Sed0026896 (gene) Chayote v1

Overview


Name	Sed0026896
Type	gene
Organism	Sechium edule (Chayote v1)
Description	snRNA-activating protein complex subunit
Location	LG01: 14450189 .. 14457905 (+)
RNA-Seq Expression	Sed0026896
Synteny	Sed0026896

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAGGTAAACAAAAAGCCGTAACTTCTCAGCACAGCCGCCCCTTTCTCACGCATCTCTTTTTCAGTCTCTTCATCGCTTTCTCTCTGTATGCAAACCTATTTTCTGTGCTATTCATCTTCGATGACTCTTAGATAGTAAAAAAGGTATGATTTTTTTTTTGAATCGTTCCGATACGCAGGTGAATCGTTTCTTTTTAACTCTGAAAACGTCCGATTCGGGCGAAATTACGATGTGAATCGATTTCTTCACGATTCGTTTCGAATCGTGCATTTTTGTTGGAGATACTAACTTGTGGTGCAATTGGTAGGTGAGGATTCTTCAACACATATACAAGGGATATGAGTTACTCTCCTCGTTATCAATTGATTTTGTGGAACCCCATATTCTCTGTTTTTGATAATCTTGCTTGTGCTCGTCCCAAAGCCTCGACTCAAGAGACAGCAAAATATTTTACAATTGGGTTTCGAACCTGAGACCTAGAGCATACTTGAAGACAGTAAGTTTCTACGAACGAGGCTGCCATTTGGGGATCATTTCGAACGAGCATCTAATCAACCATTCCGGGTCAAGAAACTGCTTAAGTATTTGGAAGGAGGAGAGCCATGGAGGCAAGAAGCGCGGCGGGCGCCTCGGAGGAGTTGACTCTCAATGGCAATGGCAATGGCAATGGCCTCTCAATTCCCTTGGGGGGGCCTCTATATGCATCCAATTTGGTTGGTCCTCTCACCAGGGTCCCTCACTTTGAGTCTTCTCTTCTTCAGGAACTTCAGGTTCTGTATATTCATTTCCATCTTTCTCATGTTTTGACCCCTTTGTTTCTGTTTCTAATCCTTAACTTGTTTTTAGCAGAGTCTGGAGGCACAGTTACACTTGGATTCATCTCAACTATGTGATGAACATATTTCGTATGCATGTTTTTCACTCTTATTAATGTGCTCTGGTTTGTTTTGTCACGGTTGGATTAGTTAACTTGCAATTTCTGTTCTGCAGGGTCGATGAGCTTATGGTGTATACTGAAGAACAGTTATTGAATATGGCTTTGGAGGAATCATCTCAGGTTCGTGAACTGAGTGTCTCGTCTTCGTCTCATCTAGTAAATTGCTATTAAAAGAGAACACTTGCGTTAATTTTTCATCTGCTGTACTGATGATGCAGAGTGATGAGAGTGCTAAAAACCAGCCAAAACTTCCAGAAGAAATTATGAATGCAGGAGAGGCGAGGTATTTGATTTTAGTTGTTATTTTCTATTTCAATAAACTGATATAAGTCTAAACAGATACAACATTACAATGCCCATAAAACCTTCGTATAGTTTTTGTGGAAGGTAGTCATTGTAAATCAGTAAAAGGGACCAAAGAAGCTGATAAAAGAAGAATCAAATTTGGTTTATGAAGTTAAATGATGCAAAGCTGAAAATATTAGTATGTTGGTGTTCTTATCTACAAAGAGGAACCATCTTTACTTGTTGTGGCATCCTATATGGTATTGTAGGACCAAAATGTCAAAAGACAGCTACCAAGGTTCTAGAAGCAAGCTTCCTTGCAAATTACTTTTTATAGGGTAGAATTCATATGGCCAACAAGATCAATAGCCCAACCCGCTTTAGTGTATGCCTATGACCAAGAAGTCATGAGTGTGAATCCTTACTCCCGATTGTTGATAAGCTAAAAAAGGGTAGAATTCAATTCATATGAACAGGTCTAAAATTGTTATTGTTTAGAAACCTTTCTTCAAAATAGTTAAACAATATTGTTAAATATATTCTTTTTTATTAATGAATAAATATATTTATTTTTATAGAAAAAGTTAATTAACTATAGGTTCATTTAGACTTGGGCATATTTATATAATAGATAAGAAACAATTTCATTGATTTATGAAGTTACAAAATAAAGTAGCCCTCGTAGGAGATATTACAAGAGACCACTCCAATTAGATTGGAGAGTGATAAAAATATAACAATGGAAAATAAGCAAGAGTTCACACCATGTAACGATCAAGTTAACTATAGTATAAAAAAAAGGCGAAATGTTGATTCCTTATCTTAAAAGATTCTTCTAGTACGTTCTTTCCGAATGCTCCAACAAAAAGCCCTGATAAAGTTTTTCCCTAAAATCTTCTTTTCCTTCTAGAAAAGGTGCCCACCAAGCATGCTTGTGTAAAGAATGAGTGTGCCGATGGGAGGGCTATGTGCCAATTAAAAGCTTCAAACAGTATTCTTTCTTTTTGCCAAAGTGCAATAAATCAATAAATGAGGTTGAGACTCCAAGCTTTCTTTGCAAATAGTGCTCCATTGTAAGGATAGAACCAAGTGGCCGTGCGGCAACCATCTATGTAGCTTGTCATGGATGGTAATAGCTCCTACAGGCTACAGGTGAAATTTAATCTTCTTTGTATACTAGGCCTTCCAAATGAATTCGTATATAGTAGTAGGCTGATCAACATTGTGTAGAGAGATGTCCTGCAATTGTGACTTCGTGGTGAAAGACCCATGTGGTTCCAATTTCAAAACTCACCCAGCTGGAAAAAGATCGAATCAATGCACTGCATAACAGCGCCATATCTTCTATTTCTTCATCCTCTAAATTCCTTCTTGGCCTCATATCCCAAAAATGTAGTTCTGAGTCCCATATTTCATTCACTGAAGCTTCTTTCTTTAGAGATAACTCATTTATAAGAGGGAAGGCTTTGTACCTAAGATTAGACTTGCACATAAGCTTGAGTTATATGCAAGTTTTTACTATTTTAGTATTCTATTTTCTAAATTGTCCATTTTCCTTCATACTGTTTTTGGTAAAAAAGTTCATTAATTCTTTTGGGGAAAAATGGTATTCTTAGAGCAGATGAAGAGAAAGTTCATGCTCACAATCTGGAGATTGTCCCTGCATCAAATGCCAACAGAAATACAAATAAGACGGCTGCACGGAAGCGAAAAAAGGAGGATGTTTCTAATATTGAGGTGGGCTGCTCATCTTGTGTGTTATAATTTAATCATTTTATGATGGCAAAATATTCTGCAAGTGTTAAAAAGACAGTTCAGGACATTAAATGCTTATGGGTTATCTTGACTCCTAATGTTAAGGTTAGACCAGGTGTGCAAAAACTGGCTTGGATGACCAAGGTCTTAGAAAAATGAATAAATGGTCACATATACTTTGAATTCACATTTTGCTCTCAGTTGTGTTTAAGTTGTTTTCACTCTCCTTTCGTGGTTTTTTTTTTGTTACTGTGTTGTTACTGGATTATTGAGCCCCGTTCTCTTATTGGCTTTTTCACATTCAAGCATGTCGGTTATTCAAAATAATTGTAATCTTGTGCTTAATTATTATTTTTAATACCTTTTCTCTATCAATTTCTGTAAGAATTTCTGTTAAATGGGATTTCTAATTACGCTAATATAATTTCAGGGTAATTCTCTGGCAAGGGTGGCTGAAATTTTAAAAATTAAACAAAAGCAGGAAGCAGACAGAGCTGCAGTGAAATTGCATGCTTTCAAGTTTGTACAATTATTTAAAAAGATCCCTTTCATGATATGTGTTGTTTATAATATGTCAGGGGATTATGATTCTTATGTTTAGAATTCTTTTTGGCAGGTGGAAGAAGGAAATTGCCTGTTCATCATCAGAAAACAAAGAAAGGTTGAAGTCCTTGAGGTCTACGAATCCTTCTGCAAAGGGTCCTCAAGTAGGGTTTCTCTCTGTTATTATTATCCTAATTATCATCATCATTACCTTTTGTCTTTCTACTGACTAGACCAATAATAAGATTAATCATTAATTAAAGCTTGAAGATTCATCGATTGCCTGCTTGAGTGACATATGTCTGTTTATATCTGTAAATGGTAATTTTGGAGTCTTTGTCTACCTGGCCAGAGGTTGTTTGATATTATTTCACTTCCAAACAATGGTGATGTAGTCATTAGTAGGCTTAGTTCTTCATTAAATAGTGAAGATGGAGTTGCCCTTATTAATCTTACCGTATTTGTGATTGTAGTTTTTTTTTTAAAATGGAAATAGTCGACTGGGAAGCCTCTTTTGGGCAAGCAACTCAAACAAGTGTGAAAATGCCCGTAAGAAAGTATTAGCTTTCTAGTTGATCTGTTAGGTTCTATGTGGAGTTTGAATCATCCAGAAGACTCAGCCAAGCAATTTGAGATGGAATGGAACCTCTAAGGTGCTAGAGAGTTCTGATAATGAGTTTCGTGGAACGGTCTTCGTACGGGCACGAGTGCCCAAGTATAGGGAGCAAAGTTACGATTTCCCGGTGTCATAAAAAAAAAGAAAAAGAAAAATGAGTGTCGTGGTACCTAGAGAGGACTTTGTAGGGTGATCGTGAGTATATTCTTGTGTGAAAATAGTGAGAAATTGATTGGAGCCGATCTTTATTGTATTAAAATAGAAAGTGATCGTGAGTATATTTCTGCATGTGATTCTTGTTTGATCATGCATTTCTTTTTGTGTATCTCTCTCCACTGATTTGAATTAATGATCTTTTAGAAGAAGTCACTGAGCAGAGGGAAACACGAAGCTCTGCAGCATCCAACAACGGTACTTTTTGTTGAGGTTTACCATAAATCTCGCAAGATGGTAAAGGTATGTTTCTTCTTTCATTAACAGTTTATATAATGGTTTGGTAGAAATAAATAATTGTTGACGAAGATCTAGTCAAATAATGATTAAGAAACAGTGATCACATCTTTACTATTTCTAGGTAGCAAATTTTTGTTTCATTTACTGACCTAGTGGTAAAAAATAAAGGTGTTGGAACCACCGTCGATAGTCTAGTGGTAAAAAAGGTCTTAAGAAACCGGAAAATTGTAGGTTCAATTCATTATGGCCCTCTACCGAGGAATTAATTTCCTACGAGTTACCTGGACATCCAAATGTTACAAGGTCTGGCAATATATTCCGTGAGAATGGTTGAAAAAACAAATAAATATACAAAAAAGAACAAGGGCATTGATAATCATAAAATGCTTAGAGGAATGAGTTCACTTCATGGCAGCCACTTGCTTAGACATTGTGTTATACAAGTTATCTTGACAATTGAATGTAGTAGGGAATGAGTTCAATTGGTGATCATATGCTTATAAATTGATTTCACACAAGTTACCTTGACAACTGAATGTAGTTGGGAATAAGTTCAATTCATGATGGTCACTTGCTTAGAAATTGATTTCACACAAGTTACCTTGACAACCGAACGTAGTAGGGTCAAACAGTTGCCCTGTGAGAATAATCAAGGTGTACATAAGCTTGAATGCCCACGAATAAAAAAAAATCTAGTTAAGGTACTTTCTTGCAGTGCACCTATGTGCAGTTTTTCTTATTTGTGTAGGGTAATTTTTTTTTCCTGGTTATTGATAGGGACTTGTGTTTTTGACCTTCTGGTTTCATTCTTCTTTACAGACACAAGAATTTTTGGTCCTTGGACGACAAACATTAGCAGAACTAAAGGACAAGATTTATTGCTCGACGGATAAGCTAATGGAAAAGGCTGGGCAGCAAGATTCATCAGGATATTTCCTCATAGAAGTAAGGATTTCAATGAACCCTGTATTTCCCAAATTTGATTTAAAATAAACTGATTCAGTTTTGTTTATATCCAGGATGTATTCTGCAATGATTTGAGGGATCCTTCCTCAATAGATTATAGCAAACCTATATTTGATTGGCTTAAAAACTCAGAGGATGAAGCTCGTAAGAAATGGGAATGCATCGTAACTGGTGAATCACAACAGAAAAACTCGGTTGTCGGCGGAGTATCAGTTTCACATGTTCCTCACTTTAGATCAGTCAGCATGAACAGGGTTCGATTTTGTGATCTGAAATTTAGGCTCGGGGTTGGGTATCTGTACTGTCATCAGGTATGATTTTGTTTTTCATGTTCATTTTGCATTGATGATTTACTATGTACTGACCTGACCCTTAGGCCTTGACCTCAGCTCTTCAAAGCTTGCATTATTATTATTATTATTTTAATTCAACAATAGGGTGGGAGAATTTAAACTTATGACTTCAGGGTCATAAGTCACTTTTTTTTTAATATATTTTTTATATCCGTGAGCGTTGGGGCCAGCTTACATGCACCTAGACTATTTTTACGGGATATACTATTTGACCCTACAACATTTAGATATCAAGGAAGTCCGTACGGAATTAATTTCTAGGTAAGTGTCTATCAAAGATTGAATTCAGTCTTAGTTCTCCAAGATCCTCTTGACCACTAGACTACTCCATGATGGTTTGGTCACAAGCCATCATGCCATTGCTAGTTATGCCAGATGAGTTATGTTCATGTTGGCTAGCTTACGTCATCTTGTGTCCGACTCTCATTTCAAAATAAACCAGTCACTTGATGTTCTGGGTCCTCCTCAAGAGAGTTGTGTAATTCAGTGTTTTAAATGGCGTGCGCCTAGGCGCACCCCTAGTGCCTCGCCTGGAAAAGGCGAGGCGCGGTCAATTAGACGCGCGCCTTTTGGCGCCTTACATGAAGCCCCGGGCGCCAAAAGGCGCGCGCCTTGTGGACTTTTAGACCCCTGTACTAGTCATTCGAAGCGCGACATAACTGATTCAAGACATTTCAATACCTTAAATAACTTAATTTTTCAACTCACAAAACACAACATTCCCTTAAAATGAAAGGTTAATAGTTGAATCTTATGTATATTTTGTATAGATTGTTAGTTAAACTTCATTTCTATCCATGAAATTAAGCTTAATAGTTAAATGTAATGTATGTTTTATATATTATTCTTGGTTAAAACTTCATTTAATTTTTTTTGTGTTTTTTTATATAGTTATAGTTTGCCTTATGTAAAAAAGCCCACGCCTTTTGGTGCGCCTCCGGCCTCAGAGACCTATTGTGCTTTAGTGCACCTTGGGCTTTTTAAAGCACTTGTGTAATTTTCTTTCTGTATACTTCCTGCATGGGAAATTGTTTGAGGTGGCTGCAATGTAGTTGATGGTTTTATACAGAAAAACAAAAAGTTACTGTTTATCCACACATTCAAAGGTTTAGATGGGGCACTTGTCATGTGGCGGTTGCATTGAATAATTTTTCTTTAGGAGAGCTTTATATATCTCATTAATAAATGAAATATACTGTTTCTTGTTCATAAACAAAAAACTGCATCGACTTTGAAGGAATCCTCGTTTTATAGGGAGAATGCAAGCATACCATAGTGATTAGAGACATGAGGTTGATCCATCCTGAGGACGTACACGATCGTGCTGCTTATCCAATCGTTACATTTCAACTTAGGACCCGAGTTCAGAAATGCGGTGTCTGTAACATCTACCGGGCTAAAAAGGTGACTCTCGATGATAAATGGGCACAGGAAAACCCGTGCTACTTTTGTGAAGACTGCTATTTTCTTCTTCACTACTCTAAAGAAGGGAACCTCCTTTACAACGATTTCGTGGTGCACGATTACTTGCCCGAGTAGGCGTGCTAGGATGTATAGGACTGCTTCATGAAATGCCTTGGGCATATTCATTCTGCCATTGATGACGATGAGCTGGTTGAGGTTTTCTAAAGTAGTCTAATTCCAGCCACTTTTGGTTGTTGCAGAAACTCCAAAAATAGAGCCCAAAGGTAAATAGTCACAAAGTTTTCTACTTGCATTCTTCATAGTTTGACTAAATAATTCATTTACATTATTCTTTTGGGGAATTATACTCTTTAGAGTTTACACTCAGGTAATACTAATTGAC

