (Glycine-rich protein family )

HSP 1 Score: 196.8 bits (499), Expect = 1.7e-50
Identity = 126/334 (37.72%), Postives = 159/334 (47.60%), Query Frame = 0


Query: 1   MSKPHGHHHHHPPSGRTNLASCIVATIFLLFVIIVVLIVFFTVFKPQDPKIAVSAVQLPS 60
           M+KPH        SGRTNLASC VAT+FLL +++V+L+V+FTVFKP+DPKI+V+AVQLPS
Sbjct: 1   MAKPHDRRR---SSGRTNLASCAVATVFLLILLVVLLVVYFTVFKPKDPKISVNAVQLPS 60

Query: 61  FSVANGTVNFTFSQYVSVQNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDAGRTQYM 120
           F+V+N T NF+FSQYV+V+NPN+A FSHYDSS+QLLYSG+Q+GFMFIPAGKID+GR QYM
Sbjct: 61  FAVSNNTANFSFSQYVAVRNPNRAVFSHYDSSIQLLYSGNQVGFMFIPAGKIDSGRIQYM 120

Query: 121 AATFSVQSFPLTAPVAAV------------------------------------------ 180
           AATF+V SFP++ P ++                                           
Sbjct: 121 AATFTVHSFPISPPSSSAISTVSAAVIPDSPIIPGPPDFTVTPRNPDSPYFPGYPESPDL 180

Query: 181 ------------------------------------------------------------ 191
                                                                       
Sbjct: 181 PGNPGSPDFSGNPGPPSFPRNPGSPEFPGNPGAPIIPRNPGSPEFPINPPRNPGAPVIPR 240

[Close]

BLAST of Sed0026909 vs. TAIR 10
Match: AT4G23930.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 189.9 bits (481), Expect = 2.1e-48
Identity = 95/177 (53.67%), Postives = 141/177 (79.66%), Query Frame = 0


Query: 17  TNLASCIVATIFLLFVIIVVLIVFFTVFKPQDPKIAVSAVQLPSFSVANGTVNFTFSQYV 76
           +NLASC VAT+F++F+II  L V+ TVF+P+DP+I+V++V++PSFSVAN +V+FTFSQ+ 
Sbjct: 6   SNLASCAVATLFIVFLIIAALTVYLTVFRPRDPEISVTSVKVPSFSVANSSVSFTFSQFS 65

Query: 77  SVQNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDAGRTQYMAATFSVQSFPLTAPVA 136
           +V+NPN+A+FSHY++ +QL Y G++IG+ F+PAG+I++GRT+ M ATFSVQSFPL    A
Sbjct: 66  AVRNPNRAAFSHYNNVIQLFYYGNRIGYTFVPAGEIESGRTKRMLATFSVQSFPL---AA 125

Query: 137 AVGAGPTYSEGMDGYRIGPTLEIESKMDLAGRVRVLHFFTHHAEASLSCRVAIAAGN 194
           A  +  + ++  +  R G T+EIESK+++AGRVRVL  FTH   A  +CR+AI++ +
Sbjct: 126 ASSSQISAAQFQNSDRSGSTVEIESKLEMAGRVRVLGLFTHRIAAKCNCRIAISSSD 179

[Close]

BLAST of Sed0026909 vs. TAIR 10
Match: AT4G23930.2 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 139.8 bits (351), Expect = 2.5e-33
Identity = 79/177 (44.63%), Postives = 116/177 (65.54%), Query Frame = 0


Query: 17  TNLASCIVATIFLLFVIIVVLIVFFTVFKPQDPKIAVSAVQLPSFSVANGTVNFTFSQYV 76
           +NLASC VAT+F++F+II  L V+ TVF+P+DP+I+V++V++PSFSVAN +         
Sbjct: 6   SNLASCAVATLFIVFLIIAALTVYLTVFRPRDPEISVTSVKVPSFSVANSS--------- 65

Query: 77  SVQNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDAGRTQYMAATFSVQSFPLTAPVA 136
                             L Y G++IG+ F+PAG+I++GRT+ M ATFSVQSFPL    A
Sbjct: 66  ------------------LFYYGNRIGYTFVPAGEIESGRTKRMLATFSVQSFPL---AA 125

Query: 137 AVGAGPTYSEGMDGYRIGPTLEIESKMDLAGRVRVLHFFTHHAEASLSCRVAIAAGN 194
           A  +  + ++  +  R G T+EIESK+++AGRVRVL  FTH   A  +CR+AI++ +
Sbjct: 126 ASSSQISAAQFQNSDRSGSTVEIESKLEMAGRVRVLGLFTHRIAAKCNCRIAISSSD 152

[Close]

BLAST of Sed0026909 vs. TAIR 10
Match: AT3G54200.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 63.2 bits (152), Expect = 3.0e-10
Identity = 53/190 (27.89%), Postives = 95/190 (50.00%), Query Frame = 0