mRNA sequence

AAAAGGTAAACAAAAAGCCGTAACTTCTCAGCACAGCCGCCCCTTTCTCACGCATCTCTTTTTCAGTCTCTTCATCGCTTTCTCTCTGTATGCAAACCTATTTTCTGTGCTATTCATCTTCGATGACTCTTAGATAGTAAAAAAGGTGAGGATTCTTCAACACATATACAAGGGATATGAGTTACTCTCCTCGTTATCAATTGATTTTGTGGAACCCCATATTCTCTGTTTTTGATAATCTTGCTTGTGCTCGTCCCAAAGCCTCGACTCAAGAGACAGCAAAATATTTTACAATTGGGTTTCGAACCTGAGACCTAGAGCATACTTGAAGACAGTAAGTTTCTACGAACGAGGCTGCCATTTGGGGATCATTTCGAACGAGCATCTAATCAACCATTCCGGGTCAAGAAACTGCTTAAGTATTTGGAAGGAGGAGAGCCATGGAGGCAAGAAGCGCGGCGGGCGCCTCGGAGGAGTTGACTCTCAATGGCAATGGCAATGGCAATGGCCTCTCAATTCCCTTGGGGGGGCCTCTATATGCATCCAATTTGGTTGGTCCTCTCACCAGGGTCCCTCACTTTGAGTCTTCTCTTCTTCAGGAACTTCAGAGTCTGGAGGCACAGTTACACTTGGATTCATCTCAACTATGTGATGAACATATTTCGGTCGATGAGCTTATGGTGTATACTGAAGAACAGTTATTGAATATGGCTTTGGAGGAATCATCTCAGAGTGATGAGAGTGCTAAAAACCAGCCAAAACTTCCAGAAGAAATTATGAATGCAGGAGAGGCGAGAGCAGATGAAGAGAAAGTTCATGCTCACAATCTGGAGATTGTCCCTGCATCAAATGCCAACAGAAATACAAATAAGACGGCTGCACGGAAGCGAAAAAAGGAGGATGTTTCTAATATTGAGGGTAATTCTCTGGCAAGGGTGGCTGAAATTTTAAAAATTAAACAAAAGCAGGAAGCAGACAGAGCTGCAGTGAAATTGCATGCTTTCAAGTGGAAGAAGGAAATTGCCTGTTCATCATCAGAAAACAAAGAAAGGTTGAAGTCCTTGAGGTCTACGAATCCTTCTGCAAAGGGTCCTCAAAAGAAGTCACTGAGCAGAGGGAAACACGAAGCTCTGCAGCATCCAACAACGGTACTTTTTGTTGAGGTTTACCATAAATCTCGCAAGATGGTAAAGACACAAGAATTTTTGGTCCTTGGACGACAAACATTAGCAGAACTAAAGGACAAGATTTATTGCTCGACGGATAAGCTAATGGAAAAGGCTGGGCAGCAAGATTCATCAGGATATTTCCTCATAGAAGATGTATTCTGCAATGATTTGAGGGATCCTTCCTCAATAGATTATAGCAAACCTATATTTGATTGGCTTAAAAACTCAGAGGATGAAGCTCGTAAGAAATGGGAATGCATCGTAACTGGTGAATCACAACAGAAAAACTCGGTTGTCGGCGGAGTATCAGTTTCACATGTTCCTCACTTTAGATCAGTCAGCATGAACAGGGTTCGATTTTGTGATCTGAAATTTAGGCTCGGGGTTGGGTATCTGTACTGTCATCAGGGAGAATGCAAGCATACCATAGTGATTAGAGACATGAGGTTGATCCATCCTGAGGACGTACACGATCGTGCTGCTTATCCAATCGTTACATTTCAACTTAGGACCCGAGTTCAGAAATGCGGTGTCTGTAACATCTACCGGGCTAAAAAGGTGACTCTCGATGATAAATGGGCACAGGAAAACCCGTGCTACTTTTGTGAAGACTGCTATTTTCTTCTTCACTACTCTAAAGAAGGGAACCTCCTTTACAACGATTTCGTGGTGCACGATTACTTGCCCGAGTAGGCGTGCTAGGATGTATAGGACTGCTTCATGAAATGCCTTGGGCATATTCATTCTGCCATTGATGACGATGAGCTGGTTGAGGTTTTCTAAAGTAGTCTAATTCCAGCCACTTTTGGTTGTTGCAGAAACTCCAAAAATAGAGCCCAAAGGTAAATAGTCACAAAGTTTTCTACTTGCATTCTTCATAGTTTGACTAAATAATTCATTTACATTATTCTTTTGGGGAATTATACTCTTTAGAGTTTACACTCAGGTAATACTAATTGAC

Coding sequence (CDS)

ATGGAGGCAAGAAGCGCGGCGGGCGCCTCGGAGGAGTTGACTCTCAATGGCAATGGCAATGGCAATGGCCTCTCAATTCCCTTGGGGGGGCCTCTATATGCATCCAATTTGGTTGGTCCTCTCACCAGGGTCCCTCACTTTGAGTCTTCTCTTCTTCAGGAACTTCAGAGTCTGGAGGCACAGTTACACTTGGATTCATCTCAACTATGTGATGAACATATTTCGGTCGATGAGCTTATGGTGTATACTGAAGAACAGTTATTGAATATGGCTTTGGAGGAATCATCTCAGAGTGATGAGAGTGCTAAAAACCAGCCAAAACTTCCAGAAGAAATTATGAATGCAGGAGAGGCGAGAGCAGATGAAGAGAAAGTTCATGCTCACAATCTGGAGATTGTCCCTGCATCAAATGCCAACAGAAATACAAATAAGACGGCTGCACGGAAGCGAAAAAAGGAGGATGTTTCTAATATTGAGGGTAATTCTCTGGCAAGGGTGGCTGAAATTTTAAAAATTAAACAAAAGCAGGAAGCAGACAGAGCTGCAGTGAAATTGCATGCTTTCAAGTGGAAGAAGGAAATTGCCTGTTCATCATCAGAAAACAAAGAAAGGTTGAAGTCCTTGAGGTCTACGAATCCTTCTGCAAAGGGTCCTCAAAAGAAGTCACTGAGCAGAGGGAAACACGAAGCTCTGCAGCATCCAACAACGGTACTTTTTGTTGAGGTTTACCATAAATCTCGCAAGATGGTAAAGACACAAGAATTTTTGGTCCTTGGACGACAAACATTAGCAGAACTAAAGGACAAGATTTATTGCTCGACGGATAAGCTAATGGAAAAGGCTGGGCAGCAAGATTCATCAGGATATTTCCTCATAGAAGATGTATTCTGCAATGATTTGAGGGATCCTTCCTCAATAGATTATAGCAAACCTATATTTGATTGGCTTAAAAACTCAGAGGATGAAGCTCGTAAGAAATGGGAATGCATCGTAACTGGTGAATCACAACAGAAAAACTCGGTTGTCGGCGGAGTATCAGTTTCACATGTTCCTCACTTTAGATCAGTCAGCATGAACAGGGTTCGATTTTGTGATCTGAAATTTAGGCTCGGGGTTGGGTATCTGTACTGTCATCAGGGAGAATGCAAGCATACCATAGTGATTAGAGACATGAGGTTGATCCATCCTGAGGACGTACACGATCGTGCTGCTTATCCAATCGTTACATTTCAACTTAGGACCCGAGTTCAGAAATGCGGTGTCTGTAACATCTACCGGGCTAAAAAGGTGACTCTCGATGATAAATGGGCACAGGAAAACCCGTGCTACTTTTGTGAAGACTGCTATTTTCTTCTTCACTACTCTAAAGAAGGGAACCTCCTTTACAACGATTTCGTGGTGCACGATTACTTGCCCGAGTAG

Protein sequence

MEARSAAGASEELTLNGNGNGNGLSIPLGGPLYASNLVGPLTRVPHFESSLLQELQSLEAQLHLDSSQLCDEHISVDELMVYTEEQLLNMALEESSQSDESAKNQPKLPEEIMNAGEARADEEKVHAHNLEIVPASNANRNTNKTAARKRKKEDVSNIEGNSLARVAEILKIKQKQEADRAAVKLHAFKWKKEIACSSSENKERLKSLRSTNPSAKGPQKKSLSRGKHEALQHPTTVLFVEVYHKSRKMVKTQEFLVLGRQTLAELKDKIYCSTDKLMEKAGQQDSSGYFLIEDVFCNDLRDPSSIDYSKPIFDWLKNSEDEARKKWECIVTGESQQKNSVVGGVSVSHVPHFRSVSMNRVRFCDLKFRLGVGYLYCHQGECKHTIVIRDMRLIHPEDVHDRAAYPIVTFQLRTRVQKCGVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLPE

Homology

[Close]

BLAST of Sed0026896 vs. NCBI nr
Match: XP_022927319.1 (snRNA-activating protein complex subunit [Cucurbita moschata] >XP_022927320.1 snRNA-activating protein complex subunit [Cucurbita moschata] >KAG7019430.1 snRNA-activating protein complex subunit [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 769.2 bits (1985), Expect = 2.0e-218
Identity = 393/471 (83.44%), Postives = 423/471 (89.81%), Query Frame = 0


Query: 1   MEARSAAGASEELTLNGNGNGNGLSIPLGGPLYASNLVGPLTRVPHFESSLLQELQSLEA 60
           MEAR + GASEEL L    N NGLSIPLGGP+YA NLVGPLTRVPHFESSLLQELQSLE 
Sbjct: 1   MEARDSPGASEELAL----NDNGLSIPLGGPIYAPNLVGPLTRVPHFESSLLQELQSLEV 60

Query: 61  QLHLDSSQLCDEHISVDELMVYTEEQLLNMALEESSQSDESAKNQPKLPEEIMNAGEARA 120
            LH+DSSQLCDE IS+DEL V+TEEQLLNMALEESSQ++E   NQP+L EE +NA  ARA
Sbjct: 61  ALHMDSSQLCDEDISIDELKVFTEEQLLNMALEESSQNNECLNNQPELREENLNARVARA 120

Query: 121 DEEKVHAHNLEIVPASNANRNTNKTAARKRKKEDVSNIEGNSLARVAEILKIKQKQEADR 180
           DEE+V+ HNLE  PA NANR+TNK   RKRK+E  S+IE NS+A+VAEI+KIKQKQ+ADR
Sbjct: 121 DEEEVNGHNLEAAPAPNANRSTNKVTRRKRKQEKTSDIEENSIAKVAEIIKIKQKQDADR 180

Query: 181 AAVKLHAFKWKKEIACSSSENKERLKSLRSTNPSAKGPQKKSLSRGKHEALQHPTTVLFV 240
           AAVKLHAF  KKEIA SSSE KERLKSLRST  SAK PQ KSLS  KHEALQHPTTVLFV
Sbjct: 181 AAVKLHAFNCKKEIA-SSSEKKERLKSLRSTKFSAKVPQVKSLSSVKHEALQHPTTVLFV 240

Query: 241 EVYHKSRKMVKTQEFLVLGRQTLAELKDKIYCSTDKLMEKAGQQDSSGYFLIEDVFCNDL 300
           EVYHKSRKM+KTQEFL LGRQTLAELKDKIYC T+KLMEKAGQ DSSGYFLIEDVFCNDL
Sbjct: 241 EVYHKSRKMMKTQEFLALGRQTLAELKDKIYCVTNKLMEKAGQNDSSGYFLIEDVFCNDL 300

Query: 301 RDPSSIDYSKPIFDWLKNSEDEARKKWECIVTGESQQKNSVVGGVSVSHVPHFRSVSMNR 360
           R+PS+IDYSKPI DWL+NSEDEARKKW CI+TGESQQKNSV+G VSVSHVPHFRSVSM++
Sbjct: 301 RNPSAIDYSKPILDWLRNSEDEARKKWGCIITGESQQKNSVLGEVSVSHVPHFRSVSMSK 360

Query: 361 VRFCDLKFRLGVGYLYCHQGECKHTIVIRDMRLIHPEDVHDRAAYPIVTFQLRTRVQKCG 420
           +RFCDLKFRLG GYLYCHQG+CKHTIVIRDMRLIHPEDVHDRAAYPIVTFQLRTRVQKC 
Sbjct: 361 IRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRAAYPIVTFQLRTRVQKCD 420

Query: 421 VCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYL 472
           VCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDY+
Sbjct: 421 VCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYV 466

[Close]

BLAST of Sed0026896 vs. NCBI nr
Match: KAG6583805.1 (snRNA-activating protein complex subunit, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 767.3 bits (1980), Expect = 7.7e-218
Identity = 392/471 (83.23%), Postives = 422/471 (89.60%), Query Frame = 0


Query: 1   MEARSAAGASEELTLNGNGNGNGLSIPLGGPLYASNLVGPLTRVPHFESSLLQELQSLEA 60
           MEAR + GASEEL L    N NGLSIPLGGP+YA NLVGPLTRVPHFESSLLQELQSLE 
Sbjct: 1   MEARDSPGASEELAL----NDNGLSIPLGGPIYAPNLVGPLTRVPHFESSLLQELQSLEV 60

Query: 61  QLHLDSSQLCDEHISVDELMVYTEEQLLNMALEESSQSDESAKNQPKLPEEIMNAGEARA 120
            LH+DSSQLCDE IS+DEL V+TEEQLLNMALEES Q++E   NQP+L EE +NA  ARA
Sbjct: 61  ALHMDSSQLCDEDISIDELKVFTEEQLLNMALEESPQNNECLNNQPELREENLNARVARA 120

Query: 121 DEEKVHAHNLEIVPASNANRNTNKTAARKRKKEDVSNIEGNSLARVAEILKIKQKQEADR 180
           DEE+V+ HNLE  PA NANR+TNK   RKRK+E  S+IE NS+A+VAEI+KIKQKQ+ADR
Sbjct: 121 DEEEVNGHNLEAAPAPNANRSTNKVTRRKRKQEKTSDIEENSIAKVAEIIKIKQKQDADR 180

Query: 181 AAVKLHAFKWKKEIACSSSENKERLKSLRSTNPSAKGPQKKSLSRGKHEALQHPTTVLFV 240
           AAVKLHAF  KKEIA SSSE KERLKSLRST  SAK PQ KSLS  KHEALQHPTTVLFV
Sbjct: 181 AAVKLHAFNCKKEIA-SSSEKKERLKSLRSTKFSAKVPQVKSLSSVKHEALQHPTTVLFV 240

Query: 241 EVYHKSRKMVKTQEFLVLGRQTLAELKDKIYCSTDKLMEKAGQQDSSGYFLIEDVFCNDL 300
           EVYHKSRKM+KTQEFL LGRQTLAELKDKIYC T+KLMEKAGQ DSSGYFLIEDVFCNDL
Sbjct: 241 EVYHKSRKMMKTQEFLALGRQTLAELKDKIYCVTNKLMEKAGQNDSSGYFLIEDVFCNDL 300

Query: 301 RDPSSIDYSKPIFDWLKNSEDEARKKWECIVTGESQQKNSVVGGVSVSHVPHFRSVSMNR 360
           R+PS+IDYSKPI DWL+NSEDEARKKW CI+TGESQQKNSV+G VSVSHVPHFRSVSM++
Sbjct: 301 RNPSAIDYSKPILDWLRNSEDEARKKWGCIITGESQQKNSVLGEVSVSHVPHFRSVSMSK 360

Query: 361 VRFCDLKFRLGVGYLYCHQGECKHTIVIRDMRLIHPEDVHDRAAYPIVTFQLRTRVQKCG 420
           +RFCDLKFRLG GYLYCHQG+CKHTIVIRDMRLIHPEDVHDRAAYPIVTFQLRTRVQKC 
Sbjct: 361 IRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRAAYPIVTFQLRTRVQKCD 420

Query: 421 VCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYL 472
           VCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDY+
Sbjct: 421 VCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYV 466

[Close]

BLAST of Sed0026896 vs. NCBI nr
Match: XP_016901523.1 (PREDICTED: snRNA-activating protein complex subunit-like [Cucumis melo] >XP_016901524.1 PREDICTED: snRNA-activating protein complex subunit-like [Cucumis melo])

HSP 1 Score: 767.3 bits (1980), Expect = 7.7e-218
Identity = 388/473 (82.03%), Postives = 423/473 (89.43%), Query Frame = 0


Query: 1   MEARSAAGASEELTLNGNGNGNGLSIPLGGPLYASNLVGPLTRVPHFESSLLQELQSLEA 60
           MEAR  AGASEE+ L    NG+GLSIPLGGP+YA NLVGPLTRVPHFESS++QE QSLEA
Sbjct: 26  MEARDRAGASEEIGL----NGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSLEA 85

Query: 61  QLHLDSSQLCDEHISVDELMVYTEEQLLNMALEESSQSDESAKNQPKLPEEIMNAGEARA 120
           +LHLDSSQLCDE IS+DEL ++TEEQLLNMALEES QSD +A NQ +LPEE MNAG  R 
Sbjct: 86  ELHLDSSQLCDEDISIDELKLFTEEQLLNMALEESLQSDGNANNQSELPEENMNAGLLRE 145

Query: 121 DEEKVHAHNLEIVPASNANRNTNKTAARKRKKEDVSNIEGNSLARVAEILKIKQKQEADR 180
            EE+V+ HNLE  PASNANR+TNK   RKRKKE++S IE  S+A+VAEI+K+KQKQEADR
Sbjct: 146 CEEEVNGHNLEADPASNANRSTNKMTTRKRKKEELSIIEEKSIAKVAEIVKLKQKQEADR 205

Query: 181 AAVKLHAFKWKKEIACSSSENKERLKSLRSTNPSAKGPQKKSLSRGKHEALQHPTTVLFV 240
           A V+LHAFKWKK+IA SSSE+KERLKSLRSTN SAK P  KSLS  KHE+L HPTTVLFV
Sbjct: 206 AVVQLHAFKWKKDIASSSSESKERLKSLRSTNSSAKVPHVKSLSGEKHESLHHPTTVLFV 265

Query: 241 EVYHKSRKMVKTQEFLVLGRQTLAELKDKIYCSTDKLMEKAGQQDSSGYFLIEDVFCNDL 300
           EVYHKSRKMVK+QEFL LGRQTLAELKDKIYCSTD LM+KA  QDSSGYFL+EDVFCNDL
Sbjct: 266 EVYHKSRKMVKSQEFLALGRQTLAELKDKIYCSTDALMQKAELQDSSGYFLVEDVFCNDL 325

Query: 301 RDPSSIDYSKPIFDWLKNSEDEARKKWECIVTGESQQKNSVVGGVSVSHVPHFRSVSMNR 360
           R+PS+IDYSKPI DWL+NSEDEARKKWECI+TGESQQKNSVVG VS  HVPHFRSVSM++
Sbjct: 326 RNPSAIDYSKPILDWLRNSEDEARKKWECIITGESQQKNSVVGEVSDLHVPHFRSVSMSK 385

Query: 361 VRFCDLKFRLGVGYLYCHQGECKHTIVIRDMRLIHPEDVHDRAAYPIVTFQLRTRVQKCG 420
           VRFCDLKFRLG GYLYCHQG+CKHTIVIRDMRLIHPEDVHDRAAYPIVTFQLRTR QKC 
Sbjct: 386 VRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRAAYPIVTFQLRTRAQKCD 445

Query: 421 VCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLPE 474
           VCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYL +
Sbjct: 446 VCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD 494

[Close]

BLAST of Sed0026896 vs. NCBI nr
Match: XP_008459094.1 (PREDICTED: snRNA-activating protein complex subunit-like isoform X2 [Cucumis melo])

HSP 1 Score: 766.1 bits (1977), Expect = 1.7e-217
Identity = 386/473 (81.61%), Postives = 422/473 (89.22%), Query Frame = 0


Query: 1   MEARSAAGASEELTLNGNGNGNGLSIPLGGPLYASNLVGPLTRVPHFESSLLQELQSLEA 60
           MEAR  AGAS+E+ L    NG+GLSIPLGGP+YA NLVGPLTRVPHFESS++QE QSLEA
Sbjct: 26  MEARDRAGASDEIGL----NGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSLEA 85

Query: 61  QLHLDSSQLCDEHISVDELMVYTEEQLLNMALEESSQSDESAKNQPKLPEEIMNAGEARA 120
           +LHLDSSQLCDE IS+DEL ++TEEQLLNMALEES QSDE+A NQ +LPEE MNAG  R 
Sbjct: 86  ELHLDSSQLCDEDISIDELKLFTEEQLLNMALEESLQSDENANNQSELPEENMNAGLLRE 145

Query: 121 DEEKVHAHNLEIVPASNANRNTNKTAARKRKKEDVSNIEGNSLARVAEILKIKQKQEADR 180
            EE+V+ HNLE  PASNANR+TNK   RKRKKE++S IE  S+A+VAEI K+KQKQEADR
Sbjct: 146 CEEEVNGHNLEADPASNANRSTNKMTTRKRKKEELSIIEEKSIAKVAEIAKLKQKQEADR 205

Query: 181 AAVKLHAFKWKKEIACSSSENKERLKSLRSTNPSAKGPQKKSLSRGKHEALQHPTTVLFV 240
           A V+LHAFKWKK+IA SSSE+KERLKSLRSTN SAK P  KSL+ GKHE+L HP TVLFV
Sbjct: 206 AVVQLHAFKWKKDIASSSSESKERLKSLRSTNTSAKVPHVKSLNDGKHESLHHPMTVLFV 265

Query: 241 EVYHKSRKMVKTQEFLVLGRQTLAELKDKIYCSTDKLMEKAGQQDSSGYFLIEDVFCNDL 300
           EVYHKSRKMVK+QEFL LGRQTLAELKDKIYCSTD LM+KA QQDSSGYFL+EDVFCNDL
Sbjct: 266 EVYHKSRKMVKSQEFLALGRQTLAELKDKIYCSTDTLMQKAEQQDSSGYFLVEDVFCNDL 325

Query: 301 RDPSSIDYSKPIFDWLKNSEDEARKKWECIVTGESQQKNSVVGGVSVSHVPHFRSVSMNR 360
           R+PS+IDYSKPI DWL+NSEDEARKKWECI+TGE QQKNSVVG VS  HVPHFRSVSM++
Sbjct: 326 RNPSAIDYSKPILDWLRNSEDEARKKWECIITGELQQKNSVVGEVSDLHVPHFRSVSMSK 385

Query: 361 VRFCDLKFRLGVGYLYCHQGECKHTIVIRDMRLIHPEDVHDRAAYPIVTFQLRTRVQKCG 420
           VRFCDLKFRLG GYLYCHQG+CKHTIVIRDMRLIHPEDVHDRAAYPIVTFQLRTR QKC 
Sbjct: 386 VRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRAAYPIVTFQLRTRAQKCD 445

Query: 421 VCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLPE 474
           VCNIYRAKK TLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYL +
Sbjct: 446 VCNIYRAKKFTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD 494

[Close]

BLAST of Sed0026896 vs. NCBI nr
Match: XP_023519552.1 (snRNA-activating protein complex subunit [Cucurbita pepo subsp. pepo] >XP_023519553.1 snRNA-activating protein complex subunit [Cucurbita pepo subsp. pepo])

HSP 1 Score: 765.4 bits (1975), Expect = 2.9e-217
Identity = 391/471 (83.01%), Postives = 422/471 (89.60%), Query Frame = 0


Query: 1   MEARSAAGASEELTLNGNGNGNGLSIPLGGPLYASNLVGPLTRVPHFESSLLQELQSLEA 60
           MEAR + GASEEL L    N NGLSIPLGGP+YA NLVGPLTRVPHFESSLLQELQSLE 
Sbjct: 1   MEARDSPGASEELAL----NDNGLSIPLGGPIYAPNLVGPLTRVPHFESSLLQELQSLEV 60

Query: 61  QLHLDSSQLCDEHISVDELMVYTEEQLLNMALEESSQSDESAKNQPKLPEEIMNAGEARA 120
            LH+DSSQLCDE IS+DEL V+TEEQLLNMALEESSQ++E   NQP+L EE +NA  ARA
Sbjct: 61  ALHMDSSQLCDEDISIDELKVFTEEQLLNMALEESSQNNERLNNQPELREENLNARVARA 120

Query: 121 DEEKVHAHNLEIVPASNANRNTNKTAARKRKKEDVSNIEGNSLARVAEILKIKQKQEADR 180
           DEE+V+ HNLE  PA NANR+TNK   RKRK+E  S+IE NS+A+VAEI+KIKQKQ+ADR
Sbjct: 121 DEEEVNGHNLEAAPAPNANRSTNKVTRRKRKQEKTSDIEENSIAKVAEIVKIKQKQDADR 180

Query: 181 AAVKLHAFKWKKEIACSSSENKERLKSLRSTNPSAKGPQKKSLSRGKHEALQHPTTVLFV 240
           AAVKLHAF  KKEIA SSSE KERLKSLRST  SAK PQ KSLS  KHEALQHPTTVLFV
Sbjct: 181 AAVKLHAFNCKKEIA-SSSEKKERLKSLRSTKFSAKVPQVKSLSSVKHEALQHPTTVLFV 240

Query: 241 EVYHKSRKMVKTQEFLVLGRQTLAELKDKIYCSTDKLMEKAGQQDSSGYFLIEDVFCNDL 300
           EVYHKSRKM+KTQEFL LGRQTLAELKDKIYC T+KLMEKAGQ DSSGYFLIEDVFCNDL
Sbjct: 241 EVYHKSRKMMKTQEFLALGRQTLAELKDKIYCVTNKLMEKAGQNDSSGYFLIEDVFCNDL 300

Query: 301 RDPSSIDYSKPIFDWLKNSEDEARKKWECIVTGESQQKNSVVGGVSVSHVPHFRSVSMNR 360
           R+PS+IDYSKP+ DWL+NSEDEARKKW CI+TGESQQ NSV+G VSVSHVPHFRSVSM++
Sbjct: 301 RNPSAIDYSKPVLDWLRNSEDEARKKWGCIITGESQQINSVLGEVSVSHVPHFRSVSMSK 360

Query: 361 VRFCDLKFRLGVGYLYCHQGECKHTIVIRDMRLIHPEDVHDRAAYPIVTFQLRTRVQKCG 420
           +RFCDLKFRLG GYLYCHQG+CKHTIVIRDMRLIHPEDVHDRAAYPIVTFQLRTRVQKC 
Sbjct: 361 IRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRAAYPIVTFQLRTRVQKCD 420

Query: 421 VCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYL 472
           VCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDY+
Sbjct: 421 VCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYV 466

[Close]

BLAST of Sed0026896 vs. ExPASy Swiss-Prot
Match: Q8L627 (snRNA-activating protein complex subunit OS=Arabidopsis thaliana OX=3702 GN=SRD2 PE=1 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 2.5e-86
Identity = 185/367 (50.41%), Postives = 240/367 (65.40%), Query Frame = 0


Query: 131 EIVPASNANRNTNKTAARKRKKEDVSNIEGNS--------------------LARVAEIL 190
           E+ P+ N + + N  A R ++K  V N E                       L +V ++ 
Sbjct: 16  ELEPSLNVSHHENPLAGRAKRKRTVKNTEVKKRTLKNTEVMKMTEKKTEEAYLVKVEQLA 75

Query: 191 KIKQKQEADRAAVKLHAFKWKKEI---ACSSSENKERLKSLRSTNPSAKGPQKKSLSRGK 250
           K+KQKQE D+AAV LH F    E      +  E  E+++SLR  + +     K S  +G+
Sbjct: 76  KLKQKQEEDKAAVTLHCFSKTSETGKDVVAPPEGFEQMQSLRFIDNNYT-KLKPSDIQGQ 135

Query: 251 HEALQHPTTVLFVEVYHKSRKMVKTQEFLVLGRQTLAELKDKIYCSTDKLMEKAGQQDSS 310
            + L  P  +L VE+Y+ SRK VKTQEFLVLGRQ L ELKD I+C+TD++M+KAG+ D S
Sbjct: 136 VDPL-FPEVILCVEIYN-SRK-VKTQEFLVLGRQMLTELKDNIHCATDQVMQKAGKYDPS 195

Query: 311 GYFLIEDVFCNDLRDPSSIDYSKPIFDWLKNSEDEARKKWECIVTGESQQKNSVVGGVSV 370
           GYFLIEDVF NDLR+PS+ DYS PI DWL NS+DEA KKWEC++TGE Q+K  +V G + 
Sbjct: 196 GYFLIEDVFHNDLRNPSAKDYSYPILDWLWNSKDEALKKWECVLTGELQKKQKLVLGEAK 255

Query: 371 S-HVPHFRSVSMNRVRFCDLKFRLGVGYLYCHQGECKHTIVIRDMRLIHPEDVHDRAAYP 430
           S  +P +R+  M    FCD++FR+G  Y+YCHQG+CKHTIVIRDMR+ HPEDV +RAAYP
Sbjct: 256 SVDLPRYRTADMQSTHFCDIRFRVGASYVYCHQGDCKHTIVIRDMRMSHPEDVQNRAAYP 315

Query: 431 IVTFQLRTRVQKCGVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFV 474
           I+ F  + R+QKCGVC I RA KV +DDKWA EN  YFC+ C+ LLH S+EG  L  DF 
Sbjct: 316 IM-FWPKRRIQKCGVCKIKRASKVAVDDKWASENSSYFCDVCFELLH-SEEGP-LNCDFP 375

[Close]

BLAST of Sed0026896 vs. ExPASy Swiss-Prot
Match: Q5BK68 (snRNA-activating protein complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Snapc3 PE=2 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 9.9e-35
Identity = 86/248 (34.68%), Postives = 126/248 (50.81%), Query Frame = 0


Query: 237 VLFVEVYHKSRKMVKTQEFLVLGRQTLAELKDKIYCSTD--------KLMEKAGQQDS-- 296
           +L+  +++K R+    Q  LVLG Q L EL+D I C +D           ++A +  S  
Sbjct: 182 ILYPVIFNKHREHKPYQTVLVLGSQKLTELRDSICCVSDLQIGGEFSNAPDQAPEHISKD 241

Query: 297 ---SGYFLIEDVFCNDLRDPSSIDYSKPIFDWLKNSEDEARKKWECIVTGESQQKNSVVG 356
              S +F  E  F ND R P   D S+ I +W   S D    K                 
Sbjct: 242 LYKSAFFYFEGTFYNDKRYPECRDLSRTIIEW-SESHDRGYGK----------------- 301

Query: 357 GVSVSHVPHFRSVSMNRVRFCDLKFRLGVGYLYCHQGECKHTIVIRDMRLIHPEDVHDRA 416
                    F++  M    F DL  +LG  YLYCHQG+C+H +VI D+RL+H +D  DR 
Sbjct: 302 ---------FQTARMEDFTFNDLNIKLGFPYLYCHQGDCEHVVVITDIRLVHHDDCLDRT 361

Query: 417 AYPIVTFQLRTRVQKCGVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYN 472
            YP++T +     +KC VC +Y A+ VT +D +A E+PC+FC+ C+ +LHY  EGN L  
Sbjct: 362 LYPLLTKKHWLWTRKCFVCKMYTARWVTNNDTFAPEDPCFFCDVCFRMLHYDSEGNKL-G 401

[Close]

BLAST of Sed0026896 vs. ExPASy Swiss-Prot
Match: Q5E9M5 (snRNA-activating protein complex subunit 3 OS=Bos taurus OX=9913 GN=SNAPC3 PE=2 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.7e-34
Identity = 85/248 (34.27%), Postives = 125/248 (50.40%), Query Frame = 0


Query: 237 VLFVEVYHKSRKMVKTQEFLVLGRQTLAELKDKIYCSTD--------KLMEKAGQQDS-- 296
           +L+  ++HK ++    Q  LVLG Q L EL+D I C +D           ++A +  S  
Sbjct: 187 ILYPVIFHKHKEHKPYQTILVLGSQKLTELRDAICCVSDLQIGGEFSNTPDQAPEHISKD 246

Query: 297 ---SGYFLIEDVFCNDLRDPSSIDYSKPIFDWLKNSEDEARKKWECIVTGESQQKNSVVG 356
              S +F  E  F ND R P   D S+ I +W   S D    K                 
Sbjct: 247 LYKSAFFYFEGTFYNDKRYPECRDLSRTIIEW-SESHDRGYGK----------------- 306

Query: 357 GVSVSHVPHFRSVSMNRVRFCDLKFRLGVGYLYCHQGECKHTIVIRDMRLIHPEDVHDRA 416
                    F++  M    F DL  +LG  YLYCHQG+C+H +VI D+RL+H +D  DR 
Sbjct: 307 ---------FQTAKMEDFTFNDLYIKLGFPYLYCHQGDCEHVVVITDIRLVHHDDCLDRT 366

Query: 417 AYPIVTFQLRTRVQKCGVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYN 472
            YP++  +     +KC VC +Y A+ VT +D +A E+PC+FC+ C+ +LHY  EGN L  
Sbjct: 367 LYPLLIKKHWLWTRKCFVCKMYTARWVTNNDSFAPEDPCFFCDVCFRMLHYDSEGNKL-G 406

[Close]

BLAST of Sed0026896 vs. ExPASy Swiss-Prot
Match: Q4R6Y6 (snRNA-activating protein complex subunit 3 OS=Macaca fascicularis OX=9541 GN=SNAPC3 PE=2 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.7e-34
Identity = 86/248 (34.68%), Postives = 125/248 (50.40%), Query Frame = 0


Query: 237 VLFVEVYHKSRKMVKTQEFLVLGRQTLAELKDKIYCSTD--------KLMEKAGQQDS-- 296
           +L+  ++HK ++    Q  LVLG Q L EL+D I C +D           ++A +  S  
Sbjct: 187 ILYPVIFHKHKEHKPYQTMLVLGSQKLTELRDSIRCVSDLQIGGEFSNTPDQAPEHISKD 246

Query: 297 ---SGYFLIEDVFCNDLRDPSSIDYSKPIFDWLKNSEDEARKKWECIVTGESQQKNSVVG 356
              S +F  E  F ND R P   D S+ I +W   S D    K                 
Sbjct: 247 LYKSAFFYFEGTFYNDKRYPECRDLSRTIIEW-SESHDRGYGK----------------- 306

Query: 357 GVSVSHVPHFRSVSMNRVRFCDLKFRLGVGYLYCHQGECKHTIVIRDMRLIHPEDVHDRA 416
                    F++  M    F DL  +LG  YLYCHQG+C+H IVI D+RL+H +D  DR 
Sbjct: 307 ---------FQTARMEDFTFNDLCIKLGFPYLYCHQGDCEHVIVITDIRLVHHDDCLDRT 366

Query: 417 AYPIVTFQLRTRVQKCGVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYN 472
            YP++  +     +KC VC +Y A+ VT +D +A E+PC+FC+ C+ +LHY  EGN L  
Sbjct: 367 LYPLLIKKHWLWTRKCFVCKMYTARWVTNNDSFAPEDPCFFCDVCFRMLHYDSEGNKL-G 406

[Close]

BLAST of Sed0026896 vs. ExPASy Swiss-Prot
Match: Q9D2C9 (snRNA-activating protein complex subunit 3 OS=Mus musculus OX=10090 GN=Snapc3 PE=1 SV=2)

HSP 1 Score: 148.3 bits (373), Expect = 2.2e-34
Identity = 85/248 (34.27%), Postives = 126/248 (50.81%), Query Frame = 0


Query: 237 VLFVEVYHKSRKMVKTQEFLVLGRQTLAELKDKIYCSTD--------KLMEKAGQQDS-- 296
           +L+  +++K ++    Q  LVLG Q L EL+D I C +D           ++A +  S  
Sbjct: 182 ILYPVIFNKHKEHKPYQTMLVLGSQKLTELRDSICCVSDLQIGGEFSNAPDQAPEHISKD 241

Query: 297 ---SGYFLIEDVFCNDLRDPSSIDYSKPIFDWLKNSEDEARKKWECIVTGESQQKNSVVG 356
              S +F  E  F ND R P   D S+ I +W   S D    K                 
Sbjct: 242 LYKSAFFYFEGTFYNDRRYPECRDLSRTIIEW-SESHDRGYGK----------------- 301

Query: 357 GVSVSHVPHFRSVSMNRVRFCDLKFRLGVGYLYCHQGECKHTIVIRDMRLIHPEDVHDRA 416
                    F++  M    F DL  +LG  YLYCHQG+C+H +VI D+RL+H +D  DR 
Sbjct: 302 ---------FQTARMEDFTFNDLHIKLGFPYLYCHQGDCEHVVVITDIRLVHHDDCLDRT 361

Query: 417 AYPIVTFQLRTRVQKCGVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYN 472
            YP++T +     +KC VC +Y A+ VT +D +A E+PC+FC+ C+ +LHY  EGN L  
Sbjct: 362 LYPLLTKKHWLWTRKCFVCKMYTARWVTNNDTFAPEDPCFFCDVCFRMLHYDSEGNKL-G 401

[Close]

BLAST of Sed0026896 vs. ExPASy TrEMBL
Match: A0A6J1ENK2 (snRNA-activating protein complex subunit OS=Cucurbita moschata OX=3662 GN=LOC111434184 PE=3 SV=1)

HSP 1 Score: 769.2 bits (1985), Expect = 9.8e-219
Identity = 393/471 (83.44%), Postives = 423/471 (89.81%), Query Frame = 0


Query: 1   MEARSAAGASEELTLNGNGNGNGLSIPLGGPLYASNLVGPLTRVPHFESSLLQELQSLEA 60
           MEAR + GASEEL L    N NGLSIPLGGP+YA NLVGPLTRVPHFESSLLQELQSLE 
Sbjct: 1   MEARDSPGASEELAL----NDNGLSIPLGGPIYAPNLVGPLTRVPHFESSLLQELQSLEV 60

Query: 61  QLHLDSSQLCDEHISVDELMVYTEEQLLNMALEESSQSDESAKNQPKLPEEIMNAGEARA 120
            LH+DSSQLCDE IS+DEL V+TEEQLLNMALEESSQ++E   NQP+L EE +NA  ARA
Sbjct: 61  ALHMDSSQLCDEDISIDELKVFTEEQLLNMALEESSQNNECLNNQPELREENLNARVARA 120

Query: 121 DEEKVHAHNLEIVPASNANRNTNKTAARKRKKEDVSNIEGNSLARVAEILKIKQKQEADR 180
           DEE+V+ HNLE  PA NANR+TNK   RKRK+E  S+IE NS+A+VAEI+KIKQKQ+ADR
Sbjct: 121 DEEEVNGHNLEAAPAPNANRSTNKVTRRKRKQEKTSDIEENSIAKVAEIIKIKQKQDADR 180

Query: 181 AAVKLHAFKWKKEIACSSSENKERLKSLRSTNPSAKGPQKKSLSRGKHEALQHPTTVLFV 240
           AAVKLHAF  KKEIA SSSE KERLKSLRST  SAK PQ KSLS  KHEALQHPTTVLFV
Sbjct: 181 AAVKLHAFNCKKEIA-SSSEKKERLKSLRSTKFSAKVPQVKSLSSVKHEALQHPTTVLFV 240

Query: 241 EVYHKSRKMVKTQEFLVLGRQTLAELKDKIYCSTDKLMEKAGQQDSSGYFLIEDVFCNDL 300
           EVYHKSRKM+KTQEFL LGRQTLAELKDKIYC T+KLMEKAGQ DSSGYFLIEDVFCNDL
Sbjct: 241 EVYHKSRKMMKTQEFLALGRQTLAELKDKIYCVTNKLMEKAGQNDSSGYFLIEDVFCNDL 300

Query: 301 RDPSSIDYSKPIFDWLKNSEDEARKKWECIVTGESQQKNSVVGGVSVSHVPHFRSVSMNR 360
           R+PS+IDYSKPI DWL+NSEDEARKKW CI+TGESQQKNSV+G VSVSHVPHFRSVSM++
Sbjct: 301 RNPSAIDYSKPILDWLRNSEDEARKKWGCIITGESQQKNSVLGEVSVSHVPHFRSVSMSK 360

Query: 361 VRFCDLKFRLGVGYLYCHQGECKHTIVIRDMRLIHPEDVHDRAAYPIVTFQLRTRVQKCG 420
           +RFCDLKFRLG GYLYCHQG+CKHTIVIRDMRLIHPEDVHDRAAYPIVTFQLRTRVQKC 
Sbjct: 361 IRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRAAYPIVTFQLRTRVQKCD 420

Query: 421 VCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYL 472
           VCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDY+
Sbjct: 421 VCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYV 466

[Close]

BLAST of Sed0026896 vs. ExPASy TrEMBL
Match: A0A1S4DZX0 (snRNA-activating protein complex subunit-like OS=Cucumis melo OX=3656 GN=LOC103494603 PE=3 SV=1)

HSP 1 Score: 767.3 bits (1980), Expect = 3.7e-218
Identity = 388/473 (82.03%), Postives = 423/473 (89.43%), Query Frame = 0


Query: 1   MEARSAAGASEELTLNGNGNGNGLSIPLGGPLYASNLVGPLTRVPHFESSLLQELQSLEA 60
           MEAR  AGASEE+ L    NG+GLSIPLGGP+YA NLVGPLTRVPHFESS++QE QSLEA
Sbjct: 26  MEARDRAGASEEIGL----NGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSLEA 85

Query: 61  QLHLDSSQLCDEHISVDELMVYTEEQLLNMALEESSQSDESAKNQPKLPEEIMNAGEARA 120
           +LHLDSSQLCDE IS+DEL ++TEEQLLNMALEES QSD +A NQ +LPEE MNAG  R 
Sbjct: 86  ELHLDSSQLCDEDISIDELKLFTEEQLLNMALEESLQSDGNANNQSELPEENMNAGLLRE 145

Query: 121 DEEKVHAHNLEIVPASNANRNTNKTAARKRKKEDVSNIEGNSLARVAEILKIKQKQEADR 180
            EE+V+ HNLE  PASNANR+TNK   RKRKKE++S IE  S+A+VAEI+K+KQKQEADR
Sbjct: 146 CEEEVNGHNLEADPASNANRSTNKMTTRKRKKEELSIIEEKSIAKVAEIVKLKQKQEADR 205

Query: 181 AAVKLHAFKWKKEIACSSSENKERLKSLRSTNPSAKGPQKKSLSRGKHEALQHPTTVLFV 240
           A V+LHAFKWKK+IA SSSE+KERLKSLRSTN SAK P  KSLS  KHE+L HPTTVLFV
Sbjct: 206 AVVQLHAFKWKKDIASSSSESKERLKSLRSTNSSAKVPHVKSLSGEKHESLHHPTTVLFV 265

Query: 241 EVYHKSRKMVKTQEFLVLGRQTLAELKDKIYCSTDKLMEKAGQQDSSGYFLIEDVFCNDL 300
           EVYHKSRKMVK+QEFL LGRQTLAELKDKIYCSTD LM+KA  QDSSGYFL+EDVFCNDL
Sbjct: 266 EVYHKSRKMVKSQEFLALGRQTLAELKDKIYCSTDALMQKAELQDSSGYFLVEDVFCNDL 325

Query: 301 RDPSSIDYSKPIFDWLKNSEDEARKKWECIVTGESQQKNSVVGGVSVSHVPHFRSVSMNR 360
           R+PS+IDYSKPI DWL+NSEDEARKKWECI+TGESQQKNSVVG VS  HVPHFRSVSM++
Sbjct: 326 RNPSAIDYSKPILDWLRNSEDEARKKWECIITGESQQKNSVVGEVSDLHVPHFRSVSMSK 385

Query: 361 VRFCDLKFRLGVGYLYCHQGECKHTIVIRDMRLIHPEDVHDRAAYPIVTFQLRTRVQKCG 420
           VRFCDLKFRLG GYLYCHQG+CKHTIVIRDMRLIHPEDVHDRAAYPIVTFQLRTR QKC 
Sbjct: 386 VRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRAAYPIVTFQLRTRAQKCD 445

Query: 421 VCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLPE 474
           VCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYL +
Sbjct: 446 VCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD 494

[Close]

BLAST of Sed0026896 vs. ExPASy TrEMBL
Match: A0A1S3C9D9 (snRNA-activating protein complex subunit-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498307 PE=3 SV=1)

HSP 1 Score: 766.1 bits (1977), Expect = 8.3e-218
Identity = 386/473 (81.61%), Postives = 422/473 (89.22%), Query Frame = 0


Query: 1   MEARSAAGASEELTLNGNGNGNGLSIPLGGPLYASNLVGPLTRVPHFESSLLQELQSLEA 60
           MEAR  AGAS+E+ L    NG+GLSIPLGGP+YA NLVGPLTRVPHFESS++QE QSLEA
Sbjct: 26  MEARDRAGASDEIGL----NGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQSLEA 85

Query: 61  QLHLDSSQLCDEHISVDELMVYTEEQLLNMALEESSQSDESAKNQPKLPEEIMNAGEARA 120
           +LHLDSSQLCDE IS+DEL ++TEEQLLNMALEES QSDE+A NQ +LPEE MNAG  R 
Sbjct: 86  ELHLDSSQLCDEDISIDELKLFTEEQLLNMALEESLQSDENANNQSELPEENMNAGLLRE 145

Query: 121 DEEKVHAHNLEIVPASNANRNTNKTAARKRKKEDVSNIEGNSLARVAEILKIKQKQEADR 180
            EE+V+ HNLE  PASNANR+TNK   RKRKKE++S IE  S+A+VAEI K+KQKQEADR
Sbjct: 146 CEEEVNGHNLEADPASNANRSTNKMTTRKRKKEELSIIEEKSIAKVAEIAKLKQKQEADR 205

Query: 181 AAVKLHAFKWKKEIACSSSENKERLKSLRSTNPSAKGPQKKSLSRGKHEALQHPTTVLFV 240
           A V+LHAFKWKK+IA SSSE+KERLKSLRSTN SAK P  KSL+ GKHE+L HP TVLFV
Sbjct: 206 AVVQLHAFKWKKDIASSSSESKERLKSLRSTNTSAKVPHVKSLNDGKHESLHHPMTVLFV 265

Query: 241 EVYHKSRKMVKTQEFLVLGRQTLAELKDKIYCSTDKLMEKAGQQDSSGYFLIEDVFCNDL 300
           EVYHKSRKMVK+QEFL LGRQTLAELKDKIYCSTD LM+KA QQDSSGYFL+EDVFCNDL
Sbjct: 266 EVYHKSRKMVKSQEFLALGRQTLAELKDKIYCSTDTLMQKAEQQDSSGYFLVEDVFCNDL 325

Query: 301 RDPSSIDYSKPIFDWLKNSEDEARKKWECIVTGESQQKNSVVGGVSVSHVPHFRSVSMNR 360
           R+PS+IDYSKPI DWL+NSEDEARKKWECI+TGE QQKNSVVG VS  HVPHFRSVSM++
Sbjct: 326 RNPSAIDYSKPILDWLRNSEDEARKKWECIITGELQQKNSVVGEVSDLHVPHFRSVSMSK 385

Query: 361 VRFCDLKFRLGVGYLYCHQGECKHTIVIRDMRLIHPEDVHDRAAYPIVTFQLRTRVQKCG 420
           VRFCDLKFRLG GYLYCHQG+CKHTIVIRDMRLIHPEDVHDRAAYPIVTFQLRTR QKC 
Sbjct: 386 VRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRAAYPIVTFQLRTRAQKCD 445

Query: 421 VCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLPE 474
           VCNIYRAKK TLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYL +
Sbjct: 446 VCNIYRAKKFTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD 494

[Close]

BLAST of Sed0026896 vs. ExPASy TrEMBL
Match: A0A5A7TJ23 (snRNA-activating protein complex subunit-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold110G002240 PE=3 SV=1)

HSP 1 Score: 761.5 bits (1965), Expect = 2.0e-216
Identity = 386/474 (81.43%), Postives = 422/474 (89.03%), Query Frame = 0


Query: 1   MEARSAAGASEELTLNGNGNGNGLSIPLGGPLYASNLVGPLTRVPHFESSLLQEL-QSLE 60
           MEAR  AGAS+E+ L    NG+GLSIPLGGP+YA NLVGPLTRVPHFESS++QE  QSLE
Sbjct: 1   MEARDRAGASDEIGL----NGDGLSIPLGGPIYAPNLVGPLTRVPHFESSVVQEFQQSLE 60

Query: 61  AQLHLDSSQLCDEHISVDELMVYTEEQLLNMALEESSQSDESAKNQPKLPEEIMNAGEAR 120
           A+LHLDSSQLCDE IS+DEL ++TEEQLLNMALEES QSDE+A NQ +LPEE MNAG  R
Sbjct: 61  AELHLDSSQLCDEDISIDELKLFTEEQLLNMALEESLQSDENANNQSELPEENMNAGLLR 120

Query: 121 ADEEKVHAHNLEIVPASNANRNTNKTAARKRKKEDVSNIEGNSLARVAEILKIKQKQEAD 180
             EE+V+ HNLE  PASNANR+TNK   RKRKKE++S IE  S+A+VAEI K+KQKQEAD
Sbjct: 121 ECEEEVNGHNLEADPASNANRSTNKMTTRKRKKEELSIIEEKSIAKVAEIAKLKQKQEAD 180

Query: 181 RAAVKLHAFKWKKEIACSSSENKERLKSLRSTNPSAKGPQKKSLSRGKHEALQHPTTVLF 240
           RA V+LHAFKWKK+IA SSSE+KERLKSLRSTN SAK P  KSL+ GKHE+L HP TVLF
Sbjct: 181 RAVVQLHAFKWKKDIASSSSESKERLKSLRSTNTSAKVPHVKSLNDGKHESLHHPMTVLF 240

Query: 241 VEVYHKSRKMVKTQEFLVLGRQTLAELKDKIYCSTDKLMEKAGQQDSSGYFLIEDVFCND 300
           VEVYHKSRKMVK+QEFL LGRQTLAELKDKIYCSTD LM+KA QQDSSGYFL+EDVFCND
Sbjct: 241 VEVYHKSRKMVKSQEFLALGRQTLAELKDKIYCSTDTLMQKAEQQDSSGYFLVEDVFCND 300

Query: 301 LRDPSSIDYSKPIFDWLKNSEDEARKKWECIVTGESQQKNSVVGGVSVSHVPHFRSVSMN 360
           LR+PS+IDYSKPI DWL+NSEDEARKKWECI+TGE QQKNSVVG VS  HVPHFRSVSM+
Sbjct: 301 LRNPSAIDYSKPILDWLRNSEDEARKKWECIITGELQQKNSVVGEVSDLHVPHFRSVSMS 360

Query: 361 RVRFCDLKFRLGVGYLYCHQGECKHTIVIRDMRLIHPEDVHDRAAYPIVTFQLRTRVQKC 420
           +VRFCDLKFRLG GYLYCHQG+CKHTIVIRDMRLIHPEDVHDRAAYPIVTFQLRTR QKC
Sbjct: 361 KVRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRAAYPIVTFQLRTRAQKC 420

Query: 421 GVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLPE 474
            VCNIYRAKK TLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYL +
Sbjct: 421 DVCNIYRAKKFTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLQD 470

[Close]

BLAST of Sed0026896 vs. ExPASy TrEMBL
Match: A0A6J1KH64 (snRNA-activating protein complex subunit OS=Cucurbita maxima OX=3661 GN=LOC111495217 PE=3 SV=1)

HSP 1 Score: 758.8 bits (1958), Expect = 1.3e-215
Identity = 389/471 (82.59%), Postives = 419/471 (88.96%), Query Frame = 0


Query: 1   MEARSAAGASEELTLNGNGNGNGLSIPLGGPLYASNLVGPLTRVPHFESSLLQELQSLEA 60
           MEAR + GASEEL +    N NGLSIPLGGP+YA NLVGPLTRVPHFESSLLQELQSLE 
Sbjct: 1   MEARDSPGASEELAV----NDNGLSIPLGGPIYAPNLVGPLTRVPHFESSLLQELQSLEV 60

Query: 61  QLHLDSSQLCDEHISVDELMVYTEEQLLNMALEESSQSDESAKNQPKLPEEIMNAGEARA 120
            LH+DSSQLCDE IS+DEL V+TEEQLLNMALEESSQ++E   NQP+  EE +NA  ARA
Sbjct: 61  ALHMDSSQLCDEDISIDELKVFTEEQLLNMALEESSQNNERLNNQPEPREENLNARVARA 120

Query: 121 DEEKVHAHNLEIVPASNANRNTNKTAARKRKKEDVSNIEGNSLARVAEILKIKQKQEADR 180
           DEE+V+ HNLE  PA NANR+TNK   RKRK+E  S+IE NS A+VAEI+KIKQKQ+ADR
Sbjct: 121 DEEEVNGHNLEAAPAPNANRSTNKVTRRKRKQEKTSDIEENSNAKVAEIIKIKQKQDADR 180

Query: 181 AAVKLHAFKWKKEIACSSSENKERLKSLRSTNPSAKGPQKKSLSRGKHEALQHPTTVLFV 240
           AAVKLHAF  KKEI  SSSE KERLKSLRST  SAK PQ KSLS  KHEALQHPTTVLFV
Sbjct: 181 AAVKLHAFNCKKEIT-SSSEKKERLKSLRSTKFSAKVPQVKSLSSVKHEALQHPTTVLFV 240

Query: 241 EVYHKSRKMVKTQEFLVLGRQTLAELKDKIYCSTDKLMEKAGQQDSSGYFLIEDVFCNDL 300
           EVYHKSRKM+KTQEFL LGRQTLAELKDKIYC T+KLMEKAGQ DSSGYFLIEDVFCNDL
Sbjct: 241 EVYHKSRKMMKTQEFLALGRQTLAELKDKIYCVTNKLMEKAGQNDSSGYFLIEDVFCNDL 300

Query: 301 RDPSSIDYSKPIFDWLKNSEDEARKKWECIVTGESQQKNSVVGGVSVSHVPHFRSVSMNR 360
           R+PS+IDYSKPI DWL+NSEDEA KKW CI+TGESQQKNSV+G VSVSHVPHFRSVSM++
Sbjct: 301 RNPSAIDYSKPILDWLRNSEDEACKKWGCIITGESQQKNSVLGEVSVSHVPHFRSVSMSK 360

Query: 361 VRFCDLKFRLGVGYLYCHQGECKHTIVIRDMRLIHPEDVHDRAAYPIVTFQLRTRVQKCG 420
           +RFCDLKFRLG GYLYCHQG+CKHTIVIRDMRLIHPEDVHDRAAYPIVTFQLRTRVQKC 
Sbjct: 361 IRFCDLKFRLGAGYLYCHQGDCKHTIVIRDMRLIHPEDVHDRAAYPIVTFQLRTRVQKCD 420

Query: 421 VCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYL 472
           VCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDY+
Sbjct: 421 VCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYV 466

[Close]

BLAST of Sed0026896 vs. TAIR 10
Match: AT1G28560.1 (snRNA activating complex family protein )

HSP 1 Score: 320.9 bits (821), Expect = 1.8e-87
Identity = 185/367 (50.41%), Postives = 240/367 (65.40%), Query Frame = 0


Query: 131 EIVPASNANRNTNKTAARKRKKEDVSNIEGNS--------------------LARVAEIL 190
           E+ P+ N + + N  A R ++K  V N E                       L +V ++ 
Sbjct: 16  ELEPSLNVSHHENPLAGRAKRKRTVKNTEVKKRTLKNTEVMKMTEKKTEEAYLVKVEQLA 75

Query: 191 KIKQKQEADRAAVKLHAFKWKKEI---ACSSSENKERLKSLRSTNPSAKGPQKKSLSRGK 250
           K+KQKQE D+AAV LH F    E      +  E  E+++SLR  + +     K S  +G+
Sbjct: 76  KLKQKQEEDKAAVTLHCFSKTSETGKDVVAPPEGFEQMQSLRFIDNNYT-KLKPSDIQGQ 135

Query: 251 HEALQHPTTVLFVEVYHKSRKMVKTQEFLVLGRQTLAELKDKIYCSTDKLMEKAGQQDSS 310
            + L  P  +L VE+Y+ SRK VKTQEFLVLGRQ L ELKD I+C+TD++M+KAG+ D S
Sbjct: 136 VDPL-FPEVILCVEIYN-SRK-VKTQEFLVLGRQMLTELKDNIHCATDQVMQKAGKYDPS 195

Query: 311 GYFLIEDVFCNDLRDPSSIDYSKPIFDWLKNSEDEARKKWECIVTGESQQKNSVVGGVSV 370
           GYFLIEDVF NDLR+PS+ DYS PI DWL NS+DEA KKWEC++TGE Q+K  +V G + 
Sbjct: 196 GYFLIEDVFHNDLRNPSAKDYSYPILDWLWNSKDEALKKWECVLTGELQKKQKLVLGEAK 255

Query: 371 S-HVPHFRSVSMNRVRFCDLKFRLGVGYLYCHQGECKHTIVIRDMRLIHPEDVHDRAAYP 430
           S  +P +R+  M    FCD++FR+G  Y+YCHQG+CKHTIVIRDMR+ HPEDV +RAAYP
Sbjct: 256 SVDLPRYRTADMQSTHFCDIRFRVGASYVYCHQGDCKHTIVIRDMRMSHPEDVQNRAAYP 315

Query: 431 IVTFQLRTRVQKCGVCNIYRAKKVTLDDKWAQENPCYFCEDCYFLLHYSKEGNLLYNDFV 474
           I+ F  + R+QKCGVC I RA KV +DDKWA EN  YFC+ C+ LLH S+EG  L  DF 
Sbjct: 316 IM-FWPKRRIQKCGVCKIKRASKVAVDDKWASENSSYFCDVCFELLH-SEEGP-LNCDFP 375

[Close]

BLAST of Sed0026896 vs. TAIR 10
Match: AT1G28560.2 (snRNA activating complex family protein )

HSP 1 Score: 311.6 bits (797), Expect = 1.1e-84
Identity = 190/396 (47.98%), Postives = 253/396 (63.89%), Query Frame = 0


Query: 90  MALEESSQSDESAKNQPKLPEEIMNAGEARADEEKV-HAHNLEIVPASNANRNTNKTAAR 149
           MA++E+   D  ++ +    E  +N    RA  + +       +   +   R    T  +
Sbjct: 1   MAMKEAFPEDYLSQEE---LEPSLNVSHHRASSQYISKVFENPLAGRAKRKRTVKNTEVK 60

Query: 150 KR--KKEDVSNI-----EGNSLARVAEILKIKQKQEADRAAVKLHAFKWKKEI---ACSS 209
           KR  K  +V  +     E   L +V ++ K+KQKQE D+AAV LH F    E      + 
Sbjct: 61  KRTLKNTEVMKMTEKKTEEAYLVKVEQLAKLKQKQEEDKAAVTLHCFSKTSETGKDVVAP 120

Query: 210 SENKERLKSLRSTNPSAKGPQKKSLSRGKHEALQHPTTVLFVEVYHKSRKMVKTQEFLVL 269
            E  E+++SLR  + +     K S  +G+ + L  P  +L VE+Y+ SRK VKTQEFLVL
Sbjct: 121 PEGFEQMQSLRFIDNNYT-KLKPSDIQGQVDPL-FPEVILCVEIYN-SRK-VKTQEFLVL 180

Query: 270 GRQTLAELKDKIYCSTDKLMEKAGQQDSSGYFLIEDVFCNDLRDPSSIDYSKPIFDWLKN 329
           GRQ L ELKD I+C+TD++M+KAG+ D SGYFLIEDVF NDLR+PS+ DYS PI DWL N
Sbjct: 181 GRQMLTELKDNIHCATDQVMQKAGKYDPSGYFLIEDVFHNDLRNPSAKDYSYPILDWLWN 240

Query: 330 SEDEARKKWECIVTGESQQKNSVVGGVSVS-HVPHFRSVSMNRVRFCDLKFRLGVGYLYC 389
           S+DEA KKWEC++TGE Q+K  +V G + S  +P +R+  M    FCD++FR+G  Y+YC
Sbjct: 241 SKDEALKKWECVLTGELQKKQKLVLGEAKSVDLPRYRTADMQSTHFCDIRFRVGASYVYC 300

Query: 390 HQGECKHTIVIRDMRLIHPEDVHDRAAYPIVTFQLRTRVQKCGVCNIYRAKKVTLDDKWA 449
           HQG+CKHTIVIRDMR+ HPEDV +RAAYPI+ F  + R+QKCGVC I RA KV +DDKWA
Sbjct: 301 HQGDCKHTIVIRDMRMSHPEDVQNRAAYPIM-FWPKRRIQKCGVCKIKRASKVAVDDKWA 360

Query: 450 QENPCYFCEDCYFLLHYSKEGNLLYNDFVVHDYLPE 474
            EN  YFC+ C+ LLH S+EG  L  DF V DY+ E
Sbjct: 361 SENSSYFCDVCFELLH-SEEGP-LNCDFPVFDYVHE 386

The following BLAST results are available for this feature:

BLAST of Sed0026896 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022927319.1	2.0e-218	83.44	snRNA-activating protein complex subunit [Cucurbita moschata] >XP_022927320.1 sn...	[more]
KAG6583805.1	7.7e-218	83.23	snRNA-activating protein complex subunit, partial [Cucurbita argyrosperma subsp....	[more]
XP_016901523.1	7.7e-218	82.03	PREDICTED: snRNA-activating protein complex subunit-like [Cucumis melo] >XP_0169...	[more]
XP_008459094.1	1.7e-217	81.61	PREDICTED: snRNA-activating protein complex subunit-like isoform X2 [Cucumis mel...	[more]
XP_023519552.1	2.9e-217	83.01	snRNA-activating protein complex subunit [Cucurbita pepo subsp. pepo] >XP_023519...	[more]

BLAST of Sed0026896 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L627	2.5e-86	50.41	snRNA-activating protein complex subunit OS=Arabidopsis thaliana OX=3702 GN=SRD2...	[more]
Q5BK68	9.9e-35	34.68	snRNA-activating protein complex subunit 3 OS=Rattus norvegicus OX=10116 GN=Snap...	[more]
Q5E9M5	1.7e-34	34.27	snRNA-activating protein complex subunit 3 OS=Bos taurus OX=9913 GN=SNAPC3 PE=2 ...	[more]
Q4R6Y6	1.7e-34	34.68	snRNA-activating protein complex subunit 3 OS=Macaca fascicularis OX=9541 GN=SNA...	[more]
Q9D2C9	2.2e-34	34.27	snRNA-activating protein complex subunit 3 OS=Mus musculus OX=10090 GN=Snapc3 PE...	[more]

BLAST of Sed0026896 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ENK2	9.8e-219	83.44	snRNA-activating protein complex subunit OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A1S4DZX0	3.7e-218	82.03	snRNA-activating protein complex subunit-like OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A1S3C9D9	8.3e-218	81.61	snRNA-activating protein complex subunit-like isoform X2 OS=Cucumis melo OX=3656...	[more]
A0A5A7TJ23	2.0e-216	81.43	snRNA-activating protein complex subunit-like isoform X2 OS=Cucumis melo var. ma...	[more]
A0A6J1KH64	1.3e-215	82.59	snRNA-activating protein complex subunit OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]

BLAST of Sed0026896 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28560.1	1.8e-87	50.41	snRNA activating complex family protein	[more]
AT1G28560.2	1.1e-84	47.98	snRNA activating complex family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022042	snRNA-activating protein complex, subunit 3	PFAM	PF12251	zf-SNAP50_C	coord: 143..360 e-value: 1.6E-72 score: 243.4
IPR022042	snRNA-activating protein complex, subunit 3	PANTHER	PTHR13421	SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 3	coord: 19..360
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..118
None	No IPR available	PANTHER	PTHR13421:SF16	SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 3	coord: 19..360

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0026896.1	Sed0026896.1	mRNA
Sed0026896.2	Sed0026896.2	mRNA
Sed0026896.3	Sed0026896.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042795	snRNA transcription by RNA polymerase II
biological_process	GO:0042796	snRNA transcription by RNA polymerase III
cellular_component	GO:0005634	nucleus
cellular_component	GO:0019185	snRNA-activating protein complex
molecular_function	GO:0003681	bent DNA binding
molecular_function	GO:0001046	core promoter sequence-specific DNA binding
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0001006	RNA polymerase III type 3 promoter sequence-specific DNA binding