Query: 16  RTNLASCIVATIFLLFVI-IVVLIVFFTVFKPQDPKIAVSAVQLPSFSVA------NGTV 75
           + N   CI  TI L+ +I IV++I+ FT+FKP+ P   + +V +     +         +
Sbjct: 48  KRNCKICICFTILLILLIAIVIVILAFTLFKPKRPTTTIDSVTVDRLQASVNPLLLKVLL 107

Query: 76  NFTFSQYVSVQNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDAGRTQYMAATFSVQS 135
           N T +  +S++NPN+  FS+  SS  L Y G  IG   +PA +I A +T  +  T ++ +
Sbjct: 108 NLTLNVDLSLKNPNRIGFSYDSSSALLNYRGQVIGEAPLPANRIAARKTVPLNITLTLMA 167

Query: 136 FPLTAPVAAVGAGPTYSEGMDGYRIGPTLEIESKMDLAGRVRVLHFFTHHAEASLSCRVA 195
             L +    +      S+ M G      + + + + + G+V VL  F    ++S SC ++
Sbjct: 168 DRLLSETQLL------SDVMAG-----VIPLNTFVKVTGKVTVLKIFKIKVQSSSSCDLS 226

Query: 196 IAAGNRDGNS 199
           I+  +R+  S
Sbjct: 228 ISVSDRNVTS 226

[Close]

BLAST of Sed0026909 vs. TAIR 10
Match: AT2G46150.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 57.8 bits (138), Expect = 1.3e-08
Identity = 47/186 (25.27%), Postives = 81/186 (43.55%), Query Frame = 0


Query: 11  HPPSGRTNLASCIVATIFLLFVIIVVLIVFFTVFKPQDPKIAVSAVQLPSFSVANGT--- 70
           H    R   + C+ AT  +L  I++ L+  FTVF+ +DP I ++ V +       GT   
Sbjct: 30  HRSRNRIKCSICVTATSLILTTIVLTLV--FTVFRVKDPIIKMNGVMVNGLDSVTGTNQV 89

Query: 71  ----VNFTFSQYVSVQNPNKASFSHYDSSLQLLYSGSQIGFMFIPAGKIDAGRTQYMAAT 130
                N +    VSV+NPN ASF + +++  + Y G+ +G      GK    RT  M  T
Sbjct: 90  QLLGTNISMIVDVSVKNPNTASFKYSNTTTDIYYKGTLVGEAHGLPGKARPHRTSRMNVT 149

Query: 131 FSVQSFPLTAPVAAVGAGPTYSEGMDGYRIGPTLEIESKMDLAGRVRVLHFFTHHAEASL 190
             +    L   ++  G G   S           + + S   + G+V+++     H    +
Sbjct: 150 VDIM---LDRILSDPGLGREISR-------SGLVNVWSYTRVGGKVKIMGIVKKHVTVKM 203

The following BLAST results are available for this feature:

BLAST of Sed0026909 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6600511.1	5.9e-93	84.47	hypothetical protein SDJN03_05744, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022982486.1	6.1e-90	91.98	uncharacterized protein LOC111481290 [Cucurbita maxima]	[more]
XP_022941606.1	6.1e-90	91.98	uncharacterized protein LOC111446913 [Cucurbita moschata] >KAG7031150.1 hypothet...	[more]
XP_023525568.1	1.8e-89	91.44	uncharacterized protein LOC111789137 [Cucurbita pepo subsp. pepo]	[more]
XP_038899581.1	1.3e-87	87.05	uncharacterized protein LOC120086842 [Benincasa hispida]	[more]

BLAST of Sed0026909 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0026909 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IZG6	3.0e-90	91.98	uncharacterized protein LOC111481290 OS=Cucurbita maxima OX=3661 GN=LOC111481290...	[more]
A0A6J1FLK4	3.0e-90	91.98	uncharacterized protein LOC111446913 OS=Cucurbita moschata OX=3662 GN=LOC1114469...	[more]
A0A0A0KX26	1.1e-87	86.53	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G052640 PE=4 ...	[more]
A0A5D3D1L2	3.0e-82	86.26	Proline-rich receptor-like protein kinase PERK3 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3BSP1	3.0e-82	86.26	uncharacterized protein LOC103493106 OS=Cucumis melo OX=3656 GN=LOC103493106 PE=...	[more]

BLAST of Sed0026909 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64450.1	1.7e-50	37.72	Glycine-rich protein family	[more]
AT4G23930.1	2.1e-48	53.67	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT4G23930.2	2.5e-33	44.63	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G54200.1	3.0e-10	27.89	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT2G46150.1	1.3e-08	25.27	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 76..185 e-value: 4.3E-9 score: 36.8
None	No IPR available	PANTHER	PTHR31852:SF22	OS05G0238400 PROTEIN	coord: 10..194
None	No IPR available	PANTHER	PTHR31852	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 10..194
None	No IPR available	SUPERFAMILY	117070	LEA14-like	coord: 30..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0026909.1	Sed0026909.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane